Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0007173

Physical Location & Seq

Genomic Coordinates Forward (+)

12953728 .. 12960166

Gene Structure 6439 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g16960.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3366 bp

ATGCAAGTCCCCAATTCTGACGAAGCTGCCCCCGAAAGCACTAAGGTACCTGAGCAATCAGAAGCTGAAACCTCCAATCCGACTGTCGAAGATGAAGACGGCGGCGCCGCGGCCGACGGTGACGACGACCCTAGGGTTGTCGACATATCCGGCAAAAGCTTGGACTTTTCGATTGGGGAGAATTCTGAGGATGTCGGGGCTTTGTATTTGTACAAAAACGTGTTTAATTTATTGCCCAAGTCGATTGGCTCTCACAAGCGGTTGAGGACGCTGAAGTTCTTTGGGAATGAGATTAATTTATTTTCGCCTTCAGCGGCAATGGAGTTTGAGAGCTTGGAATGCTTGCAAGTGAGGATGTCGTCGCCGGAGTTTTGTGGGTTGCCGTTGGATAAATTGAGTGGCTTGAAGGAGCTTGAGCTTTCCAAAGTGCCGACGAGGCCTTCGGGGTTTCAGATATTGAGCGAGATTGCTCGGCTCAAGTGCCTCACCAAGCTCTCTGTTTGTCACTTCTCCATAAGATACCTCCCTCCAGAAATTGGCTGCTTAAACACTTTGGAATATCTAGATCTTTCATTCAACAAGATGAAGAATTTGCCTGCTGAAATCAGTAATTTAAATGACTTGATATCGTTAAAAGTTGCTAATAATAAATTGGTGGAATTACCTTCGACTTTGTCCTCTTTGCAAAGGTTGGAGATCATGGACCTGTCAAATAATAGGTTGACATCACTAGGGTCTCTTGAACTTGACTTGATGCACAACCTTCAGATTTTAAATCTTCAGTACAACAAGCTTCTCACTTTCTGTCAAATACCCTCATGGATATGTTGCAATTTGGAAGGAAGTGGGAAGGACACACACAGTGATGATATTTCCATTTCCTCTGTTGAAATGGATGTATATGAAACCCCCCTTCAGAAAAATAATGAAAGCCATTTTCGTAGAGGCTTTCATCATAACTCAGCAAGTCTAATTTTCACGCATTCATCTACCAGTAGGTGCTGTGCAACTCGGAGGTCAGGTAGGTGGAGGAAGCAAGGGTATAGGTTGCAGCAGAGAGCTCGTCAAGAACGCTTAAACAACAGCAGGAAGTTGAAAGGTCTTGATCTTTCCAAGCAGTTACATGTGAAGGAAGATGGAGAATGCAAACCAGGCAACCCTGACCTTCTTGCTTCTGAATCTTACCCTGAAGGTGCATCAGTCATTATCAATCTGGACGATGATGTTGAGAAAGATTTACCATCTAGGGAAGTGCAAAGTGAAAATGTTGTGTGCCATGATATGAGTTTGAAGGAGCATTCTGTAGGAAATTCCTCATCAGTGAGTCCAGACTCTAGTGCAGTAGATGAAAGTGATGAAAAGGATTGTTGTGAGTTTGATGCATCGTCGGCCCCCAATCAACGGGTTTATGGTGAGGAAGATGAAGGTTCATCTTCAGATACATCAAAAAGTATTTGTCAACCCAAAAGGCACCCTGATGGGTGCCTTGATAATCCGAGACAGCCCAAACATCCTAGATACAGTTCTAATAGTTCAAACTTGTCTCGGAAATATAATGACATCTCAGTTTGCAGCACTGAGGACCATCTTTCAGATGGCTTTTACGATGCAGGGCGTGACAGGCCATTCATGCCACTAGAACTCTATGATGAAAAGTTCTGTCTTGACTCACGTGAAGTCATTCTCTTGGACAGGCAATGGGATAAAGAGTTGGATGTAATTTTATGTTCTGCCCAAGAATTGGTGAATCGTTTAAATACGGATGGAAATAAGGCTGATATGCTGCAGATTGCATCACTACTTGCTCTGTTTGTATCAGATCACTTTGGGGGGAGTGATAGGAGTGCTCTTGTTGAATGGTCACGAAAAGCTAATCCTCTTTCAGACTACAAGAAGCCTTTTGTTTGCACCTGCCCAACTGGAAACAAGGGCTTTATTAGTTTGTCCACTAAACCAGTTGTAAAGAATGTTGAAGATATCATTTTTTCTGATGTCTGTGAGAAATCTCTTCATTCTATCAAAGCACGACGAAATTCCATTGTAGTTCCCATTGGAACCTTGCAGTTTGGTGTGTGTCGGCATAGAGCATTGCTATTGAAGTATCTTTGTGATTGGGTGGAGCCTCGAGTACCTTGTGAGCTGATTAGGGGTTATTTGGATTTCATGCCACATGCGTGGAATATTGTATTAATCAAGAGAGGTGCCAAAGAGATTCGAATGTTAGTTGATGCATGTCGTCCACATGATATAAGAGCGGAGACGGATCCCGAATATTATTGTAGGTATATTCCTCTCAGTCGGACCAAAGTTTATCTTCCAATTCGAAACAGCCCTGCTCCTACCTCCTTACATTCTATGCCCTCTTGTGATGAAACTCTGAAAAACTCTGTTACTTCTCTCGTCCGGCGCAAATATGGATCGATCATAAATGAGGCAGCAGGAAAGATGCGTACTTCTGTGGTATATGGAACTTCAACGGATGAAATTAGGAACTTTGACTACAACTGCTTAGGGGAAATAAGGATTTTAGGTGCTTTGAAACACCCTTGCATAGTGGAAATGTATGGACATCAGATATCTTCCAAGTGGGTTCCTCCTGGAGATGGTAATAGTGAGCATCGTATATTGCAGTCTATAATTTGGATGGAGGACATAAAAGGGGGTTCCTTACAGAATTATATAGAAAAGTTATCAAAAGCTGGTGAGAAGCATCTCCCAGTGGAGTTAGCTTTGCGCATTGCTAAAAATGTTGCATGTGCACTGGTGGAGCTGCATTCAAAGCACATTATTCACCGGGACATAAAAAGTGCAAACATATTGATTGATCTGGATAGAAAGAGAGCTGATGGAACACCTGTTGTGAAGCTCTGTGATTTTGATAGGGCAATTCCCCTTCGATCTTACTTGCATACGTGCTGCATTGCCCACGTTGGAATACCTTCTGCTAATGTTTGTGCTGGAACACCTCGCTGGATGGCCCCAGAGGTTTTGCGAGCAGTGCATGAACAAAATATTTATGGATTGGAAATTGATATCTGGTCATTTGGGTGCTTGCTGTTGGAAATGTTGACTTTGCAAATTCCGTACTTAGGAGTACCTGACTTGGAGATTCATGAACTTCTGACGAAGGGAAAACGACCAAATTTAACGGATGACTTGGAGGTGTTTCGGTCGTTGAATGAGCCAGTAATGACTCAAGCGGGCGCAGAACTTGATGGAACAGAGGCTGACTTAGACACACTGAGATTTCTTGTTGACTTGTTTTACCAATGTACGGAGGAGAATCCGGAGAATCGTCCTACAGCCGACAACCTCTACGAATTGATACTGGAGCACAGCAAAACTCATACAAACTCCGAAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EDR1 LRR_8 Pkinase

Protein Analysis

1122

Amino Acids

125.87

Weight (kDa)

5.54

Isoelectric Point (pI)

48.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007173)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04210
fragaria_vesca	FvH4_4g01620 FvH4_4g01620 FvH4_4g01620 FvH4_4g01620 FvH4_4g01620
malus_domestica	MD13G1201100.v1.1 MD16G1200600.v1.1
prunus_persica	Prupe.1G022600_v2.0.a1 Prupe.1G022600_v2.0.a1 Prupe.1G022600_v2.0.a1 Prupe.1G022600_v2.0.a1
pyrus_communis	pycom13g17450 pycom16g16960
rosa_chinensis	RchiOBHm_Chr4g0388191
rosa_laevigata	RLG00000010075
rosa_multiflora	Rmu_sc0001564.1_g000006
rosa_roxburghii	Rroxscaffold_5G00334700
rosa_rugosa	Rorug03G0315900 Rorug03G0316000
rosa_samantha	Rh4AG021500 Rh4BG015600 Rh4CG021700 Rh4DG016400
rosa_wichuraiana	Rw4G001410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1919
Acc16I	TGCGCA	1 cut(s)	2735
Acc36I	ACCTGC	1 cut(s)	1919
Acc65I	GGTACC	1 cut(s)	46
AccB1I	GGYRCC	5 cut(s)	46, 104, 1470, 1482, 2201
AccB7I	CCANNNNNTGG	2 cut(s)	536, 1741
AccBSI	CCGCTC	1 cut(s)	2255
AccI	GTMKAC	1 cut(s)	141
AccII	CGCG	1 cut(s)	110
