PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04700 AT1G04700 AT1G04700 |
| fragaria_vesca | FvH4_4g05890 |
| malus_domestica | MD13G1231300.v1.1 MD16G1235800.v1.1 |
| prunus_persica | Prupe.1G061200_v2.0.a1 |
| pyrus_communis | pycom13g20420 |
| rosa_chinensis | RchiOBHm_Chr4g0396991 |
| rosa_laevigata | RLG00000009461 |
| rosa_multiflora | Rmu_sc0002963.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00341980 |
| rosa_rugosa | Rorug03G0346000 |
| rosa_samantha | Rh4AG075900 Rh4BG072300 Rh4CG080600 Rh4DG069700 |
| rosa_wichuraiana | Rw4G006090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 671, 3052 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 617 |
| AccBSI | CCGCTC | 1 cut(s) | 2656 |
| AccI | GTMKAC | 1 cut(s) | 2571 |
| AcoI | YGGCCR | 2 cut(s) | 2033, 3287 |
| AcuI | CTGAAG | 2 cut(s) | 1154, 2091 |
| AfeI | AGCGCT | 1 cut(s) | 3227 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 347, 617, 1765, 3045 |
| AhlI | ACTAGT | 2 cut(s) | 5, 3013 |
| AjnI | CCWGG | 4 cut(s) | 340, 745, 2302, 2749 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 686, 718 |
| Alw26I | GTCTC | 9 cut(s) | 1056, 1215, 1388, 1492, 1627, 2341, 2348, 2378, 3091 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2411 |
| Ama87I | CYCGRG | 1 cut(s) | 2141 |
| Aor51HI | AGCGCT | 1 cut(s) | 3227 |
| AoxI | GGCC | 6 cut(s) | 608, 926, 2033, 2746, 3209, 3287 |
| ApeKI | GCWGC | 6 cut(s) | 196, 244, 1255, 1440, 2399, 3228 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 923, 955, 2855, 2887 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2205 |
| AspA2I | CCTAGG | 1 cut(s) | 605 |
| AspLEI | GCGC | 2 cut(s) | 1445, 3228 |
| AspS9I | GGNCC | 7 cut(s) | 790, 926, 1234, 1349, 1602, 1924, 2747 |
| AsuC2I | CCSGG | 1 cut(s) | 2032 |
| AsuHPI | GGTGA | 8 cut(s) | 515, 761, 1647, 1748, 2266, 2367, 2696, 2797 |
| AsuII | TTCGAA | 1 cut(s) | 418 |
| AvaI | CYCGRG | 1 cut(s) | 2141 |
| AvaII | GGWCC | 5 cut(s) | 790, 1234, 1349, 1602, 1924 |
| AvrII | CCTAGG | 1 cut(s) | 605 |
| BaeGI | GKGCMC | 1 cut(s) | 890 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3000, 3033 |
| BamHI | GGATCC | 2 cut(s) | 2950, 3274 |
| BanI | GGYRCC | 2 cut(s) | 671, 3052 |
| BauI | CACGAG | 1 cut(s) | 1586 |
| BbsI | GAAGAC | 5 cut(s) | 407, 427, 704, 2286, 3097 |
| BbvI | GCAGC | 6 cut(s) | 208, 256, 1267, 1452, 2411, 3215 |
| BceAI | ACGGC | 2 cut(s) | 3066, 3348 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 661, 695 |
| BciT130I | CCWGG | 4 cut(s) | 342, 747, 2304, 2751 |
| BclI | TGATCA | 3 cut(s) | 1342, 1641, 1990 |
| BcnI | CCSGG | 1 cut(s) | 2032 |
| BcoDI | GTCTC | 9 cut(s) | 1056, 1215, 1388, 1492, 1627, 2341, 2348, 2378, 3091 |
| BcuI | ACTAGT | 2 cut(s) | 5, 3013 |
