Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0007173

Physical Location & Seq

Genomic Coordinates Forward (+)

1944112 .. 1952594

Gene Structure 8483 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00334700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGCGAAACCTCCAGAATTTAAATCTTCAGCACAACATGCTTCCCATCTACTGTCAAATACCTTCATGGATATGTTGCAATTTGGAAGGTAATGGAAAAGATATGTCCAACGACGATTTTAGCAGTACCTCAGTTGAAATGGATGTATATGAAACCACCATTCAGAAGAATGATGAAAATCGTTTTCACACAGGCTTTCATCATAGCTCATCAAGTATAGTTGGGCCTTCATCTAACAGTAGGTGTTTCACAACTCGGAGATCAGCTGGCCGGTGGAAGCGACAGTTCTTGCAGAGGAGAGCTCGTCAAGAGCGCTTAAATAACAGCAGAAAGTCGAAAGGTCTGGATCTTCCTAAGCTGCACATGAAGGAGGATGAAGACTGCAAACCAGGCAATATAGATGCTACTTTTGAATCATATCGTGAAAGTGCACTGGACATTATAAATTTGGATGATGATAATGATAAAAGTTTACTTTCTGGAGAAGATGGTGTAAACGTCTCCCATGCTGCACATCATGACATGTGTTCGAAGAAGGAGGAGCTTTCTGTAAGAAGTTGCTCATCTCTCAGGGTTAACTCTACTCTAGTAGATAATGGTGATAAAAAGGATTGTTACGAGAGTGATGCATCGTCAACTTGCAATCAAGAGGTTACTGGTGAGCATGATGACGTGCCATATTCAGGAAAATCCAAATGCAGTTCAAAGTCCAAGAGGCCACGAGATGGGGATCTTGATAATAGGAATCTTCAGGATCCCAAACGTTGGAAGTGTGGAGATTGTAGTTCAAGCCTATCTTGCAGAAACATGTCTTGCAAATATAGTAATGTGTCATTTTGCAGTGCTGAGGACCATCTTCCAGATGGCTTTTATGATGCAGGACGTGACAGGCCCTTCATGCCACTACAGAGTTATGAGCAAATTTTCCATCTCGACTCACGTGAAGTTATTCTTGTGGACAGGCTAAGGGATAAAGAGTTGGATGGAATTTTGTGCTCTGCCCGAGATATGGTGTCTCAATTGAAGCAGTTAAATGGTTTAAATACAGATAGAGATCGGGATGATGAGCTACAGATTGCATTATATCTTGCTCTATTTGTATCAGATCATTTTGGAGGGACTGATAGGGCGGCTCTTGCTGAAAGGAGACGAAGAGCTGGTGGTGGTTCAATATCCAGGAAGCCTTTTGTATGCACCTGCTCAATTAGGAACTCTGAATCTATTAGTTTGAACCCCAAACAGTCTCCGGAGACTGTTGAAGATATTGCCTTTTCTGATATATGTGAGAAATCTCTCCGTTCTATCAAAGCCAGACAAAAATCCGTTGTAGTACCTATAGGAACATTGCAGTTTGGTGTTTGTAGGCATAGAGCATTGCTACTGAAGTACCTATGTGATCGGATGGAACCTCCAGTCCCTTGTGAGCTTGTCAGAGGATACCTGGATTTCATGCCACATGCTTGGAATATTATATCAGTCAAGAAAAATGACTCAACCAAGAGAGGTGACTCAATTAAGGGAGGTGACTTGGTTGAGAGAGATGACTCACGGATTCGCATGGTTGTTGATGCATGTCGTCCACATGATGTAAGAGAGGAGACAGATCCTGAATATTATTGCAGGTATATTCCTCTCAGTCGGGCCAAGGTTTCTTTCTCTGGAAGCAGCCCTGCTGATGTTTGTTTGTTTCCTTCATTGTCCTCTTCGGATGAAACTCAAACTGAATCCGGTAGTTCTCTCATTCGGTGTAAATATGGGTCGGCTGACGCAGCAGCAAAGATGCGTACTCTGGAGGTATATGGGACCTCAGTGGATGATATTAGGAACTTTGAATACAGCTGCTTGGGTGAAGTTAGAATTTTAGGTGCTTTGCAACACCCCTGCATAGTAGAGATGTATGGACACAGTATATCATCCAAGTGGGCTCCTTCTATGGATGATAATTATAATTCTGGGCACCGTATATTGCAATCTGTAATTTTCATGGAGTATATAAACGGGGGTTCCTTAAAGGGTTACATAGAAAAGCTATCTAAAGCAGGTGAGAAGCATGTCCCTGTGGAGTTAGCTTTAAGCATTGCTAAGAATGTTGCATGTGCACTGGTGGAGTTGCACTCAAAACACATTATTCATCGTGACATAAAAAGTGCAAACATTTTGATTGATATCGATAGGAAGACAGCTGATGGAACACCTGTTGTGAAGCTCTGTGATTTTGATAGGGCAGTGCCTCTTAGCTCGTACTTGCATACATGCTGTATTGCCCATGTTGGGATACCTCCTCCTGATGTTTGTGTTGGAACACCTCGCTGGATGGCTCCAGAGGTTCTGCGGGCAATGCATAAACAAAATATTTATGGATTGGAAGTTGATATCTGGTCATTTGGATGCCTTCTTTTGGAGATGTTGACTTTGCAGATTCCTTACTTGGGATTATCTGAATTAGAGATTCATGACTGCCTATCGATGGGAAAACGACCCAAGTTAACAGATAACTTGGAGGCGCTTCGGCCATTGGAGAAGCCTGCAATGGCTCAATCTACTGAAGAGCTTGAGCAAACAGAAGCTGACTTAGATGTACTAAGATTTCTGGTTGACTTGTTCTGCCAATGTACTGAGGAGAATCCGCAAAGTCGTCCAACGGCTGACAGCCTCTACAAATTGTTGCTCGAACGCAGCACCCAGTTTACAAGTTCAAAAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EDR1 LRR_8 Pkinase

Protein Analysis

901

Amino Acids

101.29

Weight (kDa)

5.95

Isoelectric Point (pI)

52.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EDR1_CTR1_ARMC3_pept	PF14381	426 - 493	1.6e-11	EDR1/CTR1/ARMC3, peptidase-like
Pkinase	PF00069	612 - 886	9.4e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	613 - 886	5.9e-25	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007173)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04210
fragaria_vesca	FvH4_4g01620 FvH4_4g01620 FvH4_4g01620 FvH4_4g01620 FvH4_4g01620
malus_domestica	MD13G1201100.v1.1 MD16G1200600.v1.1
prunus_persica	Prupe.1G022600_v2.0.a1 Prupe.1G022600_v2.0.a1 Prupe.1G022600_v2.0.a1 Prupe.1G022600_v2.0.a1
pyrus_communis	pycom13g17450 pycom16g16960
rosa_chinensis	RchiOBHm_Chr4g0388191
rosa_laevigata	RLG00000010075
rosa_multiflora	Rmu_sc0001564.1_g000006
rosa_roxburghii	Rroxscaffold_5G00334700
rosa_rugosa	Rorug03G0315900 Rorug03G0316000
rosa_samantha	Rh4AG021500 Rh4BG015600 Rh4CG021700 Rh4DG016400
rosa_wichuraiana	Rw4G001410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	443, 1947
AarI	CACCTGC	2 cut(s)	1205, 2030
Acc36I	ACCTGC	3 cut(s)	1205, 1611, 2030
AccB1I	GGYRCC	1 cut(s)	1956
AccB7I	CCANNNNNTGG	2 cut(s)	725, 765
AccIII	TCCGGA	1 cut(s)	1246
AciI	CCGC	3 cut(s)	1130, 2332, 2627
AclI	AACGTT	1 cut(s)	763
AclWI	GGATC	5 cut(s)	354, 738, 749, 762, 1598
AcoI	YGGCCR	2 cut(s)	268, 2510
AcsI	RAATTY	5 cut(s)	16, 445, 921, 987, 1857
AcuI	CTGAAG	4 cut(s)	11, 734, 1403, 2565
AcvI	CACGTG	1 cut(s)	941
