RLG00000010075

Ethylene-responsive protein kinase Le-CTR1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0007173
Physical Location & Seq
Reverse (-)
62758107 .. 62766003
7897 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010075

Sequence Viewer

Length: 3447 bp
ATGCAAGTCCCCAATTCTGAAGAAACCGCCCCAGTAAACCCGCAAACCCCTAAAGACCCCGAAACCTCCGATTCCAATTCGGCAGTGGACGACGATGACAGGTCCGCTGCAGACGACGAGTCGTCGGTTCTCGATGTCTCCGGCAAAAGCTTGGATTTTTCGATTGGGGAGAATTCCGGCGACGGCGTTGGTGCTTTGTATTTGTACAAAAATGTGTATAATTTATTGCCCAAGTCCGTCGGGAGGCTGAAGCGGCTGAGGACGTTGAAGTTTTTCGGGAATGAGATTAATTTGTTCTCTTCGTCGGAGTTTGGGAACTTGGTGGGATTGGAATGCTTGCAGCTCCGGCTATCGTCGCCGGCGTTTGATGGTCTGCCATTGCATAAATTTAAAGGCTTGAAGGAGCTGGAGCTTTCGAAAGTGCCTTCTCGGTCCTCGGCTATACCGATACTGAGTGAGATTGCTAGGCTCAACTGTCTCACCAAGCTCTCTGTTTGTTACTTTTCTATAAGATACCTTCCTCCTGAAATTGGCTGCTTAAGCAAGTTGGAATACCTAGATCTTTCATTCAATAAGATGAAGAGTTTGCCAGCTGAAATTAGTAATTTAAATGCCTTGTTATTGTTAAAAGTTGCCAATAATAAATTATCAGAACTACCTTTGGCTTTGTCCTCGTTGAAAATGTTGGAGAACTTGGACCTGTCGCACAACAGGTTGACATCATTGGGGTCCCTGGATCTTAGCTTGATGCGAAACCTCCAGAATTTAAATCTTCAGCACAACATGCTTCCCGTCTACTGTCAAATACCTTCATGGATATGTTGCAATTTGGAAGGTAATGGAAAAGATATGTCCAACGACGATTTTAGCAGTACCTCAGTTGAAATGGATGTATATGAAACCACCATTCAGAAGAATGATGAAAATCGTTTTCACACAGGGTTTCATCATAGCTCATCGAGTATAGTTGGGCCTTCATCTAACAGTAGATGTTTCACAACTCGGAGATCAGCTGGCCGGTGGAAGCGACAGTTCTTGCAGAGGAGAGCTCGTCAAGAGCGCTTAAATAACAGCAGGAAGTCGAAAGGTCTGGATCTTCCTAAGCTGCACATGAAGGAGGATGAAGACTGCAAACCAGGCAATATAGATGCTACTTTTGAATCATATCGTGAAAGTGCACTGGACATTATAAATTTGGATGATGATAATGATAAAAGTTTACTTTCTGGAGAAGATGGTGTAAACGTCTCCCATGCTGCACATCATGACATGTGTTCGAAGAAGGAGGAGCTTTCTGTAAGAAGTTGCTCATCTCTCAGGGTTAACTCTACTCTAGTAGATAATGGTGATAAAAAGGATTGTTACGAGAGTGATGCATCGTCAACTTCCAATCAAGAGGTTACTGGTGAGCATGATGACGTGCCATATTCAAGAAAATCCAAATGCAGTTCAAAGTCCAAGAGGCGACGAGATGGGGATCTTGATAATAGGAATCTTCAGGATCCCAAACGTTGGAAGTGTGGAGATTGTAGTTCAAGCCTATCTTGCAGAAACATGTCTTGCAAATATAGTAATATGTCATTTTGCAGTGCTGAGGACCATCTTCCAGATGGCTTTTATGATGCAGGACGTGACAGGCCCTTCATGCCACTAGAGAGTTATGAGCAAATTTTCCATCTCGACTCACGTGAAGTTATTCTTGTGGACAGGCTAAGGGATAAAGAGTTGGATGGAATTTTGTGCTCTGCCCGAGATATGGTGTCTCAATTGAAGCAGTTAAATGGTTTAAATACAGATAGAGATCGGGATGATGAGCTACAGATTGCGTTATATCTTGCTCTATTTGTATCAGATCATTTTGGAGGGACTGATAGGGCGGCTTTTGTTGAAAGGAGACGAAGAGCTGGTGGTGGTTCAATATCCAGGAAGCCTTTTGTATGCACCTGCTCAATTAGGAACTCTGAATCTATTAGTTTGAACCCCAAACAGTCTTCGGAGACTGTTGAAGATATTGCCTTTTCTGATATATGTGAGAAATCTCTCCGTTCTATCAAAGCGAGACAAAAATCTGTTGTAGTACCTATAGGAACATTGCAGTTTGGTGTTTGTAGGCATAGAGCATTGCTACTGAAGTACCTATGTGATCGGATGGAACCTCCAGTCCCTTGTGAGCTTGTCAGAGGATACCTGGATTTCATGCCACATGCTTGGAATATTATATCAGTCAAGAAAAATGACTCAACCAAGAGAGGTGACTCAATTAAGGGAGGTGACTTGGTTGAGAGAGATGACTCACGGATTCGCATGGTTGTTGATGCATGTCGTCCACATGATGTAAGAGAGGAGACAGATCCTGAATATTATTGCAGGTATATTCCTCTCAGTCGGGCCAAGGTTTCTTTCTCTGGAAGCAGCCCTACTGATGTTTGTTTGTTTCCTTCATTGTCCTCTTCGGATGAAACTCAAACTGAATCTGGTAGTTCTCTCATTCGGTGTAAATATGGGTCGGCTGACGCAGCAGCAAAGATGCGTACTCTGGAGGTATATGGGACCTCAGTGGATGATATTAGGAACTTTGAATACAGCTGCTTGGGTGAAGTTAGAATTTTAGGTGCTTTGCAACACCCCTGCATAGTAGAGATGTATGGACACAGTATATCATCCAAGTGGGCTCCTTCTATGGATGATAATTCTGGGCACCGTATATTGCAATCTGTAATTTTCATGGAGTATATAAACGGGGGTTCCTTAAAGGGTTACATAGAAAAGCTATCTAAAGCAGGTGAGAAGCATGTCCCTGTGGAGTTAGCTTTAAGCATTGCTAAGAATGTTGCATGTGCACTGGTGGAGTTGCACTCAAAACACATTATTCATCGTGACATAAAAAGTGCAAACATTTTGATTGATATCGATAGGAAGACAGCTGATGGAACACCTGTTGTGAAGCTCTGTGATTTTGATAGGGCAGTGCCTCTCAGCTCGTACTTGCATACATGCTGTATTGCCCATGTTGGGATACCTCCTCCTGATGTTTGTGTTGGAACACCTCGCTGGATGGCTCCAGAGGTTCTGCGGGCAATGCATAAACAAAATATTTATGGATTGGAAGTTGATATCTGGTCGTTTGGATGCCTTCTTTTGGAGATGTTGACTTTGCAGATTCCTTACTTGGGATTATCTGAATTAGAGATTCATGACTGCCTATCGATGGGAAAACGACCCAAGTTAACAGATAACTTGGAGGCGCTTCGGCCATTGGAGAAGCCTGCAATGGCTCAATCTGCTGAAGAGCTTGAGCAAACAGAAGCTGACTTGGATGTACTAAGATTTCTGGTTGACTTATTCTGCCAATGTACTGAGGAGAATCCGCAAAGTCGTCCAACGGCTGACAGCCTCTACAAATTGTTGCTCGAACGCAGCACCCAGTTTACAAGTTCAAAAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EDR1 LRR_8 Pkinase

Protein Analysis

1149

Amino Acids

128.45

Weight (kDa)

5.86

Isoelectric Point (pI)

52.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 119 - 259 7.1e-12 Leucine-rich repeat region
EDR1_CTR1_ARMC3_pept PF14381 674 - 742 2e-11 EDR1/CTR1/ARMC3, peptidase-like
Pkinase PF00069 861 - 1133 1e-35 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 862 - 1133 3.5e-25 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1190
AarI CACCTGC 2 cut(s) 1952, 2771
Acc36I ACCTGC 3 cut(s) 1952, 2358, 2771
AccB1I GGYRCC 1 cut(s) 2697
AccB7I CCANNNNNTGG 1 cut(s) 1512
AccI GTMKAC 1 cut(s) 795
AciI CCGC 7 cut(s) 27, 41, 105, 253, 1877, 3073, 3368
AclI AACGTT 1 cut(s) 1510
AclWI GGATC 6 cut(s) 744, 1101, 1485, 1496, 1509, 2345
AcoI YGGCCR 2 cut(s) 1015, 3251
AcsI RAATTY 7 cut(s) 172, 386, 763, 1192, 1668, 1734, 2604
