AT1G04700

PB1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0012803
Physical Location & Seq
Forward (+)
1316139 .. 1321000
4862 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G04700.3

Sequence Viewer

Length: 3129 bp
ATGAGAATGGAGTTTCCTGGCAGCTCCAATCAGCATTTAGGTAGGGATAGGTTCAATGGAGAAGTTGGTTGCGGTAATAACTGTTCTCAGACAGGAGAGGAATTTTCAAATGAGTTTTTGAGGGATTTTGGTGCTCAACGAAGACTACAACATGGTGGTGTTAACAGAAATGTTGAGGGTAATTATAATAATCGCCATCTTGTTTACGAGGATTTCAACAGAATTCTTGGCCTTCAAAGAGTTGATTCCAACATGTCAGAAGGTATTAATTCCTCGAATGGTTACTTTGCTGAGTCAAATGTTGCAGACTCACCTCGGAAGATGTTTCAAACTGCAATATCAGATGTTTATTTGCCTGAAGTATTGAAGCTTCTTTGTAGCTTCGGGGGAAGGATCTTACAGCGGCCTGGTGATGGCAAGCTTAGATACATTGGAGGGGAGACTCGGATTATCTCAATACGCAAACATGTTGGATTAAACGAATTGATGCACAAGACTTATGCTTTGTGCAACCATCCGCATACAATCAAGTATCAATTACCAGGAGAAGATCTTGATGCCCTTATATCGGTTTGCTCAGATGAGGATCTTCTTCATATGATTGAAGAGTATCAAGAAGCTGAAACAAAGGCTGGATCCCAGAGGATTAGGGTCTTTCTTGTACCTTCCACAGAATCATCAGAGAGTCCTAAAATTTTCCATGAAAGGAATATGAACATAAACCGAAACACGAACCAGCAGACGGATATAGATCATTATCAGTATGTTTCAGCTCTTAATGGTATTGTAGATGTGAGTCCTCAAAAGAGTTCCAGCGGCCAAAGTGGAACAAGTCAGACCACACAATTTGGGAATGCTTCAGAATTTAGCCCTACATTTCATCTTCGAGACTCGCCTACTTCTGTTCATACATGGGAACACAAAGACAGCAACAGTCCAACCTTCATGAAACCATATGGGAACACGAATGCTGTTCATTTTATGCCGAAAATGCAGATTCCCAGGAACTCGTTTGGTCAACAATCTCCTCCAACATCTCCTTTTTCAGTCCACAAGAGAGCAAACACCGACGTTCCTTATTTTGCCGATCAAAATGGTTTCTTTGACCCTTACTTGGCTGCTCCAAACTTCCCACAGCAAAATAGGTTCTTTTTTGAGACTACTACACAAAAGCAGAAGCATCCAGAAGTGAATCTTCATGACCGGAGGCCAAGCGATGATATTTACCCCCATGGCCAAGCTTATATCGGAGCCGAGAAAATGACGCTTAAGAAAAACGCTCTTTCTGATCCGCAGCTGCATGATGAGAGCCAAATCAACAATGGGTTAGAAGCATTTACCAAACAACCATGGAAAATATTGAGAAAGAATCTACGTGTTGTGGCTACATCAAAGTGGGAAGATAGTGATGATATCTATTTCAATAATCCAGAAGGCAAGAGATGCAAGGAGCTTGAACTCACCAAGGAAGTTCCTAATAGTTGGATCAATCGCGATAATAATCCCGATTCTTTTGATCAGGCAACAAAGAAACAGGATGGTAGTAACAGTAATAGCTCCTTCAGTCCGAATTATTTCAGTCCGAATCATCAACCAGCTGCTCAGATTACTTCAAGTGATTCACAAGATTCAGGAAGCTCAGTGTTCTCTTTATCAGTTAACACCAACGAAAATTATCTTGATTGTTCGAGGGAAAAATTTAATGGTTTCCAGCATGACATGTCACTAGATATTCTCATCAGAAGCCACACTTCAGCTACAGATCAACTATGTAGTACAACCAAGTCAAGTGATAAAGCAGATTACTCCTCACCCAATACAAATTTCCCCGTGGTATTTCTGAGACAGGAACCTATGATTCCGAGACATGATTTGGAGACAAATAGCGATGATTCAGATACTCAAAAATCTCTTCCTAGAGAAGAGAGTATTCACTATAGTGGATTGCCACTTAGGAAGGTGGGAAGTAGAGAAACTACTTTTATGCACACGCAGGGGTCAGATGATTTCTTCAAAAGCAAGCTGCTTGGTCCACAGTTGATAGTTGAGGATGTGACGAACGAAGTAATTTCAGATAATCTCTTATCAGCTACTATTGTCCCTCAAGTAAATAGGGAGTCCGATGATGATCACAAATCCTACACAAGGGAGAAAGAGATTACAAATGCGGATCATGAATCAGAAATGGAGGAAAAGTACAAGAAAAGCAGAAACACCGATGATTCATTCAGCGAAGCTGCAATGGTTGAAATCGAAGCTGGAATATATGGCTTACAGATAATTAAAAACACTGATCTTGAAGACTTACACGAGCTTGGATCTGGTACATTTGGAACTGTTTACTATGGGAAGTGGAGAGGAACTGATGTTGCTATCAAGAGGATAAAGAATAGTTGTTTCTCTGGTGGATCATCCGAGCAAGCACGGCAGACTAAAGATTTCTGGAGAGAAGCTCGGATATTGGCGAATCTTCACCATCCTAACGTAGTGGCCTTTTATGGAGTTGTACCAGATGGACCTGGTGGAACAATGGCAACAGTGACTGAGTATATGGTGAACGGATCTTTGAGGCATGTCTTGCAGAGAAAAGACAGATTACTTGATAGGCGCAAAAAACTGATGATAACTCTTGATTCTGCATTTGGCATGGAGTATCTACATATGAAAAATATTGTTCATTTTGATCTTAAATGCGATAACTTGCTTGTAAACTTGAGGGATCCACAACGACCCATTTGCAAGGTTGGAGATTTCGGATTGTCGAGAATAAAACGAAACACGCTTGTCTCTGGTGGAGTAAGAGGAACCCTTCCATGGATGGCACCAGAGCTGCTAAACGGAAGCAGCAATCGGGTCTCAGAGAAAGTCGATGTTTTCTCATTTGGTATCGTGATGTGGGAGATCTTGACAGGCGAAGAACCCTATGCGAATCTGCATTGCGGTGCCATCATTGGTGGAATTGTGAACAATACGTTAAGACCTCCGGTGCCTGAACGGTGTGAAGCTGAGTGGAGGAAGTTGATGGAGCAATGCTGGTCATTCGATCCAGGAGTACGGCCATCGTTTACGGAGATTGTTGAACGACTTCGATCAATGACTGTTGCCTTGCAACCCAAGCGAAGAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PB1 Pkinase_Tyr

Protein Analysis

1042

Amino Acids

118.01

Weight (kDa)

6.04

Isoelectric Point (pI)

47.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 138 - 222 1.6e-19 PB1 domain
Pkinase PF00069 767 - 907 1.1e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 769 - 915 2e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012803)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04700 AT1G04700 AT1G04700
fragaria_vesca FvH4_4g05890
malus_domestica MD13G1231300.v1.1 MD16G1235800.v1.1
prunus_persica Prupe.1G061200_v2.0.a1
pyrus_communis pycom13g20420
rosa_chinensis RchiOBHm_Chr4g0396991
rosa_laevigata RLG00000009461
rosa_multiflora Rmu_sc0002963.1_g000016
rosa_roxburghii Rroxscaffold_5G00341980
rosa_rugosa Rorug03G0346000
rosa_samantha Rh4AG075900 Rh4BG072300 Rh4CG080600 Rh4DG069700
rosa_wichuraiana Rw4G006090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 186
AccB1I GGYRCC 3 cut(s) 2821, 2942, 2986
AccII CGCG 1 cut(s) 1494
AciI CCGC 7 cut(s) 72, 403, 518, 816, 1292, 2168, 2940
AcoI YGGCCR 3 cut(s) 817, 1234, 3056
AcsI RAATTY 6 cut(s) 101, 222, 693, 863, 1697, 1822
