AT1G04210

AT1G04210 (E 0.0) leucine-rich repeat family protein protein kinase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0007173
Physical Location & Seq
Forward (+)
1114375 .. 1119739
5365 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04210.1

Sequence Viewer

Length: 3339 bp
ATGGATTCGAAGATCAAAAAGCCTGCTAATTTAATCGAAGACGCAGACATTGATGGGGGTTCCGAGAGTGATTCTACCATTAGTAGCGTTTTAAGTTTGGAAGATGACTCCGTGGTTGATGTTTCTGGTCAAAATCTGGAGTTTTCTCTTCTGGATAATGTCGATGATTCTGTGAAAGGTCTCTACTTCTTCAGGAATGTATTCAATTTGATTCCCAAATCGATTGGAGGGCTTGGGAGATTAAGGAAGCTTAAGTTTTTCAGTAACGAGATCGATTTGTTTCCGCCGGAGTTAGGGAATTTGGTGAATTTGGAGTATCTTCAGGTCAAGATATCGTCACCGGGTTTTGGCGACGGTTTATCGTGGGACAAGCTTAAGGGTTTGAAGGAGCTTGAGCTTACTAAAGTCCCTAAACGATCTTCGGCTTTGACCCTTTTGAGCGAGATTTCTGGGCTCAAGTGTTTGACGAGGCTCTCTGTTTGTCACTTCTCAATTAGATATCTTCCCCCGGAGATTGGATGTCTTAAGAGTCTGGAGTATCTGGATCTCTCCTTTAACAAGATTAAGAGTTTGCCTAACGAGATAGGTTATCTGAGTTCATTAACGTTCTTGAAGGTTGCTCACAACAGACTGATGGAGCTATCACCGGTATTAGCTTTATTACAAAACTTAGAAAGCCTGGACGTATCAAACAACCGATTGACAACTCTGCATCCTCTCGATCTAAACTTGATGCCTCGACTTCAAATTTTAAATTTACGGTACAATAAGCTCCCGAGTTATTGCTGGATTCCCACATGGATACAATGTAATTTTGAAGGGAACTATGAAGAGATGGGGGTTGATACTTGTAGCAGCTCTATGGTTGAAATGGATGTATTTGAAACCCCGTATGAGAACAACGTCATAACTGTTCCTCATAAAGGCTCCCACCGTAACCCATTAAATATGTCAACGGGAATCTCTTCCATCAGTAGATGCTTTTCGGCTCGAAAATCAAGTAAGAGGTGGAAGCGGAGACAATATTACTTCCAGCAAAGGGCAAGGCAAGAACGCTTGAACAACAGCAGGAAATGGAAAGGGGAAGTCCCTCCAGAAGGTTTAAGTCTGAAGATGGAAGTCGAAGAAACTGGGAAACAGGGCATGAAGGTTCCTCAGAACACTGACAGAGGTTCAGTTGATAACAGCTGCTCGGATGAGAATGATAAACTGTTCGAGGAGGCTTCTGTCATTACTTCTGAAGAGGAAGAGAGCAGTCTTAAAGCTGATGTTGTTTCTGACAATTCCCAATGTGTGGAAACCCAATTAACGAGTGAAAGGGATAACTATGAAAGTTGTGAGATCAAGACATCTTCTCCCTCTTCAGGAGATGCACCTGGTACTGTAGACTATAATTCTTCTTCAGAGAGAAAGAAGCCAAATAACAAGTCGAAGCGATGTAGTGAGAAGTATCTAGATAACCCAAAAGGCTCTAAATGCCATAAACTATCTACCGATATTACTAATTTATCGCGCAAATACAGCAGCAACTCATTTTGCAGCACAGAAGATTCTCTTCCTGATGGCTTTTTTGATGCTGGACGTGATAGGCCCTTTATGACTCTTAGTAAATATGAGAAAGTTTTGCCTCTTGATTCACGTGAAGTCATACTCTTGGACAGGGCAAAGGATGAAGTGTTGGATGCAATCACTCTCTCTGCTCGAGCCTTGGTAGCTAGGTTGAAGAAATTGAACTGTTTAACTCCAGATGTAGATCAAGTTTCCATCGACAACTTGCAAGTTGCATCATTTCTTGCCCTTTTTGTTTCGGATCACTTTGGGGGGAGTGACAGAACTGCTATTATCGAAAGAACCCGAAAGGCAGTGTCTGGTACAAACTACCAGAAACCTTTTATTTGCACCTGTTTGACCGGGAACCAAGACGACTTGGCTGCTCTCAACAAACAGGTCTCAACAACGGCTGAAGATGCAATTTTGTCTGATGTGTGTGAAAAATCTCTGCGTTCTATTAAGTCCAAGCGGAACTCTATAGTGGTTCCTCTAGGTAAACTGCAATTTGGCATCTGTAGGCACAGGGCCTTACTTATGAAGTACCTTTGTGATCGCATGGAGCCTCCTGTACCATGTGAACTTGTTAGAGGCTATCTAGATTTCATGCCACATGCCTGGAATATTGTCCCTGTGAAGCAAGGTTCCTCGTGGGTTCGTATGGTAGTTGATGCTTGTCGTCCTCATGATATCAGAGAAGATACAGATCAAGAATATTTCTGCAGGTACATTCCCCTTAATCGGCTAAATGAATCCATTCGCATTAAGGAAAAGTTGGAACCAGGATGTTCTGTTTCTTCTCTGTCAACGGGAAAAGGAGTTGAAAGAGCTAATAGTAGTCTTATCCGATGCAAGCTAGGCTCAACTGAAGCAGTTGTGAAGATGCGCACATTAGAGGTTTCTGGAGCTTCCTTAGATGACATTAGGACTTTTGAGTATACATGCTTAGGAGAAGTACGGATTTTAGGAGCTTTGAAACATGACTGCATTGTGGAGTTATATGGACATGAGATATCGTCCAAGTGGATAACCTCAGAAAATGGAAATGAACATCGAGTATTGCAATCTTCTATTCTGATGGAACACATCAAAGGAGGATCTCTAAAGGGTCACATTGAGAAGCTCTCCGAAGCTGGTAAGCACCATGTCCCCATGGATCTAGCTTTGTCTATTGCAAGAGATATCTCAGGGGCTTTGATGGAGCTGCACTCAAAGGATATAATTCACCGTGACATTAAAAGCGAAAACGTTTTGATCGATCTGGACAATCAAAGTGCAAATGGAGAACCCATTGTGAAGCTTTGTGATTTTGATAGAGCTGTTCCGCTTAGGTCTCACTTGCACGGGTGCTGTATTGCCCATGTGGGAATACCTCCTCCTAATATCTGTGTCGGCACACCACGTTGGATGTCCCCTGAAGTCTTCAGAGCAATGCACGAACAAAACTTTTATGGACTTGAAGTGGATATCTGGTCATTTGGTTGCTTAATCTTCGAGTTGTTGACACTACAAAATCCTTATTTTGATTTATCTGAGCTTCAGATTCATGAATCGCTACAGAATGGCAAAAGACCAAAGCTACCAAAGAAACTAGAGACACTGATCTCTGAAACAGAGGAAGAAGAATCAACGAACAAGCTCTCTGAAGTGTTTGATCTAACCGAATCTGACTTAGACACAATGAGATTTCTGATTGACGTGTTTCACCAGTGCACTGAGGAGTCTCCTTCAGACCGTCTAAACGCAGGAGACCTCCATGAAATGATTCTTTCACGGAAAAAGAGAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 LRR_8 Pkinase

Protein Analysis

1112

Amino Acids

125.16

Weight (kDa)

5.79

Isoelectric Point (pI)

45.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 148 - 255 1.2e-09 Leucine-rich repeat region
LRR_8 PF13855 155 - 211 4.7e-07 Leucine rich repeat
EDR1_CTR1_ARMC3_pept PF14381 656 - 731 6e-12 EDR1/CTR1/ARMC3, peptidase-like
Pkinase PF00069 799 - 1101 1.3e-32 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 831 - 1050 5.7e-23 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 2435
Acc36I ACCTGC 1 cut(s) 2262
AccB7I CCANNNNNTGG 1 cut(s) 1294
AccI GTMKAC 2 cut(s) 1386, 2486