AccIII	TCCGGA	1 cut(s)	3286
AciI	CCGC	7 cut(s)	102, 108, 110, 259, 314, 2255, 3200
AclWI	GGATC	3 cut(s)	2258, 2271, 2425
AcoI	YGGCCR	1 cut(s)	111
AcsI	RAATTY	6 cut(s)	181, 589, 1309, 2032, 3078, 3142
AcuI	CTGAAG	7 cut(s)	293, 294, 749, 764, 899, 1209, 1419
AcvI	CACGTG	1 cut(s)	1673
AcyI	GRCGYC	1 cut(s)	105
AdeI	CACNNNGTG	1 cut(s)	863
AfaI	GTAC	8 cut(s)	48, 212, 785, 2130, 2452, 3086, 3096, 3274
AfiI	CCNNNNNNNGG	6 cut(s)	536, 1401, 1741, 2603, 3089, 3274
AflIII	ACRYGT	2 cut(s)	219, 1123
AjnI	CCWGG	2 cut(s)	1150, 2596
AleI	CACNNNNGTG	1 cut(s)	2173
Alw21I	GWGCWC	4 cut(s)	1063, 1849, 2761, 3336
Alw26I	GTCTC	4 cut(s)	741, 1492, 1548, 2252
Alw44I	GTGCAC	1 cut(s)	2757
AlwI	GGATC	3 cut(s)	2258, 2271, 2425
AlwNI	CAGNNNCTG	2 cut(s)	65, 3227
Ama87I	CYCGRG	1 cut(s)	2124
Aor13HI	TCCGGA	1 cut(s)	3286
AoxI	GGCC	5 cut(s)	111, 437, 1389, 1622, 2976
ApaLI	GTGCAC	1 cut(s)	2757
ApeKI	GCWGC	8 cut(s)	26, 540, 1051, 1572, 1783, 2435, 2770, 2916
ApoI	RAATTY	6 cut(s)	181, 589, 1309, 2032, 3078, 3142
ArsI	GACNNNNNNTTYG	2 cut(s)	424, 456
AseI	ATTAAT	2 cut(s)	294, 2189
Asp700I	GAANNNNTTC	2 cut(s)	1680, 2938
Asp718I	GGTACC	1 cut(s)	46
AspA2I	CCTAGG	1 cut(s)	131
AspLEI	GCGC	4 cut(s)	107, 2409, 2736, 3206
AspS9I	GGNCC	5 cut(s)	703, 1390, 1582, 2301, 2977
AsuC2I	CCSGG	1 cut(s)	2795
AsuHPI	GGTGA	6 cut(s)	131, 478, 1424, 1756, 2714, 2783
AsuII	TTCGAA	2 cut(s)	2215, 2323
AvaI	CYCGRG	1 cut(s)	2124
AvaII	GGWCC	3 cut(s)	703, 1582, 2301
AvrII	CCTAGG	1 cut(s)	131
BaeGI	GKGCMC	1 cut(s)	2761
BaeI	ACNNNNGTAYC	2 cut(s)	30, 63
BamHI	GGATCC	1 cut(s)	2263
BanI	GGYRCC	5 cut(s)	46, 104, 1470, 1482, 2201
BanII	GRGCYC	1 cut(s)	1063
BbrPI	CACGTG	1 cut(s)	1673
BbsI	GAAGAC	1 cut(s)	102
Bbv12I	GWGCWC	4 cut(s)	1063, 1849, 2761, 3336
BbvI	GCAGC	8 cut(s)	13, 527, 1063, 1584, 1770, 2447, 2757, 2903
BceAI	ACGGC	2 cut(s)	115, 367
BcgI	CGANNNNNNTGC	2 cut(s)	1043, 1077
BciT130I	CCWGG	2 cut(s)	1152, 2598
BcnI	CCSGG	1 cut(s)	2795
BcoDI	GTCTC	4 cut(s)	741, 1492, 1548, 2252
BfaI	CTAG	7 cut(s)	132, 563, 731, 1245, 1335, 1515, 1637
BfmI	CTRYAG	3 cut(s)	1302, 1784, 3300
BfoI	RGCGCY	1 cut(s)	108
BfuAI	ACCTGC	1 cut(s)	1919
BglI	GCCNNNNNGGC	1 cut(s)	436
BglII	AGATCT	1 cut(s)	565
BlnI	CCTAGG	1 cut(s)	131
Bme1390I	CCNGG	3 cut(s)	1152, 2598, 2795
Bme18I	GGWCC	3 cut(s)	703, 1582, 2301
BmeT110I	CYCGRG	1 cut(s)	2124
BmgT120I	GGNCC	5 cut(s)	703, 1390, 1582, 2301, 2977
BmrFI	CCNGG	3 cut(s)	1152, 2598, 2795
BmrI	ACTGGG	1 cut(s)	2711