AcuI CTGAAG 6 cut(s) 39, 269, 758, 1481, 2150, 3306
AcvI CACGTG 1 cut(s) 1688
AfaI GTAC 8 cut(s) 206, 874, 2079, 2135, 2533, 2984, 3321, 3355
AfeI AGCGCT 1 cut(s) 1061
AfiI CCNNNNNNNGG 8 cut(s) 243, 530, 1512, 1756, 3012, 3139, 3170, 3208
AflII CTTAAG 1 cut(s) 538
AflIII ACRYGT 2 cut(s) 1269, 1554
AhdI GACNNNNNGTC 2 cut(s) 118, 121
AjiI CACGTC 2 cut(s) 1420, 1631
AjnI CCWGG 4 cut(s) 732, 1135, 1922, 2187
AjuI GAANNNNNNNTTGG 2 cut(s) 2384, 2416
AloI GAACNNNNNNTCC 2 cut(s) 2145, 2177
Alw21I GWGCWC 4 cut(s) 1051, 1180, 1745, 2842
Alw26I GTCTC 8 cut(s) 142, 482, 1252, 1767, 1888, 1991, 2053, 2339
Alw44I GTGCAC 2 cut(s) 1176, 2838
AlwI GGATC 6 cut(s) 744, 1101, 1485, 1496, 1509, 2345
AlwNI CAGNNNCTG 2 cut(s) 2354, 3308
Ama87I CYCGRG 1 cut(s) 1749
Aor51HI AGCGCT 1 cut(s) 1061
AoxI GGCC 5 cut(s) 971, 1015, 1637, 2388, 3251
ApaLI GTGCAC 2 cut(s) 1176, 2838
ApoI RAATTY 7 cut(s) 172, 386, 763, 1192, 1668, 1734, 2604
AseI ATTAAT 1 cut(s) 288
Asp700I GAANNNNTTC 2 cut(s) 272, 1695
AspLEI GCGC 2 cut(s) 1062, 3247
AspS9I GGNCC 9 cut(s) 102, 432, 697, 729, 971, 1597, 1638, 2388, 2550
AsuHPI GGTGA 7 cut(s) 472, 1358, 1418, 2264, 2282, 2606, 2795
AsuII TTCGAA 2 cut(s) 416, 1277
AvaI CYCGRG 1 cut(s) 1749
AvaII GGWCC 6 cut(s) 102, 432, 697, 729, 1597, 2550
BaeGI GKGCMC 3 cut(s) 1180, 2700, 2842
BaeI ACNNNNGTAYC 2 cut(s) 2117, 2150
BamHI GGATCC 1 cut(s) 1501
BanI GGYRCC 1 cut(s) 2697
BanII GRGCYC 2 cut(s) 1051, 2674
BarI GAAGNNNNNNTAC 2 cut(s) 2401, 2433
BbrPI CACGTG 1 cut(s) 1688
BbsI GAAGAC 3 cut(s) 1131, 1983, 2924
Bbv12I GWGCWC 4 cut(s) 1051, 1180, 1745, 2842
BbvCI CCTCAGC 2 cut(s) 257, 1593
BceAI ACGGC 2 cut(s) 199, 3399
BcgI CGANNNNNNTGC 2 cut(s) 1355, 1389
BciT130I CCWGG 4 cut(s) 734, 1137, 1924, 2189
BciVI GTATCC 2 cut(s) 2177, 3009
BcoDI GTCTC 8 cut(s) 142, 482, 1252, 1767, 1888, 1991, 2053, 2339
BfaI CTAG 4 cut(s) 465, 557, 1334, 1652
BfmI CTRYAG 3 cut(s) 108, 1817, 2082
BfoI RGCGCY 2 cut(s) 1063, 3248
BfrI CTTAAG 1 cut(s) 538
BfuAI ACCTGC 3 cut(s) 1952, 2358, 2771
BfuI GTATCC 2 cut(s) 2177, 3009
BglII AGATCT 1 cut(s) 559
Bme1390I CCNGG 4 cut(s) 734, 1137, 1924, 2189
Bme18I GGWCC 6 cut(s) 102, 432, 697, 729, 1597, 2550
BmeRI GACNNNNNGTC 2 cut(s) 118, 121
BmeT110I CYCGRG 1 cut(s) 1749
BmgBI CACGTC 2 cut(s) 1420, 1631
BmgT120I GGNCC 9 cut(s) 102, 432, 697, 729, 971, 1597, 1638, 2388, 2550