AcuI CTGAAG 4 cut(s) 378, 843, 1546, 1737
AfaI GTAC 6 cut(s) 663, 1777, 2198, 2326, 2508, 3054
AfiI CCNNNNNNNGG 6 cut(s) 413, 568, 742, 1114, 2145, 2814
AflII CTTAAG 1 cut(s) 1268
AflIII ACRYGT 4 cut(s) 252, 466, 1375, 1719
AjnI CCWGG 6 cut(s) 16, 406, 541, 1001, 2518, 3046
AjuI GAANNNNNNNTTGG 2 cut(s) 1808, 1840
AleI CACNNNNGTG 1 cut(s) 1938
Alw21I GWGCWC 1 cut(s) 136
Alw26I GTCTC 8 cut(s) 434, 882, 1151, 1837, 1858, 1871, 2791, 2860
AlwNI CAGNNNCTG 1 cut(s) 2543
AoxI GGCC 7 cut(s) 229, 404, 817, 1208, 1234, 2490, 3056
ApeKI GCWGC 9 cut(s) 21, 1118, 1294, 1297, 1598, 2023, 2237, 2830, 2844
ApoI RAATTY 6 cut(s) 101, 222, 693, 863, 1697, 1822
ArsI GACNNNNNNTTYG 2 cut(s) 487, 519
AseI ATTAAT 1 cut(s) 267
Asp700I GAANNNNTTC 2 cut(s) 1574, 3084
AspLEI GCGC 1 cut(s) 2610
AspS9I GGNCC 2 cut(s) 2030, 2516
AsuHPI GGTGA 6 cut(s) 303, 422, 1453, 1803, 2465, 2566
AvaII GGWCC 2 cut(s) 2030, 2516
BalI TGGCCA 1 cut(s) 1236
BamHI GGATCC 2 cut(s) 635, 2719
BanI GGYRCC 3 cut(s) 2821, 2942, 2986
BarI GAAGNNNNNNTAC 2 cut(s) 354, 386
BauI CACGAG 1 cut(s) 2309
BbsI GAAGAC 2 cut(s) 148, 2307
Bbv12I GWGCWC 1 cut(s) 136
BbvI GCAGC 9 cut(s) 33, 1105, 1284, 1306, 1585, 2010, 2224, 2817, 2856
BceAI ACGGC 2 cut(s) 2441, 3071
BcgI CGANNNNNNTGC 2 cut(s) 2718, 2752
BciT130I CCWGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
BclI TGATCA 2 cut(s) 1516, 2128
BcoDI GTCTC 8 cut(s) 434, 882, 1151, 1837, 1858, 1871, 2791, 2860
BfaI CTAG 2 cut(s) 1727, 1917
BfmI CTRYAG 2 cut(s) 1758, 1936
BfrI CTTAAG 1 cut(s) 1268
BglII AGATCT 2 cut(s) 550, 2901
Bme1390I CCNGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
Bme18I GGWCC 2 cut(s) 2030, 2516
BmgT120I GGNCC 2 cut(s) 2030, 2516
BmiI GGNNCC 8 cut(s) 637, 1252, 1851, 2721, 2806, 2823, 2944, 2988
BmrFI CCNGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
BmsI GCATC 4 cut(s) 477, 547, 1189, 1433
BpiI GAAGAC 2 cut(s) 148, 2307
BplI GAGNNNNNCTC 2 cut(s) 2437, 2469
BpmI CTGGAG 1 cut(s) 2464
BpuEI CTTGAG 2 cut(s) 2088, 2734
BsaAI YACGTR 1 cut(s) 1376
BsaBI GATNNNNATC 5 cut(s) 585, 750, 756, 1500, 2127
BsaI GGTCTC 1 cut(s) 2860
BsaJI CCNNGG 7 cut(s) 314, 1001, 1231, 1349, 1464, 1830, 2813
BsaWI WCCGGW 2 cut(s) 1203, 2983
BsaXI ACNNNNNCTCC 2 cut(s) 2180, 2210