AccII CGCG 1 cut(s) 1513
AciI CCGC 4 cut(s) 284, 1015, 2020, 2873
AclI AACGTT 2 cut(s) 605, 2796
AclWI GGATC 4 cut(s) 552, 1818, 2653, 2712
AcsI RAATTY 4 cut(s) 298, 307, 747, 754
AcvI CACGTG 1 cut(s) 1640
AfaI GTAC 7 cut(s) 764, 1381, 1873, 2093, 2121, 2276, 2505
AfiI CCNNNNNNNGG 9 cut(s) 293, 347, 515, 923, 1039, 1097, 1294, 1364, 2289
AflII CTTAAG 3 cut(s) 251, 374, 524
AflIII ACRYGT 1 cut(s) 3246
AgeI ACCGGT 1 cut(s) 646
AjiI CACGTC 2 cut(s) 1583, 3247
AjnI CCWGG 4 cut(s) 678, 1375, 2165, 2329
Alw21I GWGCWC 1 cut(s) 3263
Alw26I GTCTC 7 cut(s) 185, 1012, 1954, 2886, 3137, 3276, 3291
Alw44I GTGCAC 1 cut(s) 3259
AlwI GGATC 4 cut(s) 552, 1818, 2653, 2712
AlwNI CAGNNNCTG 1 cut(s) 1868
Ama87I CYCGRG 2 cut(s) 775, 1701
AoxI GGCC 2 cut(s) 1589, 2076
ApaLI GTGCAC 1 cut(s) 3259
ApeKI GCWGC 6 cut(s) 855, 1188, 1524, 1539, 1931, 2752
ApoI RAATTY 4 cut(s) 298, 307, 747, 754
ArsI GACNNNNNNTTYG 2 cut(s) 1412, 1444
AsiGI ACCGGT 1 cut(s) 646
Asp700I GAANNNNTTC 4 cut(s) 200, 964, 2304, 3312
AspLEI GCGC 2 cut(s) 1515, 2436
AspS9I GGNCC 2 cut(s) 1590, 2076
AsuC2I CCSGG 3 cut(s) 342, 509, 1912
AsuHPI GGTGA 5 cut(s) 316, 330, 636, 2765, 3245
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 2 cut(s) 775, 1701
BaeGI GKGCMC 1 cut(s) 3263
BanII GRGCYC 1 cut(s) 456
BauI CACGAG 1 cut(s) 2197
BbrPI CACGTG 1 cut(s) 1640
BbsI GAAGAC 2 cut(s) 45, 2962
Bbv12I GWGCWC 1 cut(s) 3263
BbvI GCAGC 6 cut(s) 867, 1175, 1536, 1551, 1918, 2739
BccI CCATC 9 cut(s) 47, 628, 829, 977, 1108, 1556, 1772, 2620, 2740
BceAI ACGGC 1 cut(s) 1974
BcgI CGANNNNNNTGC 2 cut(s) 1913, 1947
BciT130I CCWGG 4 cut(s) 680, 1377, 2167, 2331
BciVI GTATCC 1 cut(s) 795
BcnI CCSGG 3 cut(s) 342, 509, 1912
BcoDI GTCTC 7 cut(s) 185, 1012, 1954, 2886, 3137, 3276, 3291
BfaI CTAG 7 cut(s) 1454, 1716, 2042, 2147, 2405, 2708, 3140
BfmI CTRYAG 5 cut(s) 1383, 2028, 2065, 2269, 3104
BfrI CTTAAG 3 cut(s) 251, 374, 524
BfuAI ACCTGC 1 cut(s) 2262
BfuI GTATCC 1 cut(s) 795
BisI GCNGC 6 cut(s) 856, 1189, 1525, 1540, 1932, 2753
BlsI GCNGC 6 cut(s) 857, 1190, 1526, 1541, 1933, 2754
Bme1390I CCNGG 7 cut(s) 342, 509, 680, 1377, 1912, 2167, 2331
BmeT110I CYCGRG 2 cut(s) 775, 1701
