Rh4CG021700

Ethylene-responsive protein kinase Le-CTR1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
4298002 .. 4306407
8406 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG021700.1

Sequence Viewer

Length: 2769 bp
ATGCAAGTCCCCAATTCTGAAGAAACCGCCCCGGTAAACCCCCAAACCCCTAAAGACCCCGAAACCTCCGATTCCAGTTCGGCAGTTGATGATGACGACAGTTCCGCTGCCGACGACGAGTCGTCCGTTCTCGATGTCTCCGGCAAAAGCTTGGATTTTTCAATTGGGGAGAATTCCGGCGACGGCGTCGGGGCTTTGTATTTGTACAAAAATGTGTATAATTTATTGCCCAAGTCCGTCGGGAGGCTGAAGCGGCTGAGGACGTTGAAGTTTTTCGGGAATGAGATTAATTTGTTCTCTTCGTCGGAGTTTGGGAACTTGGTGGGATTGGAATGCTTGCAGCTCCGGCTTTCGTCGCCGGCGTTTGATGGCTTGCCATTGCATAAATTTAAAGCCTTGAAGGAGCTGGAGCTTTCGAAAGTGCCTTCTCGGTCCTCGGCTATACCGATACTGAGTGAGATTGCTAGGCTCAACTGTCTCACCAAGCTCTCTGTTTGTTACTTTTCTATAAGATACCTTCCTCCTGAAATTGGCTGCTTAAGCAAGTTGGAATACCTAGATCTTTCATTCAATAAGATGAAGAGTTTGCCAGCTGAAATTAGTAATTTAAATGCCTTGGTATCGTTAAAAGTTGCCAATAATAAATTATCAGAACTACCTTTGGCTTTGTCCTCGTTGAAAATGTTGGAGAACTTGGACCTGTCGCACAACAGGTTGACATCATTGGGGTCCCTTGATCTTAGCTTGATGCGAAACCTCCAGAATTTAAATCTTCAGCACAACATGCTTCCCATCTACTGTCAAATACCTTCATGGATATGTTGCAATTTGGAAGGTAATGGAAAAGATATGTCCAACGATGATTTTAGCAGTACCTCAGTTGAAATGGATGTATATGAAACCACCATTCAGAAGAATGATGAAAATCGTTTTCACACAGGCTTTCATCATAGCTCATCGAGTATAGTTGGGCCTTCATCTAACAGTAGGTGTTTCACAACTCGGAGATCAGCTGGCCGGTGGAAGCGACAGTTCTTGCAGAGGAGAGCTCGTCAAGAACGCTTAAATAACAGCAGGAAGTCGAAAGGTCTGGATCTTCCTAAGCTGCACATGAAGGAGGATGAAGACTGCAAACCAGGCAATATAGATGCTACTTTTGAATCATATCGTGAAAGTGCACTGGACGTTATAAATTTGGATGATGATAATGATAAAAGTTTACTTTCTGGAGAAGATGAAGGTGTAAACGTCTCCCATGCTGCACATCATGACATGTGTTCGAAGGAGGAGCTTTCTGTAAGAAGTTGCTCATCTCTCAGGGTTAACTCTACTCTAGTAGATAATGGTGATAAAAAGGATTGTTACGAGAGTGATGCATCGTCAACTTGCAATCAAGAGGTTACTGGTGAGCATGATGACGTGCCATATTCAGGAAAATCCAAATGCAGTTCAAAGTCCAAGAGGCCACGAGATGGGGATCTTGATAATAGGAATCTTCAGGATCCCAAACGTTGGAAGTGTGGAGATTGTAGTTCAAGCCTATCTTGCAGAAACATGTCTTGCAAATATAGTAATATGTCATTTTGCAGTGCTGAGGACCATCTTCCAGATGGCTTTTATGATGCAGGACGTGACAGGCCCTTCATGCCACTAGAGAGTTATGAGCAAATTTTCCATCTCGACTCACGTGAAGTTATTCTTGTGGACAGGCTAAGGGATAAAGAGTTGGATGGAATTTTGTGCTCTGCCCGAGATATGGTGTCTCAATTGAAGCAGTTAAATGGTTTAAATACAGATAGAGATCGGGATGATGAGCTACAGATTGCATTATATCTTGCTCTATTTGTATCAGATCATTTTGGAGGGACTGATAGGGCGGCTCTTGTTGAAAGGAGACGAAGAGCTGGTGGTGGTTCAATATCCAGGAAGCCTTTTGTATGCACCTGCTCAATTAGGAACTCTGAATCTATTAGTTTGAACCCCAAACAGTCTCCGGAGACTGTTGAAGATATTGCCTTTTCTGATATCTGTGAGAAATCTCTCCGTTCTATCAAAGCCAGACGAAAATCCGTTGTAGTACCTATAGGAACATTGCAGTTTGGTGTTTGTAGGCATAGAGCATTACTACTGAAGTACCTATGTGATCGGATGGAACCTCCAGTTCCTTGTGAGCTTGTCAGAGGATACCTGGATTTCATGCCACATGCTTGGAATATTATATCAGTCAAGAAAAATGACTCAGCCAAGAGAGGTGACTCAATTAAGGGAGGTGACTTGGTTGAGAGAGATGACTCACGGATTCGCATGGTTGTTGATGCATGTCGTCCGCATGATGTAAGAGAGGAGACAGATCCTGAATATTATTGCAGGTATATTCCTCTCAGTCGGGCCAAGGTTTCTTTCTCTGGAAGCAGCCCTGCTGATGTTTGTTTGTTTCCTTCATTGTCCTCTTCGGATGAAACTCAAACTGAATCTGGTAGTTCTCTTATTCGGTGTAAATATGGGTCGGCTGATGCAGCAGCAAAGATGCGTACTCTGGAGGTATATGGGACCTCAATGGATGATATTAGGAACTTTGAATACAGCTGCTTGGGTGAAGTTAGAATTTTAGGTGCTTTGCAACACCCCTGCATAGTAGAGATGTATGGACACAGTATATCATCCAAGTGGGCTCCTTCTATGGATGATAATTCTGGGCACCGTATATTGCAATCTGTAATTTTCATGGAGTATATAAACGGGGGTTCCTTAAAGGTGAAAATTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

922

Amino Acids

102.95

Weight (kDa)

5.84

Isoelectric Point (pI)

51.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 119 - 259 3.9e-13 Leucine-rich repeat region
LRR_8 PF13855 160 - 216 4.5e-06 Leucine rich repeat
EDR1_CTR1_ARMC3_pept PF14381 675 - 742 3.4e-11 EDR1/CTR1/ARMC3, peptidase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1190
AarI CACCTGC 1 cut(s) 1952
Acc36I ACCTGC 2 cut(s) 1952, 2358
AccB1I GGYRCC 1 cut(s) 2697
AccB7I CCANNNNNTGG 2 cut(s) 1472, 1512
AccIII TCCGGA 1 cut(s) 1993
AciI CCGC 5 cut(s) 27, 105, 253, 1877, 2327
AclI AACGTT 1 cut(s) 1510
AclWI GGATC 5 cut(s) 1101, 1485, 1496, 1509, 2345
AcoI YGGCCR 1 cut(s) 1015
AcsI RAATTY 7 cut(s) 172, 386, 763, 1192, 1668, 1734, 2604
AcuI CTGAAG 5 cut(s) 39, 269, 758, 1481, 2150
AcvI CACGTG 1 cut(s) 1688
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 5 cut(s) 206, 874, 2079, 2135, 2533
AfiI CCNNNNNNNGG 6 cut(s) 243, 530, 1430, 1472, 1512, 1756
AflII CTTAAG 1 cut(s) 538
AflIII ACRYGT 2 cut(s) 1272, 1554
AhdI GACNNNNNGTC 2 cut(s) 118, 121
AjiI CACGTC 2 cut(s) 1420, 1631
AjnI CCWGG 3 cut(s) 1135, 1922, 2187
AjuI GAANNNNNNNTTGG 2 cut(s) 2384, 2416
Alw21I GWGCWC 3 cut(s) 1051, 1180, 1745
Alw26I GTCTC 8 cut(s) 142, 482, 1255, 1767, 1888, 1991, 1995, 2339