BmiI GGNNCC 9 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746, 3060
BmrFI CCNGG 4 cut(s) 734, 1137, 1924, 2189
BmrI ACTGGG 2 cut(s) 26, 3418
BmsI GCATC 8 cut(s) 738, 1138, 1363, 1385, 1612, 2305, 2517, 3119
BmuI ACTGGG 2 cut(s) 26, 3418
BpiI GAAGAC 3 cut(s) 1131, 1983, 2924
BplI GAGNNNNNCTC 4 cut(s) 1033, 1065, 2840, 2872
BpmI CTGGAG 6 cut(s) 428, 743, 1248, 2142, 2558, 3045
Bpu10I CCTNAGC 4 cut(s) 257, 1101, 1593, 1712
Bpu14I TTCGAA 2 cut(s) 416, 1277
BpuEI CTTGAG 1 cut(s) 3314
Bsa29I ATCGAT 2 cut(s) 2910, 3206
BsaAI YACGTR 1 cut(s) 1688
BsaBI GATNNNNATC 4 cut(s) 924, 1476, 1800, 2906
BsaJI CCNNGG 3 cut(s) 435, 732, 2391
BsaXI ACNNNNNCTCC 2 cut(s) 1036, 1066
Bsc4I CCNNNNNNNGG 8 cut(s) 243, 530, 1512, 1756, 3012, 3139, 3170, 3208
Bse118I RCCGGY 2 cut(s) 358, 1017
Bse1I ACTGG 6 cut(s) 32, 1185, 1408, 2159, 2847, 3424
Bse3DI GCAATG 6 cut(s) 377, 2090, 2120, 2817, 3084, 3276
Bse8I GATNNNNATC 4 cut(s) 924, 1476, 1800, 2906
BseBI CCWGG 4 cut(s) 734, 1137, 1924, 2189
BseCI ATCGAT 2 cut(s) 2910, 3206
BseDI CCNNGG 3 cut(s) 435, 732, 2391
BseJI GATNNNNATC 4 cut(s) 924, 1476, 1800, 2906
BseLI CCNNNNNNNGG 8 cut(s) 243, 530, 1512, 1756, 3012, 3139, 3170, 3208
BseMI GCAATG 6 cut(s) 377, 2090, 2120, 2817, 3084, 3276
BseMII CTCAG 9 cut(s) 248, 443, 891, 1330, 1584, 2395, 2568, 2989, 3348
BseNI ACTGG 6 cut(s) 32, 1185, 1408, 2159, 2847, 3424
BseRI GAGGAG 5 cut(s) 1057, 1301, 2357, 3012, 3374
BseSI GKGCMC 3 cut(s) 1180, 2700, 2842
BsgI GTGCAG 2 cut(s) 1091, 1242
BshFI GGCC 5 cut(s) 973, 1017, 1639, 2390, 3253
BshNI GGYRCC 1 cut(s) 2697
BshVI ATCGAT 2 cut(s) 2910, 3206
BsiHKAI GWGCWC 4 cut(s) 1051, 1180, 1745, 2842
BsiHKCI CYCGRG 1 cut(s) 1749
BsiSI CCGG 5 cut(s) 141, 177, 346, 359, 1018
BslFI GGGAC 5 cut(s) 715, 1879, 2147, 2563, 2780
BslI CCNNNNNNNGG 8 cut(s) 243, 530, 1512, 1756, 3012, 3139, 3170, 3208
BsmAI GTCTC 8 cut(s) 142, 482, 1252, 1767, 1888, 1991, 2053, 2339
BsmBI CGTCTC 2 cut(s) 1252, 1888
BsmFI GGGAC 5 cut(s) 715, 1879, 2147, 2563, 2780
BsmI GAATGC 1 cut(s) 338
BsnI GGCC 5 cut(s) 973, 1017, 1639, 2390, 3253
BsoBI CYCGRG 1 cut(s) 1749
Bsp119I TTCGAA 2 cut(s) 416, 1277
Bsp1286I GDGCHC 6 cut(s) 1051, 1180, 1745, 2674, 2700, 2842
Bsp1407I TGTACA 1 cut(s) 204
BspACI CCGC 7 cut(s) 27, 41, 105, 253, 1877, 3073, 3368
BspANI GGCC 5 cut(s) 973, 1017, 1639, 2390, 3253