BmgBI CACGTC 2 cut(s) 1583, 3247
BmgT120I GGNCC 2 cut(s) 1590, 2076
BmiI GGNNCC 8 cut(s) 61, 928, 1152, 1916, 2037, 2112, 2194, 2328
BmrFI CCNGG 7 cut(s) 342, 509, 680, 1377, 1912, 2167, 2331
BmrI ACTGGG 1 cut(s) 1140
BmuI ACTGGG 1 cut(s) 1140
BpiI GAAGAC 2 cut(s) 45, 2962
BplI GAGNNNNNCTC 4 cut(s) 2657, 2689, 2741, 2773
BpmI CTGGAG 5 cut(s) 158, 554, 1077, 1728, 2472
Bpu10I CCTNAGC 2 cut(s) 2494, 2876
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 2 cut(s) 413, 440
BpuMI CCSGG 3 cut(s) 342, 509, 1912
Bsa29I ATCGAT 3 cut(s) 221, 273, 2805
BsaAI YACGTR 1 cut(s) 1640
BsaBI GATNNNNATC 2 cut(s) 1752, 2253
BsaI GGTCTC 4 cut(s) 185, 1954, 2886, 3291
BsaJI CCNNGG 4 cut(s) 111, 507, 1707, 2700
BsaWI WCCGGW 1 cut(s) 646
BsaXI ACNNNNNCTCC 2 cut(s) 1339, 1369
Bsc4I CCNNNNNNNGG 9 cut(s) 293, 347, 515, 923, 1039, 1097, 1294, 1364, 2289
Bse118I RCCGGY 1 cut(s) 646
Bse1I ACTGG 2 cut(s) 1135, 3256
Bse3DI GCAATG 1 cut(s) 2985
Bse8I GATNNNNATC 2 cut(s) 1752, 2253
BseBI CCWGG 4 cut(s) 680, 1377, 2167, 2331
BseCI ATCGAT 3 cut(s) 221, 273, 2805
BseDI CCNNGG 4 cut(s) 111, 507, 1707, 2700
BseGI GGATG 8 cut(s) 524, 712, 880, 1201, 1675, 1687, 2339, 2961
BseJI GATNNNNATC 2 cut(s) 1752, 2253
BseLI CCNNNNNNNGG 9 cut(s) 293, 347, 515, 923, 1039, 1097, 1294, 1364, 2289
BseMI GCAATG 1 cut(s) 2985
BseMII CTCAG 6 cut(s) 584, 1169, 2595, 2748, 3072, 3255
BseNI ACTGG 2 cut(s) 1135, 3256
BseRI GAGGAG 3 cut(s) 1232, 2913, 3281
BseSI GKGCMC 1 cut(s) 3263
BseXI GCAGC 6 cut(s) 867, 1175, 1536, 1551, 1918, 2739
BsgI GTGCAG 1 cut(s) 2738
Bsh1236I CGCG 1 cut(s) 1513
BshFI GGCC 2 cut(s) 1591, 2078
BshTI ACCGGT 1 cut(s) 646
BshVI ATCGAT 3 cut(s) 221, 273, 2805
BsiHKAI GWGCWC 1 cut(s) 3263
BsiHKCI CYCGRG 2 cut(s) 775, 1701
BsiSI CCGG 5 cut(s) 287, 341, 509, 647, 1911
BslFI GGGAC 6 cut(s) 380, 392, 1073, 2162, 2681, 2944
BslI CCNNNNNNNGG 9 cut(s) 293, 347, 515, 923, 1039, 1097, 1294, 1364, 2289
BsmAI GTCTC 7 cut(s) 185, 1012, 1954, 2886, 3137, 3276, 3291
BsmFI GGGAC 6 cut(s) 380, 392, 1073, 2162, 2681, 2944
BsnI GGCC 2 cut(s) 1591, 2078
Bso31I GGTCTC 4 cut(s) 185, 1954, 2886, 3291
BsoBI CYCGRG 2 cut(s) 775, 1701