Bsc4I CCNNNNNNNGG 6 cut(s) 413, 568, 742, 1114, 2145, 2814
Bse3DI GCAATG 3 cut(s) 2247, 2935, 3035
Bse8I GATNNNNATC 5 cut(s) 585, 750, 756, 1500, 2127
BseBI CCWGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
BseDI CCNNGG 7 cut(s) 314, 1001, 1231, 1349, 1464, 1830, 2813
BseGI GGATG 7 cut(s) 514, 1180, 1543, 2056, 2411, 2476, 2823
BseJI GATNNNNATC 5 cut(s) 585, 750, 756, 1500, 2127
BseLI CCNNNNNNNGG 6 cut(s) 413, 568, 742, 1114, 2145, 2814
BseMI GCAATG 3 cut(s) 2247, 2935, 3035
BseMII CTCAG 9 cut(s) 101, 282, 591, 1616, 1653, 1832, 2535, 2871, 2997
BseRI GAGGAG 2 cut(s) 1017, 1798
BseXI GCAGC 9 cut(s) 33, 1105, 1284, 1306, 1585, 2010, 2224, 2817, 2856
Bsh1236I CGCG 1 cut(s) 1494
BshFI GGCC 7 cut(s) 231, 406, 819, 1210, 1236, 2492, 3058
BshNI GGYRCC 3 cut(s) 2821, 2942, 2986
BsiHKAI GWGCWC 1 cut(s) 136
BsiSI CCGG 2 cut(s) 1204, 2984
BslFI GGGAC 1 cut(s) 2084
BslI CCNNNNNNNGG 6 cut(s) 413, 568, 742, 1114, 2145, 2814
BsmAI GTCTC 8 cut(s) 434, 882, 1151, 1837, 1858, 1871, 2791, 2860
BsmFI GGGAC 1 cut(s) 2084
BsmI GAATGC 2 cut(s) 859, 973
BsnI GGCC 7 cut(s) 231, 406, 819, 1210, 1236, 2492, 3058
Bso31I GGTCTC 1 cut(s) 2860
Bsp1286I GDGCHC 1 cut(s) 136
Bsp19I CCATGG 3 cut(s) 1231, 1349, 2813
Bsp68I TCGCGA 1 cut(s) 1494
BspACI CCGC 7 cut(s) 72, 403, 518, 816, 1292, 2168, 2940
BspANI GGCC 7 cut(s) 231, 406, 819, 1210, 1236, 2492, 3058
BspCNI CTCAG 9 cut(s) 100, 283, 590, 1615, 1652, 1833, 2536, 2870, 2998
BspFNI CGCG 1 cut(s) 1494
BspHI TCATGA 3 cut(s) 945, 1198, 2173
BspLI GGNNCC 8 cut(s) 637, 1252, 1851, 2721, 2806, 2823, 2944, 2988
BspT107I GGYRCC 3 cut(s) 2821, 2942, 2986
BspTI CTTAAG 1 cut(s) 1268
BspTNI GGTCTC 1 cut(s) 2860
BsrDI GCAATG 3 cut(s) 2247, 2935, 3035
BssECI CCNNGG 7 cut(s) 314, 1001, 1231, 1349, 1464, 1830, 2813
BssSI CACGAG 1 cut(s) 2309
BssT1I CCWWGG 4 cut(s) 1231, 1349, 1464, 2813
Bst2BI CACGAG 1 cut(s) 2309
Bst2UI CCWGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
Bst4CI ACNGT 8 cut(s) 83, 935, 1550, 2037, 2338, 2539, 2997, 3100
Bst6I CTCTTC 3 cut(s) 600, 1917, 1917
BstAFI CTTAAG 1 cut(s) 1268
BstAPI GCANNNNNTGC 2 cut(s) 1443, 2578
BstBAI YACGTR 1 cut(s) 1376
BstC8I GCNNGC 3 cut(s) 419, 2021, 2421
BstDSI CCRYGG 4 cut(s) 1231, 1349, 1830, 2813
BstENI CCTNNNNNAGG 1 cut(s) 2143
BstF5I GGATG 7 cut(s) 514, 1180, 1543, 2056, 2411, 2476, 2823