Alw44I GTGCAC 1 cut(s) 1176
AlwI GGATC 5 cut(s) 1101, 1485, 1496, 1509, 2345
AlwNI CAGNNNCTG 1 cut(s) 2354
Ama87I CYCGRG 1 cut(s) 1749
Aor13HI TCCGGA 1 cut(s) 1993
AoxI GGCC 5 cut(s) 971, 1015, 1463, 1637, 2388
ApaLI GTGCAC 1 cut(s) 1176
ApeKI GCWGC 9 cut(s) 107, 340, 534, 1105, 1259, 2412, 2516, 2519, 2586
ApoI RAATTY 7 cut(s) 172, 386, 763, 1192, 1668, 1734, 2604
AseI ATTAAT 1 cut(s) 288
Asp700I GAANNNNTTC 2 cut(s) 272, 1695
AspS9I GGNCC 8 cut(s) 432, 697, 729, 971, 1597, 1638, 2388, 2550
AsuC2I CCSGG 1 cut(s) 32
AsuHPI GGTGA 7 cut(s) 472, 1358, 1418, 2264, 2282, 2606, 2767
AsuII TTCGAA 2 cut(s) 416, 1280
AvaI CYCGRG 1 cut(s) 1749
AvaII GGWCC 5 cut(s) 432, 697, 729, 1597, 2550
BaeGI GKGCMC 2 cut(s) 1180, 2700
BaeI ACNNNNGTAYC 2 cut(s) 2117, 2150
BamHI GGATCC 1 cut(s) 1501
BanI GGYRCC 1 cut(s) 2697
BanII GRGCYC 2 cut(s) 1051, 2674
BauI CACGAG 1 cut(s) 1467
BbrPI CACGTG 1 cut(s) 1688
BbsI GAAGAC 1 cut(s) 1131
Bbv12I GWGCWC 3 cut(s) 1051, 1180, 1745
BbvCI CCTCAGC 2 cut(s) 257, 1593
BbvI GCAGC 9 cut(s) 94, 352, 521, 1092, 1246, 2424, 2528, 2531, 2573
BccI CCATC 8 cut(s) 362, 800, 1466, 1604, 1608, 1683, 1724, 2143
BceAI ACGGC 1 cut(s) 199
BcgI CGANNNNNNTGC 2 cut(s) 1355, 1389
BciT130I CCWGG 3 cut(s) 1137, 1924, 2189
BciVI GTATCC 1 cut(s) 2177
BcnI CCSGG 1 cut(s) 32
BcoDI GTCTC 8 cut(s) 142, 482, 1255, 1767, 1888, 1991, 1995, 2339
BfaI CTAG 4 cut(s) 465, 557, 1334, 1652
BfmI CTRYAG 2 cut(s) 1817, 2082
BfrI CTTAAG 1 cut(s) 538
BfuAI ACCTGC 2 cut(s) 1952, 2358
BfuI GTATCC 1 cut(s) 2177
BglII AGATCT 1 cut(s) 559
Bme1390I CCNGG 4 cut(s) 32, 1137, 1924, 2189
Bme18I GGWCC 5 cut(s) 432, 697, 729, 1597, 2550
BmeRI GACNNNNNGTC 2 cut(s) 118, 121
BmeT110I CYCGRG 1 cut(s) 1749
BmgBI CACGTC 2 cut(s) 1420, 1631
BmgT120I GGNCC 8 cut(s) 432, 697, 729, 971, 1597, 1638, 2388, 2550
BmiI GGNNCC 8 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746
BmrFI CCNGG 4 cut(s) 32, 1137, 1924, 2189
BmsI GCATC 8 cut(s) 738, 1138, 1363, 1385, 1612, 2305, 2503, 2517
BpiI GAAGAC 1 cut(s) 1131
BplI GAGNNNNNCTC 2 cut(s) 1033, 1065
BpmI CTGGAG 5 cut(s) 428, 743, 1248, 2142, 2558
Bpu10I CCTNAGC 4 cut(s) 257, 1101, 1593, 1712