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 2 cut(s) 456, 3263
Bsp19I CCATGG 1 cut(s) 2700
BspACI CCGC 4 cut(s) 284, 1015, 2020, 2873
BspANI GGCC 2 cut(s) 1591, 2078
BspCNI CTCAG 6 cut(s) 585, 1168, 2594, 2747, 3073, 3256
BspDI ATCGAT 3 cut(s) 221, 273, 2805
BspFNI CGCG 1 cut(s) 1513
BspHI TCATGA 2 cut(s) 2233, 3094
BspLI GGNNCC 8 cut(s) 61, 928, 1152, 1916, 2037, 2112, 2194, 2328
BspMAI CTGCAG 1 cut(s) 2273
BspMI ACCTGC 1 cut(s) 2262
BspPI GGATC 4 cut(s) 552, 1818, 2653, 2712
BspT104I TTCGAA 1 cut(s) 8
BspTI CTTAAG 3 cut(s) 251, 374, 524
BspTNI GGTCTC 4 cut(s) 185, 1954, 2886, 3291
BsrDI GCAATG 1 cut(s) 2985
BsrFI RCCGGY 1 cut(s) 646
BsrI ACTGG 2 cut(s) 1135, 3256
BssAI RCCGGY 1 cut(s) 646
BssECI CCNNGG 4 cut(s) 111, 507, 1707, 2700
BssNAI GTATAC 1 cut(s) 2487
BssSI CACGAG 1 cut(s) 2197
BssT1I CCWWGG 2 cut(s) 1707, 2700
Bst1107I GTATAC 1 cut(s) 2487
Bst2BI CACGAG 1 cut(s) 2197
Bst2UI CCWGG 4 cut(s) 680, 1377, 2167, 2331
Bst4CI ACNGT 9 cut(s) 356, 762, 913, 935, 1212, 1384, 1736, 2777, 3284
Bst6I CTCTTC 7 cut(s) 153, 825, 970, 1236, 1242, 1366, 1560
BstAFI CTTAAG 3 cut(s) 251, 374, 524
BstBAI YACGTR 1 cut(s) 1640
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 24, 2402
BstDSI CCRYGG 2 cut(s) 111, 2700
BstENI CCTNNNNNAGG 2 cut(s) 921, 1095
BstF5I GGATG 8 cut(s) 524, 712, 880, 1201, 1675, 1687, 2339, 2961
BstFNI CGCG 1 cut(s) 1513
BstHHI GCGC 2 cut(s) 1515, 2436
BstMAI GTCTC 7 cut(s) 185, 1012, 1954, 2886, 3137, 3276, 3291
BstMWI GCNNNNNNNGC 5 cut(s) 1476, 1521, 1712, 1967, 2406
BstNI CCWGG 4 cut(s) 680, 1377, 2167, 2331
BstNSI RCATGY 2 cut(s) 2165, 2493
BstSCI CCNGG 7 cut(s) 340, 507, 678, 1375, 1910, 2165, 2329
BstSFI CTRYAG 5 cut(s) 1383, 2028, 2065, 2269, 3104
BstSLI GKGCMC 1 cut(s) 3263
BstUI CGCG 1 cut(s) 1513
BstV1I GCAGC 6 cut(s) 867, 1175, 1536, 1551, 1918, 2739
BstV2I GAAGAC 2 cut(s) 45, 2962
BstX2I RGATCY 3 cut(s) 544, 2645, 2704
BstXI CCANNNNNNTGG 1 cut(s) 2166
BstYI RGATCY 3 cut(s) 544, 2645, 2704
BstZ17I GTATAC 1 cut(s) 2487
Bsu15I ATCGAT 3 cut(s) 221, 273, 2805
BsuI GTATCC 1 cut(s) 795
BsuRI GGCC 2 cut(s) 1591, 2078
BsuTUI ATCGAT 3 cut(s) 221, 273, 2805
BtgI CCRYGG 2 cut(s) 111, 2700