BmuI	ACTGGG	1 cut(s)	2711
BpiI	GAAGAC	1 cut(s)	102
BpmI	CTGGAG	3 cut(s)	513, 2619, 3350
Bpu10I	CCTNAGC	2 cut(s)	51, 2509
Bpu14I	TTCGAA	2 cut(s)	2215, 2323
BpuEI	CTTGAG	3 cut(s)	434, 461, 3180
BpuMI	CCSGG	1 cut(s)	2795
Bsa29I	ATCGAT	1 cut(s)	2420
BsaAI	YACGTR	2 cut(s)	1673, 2913
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	1 cut(s)	741
BsaJI	CCNNGG	2 cut(s)	108, 131
BsaWI	WCCGGW	1 cut(s)	3286
BsaXI	ACNNNNNCTCC	2 cut(s)	1006, 1036
Bsc4I	CCNNNNNNNGG	6 cut(s)	536, 1401, 1741, 2603, 3089, 3274
Bse1I	ACTGG	7 cut(s)	993, 1924, 1955, 2717, 2766, 3185, 3333
Bse3DI	GCAATG	5 cut(s)	324, 1703, 2087, 2736, 2919
BseAI	TCCGGA	1 cut(s)	3286
BseBI	CCWGG	2 cut(s)	1152, 2598
BseCI	ATCGAT	1 cut(s)	2420
BseDI	CCNNGG	2 cut(s)	108, 131
BseLI	CCNNNNNNNGG	6 cut(s)	536, 1401, 1741, 2603, 3089, 3274
BseMI	GCAATG	5 cut(s)	324, 1703, 2087, 2736, 2919
BseMII	CTCAG	7 cut(s)	42, 177, 975, 1569, 1578, 2308, 3233
BseNI	ACTGG	7 cut(s)	993, 1924, 1955, 2717, 2766, 3185, 3333
BseRI	GAGGAG	1 cut(s)	3293
BseSI	GKGCMC	1 cut(s)	2761
BseX3I	CGGCCG	1 cut(s)	111
BseXI	GCAGC	8 cut(s)	13, 527, 1063, 1584, 1770, 2447, 2757, 2903
BsgI	GTGCAG	1 cut(s)	1359
Bsh1236I	CGCG	1 cut(s)	110
Bsh1285I	CGRYCG	2 cut(s)	114, 3173
BshFI	GGCC	5 cut(s)	113, 439, 1391, 1624, 2978
BshNI	GGYRCC	5 cut(s)	46, 104, 1470, 1482, 2201
BshVI	ATCGAT	1 cut(s)	2420
BsiEI	CGRYCG	2 cut(s)	114, 3173
BsiHKAI	GWGCWC	4 cut(s)	1063, 1849, 2761, 3336
BsiHKCI	CYCGRG	1 cut(s)	2124
BsiSI	CCGG	5 cut(s)	150, 365, 2404, 2794, 3287
BslFI	GGGAC	1 cut(s)	2810
BslI	CCNNNNNNNGG	6 cut(s)	536, 1401, 1741, 2603, 3089, 3274
BsmAI	GTCTC	4 cut(s)	741, 1492, 1548, 2252
BsmBI	CGTCTC	1 cut(s)	2252
BsmFI	GGGAC	1 cut(s)	2810
BsmI	GAATGC	5 cut(s)	344, 982, 1148, 1297, 2773
BsnI	GGCC	5 cut(s)	113, 439, 1391, 1624, 2978
Bso31I	GGTCTC	1 cut(s)	741
BsoBI	CYCGRG	1 cut(s)	2124
Bsp119I	TTCGAA	2 cut(s)	2215, 2323
Bsp1286I	GDGCHC	4 cut(s)	1063, 1849, 2761, 3336
Bsp13I	TCCGGA	1 cut(s)	3286
Bsp1407I	TGTACA	1 cut(s)	210
Bsp143I	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
BspACI	CCGC	7 cut(s)	102, 108, 110, 259, 314, 2255, 3200
BspANI	GGCC	5 cut(s)	113, 439, 1391, 1624, 2978
BspCNI	CTCAG	7 cut(s)	43, 178, 974, 1570, 1577, 2307, 3234
BspDI	ATCGAT	1 cut(s)	2420
BspEI	TCCGGA	1 cut(s)	3286
BspFNI	CGCG	1 cut(s)	110
BspHI	TCATGA	1 cut(s)	3112
BspMAI	CTGCAG	1 cut(s)	1788
BspMI	ACCTGC	1 cut(s)	1919
BspPI	GGATC	3 cut(s)	2258, 2271, 2425
BspT104I	TTCGAA	2 cut(s)	2215, 2323