Bpu14I TTCGAA 2 cut(s) 416, 1280
BpuMI CCSGG 1 cut(s) 32
BsaAI YACGTR 1 cut(s) 1688
BsaBI GATNNNNATC 3 cut(s) 924, 1476, 1800
BsaHI GRCGYC 1 cut(s) 186
BsaJI CCNNGG 4 cut(s) 30, 435, 615, 2391
BsaWI WCCGGW 1 cut(s) 1993
BsaXI ACNNNNNCTCC 2 cut(s) 1036, 1066
Bsc4I CCNNNNNNNGG 6 cut(s) 243, 530, 1430, 1472, 1512, 1756
Bse118I RCCGGY 2 cut(s) 358, 1017
Bse1I ACTGG 4 cut(s) 75, 1185, 1408, 2159
Bse3DI GCAATG 2 cut(s) 377, 2090
Bse8I GATNNNNATC 3 cut(s) 924, 1476, 1800
BseAI TCCGGA 1 cut(s) 1993
BseBI CCWGG 3 cut(s) 1137, 1924, 2189
BseDI CCNNGG 4 cut(s) 30, 435, 615, 2391
BseJI GATNNNNATC 3 cut(s) 924, 1476, 1800
BseLI CCNNNNNNNGG 6 cut(s) 243, 530, 1430, 1472, 1512, 1756
BseMI GCAATG 2 cut(s) 377, 2090
BseMII CTCAG 7 cut(s) 248, 443, 891, 1330, 1584, 2253, 2395
BseNI ACTGG 4 cut(s) 75, 1185, 1408, 2159
BseRI GAGGAG 3 cut(s) 1057, 1301, 2357
BseSI GKGCMC 2 cut(s) 1180, 2700
BseXI GCAGC 9 cut(s) 94, 352, 521, 1092, 1246, 2424, 2528, 2531, 2573
BsgI GTGCAG 2 cut(s) 1091, 1245
BshFI GGCC 5 cut(s) 973, 1017, 1465, 1639, 2390
BshNI GGYRCC 1 cut(s) 2697
BsiHKAI GWGCWC 3 cut(s) 1051, 1180, 1745
BsiHKCI CYCGRG 1 cut(s) 1749
BsiSI CCGG 7 cut(s) 32, 141, 177, 346, 359, 1018, 1994
BslFI GGGAC 3 cut(s) 715, 1879, 2563
BslI CCNNNNNNNGG 6 cut(s) 243, 530, 1430, 1472, 1512, 1756
BsmAI GTCTC 8 cut(s) 142, 482, 1255, 1767, 1888, 1991, 1995, 2339
BsmBI CGTCTC 2 cut(s) 1255, 1888
BsmFI GGGAC 3 cut(s) 715, 1879, 2563
BsmI GAATGC 1 cut(s) 338
BsnI GGCC 5 cut(s) 973, 1017, 1465, 1639, 2390
BsoBI CYCGRG 1 cut(s) 1749
Bsp119I TTCGAA 2 cut(s) 416, 1280
Bsp1286I GDGCHC 5 cut(s) 1051, 1180, 1745, 2674, 2700
Bsp13I TCCGGA 1 cut(s) 1993
Bsp1407I TGTACA 1 cut(s) 204
BspACI CCGC 5 cut(s) 27, 105, 253, 1877, 2327
BspANI GGCC 5 cut(s) 973, 1017, 1465, 1639, 2390
BspCNI CTCAG 7 cut(s) 249, 444, 890, 1329, 1585, 2252, 2394
BspEI TCCGGA 1 cut(s) 1993
BspHI TCATGA 1 cut(s) 1267
BspLI GGNNCC 8 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746
BspMI ACCTGC 2 cut(s) 1952, 2358
BspPI GGATC 5 cut(s) 1101, 1485, 1496, 1509, 2345
BspQI GCTCTTC 1 cut(s) 1894
BspT104I TTCGAA 2 cut(s) 416, 1280
BspT107I GGYRCC 1 cut(s) 2697
BspTI CTTAAG 1 cut(s) 538