AfaI	GTAC	7 cut(s)	127, 1332, 1388, 1786, 2243, 2580, 2614
AfeI	AGCGCT	1 cut(s)	314
AfiI	CCNNNNNNNGG	8 cut(s)	683, 725, 765, 1009, 2271, 2398, 2429, 2467
AflIII	ACRYGT	2 cut(s)	522, 807
AjiI	CACGTC	2 cut(s)	673, 884
AjnI	CCWGG	3 cut(s)	388, 1175, 1440
AjuI	GAANNNNNNNTTGG	2 cut(s)	1637, 1669
AloI	GAACNNNNNNTCC	2 cut(s)	1398, 1430
Alw21I	GWGCWC	4 cut(s)	304, 433, 998, 2101
Alw26I	GTCTC	6 cut(s)	505, 1020, 1141, 1244, 1248, 1592
Alw44I	GTGCAC	2 cut(s)	429, 2097
AlwI	GGATC	5 cut(s)	354, 738, 749, 762, 1598
AlwNI	CAGNNNCTG	2 cut(s)	1607, 2567
Ama87I	CYCGRG	1 cut(s)	1002
Aor13HI	TCCGGA	1 cut(s)	1246
Aor51HI	AGCGCT	1 cut(s)	314
AoxI	GGCC	6 cut(s)	224, 268, 716, 890, 1641, 2510
ApaLI	GTGCAC	2 cut(s)	429, 2097
ApeKI	GCWGC	7 cut(s)	358, 509, 1665, 1769, 1772, 1839, 2676
ApoI	RAATTY	5 cut(s)	16, 445, 921, 987, 1857
Asp700I	GAANNNNTTC	1 cut(s)	948
AspLEI	GCGC	2 cut(s)	315, 2506
AspS9I	GGNCC	5 cut(s)	224, 850, 891, 1641, 1803
AsuHPI	GGTGA	6 cut(s)	611, 671, 1517, 1535, 1859, 2054
AsuII	TTCGAA	1 cut(s)	530
AvaI	CYCGRG	1 cut(s)	1002
AvaII	GGWCC	2 cut(s)	850, 1803
BaeGI	GKGCMC	3 cut(s)	433, 1959, 2101
BaeI	ACNNNNGTAYC	2 cut(s)	1370, 1403
BamHI	GGATCC	1 cut(s)	754
BanI	GGYRCC	1 cut(s)	1956
BanII	GRGCYC	2 cut(s)	304, 1927
BauI	CACGAG	1 cut(s)	720
BbrPI	CACGTG	1 cut(s)	941
BbsI	GAAGAC	2 cut(s)	384, 2183
Bbv12I	GWGCWC	4 cut(s)	304, 433, 998, 2101
BbvCI	CCTCAGC	1 cut(s)	846
BbvI	GCAGC	7 cut(s)	345, 496, 1677, 1781, 1784, 1826, 2688
BceAI	ACGGC	1 cut(s)	2658
BcgI	CGANNNNNNTGC	2 cut(s)	608, 642
BciT130I	CCWGG	3 cut(s)	390, 1177, 1442
BciVI	GTATCC	2 cut(s)	1430, 2268
BcoDI	GTCTC	6 cut(s)	505, 1020, 1141, 1244, 1248, 1592
BfaI	CTAG	1 cut(s)	587
BfmI	CTRYAG	3 cut(s)	905, 1070, 1335
BfoI	RGCGCY	2 cut(s)	316, 2507
BfuAI	ACCTGC	3 cut(s)	1205, 1611, 2030
BfuI	GTATCC	2 cut(s)	1430, 2268
BisI	GCNGC	8 cut(s)	359, 510, 1131, 1666, 1770, 1773, 1840, 2677
BlsI	GCNGC	8 cut(s)	360, 511, 1132, 1667, 1771, 1774, 1841, 2678
Bme1390I	CCNGG	3 cut(s)	390, 1177, 1442
Bme18I	GGWCC	2 cut(s)	850, 1803
BmeT110I	CYCGRG	1 cut(s)	1002
BmgBI	CACGTC	2 cut(s)	673, 884
BmgT120I	GGNCC	5 cut(s)	224, 850, 891, 1641, 1803
BmiI	GGNNCC	7 cut(s)	756, 1407, 1804, 1926, 1958, 2005, 2319
BmrFI	CCNGG	3 cut(s)	390, 1177, 1442
BmrI	ACTGGG	1 cut(s)	2677
BmsI	GCATC	7 cut(s)	391, 616, 638, 865, 1558, 1770, 2378