BspT107I	GGYRCC	5 cut(s)	46, 104, 1470, 1482, 2201
BspTNI	GGTCTC	1 cut(s)	741
BsrBI	CCGCTC	1 cut(s)	2255
BsrDI	GCAATG	5 cut(s)	324, 1703, 2087, 2736, 2919
BsrGI	TGTACA	1 cut(s)	210
BsrI	ACTGG	7 cut(s)	993, 1924, 1955, 2717, 2766, 3185, 3333
BssECI	CCNNGG	2 cut(s)	108, 131
BssMI	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
BssNI	GRCGYC	1 cut(s)	105
BssT1I	CCWWGG	1 cut(s)	131
Bst2UI	CCWGG	2 cut(s)	1152, 2598
Bst4CI	ACNGT	4 cut(s)	85, 119, 863, 1523
Bst6I	CTCTTC	1 cut(s)	2013
BstACI	GRCGYC	1 cut(s)	105
BstAUI	TGTACA	1 cut(s)	210
BstBAI	YACGTR	2 cut(s)	1673, 2913
BstBI	TTCGAA	2 cut(s)	2215, 2323
BstC8I	GCNNGC	5 cut(s)	344, 597, 2994, 3053, 3202
BstDSI	CCRYGG	1 cut(s)	108
BstFNI	CGCG	1 cut(s)	110
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	4 cut(s)	107, 2409, 2736, 3206
BstKTI	GATC	9 cut(s)	568, 699, 1108, 1822, 2266, 2420, 2424, 2827, 2900
BstMAI	GTCTC	4 cut(s)	741, 1492, 1548, 2252
BstMBI	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
BstMCI	CGRYCG	2 cut(s)	114, 3173
BstMWI	GCNNNNNNNGC	8 cut(s)	339, 436, 1152, 1388, 1621, 1630, 2779, 2998
BstNI	CCWGG	2 cut(s)	1152, 2598
BstNSI	RCATGY	4 cut(s)	1127, 2174, 2235, 2757
BstSCI	CCNGG	3 cut(s)	1150, 2596, 2793
BstSFI	CTRYAG	3 cut(s)	1302, 1784, 3300
BstSLI	GKGCMC	1 cut(s)	2761
BstUI	CGCG	1 cut(s)	110
BstV1I	GCAGC	8 cut(s)	13, 527, 1063, 1584, 1770, 2447, 2757, 2903
BstV2I	GAAGAC	1 cut(s)	102
BstX2I	RGATCY	2 cut(s)	565, 2263
BstXI	CCANNNNNNTGG	1 cut(s)	2175
BstYI	RGATCY	2 cut(s)	565, 2263
BstZI	CGGCCG	1 cut(s)	111
Bsu15I	ATCGAT	1 cut(s)	2420
BsuRI	GGCC	5 cut(s)	113, 439, 1391, 1624, 2978
BsuTUI	ATCGAT	1 cut(s)	2420
BtgI	CCRYGG	1 cut(s)	108
BtsI	GCAGTG	1 cut(s)	3003
BtsIMutI	CAGTG	7 cut(s)	868, 1326, 1575, 2724, 2759, 3003, 3239
BveI	ACCTGC	1 cut(s)	1919
Cac8I	GCNNGC	5 cut(s)	344, 597, 2994, 3053, 3202
CaiI	CAGNNNCTG	2 cut(s)	65, 3227
CciI	TCATGA	1 cut(s)	3112
CfoI	GCGC	4 cut(s)	107, 2409, 2736, 3206
Cfr13I	GGNCC	5 cut(s)	703, 1390, 1582, 2301, 2977
Cfr42I	CCGCGG	1 cut(s)	111
ClaI	ATCGAT	1 cut(s)	2420
CseI	GACGC	1 cut(s)	277
Csp6I	GTAC	8 cut(s)	47, 211, 784, 2129, 2451, 3085, 3095, 3273
CviQI	GTAC	8 cut(s)	47, 211, 784, 2129, 2451, 3085, 3095, 3273
DinI	GGCGCC	1 cut(s)	106
DpnI	GATC	9 cut(s)	567, 698, 1107, 1821, 2265, 2419, 2423, 2826, 2899
DpnII	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
DraI	TTTAAA	3 cut(s)	615, 774, 1755
DraIII	CACNNNGTG	1 cut(s)	863
EaeI	YGGCCR	1 cut(s)	111