BsrDI GCAATG 2 cut(s) 377, 2090
BsrFI RCCGGY 2 cut(s) 358, 1017
BsrGI TGTACA 1 cut(s) 204
BsrI ACTGG 4 cut(s) 75, 1185, 1408, 2159
BssAI RCCGGY 2 cut(s) 358, 1017
BssECI CCNNGG 4 cut(s) 30, 435, 615, 2391
BssNI GRCGYC 1 cut(s) 186
BssSI CACGAG 1 cut(s) 1467
BssT1I CCWWGG 2 cut(s) 615, 2391
Bst2BI CACGAG 1 cut(s) 1467
Bst2UI CCWGG 3 cut(s) 1137, 1924, 2189
Bst4CI ACNGT 9 cut(s) 101, 476, 800, 986, 1032, 1989, 2002, 2654, 2702
Bst6I CTCTTC 4 cut(s) 304, 575, 1894, 2455
BstACI GRCGYC 1 cut(s) 186
BstAFI CTTAAG 1 cut(s) 538
BstAPI GCANNNNNTGC 1 cut(s) 784
BstAUI TGTACA 1 cut(s) 204
BstBAI YACGTR 1 cut(s) 1688
BstBI TTCGAA 2 cut(s) 416, 1280
BstC8I GCNNGC 5 cut(s) 338, 360, 374, 591, 1015
BstMAI GTCTC 8 cut(s) 142, 482, 1255, 1767, 1888, 1991, 1995, 2339
BstMWI GCNNNNNNNGC 9 cut(s) 253, 346, 355, 540, 784, 1137, 1545, 1645, 2516
BstNI CCWGG 3 cut(s) 1137, 1924, 2189
BstNSI RCATGY 5 cut(s) 787, 1276, 1558, 2207, 2322
BstSCI CCNGG 4 cut(s) 30, 1135, 1922, 2187
BstSFI CTRYAG 2 cut(s) 1817, 2082
BstSLI GKGCMC 2 cut(s) 1180, 2700
BstV1I GCAGC 9 cut(s) 94, 352, 521, 1092, 1246, 2424, 2528, 2531, 2573
BstV2I GAAGAC 1 cut(s) 1131
BstX2I RGATCY 5 cut(s) 559, 1093, 1477, 1501, 2350
BstXI CCANNNNNNTGG 1 cut(s) 2208
BstYI RGATCY 5 cut(s) 559, 1093, 1477, 1501, 2350
BsuI GTATCC 1 cut(s) 2177
BsuRI GGCC 5 cut(s) 973, 1017, 1465, 1639, 2390
BtrI CACGTC 2 cut(s) 1420, 1631
BtsI GCAGTG 1 cut(s) 1594
BtsIMutI CAGTG 2 cut(s) 1178, 1594
BveI ACCTGC 2 cut(s) 1952, 2358
Cac8I GCNNGC 5 cut(s) 338, 360, 374, 591, 1015
CaiI CAGNNNCTG 1 cut(s) 2354
CciI TCATGA 1 cut(s) 1267
Cfr10I RCCGGY 2 cut(s) 358, 1017
Cfr13I GGNCC 8 cut(s) 432, 697, 729, 971, 1597, 1638, 2388, 2550
CseI GACGC 1 cut(s) 175
Csp6I GTAC 5 cut(s) 205, 873, 2078, 2134, 2532
CviQI GTAC 5 cut(s) 205, 873, 2078, 2134, 2532
DraI TTTAAA 4 cut(s) 391, 609, 768, 1788
DriI GACNNNNNGTC 2 cut(s) 118, 121
EaeI YGGCCR 1 cut(s) 1015
Eam1104I CTCTTC 4 cut(s) 304, 575, 1894, 2455
Eam1105I GACNNNNNGTC 2 cut(s) 118, 121
EarI CTCTTC 4 cut(s) 304, 575, 1894, 2455
Ecl136II GAGCTC 1 cut(s) 1049
Eco130I CCWWGG 2 cut(s) 615, 2391
Eco24I GRGCYC 2 cut(s) 1051, 2674
Eco32I GATATC 1 cut(s) 2026