BmuI	ACTGGG	1 cut(s)	2677
BpiI	GAAGAC	2 cut(s)	384, 2183
BplI	GAGNNNNNCTC	4 cut(s)	286, 318, 2099, 2131
BpmI	CTGGAG	4 cut(s)	501, 1395, 1811, 2304
Bpu10I	CCTNAGC	3 cut(s)	354, 846, 965
Bpu14I	TTCGAA	1 cut(s)	530
BpuEI	CTTGAG	1 cut(s)	2573
Bsa29I	ATCGAT	2 cut(s)	2169, 2465
BsaAI	YACGTR	1 cut(s)	941
BsaBI	GATNNNNATC	4 cut(s)	177, 729, 1053, 2165
BsaJI	CCNNGG	1 cut(s)	1644
BsaWI	WCCGGW	2 cut(s)	1246, 1727
BsaXI	ACNNNNNCTCC	2 cut(s)	289, 319
Bsc4I	CCNNNNNNNGG	8 cut(s)	683, 725, 765, 1009, 2271, 2398, 2429, 2467
Bse118I	RCCGGY	1 cut(s)	270
Bse1I	ACTGG	5 cut(s)	438, 661, 1412, 2106, 2683
Bse3DI	GCAATG	5 cut(s)	1343, 1373, 2076, 2343, 2535
Bse8I	GATNNNNATC	4 cut(s)	177, 729, 1053, 2165
BseAI	TCCGGA	1 cut(s)	1246
BseBI	CCWGG	3 cut(s)	390, 1177, 1442
BseCI	ATCGAT	2 cut(s)	2169, 2465
BseDI	CCNNGG	1 cut(s)	1644
BseJI	GATNNNNATC	4 cut(s)	177, 729, 1053, 2165
BseLI	CCNNNNNNNGG	8 cut(s)	683, 725, 765, 1009, 2271, 2398, 2429, 2467
BseMI	GCAATG	5 cut(s)	1343, 1373, 2076, 2343, 2535
BseMII	CTCAG	6 cut(s)	144, 583, 837, 1648, 1821, 2607
BseNI	ACTGG	5 cut(s)	438, 661, 1412, 2106, 2683
BseRI	GAGGAG	5 cut(s)	310, 554, 1610, 2271, 2633
BseSI	GKGCMC	3 cut(s)	433, 1959, 2101
BseXI	GCAGC	7 cut(s)	345, 496, 1677, 1781, 1784, 1826, 2688
BsgI	GTGCAG	2 cut(s)	344, 495
BshFI	GGCC	6 cut(s)	226, 270, 718, 892, 1643, 2512
BshNI	GGYRCC	1 cut(s)	1956
BshVI	ATCGAT	2 cut(s)	2169, 2465
BsiHKAI	GWGCWC	4 cut(s)	304, 433, 998, 2101
BsiHKCI	CYCGRG	1 cut(s)	1002
BsiSI	CCGG	3 cut(s)	271, 1247, 1728
BslFI	GGGAC	4 cut(s)	1132, 1400, 1816, 2039
BslI	CCNNNNNNNGG	8 cut(s)	683, 725, 765, 1009, 2271, 2398, 2429, 2467
BsmAI	GTCTC	6 cut(s)	505, 1020, 1141, 1244, 1248, 1592
BsmBI	CGTCTC	2 cut(s)	505, 1141
BsmFI	GGGAC	4 cut(s)	1132, 1400, 1816, 2039
BsnI	GGCC	6 cut(s)	226, 270, 718, 892, 1643, 2512
BsoBI	CYCGRG	1 cut(s)	1002
Bsp119I	TTCGAA	1 cut(s)	530
Bsp1286I	GDGCHC	6 cut(s)	304, 433, 998, 1927, 1959, 2101
Bsp13I	TCCGGA	1 cut(s)	1246
Bsp143I	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
BspACI	CCGC	3 cut(s)	1130, 2332, 2627
BspANI	GGCC	6 cut(s)	226, 270, 718, 892, 1643, 2512
BspCNI	CTCAG	6 cut(s)	143, 582, 838, 1647, 1820, 2608
BspDI	ATCGAT	2 cut(s)	2169, 2465
BspEI	TCCGGA	1 cut(s)	1246
BspHI	TCATGA	2 cut(s)	517, 2452
BspLI	GGNNCC	7 cut(s)	756, 1407, 1804, 1926, 1958, 2005, 2319