BtgZI GCGATG 1 cut(s) 1450
BtrI CACGTC 2 cut(s) 1583, 3247
BtsCI GGATG 8 cut(s) 524, 712, 880, 1201, 1675, 1687, 2339, 2961
BtsI GCAGTG 1 cut(s) 1869
BtsIMutI CAGTG 5 cut(s) 1161, 1869, 3146, 3261, 3263
BveI ACCTGC 1 cut(s) 2262
Cac8I GCNNGC 2 cut(s) 24, 2402
CaiI CAGNNNCTG 1 cut(s) 1868
CciI TCATGA 2 cut(s) 2233, 3094
CfoI GCGC 2 cut(s) 1515, 2436
Cfr10I RCCGGY 1 cut(s) 646
Cfr13I GGNCC 2 cut(s) 1590, 2076
ClaI ATCGAT 3 cut(s) 221, 273, 2805
CseI GACGC 1 cut(s) 50
CsiI ACCWGGT 1 cut(s) 1375
Csp6I GTAC 7 cut(s) 763, 1380, 1872, 2092, 2120, 2275, 2504
CspAI ACCGGT 1 cut(s) 646
CviQI GTAC 7 cut(s) 763, 1380, 1872, 2092, 2120, 2275, 2504
DraI TTTAAA 1 cut(s) 753
Eam1104I CTCTTC 7 cut(s) 153, 825, 970, 1236, 1242, 1366, 1560
EarI CTCTTC 7 cut(s) 153, 825, 970, 1236, 1242, 1366, 1560
EciI GGCGGA 1 cut(s) 273
Eco130I CCWWGG 2 cut(s) 1707, 2700
Eco24I GRGCYC 1 cut(s) 456
Eco31I GGTCTC 4 cut(s) 185, 1954, 2886, 3291
Eco32I GATATC 6 cut(s) 333, 500, 2239, 2562, 2731, 3016
Eco72I CACGTG 1 cut(s) 1640
Eco88I CYCGRG 2 cut(s) 775, 1701
EcoNI CCTNNNNNAGG 2 cut(s) 921, 1095
EcoO109I RGGNCCY 2 cut(s) 1590, 2076
EcoRII CCWGG 4 cut(s) 678, 1375, 2165, 2329
EcoRV GATATC 6 cut(s) 333, 500, 2239, 2562, 2731, 3016
EcoT14I CCWWGG 2 cut(s) 1707, 2700
EcoT38I GRGCYC 1 cut(s) 456
ErhI CCWWGG 2 cut(s) 1707, 2700
FalI AAGNNNNNCTT 2 cut(s) 1539, 1571
FaqI GGGAC 6 cut(s) 380, 392, 1073, 2162, 2681, 2944
FblI GTMKAC 2 cut(s) 1386, 2486
Fnu4HI GCNGC 6 cut(s) 856, 1189, 1525, 1540, 1932, 2753
FokI GGATG 8 cut(s) 531, 699, 887, 1208, 1682, 1694, 2346, 2968
FriOI GRGCYC 1 cut(s) 456
Fsp4HI GCNGC 6 cut(s) 856, 1189, 1525, 1540, 1932, 2753
FspAI RTGCGCAY 1 cut(s) 2435
FspBI CTAG 7 cut(s) 1454, 1716, 2042, 2147, 2405, 2708, 3140
FspI TGCGCA 1 cut(s) 2435
GlaI GCGC 2 cut(s) 1514, 2435
GluI GCNGC 6 cut(s) 856, 1189, 1525, 1540, 1932, 2753
GsuI CTGGAG 5 cut(s) 158, 554, 1077, 1728, 2472
HaeIII GGCC 2 cut(s) 1591, 2078
HapII CCGG 5 cut(s) 287, 341, 509, 647, 1911
HgaI GACGC 1 cut(s) 50
HhaI GCGC 2 cut(s) 1515, 2436
Hin6I GCGC 2 cut(s) 1513, 2434
HinP1I GCGC 2 cut(s) 1513, 2434
HincII GTYRAC 3 cut(s) 954, 2355, 3051