| BfaI | CTAG | 8 cut(s) | 6, 384, 474, 606, 891, 965, 2810, 3014 |
| BfmI | CTRYAG | 6 cut(s) | 32, 143, 580, 2379, 2430, 2769 |
| BfoI | RGCGCY | 1 cut(s) | 3229 |
| BglII | AGATCT | 1 cut(s) | 3132 |
| BisI | GCNGC | 9 cut(s) | 197, 245, 854, 1256, 1441, 2036, 2400, 2657, 3229 |
| BlnI | CCTAGG | 1 cut(s) | 605 |
| BlpI | GCTNAGC | 1 cut(s) | 1698 |
| BlsI | GCNGC | 9 cut(s) | 198, 246, 855, 1257, 1442, 2037, 2401, 2658, 3230 |
| BmcAI | AGTACT | 1 cut(s) | 2829 |
| Bme1390I | CCNGG | 5 cut(s) | 342, 747, 2032, 2304, 2751 |
| Bme18I | GGWCC | 5 cut(s) | 790, 1234, 1349, 1602, 1924 |
| BmeT110I | CYCGRG | 1 cut(s) | 2141 |
| BmgT120I | GGNCC | 7 cut(s) | 790, 926, 1234, 1349, 1602, 1924, 2747 |
| BmiI | GGNNCC | 9 cut(s) | 673, 927, 1235, 1926, 2952, 3037, 3054, 3150, 3276 |
| BmrFI | CCNGG | 5 cut(s) | 342, 747, 2032, 2304, 2751 |
| BmrI | ACTGGG | 2 cut(s) | 170, 3150 |
| BmuI | ACTGGG | 2 cut(s) | 170, 3150 |
| BoxI | GACNNNNGTC | 1 cut(s) | 972 |
| BpiI | GAAGAC | 5 cut(s) | 407, 427, 704, 2286, 3097 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 113, 145 |
| BpmI | CTGGAG | 8 cut(s) | 973, 1529, 1685, 1802, 2388, 2695, 2772, 3323 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1698 |
| Bpu14I | TTCGAA | 1 cut(s) | 418 |
| BpuEI | CTTGAG | 2 cut(s) | 2046, 2062 |
| BpuMI | CCSGG | 1 cut(s) | 2032 |
| BsaAI | YACGTR | 1 cut(s) | 3320 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2136 |
| BsaI | GGTCTC | 2 cut(s) | 1388, 2348 |
| BsaJI | CCNNGG | 6 cut(s) | 605, 977, 1605, 2575, 2749, 3044 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1412, 1442, 1502, 1532, 1605, 1635, 3137, 3167 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 347, 617, 1765, 3045 |
| Bse3DI | GCAATG | 2 cut(s) | 1296, 1759 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2136 |
| BseBI | CCWGG | 4 cut(s) | 342, 747, 2304, 2751 |
| BseDI | CCNNGG | 6 cut(s) | 605, 977, 1605, 2575, 2749, 3044 |
| BseGI | GGATG | 7 cut(s) | 451, 916, 1105, 1196, 1492, 2707, 3054 |
| BseJI | GATNNNNATC | 1 cut(s) | 2136 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 347, 617, 1765, 3045 |
| BseMI | GCAATG | 2 cut(s) | 1296, 1759 |
| BseRI | GAGGAG | 1 cut(s) | 767 |
| BseSI | GKGCMC | 1 cut(s) | 890 |
| BseX3I | CGGCCG | 1 cut(s) | 2033 |
| BseXI | GCAGC | 6 cut(s) | 208, 256, 1267, 1452, 2411, 3215 |
| BsgI | GTGCAG | 3 cut(s) | 102, 1274, 2418 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2036 |
| BshFI | GGCC | 6 cut(s) | 610, 928, 2035, 2748, 3211, 3289 |
| BshNI | GGYRCC | 2 cut(s) | 671, 3052 |
| BsiEI | CGRYCG | 1 cut(s) | 2036 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2141 |
| BsiSI | CCGG | 2 cut(s) | 2032, 3272 |
| BslFI | GGGAC | 2 cut(s) | 1144, 1247 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 347, 617, 1765, 3045 |