BspMI	ACCTGC	3 cut(s)	1205, 1611, 2030
BspPI	GGATC	5 cut(s)	354, 738, 749, 762, 1598
BspQI	GCTCTTC	2 cut(s)	1147, 2541
BspT104I	TTCGAA	1 cut(s)	530
BspT107I	GGYRCC	1 cut(s)	1956
BsrDI	GCAATG	5 cut(s)	1343, 1373, 2076, 2343, 2535
BsrFI	RCCGGY	1 cut(s)	270
BsrI	ACTGG	5 cut(s)	438, 661, 1412, 2106, 2683
BssAI	RCCGGY	1 cut(s)	270
BssECI	CCNNGG	1 cut(s)	1644
BssMI	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
BssSI	CACGAG	1 cut(s)	720
BssT1I	CCWWGG	1 cut(s)	1644
Bst2BI	CACGAG	1 cut(s)	720
Bst2UI	CCWGG	3 cut(s)	390, 1177, 1442
Bst4CI	ACNGT	7 cut(s)	53, 239, 285, 1242, 1255, 1907, 1961
Bst6I	CTCTTC	3 cut(s)	1147, 1708, 2541
BstAPI	GCANNNNNTGC	1 cut(s)	37
BstBAI	YACGTR	1 cut(s)	941
BstBI	TTCGAA	1 cut(s)	530
BstC8I	GCNNGC	3 cut(s)	268, 2334, 2526
BstH2I	RGCGCY	2 cut(s)	316, 2507
BstHHI	GCGC	2 cut(s)	315, 2506
BstKTI	GATC	8 cut(s)	263, 349, 733, 757, 1057, 1108, 1399, 1606
BstMAI	GTCTC	6 cut(s)	505, 1020, 1141, 1244, 1248, 1592
BstMBI	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
BstMWI	GCNNNNNNNGC	7 cut(s)	37, 390, 798, 898, 1136, 1769, 2338
BstNI	CCWGG	3 cut(s)	390, 1177, 1442
BstNSI	RCATGY	8 cut(s)	40, 526, 811, 1460, 1575, 2054, 2097, 2256
BstSCI	CCNGG	3 cut(s)	388, 1175, 1440
BstSFI	CTRYAG	3 cut(s)	905, 1070, 1335
BstSLI	GKGCMC	3 cut(s)	433, 1959, 2101
BstV1I	GCAGC	7 cut(s)	345, 496, 1677, 1781, 1784, 1826, 2688
BstV2I	GAAGAC	2 cut(s)	384, 2183
BstX2I	RGATCY	4 cut(s)	346, 730, 754, 1603
BstXI	CCANNNNNNTGG	1 cut(s)	1461
BstYI	RGATCY	4 cut(s)	346, 730, 754, 1603
Bsu15I	ATCGAT	2 cut(s)	2169, 2465
BsuI	GTATCC	2 cut(s)	1430, 2268
BsuRI	GGCC	6 cut(s)	226, 270, 718, 892, 1643, 2512
BsuTUI	ATCGAT	2 cut(s)	2169, 2465
BtrI	CACGTC	2 cut(s)	673, 884
BtsI	GCAGTG	2 cut(s)	847, 2232
BtsIMutI	CAGTG	5 cut(s)	431, 847, 1815, 2099, 2232
BveI	ACCTGC	3 cut(s)	1205, 1611, 2030
Cac8I	GCNNGC	3 cut(s)	268, 2334, 2526
CaiI	CAGNNNCTG	2 cut(s)	1607, 2567
CciI	TCATGA	2 cut(s)	517, 2452
CfoI	GCGC	2 cut(s)	315, 2506
Cfr10I	RCCGGY	1 cut(s)	270
Cfr13I	GGNCC	5 cut(s)	224, 850, 891, 1641, 1803
ClaI	ATCGAT	2 cut(s)	2169, 2465
CseI	GACGC	1 cut(s)	1775
Csp6I	GTAC	7 cut(s)	126, 1331, 1387, 1785, 2242, 2579, 2613
CviQI	GTAC	7 cut(s)	126, 1331, 1387, 1785, 2242, 2579, 2613
DpnI	GATC	8 cut(s)	262, 348, 732, 756, 1056, 1107, 1398, 1605
DpnII	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