EagI	CGGCCG	1 cut(s)	111
Eam1104I	CTCTTC	1 cut(s)	2013
EarI	CTCTTC	1 cut(s)	2013
Ecl136II	GAGCTC	1 cut(s)	1061
EclXI	CGGCCG	1 cut(s)	111
Eco130I	CCWWGG	1 cut(s)	131
Eco147I	AGGCCT	1 cut(s)	439
Eco24I	GRGCYC	1 cut(s)	1063
Eco31I	GGTCTC	1 cut(s)	741
Eco32I	GATATC	4 cut(s)	627, 1978, 2577, 3034
Eco47I	GGWCC	3 cut(s)	703, 1582, 2301
Eco52I	CGGCCG	1 cut(s)	111
Eco53kI	GAGCTC	1 cut(s)	1061
Eco57I	CTGAAG	7 cut(s)	293, 294, 749, 764, 899, 1209, 1419
Eco72I	CACGTG	1 cut(s)	1673
Eco88I	CYCGRG	1 cut(s)	2124
EcoICRI	GAGCTC	1 cut(s)	1061
EcoRI	GAATTC	1 cut(s)	181
EcoRII	CCWGG	2 cut(s)	1150, 2596
EcoRV	GATATC	4 cut(s)	627, 1978, 2577, 3034
EcoT14I	CCWWGG	1 cut(s)	131
EcoT22I	ATGCAT	2 cut(s)	1384, 2233
EcoT38I	GRGCYC	1 cut(s)	1063
EgeI	GGCGCC	1 cut(s)	106
EheI	GGCGCC	1 cut(s)	106
ErhI	CCWWGG	1 cut(s)	131
Esp3I	CGTCTC	1 cut(s)	2252
FalI	AAGNNNNNCTT	2 cut(s)	2298, 2330
FaqI	GGGAC	1 cut(s)	2810
FauI	CCCGC	1 cut(s)	3193
FblI	GTMKAC	1 cut(s)	141
FriOI	GRGCYC	1 cut(s)	1063
FspBI	CTAG	7 cut(s)	132, 563, 731, 1245, 1335, 1515, 1637
FspI	TGCGCA	1 cut(s)	2735
GlaI	GCGC	4 cut(s)	106, 2408, 2735, 3205
GsuI	CTGGAG	3 cut(s)	513, 2619, 3350
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	5 cut(s)	113, 439, 1391, 1624, 2978
HapII	CCGG	5 cut(s)	150, 365, 2404, 2794, 3287
HgaI	GACGC	1 cut(s)	277
HhaI	GCGC	4 cut(s)	107, 2409, 2736, 3206
Hin1I	GRCGYC	1 cut(s)	105
Hin6I	GCGC	4 cut(s)	105, 2407, 2734, 3204
HinP1I	GCGC	4 cut(s)	105, 2407, 2734, 3204
HincII	GTYRAC	5 cut(s)	142, 723, 1460, 3069, 3256
HindII	GTYRAC	5 cut(s)	142, 723, 1460, 3069, 3256
HindIII	AAGCTT	2 cut(s)	157, 791
HpaII	CCGG	5 cut(s)	150, 365, 2404, 2794, 3287
HphI	GGTGA	6 cut(s)	131, 478, 1424, 1756, 2714, 2783
Hpy166II	GTNNAC	8 cut(s)	142, 723, 1460, 1947, 2240, 2759, 3069, 3256
Hpy8I	GTNNAC	8 cut(s)	142, 723, 1460, 1947, 2240, 2759, 3069, 3256
Hpy99I	CGWCG	6 cut(s)	119, 128, 364, 436, 1390, 2031
HpyCH4III	ACNGT	4 cut(s)	85, 119, 863, 1523
HpyCH4IV	ACGT	4 cut(s)	219, 1672, 2912, 2928
HpyF10VI	GCNNNNNNNGC	8 cut(s)	339, 436, 1152, 1388, 1621, 1630, 2779, 2998
HpySE526I	ACGT	4 cut(s)	219, 1672, 2912, 2928
Hsp92I	GRCGYC	1 cut(s)	105
HspAI	GCGC	4 cut(s)	105, 2407, 2734, 3204
KasI	GGCGCC	1 cut(s)	104
Kpn2I	TCCGGA	1 cut(s)	3286
KpnI	GGTACC	1 cut(s)	50
KspI	CCGCGG	1 cut(s)	111
Kzo9I	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
LmnI	GCTCC	6 cut(s)	409, 1294, 2119, 2341, 2767, 3331