BspCNI CTCAG 9 cut(s) 249, 444, 890, 1329, 1585, 2394, 2567, 2988, 3349
BspDI ATCGAT 2 cut(s) 2910, 3206
BspHI TCATGA 2 cut(s) 1264, 3193
BspLI GGNNCC 9 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746, 3060
BspMAI CTGCAG 1 cut(s) 112
BspMI ACCTGC 3 cut(s) 1952, 2358, 2771
BspPI GGATC 6 cut(s) 744, 1101, 1485, 1496, 1509, 2345
BspQI GCTCTTC 2 cut(s) 1894, 3282
BspT104I TTCGAA 2 cut(s) 416, 1277
BspT107I GGYRCC 1 cut(s) 2697
BspTI CTTAAG 1 cut(s) 538
BsrDI GCAATG 6 cut(s) 377, 2090, 2120, 2817, 3084, 3276
BsrFI RCCGGY 2 cut(s) 358, 1017
BsrGI TGTACA 1 cut(s) 204
BsrI ACTGG 6 cut(s) 32, 1185, 1408, 2159, 2847, 3424
BssAI RCCGGY 2 cut(s) 358, 1017
BssECI CCNNGG 3 cut(s) 435, 732, 2391
BssT1I CCWWGG 1 cut(s) 2391
Bst2UI CCWGG 4 cut(s) 734, 1137, 1924, 2189
Bst4CI ACNGT 8 cut(s) 476, 800, 986, 1032, 1989, 2002, 2654, 2702
Bst6I CTCTTC 5 cut(s) 304, 575, 1894, 2455, 3282
BstAFI CTTAAG 1 cut(s) 538
BstAPI GCANNNNNTGC 1 cut(s) 784
BstAUI TGTACA 1 cut(s) 204
BstBAI YACGTR 1 cut(s) 1688
BstBI TTCGAA 2 cut(s) 416, 1277
BstC8I GCNNGC 6 cut(s) 338, 360, 591, 1015, 3075, 3267
BstH2I RGCGCY 2 cut(s) 1063, 3248
BstHHI GCGC 2 cut(s) 1062, 3247
BstMAI GTCTC 8 cut(s) 142, 482, 1252, 1767, 1888, 1991, 2053, 2339
BstNI CCWGG 4 cut(s) 734, 1137, 1924, 2189
BstNSI RCATGY 8 cut(s) 787, 1273, 1558, 2207, 2322, 2795, 2838, 2997
BstSCI CCNGG 4 cut(s) 732, 1135, 1922, 2187
BstSFI CTRYAG 3 cut(s) 108, 1817, 2082
BstSLI GKGCMC 3 cut(s) 1180, 2700, 2842
BstV2I GAAGAC 3 cut(s) 1131, 1983, 2924
BstX2I RGATCY 6 cut(s) 559, 736, 1093, 1477, 1501, 2350
BstXI CCANNNNNNTGG 1 cut(s) 2208
BstYI RGATCY 6 cut(s) 559, 736, 1093, 1477, 1501, 2350
Bsu15I ATCGAT 2 cut(s) 2910, 3206
BsuI GTATCC 2 cut(s) 2177, 3009
BsuRI GGCC 5 cut(s) 973, 1017, 1639, 2390, 3253
BsuTUI ATCGAT 2 cut(s) 2910, 3206
BtrI CACGTC 2 cut(s) 1420, 1631
BtsI GCAGTG 3 cut(s) 90, 1594, 2973
BtsIMutI CAGTG 6 cut(s) 90, 1178, 1594, 2562, 2840, 2973
BveI ACCTGC 3 cut(s) 1952, 2358, 2771
Cac8I GCNNGC 6 cut(s) 338, 360, 591, 1015, 3075, 3267
CaiI CAGNNNCTG 2 cut(s) 2354, 3308
CciI TCATGA 2 cut(s) 1264, 3193
CfoI GCGC 2 cut(s) 1062, 3247
Cfr10I RCCGGY 2 cut(s) 358, 1017
Cfr13I GGNCC 9 cut(s) 102, 432, 697, 729, 971, 1597, 1638, 2388, 2550
ClaI ATCGAT 2 cut(s) 2910, 3206
CseI GACGC 1 cut(s) 2522
Csp6I GTAC 8 cut(s) 205, 873, 2078, 2134, 2532, 2983, 3320, 3354