DraI	TTTAAA	2 cut(s)	21, 1041
EaeI	YGGCCR	2 cut(s)	268, 2510
Eam1104I	CTCTTC	3 cut(s)	1147, 1708, 2541
EarI	CTCTTC	3 cut(s)	1147, 1708, 2541
Ecl136II	GAGCTC	1 cut(s)	302
Eco130I	CCWWGG	1 cut(s)	1644
Eco24I	GRGCYC	2 cut(s)	304, 1927
Eco32I	GATATC	2 cut(s)	2167, 2374
Eco47I	GGWCC	2 cut(s)	850, 1803
Eco47III	AGCGCT	1 cut(s)	314
Eco53kI	GAGCTC	1 cut(s)	302
Eco57I	CTGAAG	4 cut(s)	11, 734, 1403, 2565
Eco72I	CACGTG	1 cut(s)	941
Eco88I	CYCGRG	1 cut(s)	1002
EcoICRI	GAGCTC	1 cut(s)	302
EcoO109I	RGGNCCY	2 cut(s)	891, 1803
EcoRII	CCWGG	3 cut(s)	388, 1175, 1440
EcoRV	GATATC	2 cut(s)	2167, 2374
EcoT14I	CCWWGG	1 cut(s)	1644
EcoT22I	ATGCAT	3 cut(s)	631, 1573, 2343
EcoT38I	GRGCYC	2 cut(s)	304, 1927
ErhI	CCWWGG	1 cut(s)	1644
Esp3I	CGTCTC	2 cut(s)	505, 1141
FalI	AAGNNNNNCTT	4 cut(s)	781, 813, 936, 968
FaqI	GGGAC	4 cut(s)	1132, 1400, 1816, 2039
FauI	CCCGC	1 cut(s)	2325
Fnu4HI	GCNGC	8 cut(s)	359, 510, 1131, 1666, 1770, 1773, 1840, 2677
FriOI	GRGCYC	2 cut(s)	304, 1927
Fsp4HI	GCNGC	8 cut(s)	359, 510, 1131, 1666, 1770, 1773, 1840, 2677
FspBI	CTAG	1 cut(s)	587
GlaI	GCGC	2 cut(s)	314, 2505
GluI	GCNGC	8 cut(s)	359, 510, 1131, 1666, 1770, 1773, 1840, 2677
GsuI	CTGGAG	4 cut(s)	501, 1395, 1811, 2304
HaeII	RGCGCY	2 cut(s)	316, 2507
HaeIII	GGCC	6 cut(s)	226, 270, 718, 892, 1643, 2512
HapII	CCGG	3 cut(s)	271, 1247, 1728
HgaI	GACGC	1 cut(s)	1775
HhaI	GCGC	2 cut(s)	315, 2506
Hin6I	GCGC	2 cut(s)	313, 2504
HinP1I	GCGC	2 cut(s)	313, 2504
HincII	GTYRAC	5 cut(s)	577, 636, 2409, 2487, 2596
HindII	GTYRAC	5 cut(s)	577, 636, 2409, 2487, 2596
HpaI	GTTAAC	2 cut(s)	577, 2487
HpaII	CCGG	3 cut(s)	271, 1247, 1728
HphI	GGTGA	6 cut(s)	611, 671, 1517, 1535, 1859, 2054
Hpy188I	TCNGA	9 cut(s)	165, 258, 1105, 1216, 1276, 1401, 1433, 1708, 2440
Hpy99I	CGWCG	1 cut(s)	116
HpyAV	CCTTC	9 cut(s)	72, 80, 237, 361, 529, 904, 1701, 1938, 2402
HpyCH4III	ACNGT	7 cut(s)	53, 239, 285, 1242, 1255, 1907, 1961
HpyCH4IV	ACGT	5 cut(s)	498, 672, 763, 883, 940
HpyF10VI	GCNNNNNNNGC	7 cut(s)	37, 390, 798, 898, 1136, 1769, 2338
HpySE526I	ACGT	5 cut(s)	498, 672, 763, 883, 940
HspAI	GCGC	2 cut(s)	313, 2504
Kpn2I	TCCGGA	1 cut(s)	1246
KspAI	GTTAAC	2 cut(s)	577, 2487
Kzo9I	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
LguI	GCTCTTC	2 cut(s)	1147, 2541
LmnI	GCTCC	3 cut(s)	541, 1930, 2323
