PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04700 AT1G04700 AT1G04700 |
| fragaria_vesca | FvH4_4g05890 |
| malus_domestica | MD13G1231300.v1.1 MD16G1235800.v1.1 |
| prunus_persica | Prupe.1G061200_v2.0.a1 |
| pyrus_communis | pycom13g20420 |
| rosa_chinensis | RchiOBHm_Chr4g0396991 |
| rosa_laevigata | RLG00000009461 |
| rosa_multiflora | Rmu_sc0002963.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00341980 |
| rosa_rugosa | Rorug03G0346000 |
| rosa_samantha | Rh4AG075900 Rh4BG072300 Rh4CG080600 Rh4DG069700 |
| rosa_wichuraiana | Rw4G006090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 2746 |
| AccB1I | GGYRCC | 2 cut(s) | 2746, 3061 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 602 |
| AccIII | TCCGGA | 2 cut(s) | 2158, 3280 |
| AciI | CCGC | 8 cut(s) | 40, 434, 838, 978, 1490, 2336, 2845, 3358 |
| AcoI | YGGCCR | 1 cut(s) | 3296 |
| AcsI | RAATTY | 9 cut(s) | 125, 311, 1102, 1225, 1360, 1885, 2084, 2319, 2786 |
| AcuI | CTGAAG | 3 cut(s) | 1136, 1893, 2109 |
| AfeI | AGCGCT | 1 cut(s) | 3236 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 602, 1786, 2332, 3054 |
| AhlI | ACTAGT | 3 cut(s) | 5, 374, 3022 |
| AjnI | CCWGG | 2 cut(s) | 730, 2758 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 671, 703 |
| AleI | CACNNNNGTG | 1 cut(s) | 3023 |
| AluBI | AGCT | 9 cut(s) | 173, 332, 430, 610, 808, 1240, 2315, 2411, 2783 |
| AluI | AGCT | 9 cut(s) | 173, 332, 430, 610, 808, 1240, 2315, 2411, 2783 |
| Alw21I | GWGCWC | 1 cut(s) | 1857 |
| Alw26I | GTCTC | 7 cut(s) | 621, 1651, 2353, 2357, 2387, 3100, 3282 |
| Ama87I | CYCGRG | 1 cut(s) | 447 |
| Aor13HI | TCCGGA | 2 cut(s) | 2158, 3280 |
| Aor51HI | AGCGCT | 1 cut(s) | 3236 |
| AoxI | GGCC | 6 cut(s) | 28, 593, 1500, 2756, 3218, 3296 |
| ApeKI | GCWGC | 4 cut(s) | 1237, 1751, 2411, 3237 |
| ApoI | RAATTY | 9 cut(s) | 125, 311, 1102, 1225, 1360, 1885, 2084, 2319, 2786 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 47, 79, 908, 940, 2864, 2896 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2217 |
| Asp718I | GGTACC | 1 cut(s) | 2746 |
| AspA2I | CCTAGG | 1 cut(s) | 590 |
| AspLEI | GCGC | 1 cut(s) | 3237 |
| AspS9I | GGNCC | 7 cut(s) | 29, 775, 911, 1331, 1626, 1942, 2756 |
| AsuII | TTCGAA | 1 cut(s) | 409 |
| AvaI | CYCGRG | 1 cut(s) | 447 |
| AvaII | GGWCC | 5 cut(s) | 775, 911, 1331, 1626, 1942 |
| AvrII | CCTAGG | 1 cut(s) | 590 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 697, 730 |
| BamHI | GGATCC | 3 cut(s) | 259, 2959, 3283 |
| BanI | GGYRCC | 2 cut(s) | 2746, 3061 |
| BanII | GRGCYC | 2 cut(s) | 875, 1221 |
| BbsI | GAAGAC | 4 cut(s) | 398, 418, 689, 2298 |
| Bbv12I | GWGCWC | 1 cut(s) | 1857 |
| BbvCI | CCTCAGC | 1 cut(s) | 1302 |
| BbvI | GCAGC | 4 cut(s) | 1249, 1738, 2398, 3224 |