CviQI GTAC 8 cut(s) 205, 873, 2078, 2134, 2532, 2983, 3320, 3354
DraI TTTAAA 4 cut(s) 391, 609, 768, 1788
DriI GACNNNNNGTC 2 cut(s) 118, 121
EaeI YGGCCR 2 cut(s) 1015, 3251
Eam1104I CTCTTC 5 cut(s) 304, 575, 1894, 2455, 3282
Eam1105I GACNNNNNGTC 2 cut(s) 118, 121
EarI CTCTTC 5 cut(s) 304, 575, 1894, 2455, 3282
Ecl136II GAGCTC 1 cut(s) 1049
Eco130I CCWWGG 1 cut(s) 2391
Eco24I GRGCYC 2 cut(s) 1051, 2674
Eco32I GATATC 2 cut(s) 2908, 3115
Eco47I GGWCC 6 cut(s) 102, 432, 697, 729, 1597, 2550
Eco47III AGCGCT 1 cut(s) 1061
Eco53kI GAGCTC 1 cut(s) 1049
Eco57I CTGAAG 6 cut(s) 39, 269, 758, 1481, 2150, 3306
Eco72I CACGTG 1 cut(s) 1688
Eco88I CYCGRG 1 cut(s) 1749
EcoICRI GAGCTC 1 cut(s) 1049
EcoO109I RGGNCCY 3 cut(s) 729, 1638, 2550
EcoRI GAATTC 1 cut(s) 172
EcoRII CCWGG 4 cut(s) 732, 1135, 1922, 2187
EcoRV GATATC 2 cut(s) 2908, 3115
EcoT14I CCWWGG 1 cut(s) 2391
EcoT22I ATGCAT 3 cut(s) 1378, 2320, 3084
EcoT38I GRGCYC 2 cut(s) 1051, 2674
ErhI CCWWGG 1 cut(s) 2391
Esp3I CGTCTC 2 cut(s) 1252, 1888
FalI AAGNNNNNCTT 4 cut(s) 1528, 1560, 1683, 1715
FaqI GGGAC 5 cut(s) 715, 1879, 2147, 2563, 2780
FauI CCCGC 2 cut(s) 48, 3066
FblI GTMKAC 1 cut(s) 795
FriOI GRGCYC 2 cut(s) 1051, 2674
FspBI CTAG 4 cut(s) 465, 557, 1334, 1652
GlaI GCGC 2 cut(s) 1061, 3246
GsuI CTGGAG 6 cut(s) 428, 743, 1248, 2142, 2558, 3045
HaeII RGCGCY 2 cut(s) 1063, 3248
HaeIII GGCC 5 cut(s) 973, 1017, 1639, 2390, 3253
HapII CCGG 5 cut(s) 141, 177, 346, 359, 1018
HgaI GACGC 1 cut(s) 2522
HhaI GCGC 2 cut(s) 1062, 3247
Hin6I GCGC 2 cut(s) 1060, 3245
HinP1I GCGC 2 cut(s) 1060, 3245
HincII GTYRAC 6 cut(s) 717, 1324, 1383, 3150, 3228, 3337
HindII GTYRAC 6 cut(s) 717, 1324, 1383, 3150, 3228, 3337
HindIII AAGCTT 1 cut(s) 148
HpaI GTTAAC 2 cut(s) 1324, 3228
HpaII CCGG 5 cut(s) 141, 177, 346, 359, 1018
HphI GGTGA 7 cut(s) 472, 1358, 1418, 2264, 2282, 2606, 2795
Hpy99I CGWCG 9 cut(s) 95, 119, 127, 185, 242, 307, 358, 863, 1470
HpyCH4III ACNGT 8 cut(s) 476, 800, 986, 1032, 1989, 2002, 2654, 2702
HpyCH4IV ACGT 6 cut(s) 263, 1245, 1419, 1510, 1630, 1687
HpySE526I ACGT 6 cut(s) 263, 1245, 1419, 1510, 1630, 1687
HspAI GCGC 2 cut(s) 1060, 3245
KflI GGGWCCC 1 cut(s) 729
KroI GCCGGC 1 cut(s) 358
KroNI GCCGGC 1 cut(s) 360
KspAI GTTAAC 2 cut(s) 1324, 3228
LguI GCTCTTC 2 cut(s) 1894, 3282
LmnI GCTCC 6 cut(s) 348, 403, 409, 1288, 2677, 3064