Lsp1109I	GCAGC	7 cut(s)	345, 496, 1677, 1781, 1784, 1826, 2688
LweI	GCATC	7 cut(s)	391, 616, 638, 865, 1558, 1770, 2378
MaeI	CTAG	1 cut(s)	587
MaeII	ACGT	5 cut(s)	498, 672, 763, 883, 940
MaeIII	GTNAC	7 cut(s)	614, 652, 884, 1505, 1523, 2015, 2135
MalI	GATC	8 cut(s)	262, 348, 732, 756, 1056, 1107, 1398, 1605
MboI	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
MfeI	CAATTG	1 cut(s)	1019
MflI	RGATCY	4 cut(s)	346, 730, 754, 1603
MhlI	GDGCHC	6 cut(s)	304, 433, 998, 1927, 1959, 2101
MlyI	GAGTC	4 cut(s)	929, 1484, 1502, 1538
MmeI	TCCRAC	5 cut(s)	132, 746, 960, 2278, 2663
Mph1103I	ATGCAT	3 cut(s)	631, 1573, 2343
MroI	TCCGGA	1 cut(s)	1246
MroXI	GAANNNNTTC	1 cut(s)	948
MseI	TTAA	9 cut(s)	20, 317, 576, 1031, 1040, 1515, 2009, 2072, 2486
MslI	CAYNNNNRTG	3 cut(s)	70, 1918, 2386
MspA1I	CMGCKG	3 cut(s)	266, 1839, 2183
MspI	CCGG	3 cut(s)	271, 1247, 1728
MspR9I	CCNGG	3 cut(s)	390, 1177, 1442
MunI	CAATTG	1 cut(s)	1019
MvaI	CCWGG	3 cut(s)	390, 1177, 1442
MwoI	GCNNNNNNNGC	7 cut(s)	37, 390, 798, 898, 1136, 1769, 2338
NdeII	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
NlaIV	GGNNCC	7 cut(s)	756, 1407, 1804, 1926, 1958, 2005, 2319
NmuCI	GTSAC	4 cut(s)	884, 1505, 1523, 2135
NsiI	ATGCAT	3 cut(s)	631, 1573, 2343
NspI	RCATGY	8 cut(s)	40, 526, 811, 1460, 1575, 2054, 2097, 2256
NspV	TTCGAA	1 cut(s)	530
PagI	TCATGA	2 cut(s)	517, 2452
PaqCI	CACCTGC	2 cut(s)	1205, 2030
PciI	ACATGT	2 cut(s)	522, 807
PciSI	GCTCTTC	2 cut(s)	1147, 2541
PdmI	GAANNNNTTC	1 cut(s)	948
PfeI	GAWTC	8 cut(s)	413, 745, 1217, 1552, 1724, 2419, 2449, 2623
PflMI	CCANNNNNTGG	2 cut(s)	725, 765
PfoI	TCCNGGA	1 cut(s)	1175
PkrI	GCNGC	8 cut(s)	360, 511, 1132, 1667, 1771, 1774, 1841, 2678
PleI	GAGTC	4 cut(s)	929, 1484, 1502, 1538
PmaCI	CACGTG	1 cut(s)	941
PmlI	CACGTG	1 cut(s)	941
PpsI	GAGTC	4 cut(s)	929, 1484, 1502, 1538
Ppu21I	YACGTR	1 cut(s)	941
PpuMI	RGGWCCY	1 cut(s)	1803
PscI	ACATGT	2 cut(s)	522, 807
PsiI	TTATAA	2 cut(s)	443, 1947
Psp124BI	GAGCTC	1 cut(s)	304
Psp1406I	AACGTT	1 cut(s)	763
Psp5II	RGGWCCY	1 cut(s)	1803
Psp6I	CCWGG	3 cut(s)	388, 1175, 1440
PspCI	CACGTG	1 cut(s)	941
PspGI	CCWGG	3 cut(s)	388, 1175, 1440
PspN4I	GGNNCC	7 cut(s)	756, 1407, 1804, 1926, 1958, 2005, 2319
PspPI	GGNCC	5 cut(s)	224, 850, 891, 1641, 1803
PspPPI	RGGWCCY	1 cut(s)	1803
PsrI	GAACNNNNNNTAC	2 cut(s)	1817, 1849