BstFNI CGCG 1 cut(s) 1494
BstHHI GCGC 1 cut(s) 2610
BstMAI GTCTC 8 cut(s) 434, 882, 1151, 1837, 1858, 1871, 2791, 2860
BstMWI GCNNNNNNNGC 5 cut(s) 991, 1443, 2425, 2578, 3115
BstNI CCWGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
BstNSI RCATGY 4 cut(s) 256, 470, 1723, 2576
BstSCI CCNGG 6 cut(s) 16, 406, 541, 1001, 2518, 3046
BstSFI CTRYAG 2 cut(s) 1758, 1936
BstUI CGCG 1 cut(s) 1494
BstV1I GCAGC 9 cut(s) 33, 1105, 1284, 1306, 1585, 2010, 2224, 2817, 2856
BstV2I GAAGAC 2 cut(s) 148, 2307
BstX2I RGATCY 8 cut(s) 393, 550, 586, 635, 2318, 2561, 2719, 2901
BstYI RGATCY 8 cut(s) 393, 550, 586, 635, 2318, 2561, 2719, 2901
BsuRI GGCC 7 cut(s) 231, 406, 819, 1210, 1236, 2492, 3058
BtgI CCRYGG 4 cut(s) 1231, 1349, 1830, 2813
BtgZI GCGATG 2 cut(s) 1230, 1902
BtsCI GGATG 7 cut(s) 514, 1180, 1543, 2056, 2411, 2476, 2823
BtsIMutI CAGTG 3 cut(s) 1647, 2289, 2544
BtuMI TCGCGA 1 cut(s) 1494
Cac8I GCNNGC 3 cut(s) 419, 2021, 2421
CaiI CAGNNNCTG 1 cut(s) 2543
CciI TCATGA 3 cut(s) 945, 1198, 2173
CfoI GCGC 1 cut(s) 2610
Cfr13I GGNCC 2 cut(s) 2030, 2516
CseI GACGC 1 cut(s) 1273
CsiI ACCWGGT 1 cut(s) 2518
Csp6I GTAC 6 cut(s) 662, 1776, 2197, 2325, 2507, 3053
CspCI CAANNNNNGTGG 2 cut(s) 829, 864
CviQI GTAC 6 cut(s) 662, 1776, 2197, 2325, 2507, 3053
EaeI YGGCCR 3 cut(s) 817, 1234, 3056
Eam1104I CTCTTC 3 cut(s) 600, 1917, 1917
EarI CTCTTC 3 cut(s) 600, 1917, 1917
Eco130I CCWWGG 4 cut(s) 1231, 1349, 1464, 2813
Eco31I GGTCTC 1 cut(s) 2860
Eco32I GATATC 1 cut(s) 1414
Eco47I GGWCC 2 cut(s) 2030, 2516
Eco57I CTGAAG 4 cut(s) 378, 843, 1546, 1737
EcoNI CCTNNNNNAGG 1 cut(s) 2143
EcoRI GAATTC 1 cut(s) 222
EcoRII CCWGG 6 cut(s) 16, 406, 541, 1001, 2518, 3046
EcoRV GATATC 1 cut(s) 1414
EcoT14I CCWWGG 4 cut(s) 1231, 1349, 1464, 2813
ErhI CCWWGG 4 cut(s) 1231, 1349, 1464, 2813
FalI AAGNNNNNCTT 4 cut(s) 1179, 1211, 1735, 1767
FaqI GGGAC 1 cut(s) 2084
FauNDI CATATG 3 cut(s) 597, 955, 2661
FbaI TGATCA 2 cut(s) 1516, 2128
FokI GGATG 7 cut(s) 501, 1167, 1550, 2063, 2398, 2463, 2830
FspBI CTAG 2 cut(s) 1727, 1917
GlaI GCGC 1 cut(s) 2609
GsuI CTGGAG 1 cut(s) 2464
HaeIII GGCC 7 cut(s) 231, 406, 819, 1210, 1236, 2492, 3058
HapII CCGG 2 cut(s) 1204, 2984
HgaI GACGC 1 cut(s) 1273
HhaI GCGC 1 cut(s) 2610
Hin6I GCGC 1 cut(s) 2608