HindII GTYRAC 3 cut(s) 954, 2355, 3051
HindIII AAGCTT 3 cut(s) 248, 371, 2846
HpaII CCGG 5 cut(s) 287, 341, 509, 647, 1911
HphI GGTGA 5 cut(s) 316, 330, 636, 2765, 3245
Hpy166II GTNNAC 8 cut(s) 954, 1387, 2048, 2129, 2355, 2487, 3051, 3261
Hpy8I GTNNAC 8 cut(s) 954, 1387, 2048, 2129, 2355, 2487, 3051, 3261
Hpy99I CGWCG 1 cut(s) 356
HpyAV CCTTC 6 cut(s) 379, 607, 812, 1091, 1141, 3285
HpyCH4III ACNGT 9 cut(s) 356, 762, 913, 935, 1212, 1384, 1736, 2777, 3284
HpyCH4IV ACGT 8 cut(s) 605, 684, 903, 1582, 1639, 2796, 2950, 3246
HpyF10VI GCNNNNNNNGC 5 cut(s) 1476, 1521, 1712, 1967, 2406
HpySE526I ACGT 8 cut(s) 605, 684, 903, 1582, 1639, 2796, 2950, 3246
HspAI GCGC 2 cut(s) 1513, 2434
LmnI GCTCC 8 cut(s) 388, 637, 777, 932, 2110, 2453, 2516, 2749
Lsp1109I GCAGC 6 cut(s) 867, 1175, 1536, 1551, 1918, 2739
MabI ACCWGGT 1 cut(s) 1375
MaeI CTAG 7 cut(s) 1454, 1716, 2042, 2147, 2405, 2708, 3140
MaeII ACGT 8 cut(s) 605, 684, 903, 1582, 1639, 2796, 2950, 3246
MaeIII GTNAC 7 cut(s) 263, 336, 482, 935, 1826, 2657, 2777
MflI RGATCY 3 cut(s) 544, 2645, 2704
MhlI GDGCHC 2 cut(s) 456, 3263
MlyI GAGTC 4 cut(s) 101, 538, 1594, 3278
MmeI TCCRAC 3 cut(s) 1659, 2304, 2933
MroXI GAANNNNTTC 4 cut(s) 200, 964, 2304, 3312
MspA1I CMGCKG 1 cut(s) 1188
MspCI CTTAAG 3 cut(s) 251, 374, 524
MspI CCGG 5 cut(s) 287, 341, 509, 647, 1911
MspR9I CCNGG 7 cut(s) 342, 509, 680, 1377, 1912, 2167, 2331
MvaI CCWGG 4 cut(s) 680, 1377, 2167, 2331
MvnI CGCG 1 cut(s) 1513
MwoI GCNNNNNNNGC 5 cut(s) 1476, 1521, 1712, 1967, 2406
NciI CCSGG 3 cut(s) 342, 509, 1912
NcoI CCATGG 1 cut(s) 2700
NlaIV GGNNCC 8 cut(s) 61, 928, 1152, 1916, 2037, 2112, 2194, 2328
NmuCI GTSAC 5 cut(s) 336, 482, 1826, 2657, 2777
NsbI TGCGCA 1 cut(s) 2435
NspI RCATGY 2 cut(s) 2165, 2493
NspV TTCGAA 1 cut(s) 8
PaeR7I CTCGAG 1 cut(s) 1701
PagI TCATGA 2 cut(s) 2233, 3094
PcsI WCGNNNNNNNCGW 1 cut(s) 2802
PdmI GAANNNNTTC 4 cut(s) 200, 964, 2304, 3312
PflMI CCANNNNNTGG 1 cut(s) 1294
PinAI ACCGGT 1 cut(s) 646
PkrI GCNGC 6 cut(s) 857, 1190, 1526, 1541, 1933, 2754
PleI GAGTC 4 cut(s) 101, 537, 1594, 3277
PmaCI CACGTG 1 cut(s) 1640
PmlI CACGTG 1 cut(s) 1640
PpsI GAGTC 4 cut(s) 101, 537, 1594, 3277