| BceAI | ACGGC | 2 cut(s) | 2892, 3075 |
| BciT130I | CCWGG | 2 cut(s) | 732, 2760 |
| BclI | TGATCA | 3 cut(s) | 196, 1249, 1324 |
| BcoDI | GTCTC | 7 cut(s) | 621, 1651, 2353, 2357, 2387, 3100, 3282 |
| BcuI | ACTAGT | 3 cut(s) | 5, 374, 3022 |
| BfaI | CTAG | 7 cut(s) | 6, 375, 459, 591, 950, 2729, 3023 |
| BfmI | CTRYAG | 4 cut(s) | 143, 565, 2439, 2778 |
| BfoI | RGCGCY | 1 cut(s) | 3238 |
| BglII | AGATCT | 1 cut(s) | 3141 |
| BisI | GCNGC | 6 cut(s) | 839, 1238, 1490, 1752, 2412, 3238 |
| BlnI | CCTAGG | 1 cut(s) | 590 |
| BlsI | GCNGC | 6 cut(s) | 840, 1239, 1491, 1753, 2413, 3239 |
| BmcAI | AGTACT | 3 cut(s) | 1120, 1472, 2838 |
| Bme1390I | CCNGG | 2 cut(s) | 732, 2760 |
| Bme18I | GGWCC | 5 cut(s) | 775, 911, 1331, 1626, 1942 |
| BmeT110I | CYCGRG | 1 cut(s) | 447 |
| BmgT120I | GGNCC | 7 cut(s) | 29, 775, 911, 1331, 1626, 1942, 2756 |
| BmiI | GGNNCC | 9 cut(s) | 261, 1218, 1944, 2748, 2961, 3046, 3063, 3159, 3285 |
| BmrFI | CCNGG | 2 cut(s) | 732, 2760 |
| BmrI | ACTGGG | 1 cut(s) | 1441 |
| BmsI | GCATC | 9 cut(s) | 37, 1288, 1552, 1572, 1683, 1924, 2084, 2464, 2511 |
| BmuI | ACTGGG | 1 cut(s) | 1441 |
| BoxI | GACNNNNGTC | 1 cut(s) | 957 |
| BpiI | GAAGAC | 4 cut(s) | 398, 418, 689, 2298 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 113, 145 |
| BpmI | CTGGAG | 7 cut(s) | 159, 1709, 1823, 2704, 2781, 3171, 3332 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1302 |
| Bpu14I | TTCGAA | 1 cut(s) | 409 |
| BpuEI | CTTGAG | 5 cut(s) | 504, 1640, 2064, 2088, 2558 |
| Bsa29I | ATCGAT | 1 cut(s) | 1480 |
| BsaAI | YACGTR | 1 cut(s) | 3329 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2154 |
| BsaI | GGTCTC | 2 cut(s) | 2357, 3282 |
| BsaJI | CCNNGG | 5 cut(s) | 590, 962, 1629, 2056, 3053 |
| BsaWI | WCCGGW | 2 cut(s) | 2158, 3280 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1388, 1418, 1629, 1659 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 602, 1786, 2332, 3054 |
| Bse118I | RCCGGY | 1 cut(s) | 620 |
| Bse3DI | GCAATG | 1 cut(s) | 1278 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2154 |
| BseAI | TCCGGA | 2 cut(s) | 2158, 3280 |
| BseBI | CCWGG | 2 cut(s) | 732, 2760 |
| BseCI | ATCGAT | 1 cut(s) | 1480 |
| BseDI | CCNNGG | 5 cut(s) | 590, 962, 1629, 2056, 3053 |
| BseGI | GGATG | 5 cut(s) | 442, 901, 1087, 2716, 3063 |
| BseJI | GATNNNNATC | 1 cut(s) | 2154 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 602, 1786, 2332, 3054 |
| BseMI | GCAATG | 1 cut(s) | 1278 |
| BseXI | GCAGC | 4 cut(s) | 1249, 1738, 2398, 3224 |
| BseYI | CCCAGC | 1 cut(s) | 2049 |
| BshFI | GGCC | 6 cut(s) | 30, 595, 1502, 2758, 3220, 3298 |
| BshNI | GGYRCC | 2 cut(s) | 2746, 3061 |
| BshVI | ATCGAT | 1 cut(s) | 1480 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1857 |