Eco47I GGWCC 5 cut(s) 432, 697, 729, 1597, 2550
Eco53kI GAGCTC 1 cut(s) 1049
Eco57I CTGAAG 5 cut(s) 39, 269, 758, 1481, 2150
Eco72I CACGTG 1 cut(s) 1688
Eco88I CYCGRG 1 cut(s) 1749
EcoICRI GAGCTC 1 cut(s) 1049
EcoO109I RGGNCCY 3 cut(s) 729, 1638, 2550
EcoRI GAATTC 1 cut(s) 172
EcoRII CCWGG 3 cut(s) 1135, 1922, 2187
EcoRV GATATC 1 cut(s) 2026
EcoT14I CCWWGG 2 cut(s) 615, 2391
EcoT22I ATGCAT 2 cut(s) 1378, 2320
EcoT38I GRGCYC 2 cut(s) 1051, 2674
ErhI CCWWGG 2 cut(s) 615, 2391
Esp3I CGTCTC 2 cut(s) 1255, 1888
FalI AAGNNNNNCTT 4 cut(s) 1528, 1560, 1683, 1715
FaqI GGGAC 3 cut(s) 715, 1879, 2563
FriOI GRGCYC 2 cut(s) 1051, 2674
FspBI CTAG 4 cut(s) 465, 557, 1334, 1652
GsuI CTGGAG 5 cut(s) 428, 743, 1248, 2142, 2558
HaeIII GGCC 5 cut(s) 973, 1017, 1465, 1639, 2390
HapII CCGG 7 cut(s) 32, 141, 177, 346, 359, 1018, 1994
HgaI GACGC 1 cut(s) 175
Hin1I GRCGYC 1 cut(s) 186
HincII GTYRAC 3 cut(s) 717, 1324, 1383
HindII GTYRAC 3 cut(s) 717, 1324, 1383
HindIII AAGCTT 1 cut(s) 148
HpaI GTTAAC 1 cut(s) 1324
HpaII CCGG 7 cut(s) 32, 141, 177, 346, 359, 1018, 1994
HphI GGTGA 7 cut(s) 472, 1358, 1418, 2264, 2282, 2606, 2767
Hpy166II GTNNAC 8 cut(s) 37, 717, 1178, 1220, 1246, 1324, 1383, 1705
Hpy8I GTNNAC 8 cut(s) 37, 717, 1178, 1220, 1246, 1324, 1383, 1705
Hpy99I CGWCG 7 cut(s) 116, 119, 185, 191, 242, 307, 358
HpyCH4III ACNGT 9 cut(s) 101, 476, 800, 986, 1032, 1989, 2002, 2654, 2702
HpyCH4IV ACGT 7 cut(s) 263, 1185, 1248, 1419, 1510, 1630, 1687
HpyF10VI GCNNNNNNNGC 9 cut(s) 253, 346, 355, 540, 784, 1137, 1545, 1645, 2516
HpySE526I ACGT 7 cut(s) 263, 1185, 1248, 1419, 1510, 1630, 1687
Hsp92I GRCGYC 1 cut(s) 186
KflI GGGWCCC 1 cut(s) 729
Kpn2I TCCGGA 1 cut(s) 1993
KroI GCCGGC 1 cut(s) 358
KroNI GCCGGC 1 cut(s) 360
KspAI GTTAAC 1 cut(s) 1324
LguI GCTCTTC 1 cut(s) 1894
LmnI GCTCC 5 cut(s) 348, 403, 409, 1288, 2677
Lsp1109I GCAGC 9 cut(s) 94, 352, 521, 1092, 1246, 2424, 2528, 2531, 2573
LweI GCATC 8 cut(s) 738, 1138, 1363, 1385, 1612, 2305, 2503, 2517
MaeI CTAG 4 cut(s) 465, 557, 1334, 1652
MaeII ACGT 7 cut(s) 263, 1185, 1248, 1419, 1510, 1630, 1687
MaeIII GTNAC 6 cut(s) 497, 1361, 1399, 1631, 2252, 2270
MfeI CAATTG 2 cut(s) 162, 1766