Ppu21I YACGTR 1 cut(s) 1640
Psp1406I AACGTT 2 cut(s) 605, 2796
Psp6I CCWGG 4 cut(s) 678, 1375, 2165, 2329
PspCI CACGTG 1 cut(s) 1640
PspGI CCWGG 4 cut(s) 678, 1375, 2165, 2329
PspN4I GGNNCC 8 cut(s) 61, 928, 1152, 1916, 2037, 2112, 2194, 2328
PspPI GGNCC 2 cut(s) 1590, 2076
PspXI VCTCGAGB 1 cut(s) 1701
PstI CTGCAG 1 cut(s) 2273
PstNI CAGNNNCTG 1 cut(s) 1868
PsuI RGATCY 3 cut(s) 544, 2645, 2704
PvuII CAGCTG 1 cut(s) 1188
RsaI GTAC 7 cut(s) 764, 1381, 1873, 2093, 2121, 2276, 2505
RsaNI GTAC 7 cut(s) 763, 1380, 1872, 2092, 2120, 2275, 2504
SatI GCNGC 6 cut(s) 856, 1189, 1525, 1540, 1932, 2753
Sau96I GGNCC 2 cut(s) 1590, 2076
SchI GAGTC 4 cut(s) 101, 538, 1594, 3278
ScrFI CCNGG 7 cut(s) 342, 509, 680, 1377, 1912, 2167, 2331
SduI GDGCHC 2 cut(s) 456, 3263
SexAI ACCWGGT 1 cut(s) 1375
SfcI CTRYAG 5 cut(s) 1383, 2028, 2065, 2269, 3104
Sfr274I CTCGAG 1 cut(s) 1701
SfuI TTCGAA 1 cut(s) 8
SlaI CTCGAG 1 cut(s) 1701
SmlI CTYRAG 6 cut(s) 251, 374, 392, 455, 524, 1701
SmoI CTYRAG 6 cut(s) 251, 374, 392, 455, 524, 1701
SsiI CCGC 4 cut(s) 284, 1015, 2020, 2873
SspI AATATT 3 cut(s) 1025, 2173, 2264
SspMI CTAG 7 cut(s) 1454, 1716, 2042, 2147, 2405, 2708, 3140
StyD4I CCNGG 7 cut(s) 340, 507, 678, 1375, 1910, 2165, 2329
StyI CCWWGG 2 cut(s) 1707, 2700
TaaI ACNGT 9 cut(s) 356, 762, 913, 935, 1212, 1384, 1736, 2777, 3284
TaiI ACGT 8 cut(s) 608, 687, 906, 1585, 1642, 2799, 2953, 3249
TscAI CASTG 5 cut(s) 1168, 1869, 3153, 3263, 3268
TseFI GTSAC 5 cut(s) 336, 482, 1826, 2657, 2777
TseI GCWGC 6 cut(s) 855, 1188, 1524, 1539, 1931, 2752
Tsp45I GTSAC 5 cut(s) 336, 482, 1826, 2657, 2777
TspGWI ACGGA 3 cut(s) 100, 2521, 3337
TspRI CASTG 5 cut(s) 1168, 1869, 3153, 3263, 3268
Van91I CCANNNNNTGG 1 cut(s) 1294
Vha464I CTTAAG 3 cut(s) 251, 374, 524
VneI GTGCAC 1 cut(s) 3259
XagI CCTNNNNNAGG 2 cut(s) 921, 1095
XapI RAATTY 4 cut(s) 298, 307, 747, 754
XbaI TCTAGA 2 cut(s) 1453, 2146
XceI RCATGY 2 cut(s) 2165, 2493
XhoI CTCGAG 1 cut(s) 1701
XmiI GTMKAC 2 cut(s) 1386, 2486
XmnI GAANNNNTTC 4 cut(s) 200, 964, 2304, 3312
XspI CTAG 7 cut(s) 1454, 1716, 2042, 2147, 2405, 2708, 3140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.