| BsiHKCI | CYCGRG | 1 cut(s) | 447 |
| BsiSI | CCGG | 3 cut(s) | 621, 2159, 3281 |
| BslFI | GGGAC | 2 cut(s) | 1126, 2614 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 602, 1786, 2332, 3054 |
| BsmAI | GTCTC | 7 cut(s) | 621, 1651, 2353, 2357, 2387, 3100, 3282 |
| BsmFI | GGGAC | 2 cut(s) | 1126, 2614 |
| BsmI | GAATGC | 2 cut(s) | 1021, 1464 |
| BsnI | GGCC | 6 cut(s) | 30, 595, 1502, 2758, 3220, 3298 |
| Bso31I | GGTCTC | 2 cut(s) | 2357, 3282 |
| BsoBI | CYCGRG | 1 cut(s) | 447 |
| Bsp119I | TTCGAA | 1 cut(s) | 409 |
| Bsp1286I | GDGCHC | 3 cut(s) | 875, 1221, 1857 |
| Bsp13I | TCCGGA | 2 cut(s) | 2158, 3280 |
| Bsp1407I | TGTACA | 1 cut(s) | 109 |
| Bsp19I | CCATGG | 2 cut(s) | 2056, 3053 |
| BspACI | CCGC | 8 cut(s) | 40, 434, 838, 978, 1490, 2336, 2845, 3358 |
| BspANI | GGCC | 6 cut(s) | 30, 595, 1502, 2758, 3220, 3298 |
| BspDI | ATCGAT | 1 cut(s) | 1480 |
| BspEI | TCCGGA | 2 cut(s) | 2158, 3280 |
| BspLI | GGNNCC | 9 cut(s) | 261, 1218, 1944, 2748, 2961, 3046, 3063, 3159, 3285 |
| BspMAI | CTGCAG | 3 cut(s) | 147, 569, 2443 |
| BspT104I | TTCGAA | 1 cut(s) | 409 |
| BspT107I | GGYRCC | 2 cut(s) | 2746, 3061 |
| BspTNI | GGTCTC | 2 cut(s) | 2357, 3282 |
| BsrDI | GCAATG | 1 cut(s) | 1278 |
| BsrFI | RCCGGY | 1 cut(s) | 620 |
| BsrGI | TGTACA | 1 cut(s) | 109 |
| BssAI | RCCGGY | 1 cut(s) | 620 |
| BssECI | CCNNGG | 5 cut(s) | 590, 962, 1629, 2056, 3053 |
| BssT1I | CCWWGG | 4 cut(s) | 590, 1629, 2056, 3053 |
| Bst2UI | CCWGG | 2 cut(s) | 732, 2760 |
| Bst4CI | ACNGT | 7 cut(s) | 193, 713, 2071, 2306, 2578, 2779, 3162 |
| Bst6I | CTCTTC | 3 cut(s) | 1155, 2197, 3261 |
| BstAUI | TGTACA | 1 cut(s) | 109 |
| BstBAI | YACGTR | 1 cut(s) | 3329 |
| BstBI | TTCGAA | 1 cut(s) | 409 |
| BstC8I | GCNNGC | 6 cut(s) | 432, 947, 1132, 1587, 1710, 2500 |
| BstDSI | CCRYGG | 2 cut(s) | 2056, 3053 |
| BstF5I | GGATG | 5 cut(s) | 442, 901, 1087, 2716, 3063 |
| BstH2I | RGCGCY | 1 cut(s) | 3238 |
| BstHHI | GCGC | 1 cut(s) | 3237 |
| BstMAI | GTCTC | 7 cut(s) | 621, 1651, 2353, 2357, 2387, 3100, 3282 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 838, 1693, 2483, 2780 |
| BstNI | CCWGG | 2 cut(s) | 732, 2760 |
| BstNSI | RCATGY | 7 cut(s) | 949, 1130, 1402, 1489, 1589, 2816, 3175 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 957 |
| BstSCI | CCNGG | 2 cut(s) | 730, 2758 |
| BstSFI | CTRYAG | 4 cut(s) | 143, 565, 2439, 2778 |
| BstV1I | GCAGC | 4 cut(s) | 1249, 1738, 2398, 3224 |
| BstV2I | GAAGAC | 4 cut(s) | 398, 418, 689, 2298 |
| BstX2I | RGATCY | 7 cut(s) | 259, 739, 1155, 2558, 2959, 3141, 3283 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 731, 2057 |
| BstYI | RGATCY | 7 cut(s) | 259, 739, 1155, 2558, 2959, 3141, 3283 |
| Bsu15I | ATCGAT | 1 cut(s) | 1480 |