HinP1I GCGC 1 cut(s) 2608
HincII GTYRAC 3 cut(s) 163, 1019, 1660
HindII GTYRAC 3 cut(s) 163, 1019, 1660
HindIII AAGCTT 3 cut(s) 368, 419, 1239
HpaI GTTAAC 2 cut(s) 163, 1660
HpaII CCGG 2 cut(s) 1204, 2984
HphI GGTGA 6 cut(s) 303, 422, 1453, 1803, 2465, 2566
Hpy99I CGWCG 1 cut(s) 1073
HpyAV CCTTC 9 cut(s) 242, 254, 384, 675, 952, 1427, 1570, 1951, 2819
HpyCH4III ACNGT 8 cut(s) 83, 935, 1550, 2037, 2338, 2539, 2997, 3100
HpyCH4IV ACGT 4 cut(s) 1071, 1375, 2484, 2972
HpyF10VI GCNNNNNNNGC 5 cut(s) 991, 1443, 2425, 2578, 3115
HpySE526I ACGT 4 cut(s) 1071, 1375, 2484, 2972
HspAI GCGC 1 cut(s) 2608
Ksp22I TGATCA 2 cut(s) 1516, 2128
KspAI GTTAAC 2 cut(s) 163, 1660
LmnI GCTCC 6 cut(s) 29, 1126, 1250, 1450, 1562, 3025
Lsp1109I GCAGC 9 cut(s) 33, 1105, 1284, 1306, 1585, 2010, 2224, 2817, 2856
LweI GCATC 4 cut(s) 477, 547, 1189, 1433
MabI ACCWGGT 1 cut(s) 2518
MaeI CTAG 2 cut(s) 1727, 1917
MaeII ACGT 4 cut(s) 1071, 1375, 2484, 2972
MaeIII GTNAC 5 cut(s) 281, 1544, 1722, 2053, 2539
MflI RGATCY 8 cut(s) 393, 550, 586, 635, 2318, 2561, 2719, 2901
MhlI GDGCHC 1 cut(s) 136
MlsI TGGCCA 1 cut(s) 1236
MluNI TGGCCA 1 cut(s) 1236
MlyI GAGTC 7 cut(s) 302, 302, 436, 694, 805, 884, 2126
MmeI TCCRAC 6 cut(s) 273, 451, 962, 1055, 1463, 2725
Mox20I TGGCCA 1 cut(s) 1236
MroXI GAANNNNTTC 2 cut(s) 1574, 3084
MscI TGGCCA 1 cut(s) 1236
MslI CAYNNNNRTG 4 cut(s) 156, 1393, 1938, 2940
Msp20I TGGCCA 1 cut(s) 1236
MspA1I CMGCKG 4 cut(s) 403, 816, 1297, 1598
MspCI CTTAAG 1 cut(s) 1268
MspI CCGG 2 cut(s) 1204, 2984
MspR9I CCNGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
Mva1269I GAATGC 2 cut(s) 859, 973
MvaI CCWGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
MvnI CGCG 1 cut(s) 1494
MwoI GCNNNNNNNGC 5 cut(s) 991, 1443, 2425, 2578, 3115
NcoI CCATGG 3 cut(s) 1231, 1349, 2813
NdeI CATATG 3 cut(s) 597, 955, 2661
NlaIV GGNNCC 8 cut(s) 637, 1252, 1851, 2721, 2806, 2823, 2944, 2988
NmeAIII GCCGAG 1 cut(s) 1279
NmuCI GTSAC 3 cut(s) 1722, 2053, 2539
NruI TCGCGA 1 cut(s) 1494
NspI RCATGY 4 cut(s) 256, 470, 1723, 2576
OliI CACNNNNGTG 1 cut(s) 1938
PagI TCATGA 3 cut(s) 945, 1198, 2173
PciI ACATGT 3 cut(s) 252, 466, 1719
PctI GAATGC 2 cut(s) 859, 973
PdmI GAANNNNTTC 2 cut(s) 1574, 3084
PfoI TCCNGGA 1 cut(s) 3046