Lsp1109I	GCAGC	8 cut(s)	13, 527, 1063, 1584, 1770, 2447, 2757, 2903
MaeI	CTAG	7 cut(s)	132, 563, 731, 1245, 1335, 1515, 1637
MaeII	ACGT	4 cut(s)	219, 1672, 2912, 2928
MaeIII	GTNAC	6 cut(s)	119, 503, 1119, 1616, 1860, 2389
MalI	GATC	9 cut(s)	567, 698, 1107, 1821, 2265, 2419, 2423, 2826, 2899
MbiI	CCGCTC	1 cut(s)	2255
MboI	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
MflI	RGATCY	2 cut(s)	565, 2263
MhlI	GDGCHC	4 cut(s)	1063, 1849, 2761, 3336
Mly113I	GGCGCC	1 cut(s)	105
MlyI	GAGTC	4 cut(s)	1325, 1333, 1661, 3187
MmeI	TCCRAC	7 cut(s)	104, 366, 672, 1692, 2279, 2911, 3039
Mph1103I	ATGCAT	2 cut(s)	1384, 2233
MroI	TCCGGA	1 cut(s)	3286
MroXI	GAANNNNTTC	2 cut(s)	1680, 2938
MslI	CAYNNNNRTG	5 cut(s)	823, 864, 1476, 2173, 3046
MspA1I	CMGCKG	2 cut(s)	110, 314
MspI	CCGG	5 cut(s)	150, 365, 2404, 2794, 3287
MspR9I	CCNGG	3 cut(s)	1152, 2598, 2795
Mva1269I	GAATGC	5 cut(s)	344, 982, 1148, 1297, 2773
MvaI	CCWGG	2 cut(s)	1152, 2598
MvnI	CGCG	1 cut(s)	110
MwoI	GCNNNNNNNGC	8 cut(s)	339, 436, 1152, 1388, 1621, 1630, 2779, 2998
NarI	GGCGCC	1 cut(s)	105
NciI	CCSGG	1 cut(s)	2795
NdeII	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
NmeAIII	GCCGAG	1 cut(s)	451
NmuCI	GTSAC	4 cut(s)	119, 503, 1616, 1860
NsbI	TGCGCA	1 cut(s)	2735
NsiI	ATGCAT	2 cut(s)	1384, 2233
NspI	RCATGY	4 cut(s)	1127, 2174, 2235, 2757
NspV	TTCGAA	2 cut(s)	2215, 2323
OliI	CACNNNNGTG	1 cut(s)	2173
PaeR7I	CTCGAG	1 cut(s)	2124
PagI	TCATGA	1 cut(s)	3112
PaqCI	CACCTGC	1 cut(s)	1919
PceI	AGGCCT	1 cut(s)	439
PciI	ACATGT	1 cut(s)	1123
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PctI	GAATGC	5 cut(s)	344, 982, 1148, 1297, 2773
PdmI	GAANNNNTTC	2 cut(s)	1680, 2938
PfeI	GAWTC	6 cut(s)	1178, 1747, 2212, 3109, 3283, 3292
PflFI	GACNNNGTC	1 cut(s)	673
PflMI	CCANNNNNTGG	2 cut(s)	536, 1741
PfoI	TCCNGGA	1 cut(s)	2596
PleI	GAGTC	4 cut(s)	1325, 1332, 1661, 3187
PluTI	GGCGCC	1 cut(s)	108
PmaCI	CACGTG	1 cut(s)	1673
PmlI	CACGTG	1 cut(s)	1673
PpsI	GAGTC	4 cut(s)	1325, 1332, 1661, 3187
Ppu21I	YACGTR	2 cut(s)	1673, 2913
PscI	ACATGT	1 cut(s)	1123
PshBI	ATTAAT	2 cut(s)	294, 2189
Psp124BI	GAGCTC	1 cut(s)	1063
Psp6I	CCWGG	2 cut(s)	1150, 2596
PspCI	CACGTG	1 cut(s)	1673
PspGI	CCWGG	2 cut(s)	1150, 2596
PspPI	GGNCC	5 cut(s)	703, 1390, 1582, 2301, 2977
PspXI	VCTCGAGB	1 cut(s)	2124
PsrI	GAACNNNNNNTAC	2 cut(s)	2483, 2515
PstI	CTGCAG	1 cut(s)	1788
PstNI	CAGNNNCTG	2 cut(s)	65, 3227
PsuI	RGATCY	2 cut(s)	565, 2263
PsyI	GACNNNGTC	1 cut(s)	673