PstNI	CAGNNNCTG	2 cut(s)	1607, 2567
PsuI	RGATCY	4 cut(s)	346, 730, 754, 1603
PvuII	CAGCTG	3 cut(s)	266, 1839, 2183
RsaI	GTAC	7 cut(s)	127, 1332, 1388, 1786, 2243, 2580, 2614
RsaNI	GTAC	7 cut(s)	126, 1331, 1387, 1785, 2242, 2579, 2613
RseI	CAYNNNNRTG	3 cut(s)	70, 1918, 2386
SacI	GAGCTC	1 cut(s)	304
SapI	GCTCTTC	2 cut(s)	1147, 2541
SaqAI	TTAA	9 cut(s)	20, 317, 576, 1031, 1040, 1515, 2009, 2072, 2486
SatI	GCNGC	8 cut(s)	359, 510, 1131, 1666, 1770, 1773, 1840, 2677
Sau3AI	GATC	8 cut(s)	260, 346, 730, 754, 1054, 1105, 1396, 1603
Sau96I	GGNCC	5 cut(s)	224, 850, 891, 1641, 1803
SchI	GAGTC	4 cut(s)	929, 1484, 1502, 1538
ScrFI	CCNGG	3 cut(s)	390, 1177, 1442
SduI	GDGCHC	6 cut(s)	304, 433, 998, 1927, 1959, 2101
SfaNI	GCATC	7 cut(s)	391, 616, 638, 865, 1558, 1770, 2378
SfcI	CTRYAG	3 cut(s)	905, 1070, 1335
SfuI	TTCGAA	1 cut(s)	530
SinI	GGWCC	2 cut(s)	850, 1803
SmiI	ATTTAAAT	1 cut(s)	21
SmiMI	CAYNNNNRTG	3 cut(s)	70, 1918, 2386
SmlI	CTYRAG	1 cut(s)	2552
SmoI	CTYRAG	1 cut(s)	2552
SsiI	CCGC	3 cut(s)	1130, 2332, 2627
SspI	AATATT	3 cut(s)	1468, 1613, 2353
SspMI	CTAG	1 cut(s)	587
SstI	GAGCTC	1 cut(s)	304
StyD4I	CCNGG	3 cut(s)	388, 1175, 1440
StyI	CCWWGG	1 cut(s)	1644
SwaI	ATTTAAAT	1 cut(s)	21
TaaI	ACNGT	7 cut(s)	53, 239, 285, 1242, 1255, 1907, 1961
TaiI	ACGT	5 cut(s)	501, 675, 766, 886, 943
TaqI	TCGA	6 cut(s)	335, 530, 933, 2169, 2465, 2670
TatI	WGTACW	2 cut(s)	2578, 2612
TauI	GCSGC	1 cut(s)	1133
TfiI	GAWTC	8 cut(s)	413, 745, 1217, 1552, 1724, 2419, 2449, 2623
Tru1I	TTAA	9 cut(s)	20, 317, 576, 1031, 1040, 1515, 2009, 2072, 2486
Tru9I	TTAA	9 cut(s)	20, 317, 576, 1031, 1040, 1515, 2009, 2072, 2486
TscAI	CASTG	5 cut(s)	438, 847, 1815, 2106, 2232
TseFI	GTSAC	4 cut(s)	884, 1505, 1523, 2135
TseI	GCWGC	7 cut(s)	358, 509, 1665, 1769, 1772, 1839, 2676
Tsp45I	GTSAC	4 cut(s)	884, 1505, 1523, 2135
TspGWI	ACGGA	3 cut(s)	1286, 1312, 1564
TspRI	CASTG	5 cut(s)	438, 847, 1815, 2106, 2232
Van91I	CCANNNNNTGG	2 cut(s)	725, 765
VneI	GTGCAC	2 cut(s)	429, 2097
VpaK11BI	GGWCC	2 cut(s)	850, 1803
XapI	RAATTY	5 cut(s)	16, 445, 921, 987, 1857
XceI	RCATGY	8 cut(s)	40, 526, 811, 1460, 1575, 2054, 2097, 2256
XcmI	CCANNNNNNNNNTGG	1 cut(s)	860
XmnI	GAANNNNTTC	1 cut(s)	948
XspI	CTAG	1 cut(s)	587
Zsp2I	ATGCAT	3 cut(s)	631, 1573, 2343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.