MflI RGATCY 5 cut(s) 559, 1093, 1477, 1501, 2350
MhlI GDGCHC 5 cut(s) 1051, 1180, 1745, 2674, 2700
MlyI GAGTC 5 cut(s) 128, 1676, 2231, 2249, 2285
MmeI TCCRAC 6 cut(s) 285, 528, 666, 879, 1493, 1707
Mph1103I ATGCAT 2 cut(s) 1378, 2320
MreI CGCCGGCG 1 cut(s) 358
MroI TCCGGA 1 cut(s) 1993
MroNI GCCGGC 1 cut(s) 358
MroXI GAANNNNTTC 2 cut(s) 272, 1695
MslI CAYNNNNRTG 2 cut(s) 817, 2665
MspA1I CMGCKG 4 cut(s) 107, 593, 1013, 2586
MspCI CTTAAG 1 cut(s) 538
MspI CCGG 7 cut(s) 32, 141, 177, 346, 359, 1018, 1994
MspR9I CCNGG 4 cut(s) 32, 1137, 1924, 2189
MunI CAATTG 2 cut(s) 162, 1766
Mva1269I GAATGC 1 cut(s) 338
MvaI CCWGG 3 cut(s) 1137, 1924, 2189
MwoI GCNNNNNNNGC 9 cut(s) 253, 346, 355, 540, 784, 1137, 1545, 1645, 2516
NaeI GCCGGC 1 cut(s) 360
NciI CCSGG 1 cut(s) 32
NgoMIV GCCGGC 1 cut(s) 358
NlaIV GGNNCC 8 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746
NmeAIII GCCGAG 1 cut(s) 416
NmuCI GTSAC 3 cut(s) 1631, 2252, 2270
NsiI ATGCAT 2 cut(s) 1378, 2320
NspI RCATGY 5 cut(s) 787, 1276, 1558, 2207, 2322
NspV TTCGAA 2 cut(s) 416, 1280
PagI TCATGA 1 cut(s) 1267
PaqCI CACCTGC 1 cut(s) 1952
PciI ACATGT 2 cut(s) 1272, 1554
PciSI GCTCTTC 1 cut(s) 1894
PcsI WCGNNNNNNNCGW 3 cut(s) 123, 359, 443
PctI GAATGC 1 cut(s) 338
PdiI GCCGGC 1 cut(s) 360
PdmI GAANNNNTTC 2 cut(s) 272, 1695
PfeI GAWTC 6 cut(s) 71, 1160, 1492, 1964, 2299, 2471
PflFI GACNNNGTC 1 cut(s) 185
PflMI CCANNNNNTGG 2 cut(s) 1472, 1512
PfoI TCCNGGA 1 cut(s) 1922
PleI GAGTC 5 cut(s) 127, 1676, 2231, 2249, 2285
PmaCI CACGTG 1 cut(s) 1688
PmlI CACGTG 1 cut(s) 1688
PpsI GAGTC 5 cut(s) 127, 1676, 2231, 2249, 2285
Ppu21I YACGTR 1 cut(s) 1688
PpuMI RGGWCCY 2 cut(s) 729, 2550
PscI ACATGT 2 cut(s) 1272, 1554
PshBI ATTAAT 1 cut(s) 288
PsiI TTATAA 1 cut(s) 1190
Psp124BI GAGCTC 1 cut(s) 1051
Psp1406I AACGTT 1 cut(s) 1510
Psp5II RGGWCCY 2 cut(s) 729, 2550
Psp6I CCWGG 3 cut(s) 1135, 1922, 2187
PspCI CACGTG 1 cut(s) 1688
PspGI CCWGG 3 cut(s) 1135, 1922, 2187
PspN4I GGNNCC 8 cut(s) 730, 731, 1503, 2154, 2551, 2673, 2699, 2746
PspPI GGNCC 8 cut(s) 432, 697, 729, 971, 1597, 1638, 2388, 2550
PspPPI RGGWCCY 2 cut(s) 729, 2550
PsrI GAACNNNNNNTAC 2 cut(s) 2564, 2596
PstNI CAGNNNCTG 1 cut(s) 2354