RsaI	GTAC	8 cut(s)	48, 212, 785, 2130, 2452, 3086, 3096, 3274
RsaNI	GTAC	8 cut(s)	47, 211, 784, 2129, 2451, 3085, 3095, 3273
RseI	CAYNNNNRTG	5 cut(s)	823, 864, 1476, 2173, 3046
SacI	GAGCTC	1 cut(s)	1063
SacII	CCGCGG	1 cut(s)	111
SalI	GTCGAC	1 cut(s)	140
Sau3AI	GATC	9 cut(s)	565, 696, 1105, 1819, 2263, 2417, 2421, 2824, 2897
Sau96I	GGNCC	5 cut(s)	703, 1390, 1582, 2301, 2977
SchI	GAGTC	4 cut(s)	1325, 1333, 1661, 3187
ScrFI	CCNGG	3 cut(s)	1152, 2598, 2795
SduI	GDGCHC	4 cut(s)	1063, 1849, 2761, 3336
SfcI	CTRYAG	3 cut(s)	1302, 1784, 3300
SfoI	GGCGCC	1 cut(s)	106
Sfr274I	CTCGAG	1 cut(s)	2124
Sfr303I	CCGCGG	1 cut(s)	111
SfuI	TTCGAA	2 cut(s)	2215, 2323
SgrBI	CCGCGG	1 cut(s)	111
SinI	GGWCC	3 cut(s)	703, 1582, 2301
SlaI	CTCGAG	1 cut(s)	2124
SmiI	ATTTAAAT	1 cut(s)	615
SmiMI	CAYNNNNRTG	5 cut(s)	823, 864, 1476, 2173, 3046
SmlI	CTYRAG	4 cut(s)	413, 476, 2124, 3195
SmoI	CTYRAG	4 cut(s)	413, 476, 2124, 3195
SseBI	AGGCCT	1 cut(s)	439
SsiI	CCGC	7 cut(s)	102, 108, 110, 259, 314, 2255, 3200
SspDI	GGCGCC	1 cut(s)	104
SspI	AATATT	3 cut(s)	2182, 2273, 3013
SspMI	CTAG	7 cut(s)	132, 563, 731, 1245, 1335, 1515, 1637
SstI	GAGCTC	1 cut(s)	1063
StuI	AGGCCT	1 cut(s)	439
StyD4I	CCNGG	3 cut(s)	1150, 2596, 2793
StyI	CCWWGG	1 cut(s)	131
SwaI	ATTTAAAT	1 cut(s)	615
TaaI	ACNGT	4 cut(s)	85, 119, 863, 1523
TaiI	ACGT	4 cut(s)	222, 1675, 2915, 2931
TaqII	GACCGA	1 cut(s)	3159
TatI	WGTACW	2 cut(s)	210, 783
TauI	GCSGC	4 cut(s)	105, 110, 113, 317
TfiI	GAWTC	6 cut(s)	1178, 1747, 2212, 3109, 3283, 3292
TscAI	CASTG	7 cut(s)	868, 1326, 1582, 2724, 2766, 3003, 3246
TseFI	GTSAC	4 cut(s)	119, 503, 1616, 1860
TseI	GCWGC	8 cut(s)	26, 540, 1051, 1572, 1783, 2435, 2770, 2916
Tsp45I	GTSAC	4 cut(s)	119, 503, 1616, 1860
TspGWI	ACGGA	6 cut(s)	1775, 2276, 2492, 3072, 3164, 3290
TspRI	CASTG	7 cut(s)	868, 1326, 1582, 2724, 2766, 3003, 3246
Tth111I	GACNNNGTC	1 cut(s)	673
Van91I	CCANNNNNTGG	2 cut(s)	536, 1741
VneI	GTGCAC	1 cut(s)	2757
VpaK11BI	GGWCC	3 cut(s)	703, 1582, 2301
VspI	ATTAAT	2 cut(s)	294, 2189
XapI	RAATTY	6 cut(s)	181, 589, 1309, 2032, 3078, 3142
XbaI	TCTAGA	1 cut(s)	562
XceI	RCATGY	4 cut(s)	1127, 2174, 2235, 2757
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1592
XhoI	CTCGAG	1 cut(s)	2124
XmaJI	CCTAGG	1 cut(s)	131
XmiI	GTMKAC	1 cut(s)	141
XmnI	GAANNNNTTC	2 cut(s)	1680, 2938
XspI	CTAG	7 cut(s)	132, 563, 731, 1245, 1335, 1515, 1637
Zsp2I	ATGCAT	2 cut(s)	1384, 2233

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.