LweI GCATC 8 cut(s) 738, 1138, 1363, 1385, 1612, 2305, 2517, 3119
MaeI CTAG 4 cut(s) 465, 557, 1334, 1652
MaeII ACGT 6 cut(s) 263, 1245, 1419, 1510, 1630, 1687
MaeIII GTNAC 8 cut(s) 497, 1361, 1399, 1631, 2252, 2270, 2756, 2876
MfeI CAATTG 1 cut(s) 1766
MflI RGATCY 6 cut(s) 559, 736, 1093, 1477, 1501, 2350
MhlI GDGCHC 6 cut(s) 1051, 1180, 1745, 2674, 2700, 2842
MlyI GAGTC 5 cut(s) 128, 1676, 2231, 2249, 2285
MmeI TCCRAC 8 cut(s) 285, 528, 666, 879, 1493, 1707, 3019, 3404
Mph1103I ATGCAT 3 cut(s) 1378, 2320, 3084
MreI CGCCGGCG 1 cut(s) 358
MroNI GCCGGC 1 cut(s) 358
MroXI GAANNNNTTC 2 cut(s) 272, 1695
MslI CAYNNNNRTG 2 cut(s) 817, 2665
MspA1I CMGCKG 5 cut(s) 107, 593, 1013, 2586, 2924
MspCI CTTAAG 1 cut(s) 538
MspI CCGG 5 cut(s) 141, 177, 346, 359, 1018
MspR9I CCNGG 4 cut(s) 734, 1137, 1924, 2189
MunI CAATTG 1 cut(s) 1766
Mva1269I GAATGC 1 cut(s) 338
MvaI CCWGG 4 cut(s) 734, 1137, 1924, 2189
NaeI GCCGGC 1 cut(s) 360
NgoMIV GCCGGC 1 cut(s) 358
NlaIV GGNNCC 9 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746, 3060
NmeAIII GCCGAG 1 cut(s) 416
NmuCI GTSAC 4 cut(s) 1631, 2252, 2270, 2876
NsiI ATGCAT 3 cut(s) 1378, 2320, 3084
NspI RCATGY 8 cut(s) 787, 1273, 1558, 2207, 2322, 2795, 2838, 2997
NspV TTCGAA 2 cut(s) 416, 1277
PagI TCATGA 2 cut(s) 1264, 3193
PaqCI CACCTGC 2 cut(s) 1952, 2771
PciI ACATGT 2 cut(s) 1269, 1554
PciSI GCTCTTC 2 cut(s) 1894, 3282
PcsI WCGNNNNNNNCGW 2 cut(s) 359, 443
PctI GAATGC 1 cut(s) 338
PdiI GCCGGC 1 cut(s) 360
PdmI GAANNNNTTC 2 cut(s) 272, 1695
PfeI GAWTC 9 cut(s) 71, 1160, 1492, 1964, 2299, 2471, 3160, 3190, 3364
PflMI CCANNNNNTGG 1 cut(s) 1512
PfoI TCCNGGA 1 cut(s) 1922
PleI GAGTC 5 cut(s) 127, 1676, 2231, 2249, 2285
PmaCI CACGTG 1 cut(s) 1688
PmlI CACGTG 1 cut(s) 1688
PpsI GAGTC 5 cut(s) 127, 1676, 2231, 2249, 2285
Ppu21I YACGTR 1 cut(s) 1688
PpuMI RGGWCCY 2 cut(s) 729, 2550
PscI ACATGT 2 cut(s) 1269, 1554
PshBI ATTAAT 1 cut(s) 288
PsiI TTATAA 1 cut(s) 1190
Psp124BI GAGCTC 1 cut(s) 1051
Psp1406I AACGTT 1 cut(s) 1510
Psp5II RGGWCCY 2 cut(s) 729, 2550
Psp6I CCWGG 4 cut(s) 732, 1135, 1922, 2187
PspCI CACGTG 1 cut(s) 1688
PspGI CCWGG 4 cut(s) 732, 1135, 1922, 2187
PspN4I GGNNCC 9 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746, 3060
PspPI GGNCC 9 cut(s) 102, 432, 697, 729, 971, 1597, 1638, 2388, 2550