| BsuRI | GGCC | 6 cut(s) | 30, 595, 1502, 2758, 3220, 3298 |
| BsuTUI | ATCGAT | 1 cut(s) | 1480 |
| BtgI | CCRYGG | 2 cut(s) | 2056, 3053 |
| BtsCI | GGATG | 5 cut(s) | 442, 901, 1087, 2716, 3063 |
| BtsI | GCAGTG | 1 cut(s) | 1944 |
| BtsIMutI | CAGTG | 3 cut(s) | 1656, 1944, 2374 |
| Cac8I | GCNNGC | 6 cut(s) | 432, 947, 1132, 1587, 1710, 2500 |
| CfoI | GCGC | 1 cut(s) | 3237 |
| Cfr10I | RCCGGY | 1 cut(s) | 620 |
| Cfr13I | GGNCC | 7 cut(s) | 29, 775, 911, 1331, 1626, 1942, 2756 |
| ClaI | ATCGAT | 1 cut(s) | 1480 |
| CseI | GACGC | 1 cut(s) | 755 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 198, 233, 646, 681 |
| DraI | TTTAAA | 1 cut(s) | 858 |
| EaeI | YGGCCR | 1 cut(s) | 3296 |
| Eam1104I | CTCTTC | 3 cut(s) | 1155, 2197, 3261 |
| EarI | CTCTTC | 3 cut(s) | 1155, 2197, 3261 |
| Eco130I | CCWWGG | 4 cut(s) | 590, 1629, 2056, 3053 |
| Eco147I | AGGCCT | 2 cut(s) | 1502, 3220 |
| Eco24I | GRGCYC | 2 cut(s) | 875, 1221 |
| Eco31I | GGTCTC | 2 cut(s) | 2357, 3282 |
| Eco32I | GATATC | 1 cut(s) | 3313 |
| Eco47I | GGWCC | 5 cut(s) | 775, 911, 1331, 1626, 1942 |
| Eco47III | AGCGCT | 1 cut(s) | 3236 |
| Eco57I | CTGAAG | 3 cut(s) | 1136, 1893, 2109 |
| Eco88I | CYCGRG | 1 cut(s) | 447 |
| EcoO109I | RGGNCCY | 2 cut(s) | 775, 1626 |
| EcoRI | GAATTC | 2 cut(s) | 125, 2084 |
| EcoRII | CCWGG | 2 cut(s) | 730, 2758 |
| EcoRV | GATATC | 1 cut(s) | 3313 |
| EcoT14I | CCWWGG | 4 cut(s) | 590, 1629, 2056, 3053 |
| EcoT22I | ATGCAT | 2 cut(s) | 1587, 3177 |
| EcoT38I | GRGCYC | 2 cut(s) | 875, 1221 |
| ErhI | CCWWGG | 4 cut(s) | 590, 1629, 2056, 3053 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2107, 2139 |
| FaqI | GGGAC | 2 cut(s) | 1126, 2614 |
| FauNDI | CATATG | 4 cut(s) | 514, 786, 1756, 2975 |
| FbaI | TGATCA | 3 cut(s) | 196, 1249, 1324 |
| Fnu4HI | GCNGC | 6 cut(s) | 839, 1238, 1490, 1752, 2412, 3238 |
| FokI | GGATG | 5 cut(s) | 449, 888, 1094, 2703, 3070 |
| FriOI | GRGCYC | 2 cut(s) | 875, 1221 |
| Fsp4HI | GCNGC | 6 cut(s) | 839, 1238, 1490, 1752, 2412, 3238 |
| FspBI | CTAG | 7 cut(s) | 6, 375, 459, 591, 950, 2729, 3023 |
| GlaI | GCGC | 1 cut(s) | 3236 |
| GluI | GCNGC | 6 cut(s) | 839, 1238, 1490, 1752, 2412, 3238 |
| GsaI | CCCAGC | 1 cut(s) | 2053 |
| GsuI | CTGGAG | 7 cut(s) | 159, 1709, 1823, 2704, 2781, 3171, 3332 |
| HaeII | RGCGCY | 1 cut(s) | 3238 |
| HaeIII | GGCC | 6 cut(s) | 30, 595, 1502, 2758, 3220, 3298 |
| HapII | CCGG | 3 cut(s) | 621, 2159, 3281 |
| HgaI | GACGC | 1 cut(s) | 755 |
| HhaI | GCGC | 1 cut(s) | 3237 |
| Hin6I | GCGC | 1 cut(s) | 3235 |
| HinP1I | GCGC | 1 cut(s) | 3235 |
| HincII | GTYRAC | 2 cut(s) | 1732, 3339 |
| HindII | GTYRAC | 2 cut(s) | 1732, 3339 |
| HindIII | AAGCTT | 1 cut(s) | 428 |
| HinfI | GANTC | 8 cut(s) | 293, 491, 1598, 1898, 1990, 2417, 2698, 3242 |