PsuI RGATCY 5 cut(s) 559, 1093, 1477, 1501, 2350
PsyI GACNNNGTC 1 cut(s) 185
PvuII CAGCTG 3 cut(s) 593, 1013, 2586
RsaI GTAC 5 cut(s) 206, 874, 2079, 2135, 2533
RsaNI GTAC 5 cut(s) 205, 873, 2078, 2134, 2532
RseI CAYNNNNRTG 2 cut(s) 817, 2665
SacI GAGCTC 1 cut(s) 1051
SapI GCTCTTC 1 cut(s) 1894
Sau96I GGNCC 8 cut(s) 432, 697, 729, 971, 1597, 1638, 2388, 2550
SchI GAGTC 5 cut(s) 128, 1676, 2231, 2249, 2285
ScrFI CCNGG 4 cut(s) 32, 1137, 1924, 2189
SduI GDGCHC 5 cut(s) 1051, 1180, 1745, 2674, 2700
SfaNI GCATC 8 cut(s) 738, 1138, 1363, 1385, 1612, 2305, 2503, 2517
SfcI CTRYAG 2 cut(s) 1817, 2082
SfuI TTCGAA 2 cut(s) 416, 1280
SgrAI CRCCGGYG 1 cut(s) 358
SinI GGWCC 5 cut(s) 432, 697, 729, 1597, 2550
SmiI ATTTAAAT 2 cut(s) 609, 768
SmiMI CAYNNNNRTG 2 cut(s) 817, 2665
SmlI CTYRAG 1 cut(s) 538
SmoI CTYRAG 1 cut(s) 538
SsiI CCGC 5 cut(s) 27, 105, 253, 1877, 2327
SspI AATATT 2 cut(s) 2215, 2360
SspMI CTAG 4 cut(s) 465, 557, 1334, 1652
SstI GAGCTC 1 cut(s) 1051
StyD4I CCNGG 4 cut(s) 30, 1135, 1922, 2187
StyI CCWWGG 2 cut(s) 615, 2391
SwaI ATTTAAAT 2 cut(s) 609, 768
TaaI ACNGT 9 cut(s) 101, 476, 800, 986, 1032, 1989, 2002, 2654, 2702
TaiI ACGT 7 cut(s) 266, 1188, 1251, 1422, 1513, 1633, 1690
TaqI TCGA 6 cut(s) 132, 416, 959, 1082, 1280, 1680
TaqII GACCGA 1 cut(s) 420
TatI WGTACW 1 cut(s) 204
TauI GCSGC 2 cut(s) 256, 1880
TfiI GAWTC 6 cut(s) 71, 1160, 1492, 1964, 2299, 2471
TscAI CASTG 2 cut(s) 1185, 1594
TseFI GTSAC 3 cut(s) 1631, 2252, 2270
TseI GCWGC 9 cut(s) 107, 340, 534, 1105, 1259, 2412, 2516, 2519, 2586
Tsp45I GTSAC 3 cut(s) 1631, 2252, 2270
TspGWI ACGGA 5 cut(s) 115, 226, 2033, 2059, 2311
TspRI CASTG 2 cut(s) 1185, 1594
Tth111I GACNNNGTC 1 cut(s) 185
Van91I CCANNNNNTGG 2 cut(s) 1472, 1512
Vha464I CTTAAG 1 cut(s) 538
VneI GTGCAC 1 cut(s) 1176
VpaK11BI GGWCC 5 cut(s) 432, 697, 729, 1597, 2550
VspI ATTAAT 1 cut(s) 288
XapI RAATTY 7 cut(s) 172, 386, 763, 1192, 1668, 1734, 2604
XceI RCATGY 5 cut(s) 787, 1276, 1558, 2207, 2322
XcmI CCANNNNNNNNNTGG 1 cut(s) 1607
XmnI GAANNNNTTC 2 cut(s) 272, 1695
XspI CTAG 4 cut(s) 465, 557, 1334, 1652
Zsp2I ATGCAT 2 cut(s) 1378, 2320
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.