PleI GAGTC 7 cut(s) 301, 302, 436, 693, 804, 884, 2125
PpsI GAGTC 7 cut(s) 301, 302, 436, 693, 804, 884, 2125
Ppu21I YACGTR 1 cut(s) 1376
PscI ACATGT 3 cut(s) 252, 466, 1719
PshBI ATTAAT 1 cut(s) 267
PsiI TTATAA 1 cut(s) 186
Psp6I CCWGG 6 cut(s) 16, 406, 541, 1001, 2518, 3046
PspGI CCWGG 6 cut(s) 16, 406, 541, 1001, 2518, 3046
PspN4I GGNNCC 8 cut(s) 637, 1252, 1851, 2721, 2806, 2823, 2944, 2988
PspPI GGNCC 2 cut(s) 2030, 2516
PsrI GAACNNNNNNTAC 2 cut(s) 67, 99
PstNI CAGNNNCTG 1 cut(s) 2543
PsuI RGATCY 8 cut(s) 393, 550, 586, 635, 2318, 2561, 2719, 2901
PvuII CAGCTG 2 cut(s) 1297, 1598
RruI TCGCGA 1 cut(s) 1494
RsaI GTAC 6 cut(s) 663, 1777, 2198, 2326, 2508, 3054
RsaNI GTAC 6 cut(s) 662, 1776, 2197, 2325, 2507, 3053
RseI CAYNNNNRTG 4 cut(s) 156, 1393, 1938, 2940
Sau96I GGNCC 2 cut(s) 2030, 2516
SchI GAGTC 7 cut(s) 302, 302, 436, 694, 805, 884, 2126
ScrFI CCNGG 6 cut(s) 18, 408, 543, 1003, 2520, 3048
SduI GDGCHC 1 cut(s) 136
SexAI ACCWGGT 1 cut(s) 2518
SfaNI GCATC 4 cut(s) 477, 547, 1189, 1433
SfcI CTRYAG 2 cut(s) 1758, 1936
SinI GGWCC 2 cut(s) 2030, 2516
SmiMI CAYNNNNRTG 4 cut(s) 156, 1393, 1938, 2940
SmlI CTYRAG 3 cut(s) 1268, 2103, 2713
SmoI CTYRAG 3 cut(s) 1268, 2103, 2713
SsiI CCGC 7 cut(s) 72, 403, 518, 816, 1292, 2168, 2940
SspI AATATT 2 cut(s) 1359, 2671
SspMI CTAG 2 cut(s) 1727, 1917
StyD4I CCNGG 6 cut(s) 16, 406, 541, 1001, 2518, 3046
StyI CCWWGG 4 cut(s) 1231, 1349, 1464, 2813
TaaI ACNGT 8 cut(s) 83, 935, 1550, 2037, 2338, 2539, 2997, 3100
TaiI ACGT 4 cut(s) 1074, 1378, 2487, 2975
TaqI TCGA 8 cut(s) 275, 886, 1688, 2253, 2762, 2868, 3042, 3088
TatI WGTACW 2 cut(s) 1775, 2196
TauI GCSGC 2 cut(s) 406, 819
TscAI CASTG 3 cut(s) 1647, 2296, 2544
TseFI GTSAC 3 cut(s) 1722, 2053, 2539
TseI GCWGC 9 cut(s) 21, 1118, 1294, 1297, 1598, 2023, 2237, 2830, 2844
Tsp45I GTSAC 3 cut(s) 1722, 2053, 2539
TspGWI ACGGA 4 cut(s) 758, 2574, 2853, 3083
TspRI CASTG 3 cut(s) 1647, 2296, 2544
Vha464I CTTAAG 1 cut(s) 1268
VpaK11BI GGWCC 2 cut(s) 2030, 2516
VspI ATTAAT 1 cut(s) 267
XagI CCTNNNNNAGG 1 cut(s) 2143
XapI RAATTY 6 cut(s) 101, 222, 693, 863, 1697, 1822
XceI RCATGY 4 cut(s) 256, 470, 1723, 2576
XcmI CCANNNNNNNNNTGG 1 cut(s) 1319
XmnI GAANNNNTTC 2 cut(s) 1574, 3084
XspI CTAG 2 cut(s) 1727, 1917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.