| HpaII | CCGG | 3 cut(s) | 621, 2159, 3281 |
| Hpy166II | GTNNAC | 8 cut(s) | 110, 1534, 1732, 1942, 2221, 2309, 2917, 3339 |
| Hpy8I | GTNNAC | 8 cut(s) | 110, 1534, 1732, 1942, 2221, 2309, 2917, 3339 |
| HpyCH4III | ACNGT | 7 cut(s) | 193, 713, 2071, 2306, 2578, 2779, 3162 |
| HpyCH4IV | ACGT | 1 cut(s) | 3328 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 838, 1693, 2483, 2780 |
| HpySE526I | ACGT | 1 cut(s) | 3328 |
| HspAI | GCGC | 1 cut(s) | 3235 |
| Kpn2I | TCCGGA | 2 cut(s) | 2158, 3280 |
| KpnI | GGTACC | 1 cut(s) | 2750 |
| Ksp22I | TGATCA | 3 cut(s) | 196, 1249, 1324 |
| LmnI | GCTCC | 3 cut(s) | 178, 1216, 1852 |
| Lsp1109I | GCAGC | 4 cut(s) | 1249, 1738, 2398, 3224 |
| LweI | GCATC | 9 cut(s) | 37, 1288, 1552, 1572, 1683, 1924, 2084, 2464, 2511 |
| MaeI | CTAG | 7 cut(s) | 6, 375, 459, 591, 950, 2729, 3023 |
| MaeII | ACGT | 1 cut(s) | 3328 |
| MfeI | CAATTG | 1 cut(s) | 906 |
| MflI | RGATCY | 7 cut(s) | 259, 739, 1155, 2558, 2959, 3141, 3283 |
| MhlI | GDGCHC | 3 cut(s) | 875, 1221, 1857 |
| MlyI | GAGTC | 4 cut(s) | 1592, 1907, 2426, 3236 |
| MmeI | TCCRAC | 1 cut(s) | 1058 |
| Mph1103I | ATGCAT | 2 cut(s) | 1587, 3177 |
| MroI | TCCGGA | 2 cut(s) | 2158, 3280 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2217 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1165, 1269, 2358, 2457, 2721, 3023, 3180 |
| MspA1I | CMGCKG | 3 cut(s) | 332, 978, 2315 |
| MspI | CCGG | 3 cut(s) | 621, 2159, 3281 |
| MspR9I | CCNGG | 2 cut(s) | 732, 2760 |
| MunI | CAATTG | 1 cut(s) | 906 |
| Mva1269I | GAATGC | 2 cut(s) | 1021, 1464 |
| MvaI | CCWGG | 2 cut(s) | 732, 2760 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 838, 1693, 2483, 2780 |
| NcoI | CCATGG | 2 cut(s) | 2056, 3053 |
| NdeI | CATATG | 4 cut(s) | 514, 786, 1756, 2975 |
| NlaIV | GGNNCC | 9 cut(s) | 261, 1218, 1944, 2748, 2961, 3046, 3063, 3159, 3285 |
| NmeAIII | GCCGAG | 1 cut(s) | 2440 |
| NsiI | ATGCAT | 2 cut(s) | 1587, 3177 |
| NspI | RCATGY | 7 cut(s) | 949, 1130, 1402, 1489, 1589, 2816, 3175 |
| NspV | TTCGAA | 1 cut(s) | 409 |
| OliI | CACNNNNGTG | 1 cut(s) | 3023 |
| PaeI | GCATGC | 2 cut(s) | 949, 1589 |
| PceI | AGGCCT | 2 cut(s) | 1502, 3220 |
| PctI | GAATGC | 2 cut(s) | 1021, 1464 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2217 |
| PfeI | GAWTC | 4 cut(s) | 293, 491, 1990, 2698 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 602 |
| PkrI | GCNGC | 6 cut(s) | 840, 1239, 1491, 1753, 2413, 3239 |
| PleI | GAGTC | 4 cut(s) | 1592, 1906, 2425, 3236 |
| PpsI | GAGTC | 4 cut(s) | 1592, 1906, 2425, 3236 |
| Ppu21I | YACGTR | 1 cut(s) | 3329 |
| PpuMI | RGGWCCY | 2 cut(s) | 775, 1626 |
| PshAI | GACNNNNGTC | 1 cut(s) | 957 |
| Psp5II | RGGWCCY | 2 cut(s) | 775, 1626 |
| Psp6I | CCWGG | 2 cut(s) | 730, 2758 |