PspPPI RGGWCCY 2 cut(s) 729, 2550
PsrI GAACNNNNNNTAC 2 cut(s) 2564, 2596
PstI CTGCAG 1 cut(s) 112
PstNI CAGNNNCTG 2 cut(s) 2354, 3308
PsuI RGATCY 6 cut(s) 559, 736, 1093, 1477, 1501, 2350
PvuII CAGCTG 4 cut(s) 593, 1013, 2586, 2924
RsaI GTAC 8 cut(s) 206, 874, 2079, 2135, 2533, 2984, 3321, 3355
RsaNI GTAC 8 cut(s) 205, 873, 2078, 2134, 2532, 2983, 3320, 3354
RseI CAYNNNNRTG 2 cut(s) 817, 2665
SacI GAGCTC 1 cut(s) 1051
SapI GCTCTTC 2 cut(s) 1894, 3282
Sau96I GGNCC 9 cut(s) 102, 432, 697, 729, 971, 1597, 1638, 2388, 2550
SchI GAGTC 5 cut(s) 128, 1676, 2231, 2249, 2285
ScrFI CCNGG 4 cut(s) 734, 1137, 1924, 2189
SduI GDGCHC 6 cut(s) 1051, 1180, 1745, 2674, 2700, 2842
SfaNI GCATC 8 cut(s) 738, 1138, 1363, 1385, 1612, 2305, 2517, 3119
SfcI CTRYAG 3 cut(s) 108, 1817, 2082
SfuI TTCGAA 2 cut(s) 416, 1277
SgrAI CRCCGGYG 1 cut(s) 358
SinI GGWCC 6 cut(s) 102, 432, 697, 729, 1597, 2550
SmiI ATTTAAAT 2 cut(s) 609, 768
SmiMI CAYNNNNRTG 2 cut(s) 817, 2665
SmlI CTYRAG 2 cut(s) 538, 3293
SmoI CTYRAG 2 cut(s) 538, 3293
SsiI CCGC 7 cut(s) 27, 41, 105, 253, 1877, 3073, 3368
SspI AATATT 3 cut(s) 2215, 2360, 3094
SspMI CTAG 4 cut(s) 465, 557, 1334, 1652
SstI GAGCTC 1 cut(s) 1051
StyD4I CCNGG 4 cut(s) 732, 1135, 1922, 2187
StyI CCWWGG 1 cut(s) 2391
SwaI ATTTAAAT 2 cut(s) 609, 768
TaaI ACNGT 8 cut(s) 476, 800, 986, 1032, 1989, 2002, 2654, 2702
TaiI ACGT 6 cut(s) 266, 1248, 1422, 1513, 1633, 1690
TaqII GACCGA 1 cut(s) 420
TatI WGTACW 3 cut(s) 204, 3319, 3353
TauI GCSGC 2 cut(s) 256, 1880
TfiI GAWTC 9 cut(s) 71, 1160, 1492, 1964, 2299, 2471, 3160, 3190, 3364
TscAI CASTG 6 cut(s) 90, 1185, 1594, 2562, 2847, 2973
TseFI GTSAC 4 cut(s) 1631, 2252, 2270, 2876
Tsp45I GTSAC 4 cut(s) 1631, 2252, 2270, 2876
TspGWI ACGGA 3 cut(s) 226, 2033, 2311
TspRI CASTG 6 cut(s) 90, 1185, 1594, 2562, 2847, 2973
Van91I CCANNNNNTGG 1 cut(s) 1512
Vha464I CTTAAG 1 cut(s) 538
VneI GTGCAC 2 cut(s) 1176, 2838
VpaK11BI GGWCC 6 cut(s) 102, 432, 697, 729, 1597, 2550
VspI ATTAAT 1 cut(s) 288
XapI RAATTY 7 cut(s) 172, 386, 763, 1192, 1668, 1734, 2604
XceI RCATGY 8 cut(s) 787, 1273, 1558, 2207, 2322, 2795, 2838, 2997
XcmI CCANNNNNNNNNTGG 2 cut(s) 82, 1607
XmiI GTMKAC 1 cut(s) 795
XmnI GAANNNNTTC 2 cut(s) 272, 1695
XspI CTAG 4 cut(s) 465, 557, 1334, 1652
Zsp2I ATGCAT 3 cut(s) 1378, 2320, 3084
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.