| PspFI | CCCAGC | 1 cut(s) | 2049 |
| PspGI | CCWGG | 2 cut(s) | 730, 2758 |
| PspN4I | GGNNCC | 9 cut(s) | 261, 1218, 1944, 2748, 2961, 3046, 3063, 3159, 3285 |
| PspPI | GGNCC | 7 cut(s) | 29, 775, 911, 1331, 1626, 1942, 2756 |
| PspPPI | RGGWCCY | 2 cut(s) | 775, 1626 |
| PstI | CTGCAG | 3 cut(s) | 147, 569, 2443 |
| PsuI | RGATCY | 7 cut(s) | 259, 739, 1155, 2558, 2959, 3141, 3283 |
| PvuII | CAGCTG | 2 cut(s) | 332, 2315 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1165, 1269, 2358, 2457, 2721, 3023, 3180 |
| SatI | GCNGC | 6 cut(s) | 839, 1238, 1490, 1752, 2412, 3238 |
| Sau96I | GGNCC | 7 cut(s) | 29, 775, 911, 1331, 1626, 1942, 2756 |
| ScaI | AGTACT | 3 cut(s) | 1120, 1472, 2838 |
| SchI | GAGTC | 4 cut(s) | 1592, 1907, 2426, 3236 |
| ScrFI | CCNGG | 2 cut(s) | 732, 2760 |
| SduI | GDGCHC | 3 cut(s) | 875, 1221, 1857 |
| SfaNI | GCATC | 9 cut(s) | 37, 1288, 1552, 1572, 1683, 1924, 2084, 2464, 2511 |
| SfcI | CTRYAG | 4 cut(s) | 143, 565, 2439, 2778 |
| SfuI | TTCGAA | 1 cut(s) | 409 |
| SinI | GGWCC | 5 cut(s) | 775, 911, 1331, 1626, 1942 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1165, 1269, 2358, 2457, 2721, 3023, 3180 |
| SmlI | CTYRAG | 5 cut(s) | 519, 1619, 2079, 2103, 2537 |
| SmoI | CTYRAG | 5 cut(s) | 519, 1619, 2079, 2103, 2537 |
| SpeI | ACTAGT | 3 cut(s) | 5, 374, 3022 |
| SphI | GCATGC | 2 cut(s) | 949, 1589 |
| SseBI | AGGCCT | 2 cut(s) | 1502, 3220 |
| SsiI | CCGC | 8 cut(s) | 40, 434, 838, 978, 1490, 2336, 2845, 3358 |
| SspI | AATATT | 4 cut(s) | 585, 2138, 2894, 2911 |
| SspMI | CTAG | 7 cut(s) | 6, 375, 459, 591, 950, 2729, 3023 |
| StuI | AGGCCT | 2 cut(s) | 1502, 3220 |
| StyD4I | CCNGG | 2 cut(s) | 730, 2758 |
| StyI | CCWWGG | 4 cut(s) | 590, 1629, 2056, 3053 |
| TaaI | ACNGT | 7 cut(s) | 193, 713, 2071, 2306, 2578, 2779, 3162 |
| TaiI | ACGT | 1 cut(s) | 3331 |
| TaqI | TCGA | 2 cut(s) | 409, 1480 |
| TatI | WGTACW | 6 cut(s) | 109, 1118, 1470, 2018, 2306, 2836 |
| TauI | GCSGC | 2 cut(s) | 841, 1492 |
| TfiI | GAWTC | 4 cut(s) | 293, 491, 1990, 2698 |
| TscAI | CASTG | 3 cut(s) | 1656, 1944, 2374 |
| TseI | GCWGC | 4 cut(s) | 1237, 1751, 2411, 3237 |
| TspGWI | ACGGA | 1 cut(s) | 649 |
| TspRI | CASTG | 3 cut(s) | 1656, 1944, 2374 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 602 |
| VpaK11BI | GGWCC | 5 cut(s) | 775, 911, 1331, 1626, 1942 |
| XapI | RAATTY | 9 cut(s) | 125, 311, 1102, 1225, 1360, 1885, 2084, 2319, 2786 |
| XceI | RCATGY | 7 cut(s) | 949, 1130, 1402, 1489, 1589, 2816, 3175 |
| XmaJI | CCTAGG | 1 cut(s) | 590 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2217 |
| XspI | CTAG | 7 cut(s) | 6, 375, 459, 591, 950, 2729, 3023 |
| ZrmI | AGTACT | 3 cut(s) | 1120, 1472, 2838 |
| Zsp2I | ATGCAT | 2 cut(s) | 1587, 3177 |