| BsmAI | GTCTC | 9 cut(s) | 1056, 1215, 1388, 1492, 1627, 2341, 2348, 2378, 3091 |
| BsmBI | CGTCTC | 1 cut(s) | 1627 |
| BsmFI | GGGAC | 2 cut(s) | 1144, 1247 |
| BsmI | GAATGC | 1 cut(s) | 1036 |
| BsnI | GGCC | 6 cut(s) | 610, 928, 2035, 2748, 3211, 3289 |
| Bso31I | GGTCTC | 2 cut(s) | 1388, 2348 |
| BsoBI | CYCGRG | 1 cut(s) | 2141 |
| Bsp119I | TTCGAA | 1 cut(s) | 418 |
| Bsp1286I | GDGCHC | 1 cut(s) | 890 |
| Bsp1407I | TGTACA | 1 cut(s) | 109 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1698 |
| Bsp19I | CCATGG | 2 cut(s) | 2575, 3044 |
| BspANI | GGCC | 6 cut(s) | 610, 928, 2035, 2748, 3211, 3289 |
| BspHI | TCATGA | 1 cut(s) | 817 |
| BspLI | GGNNCC | 9 cut(s) | 673, 927, 1235, 1926, 2952, 3037, 3054, 3150, 3276 |
| BspMAI | CTGCAG | 3 cut(s) | 147, 584, 2434 |
| BspT104I | TTCGAA | 1 cut(s) | 418 |
| BspT107I | GGYRCC | 2 cut(s) | 671, 3052 |
| BspTNI | GGTCTC | 2 cut(s) | 1388, 2348 |
| BsrBI | CCGCTC | 1 cut(s) | 2656 |
| BsrDI | GCAATG | 2 cut(s) | 1296, 1759 |
| BsrGI | TGTACA | 1 cut(s) | 109 |
| BssECI | CCNNGG | 6 cut(s) | 605, 977, 1605, 2575, 2749, 3044 |
| BssSI | CACGAG | 1 cut(s) | 1586 |
| BssT1I | CCWWGG | 4 cut(s) | 605, 1605, 2575, 3044 |
| Bst2BI | CACGAG | 1 cut(s) | 1586 |
| Bst2UI | CCWGG | 4 cut(s) | 342, 747, 2304, 2751 |
| Bst4CI | ACNGT | 8 cut(s) | 36, 405, 935, 1209, 2053, 2569, 2770, 3153 |
| Bst6I | CTCTTC | 2 cut(s) | 1173, 3252 |
| BstAUI | TGTACA | 1 cut(s) | 109 |
| BstBAI | YACGTR | 1 cut(s) | 3320 |
| BstBI | TTCGAA | 1 cut(s) | 418 |
| BstC8I | GCNNGC | 4 cut(s) | 962, 1150, 2297, 2491 |
| BstDSI | CCRYGG | 2 cut(s) | 2575, 3044 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 345 |
| BstF5I | GGATG | 7 cut(s) | 451, 916, 1105, 1196, 1492, 2707, 3054 |
| BstH2I | RGCGCY | 1 cut(s) | 3229 |
| BstHHI | GCGC | 2 cut(s) | 1445, 3228 |
| BstMAI | GTCTC | 9 cut(s) | 1056, 1215, 1388, 1492, 1627, 2341, 2348, 2378, 3091 |
| BstMCI | CGRYCG | 1 cut(s) | 2036 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 2321, 2474, 2656, 2771 |
| BstNI | CCWGG | 4 cut(s) | 342, 747, 2304, 2751 |
| BstNSI | RCATGY | 6 cut(s) | 964, 1148, 1426, 1565, 2807, 3166 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 972 |
| BstSCI | CCNGG | 5 cut(s) | 340, 745, 2030, 2302, 2749 |
| BstSFI | CTRYAG | 6 cut(s) | 32, 143, 580, 2379, 2430, 2769 |
| BstSLI | GKGCMC | 1 cut(s) | 890 |
| BstV1I | GCAGC | 6 cut(s) | 208, 256, 1267, 1452, 2411, 3215 |
| BstV2I | GAAGAC | 5 cut(s) | 407, 427, 704, 2286, 3097 |
| BstX2I | RGATCY | 6 cut(s) | 259, 1173, 2549, 2950, 3132, 3274 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 746 |
| BstYI | RGATCY | 6 cut(s) | 259, 1173, 2549, 2950, 3132, 3274 |
| BstZI | CGGCCG | 1 cut(s) | 2033 |
| BsuRI | GGCC | 6 cut(s) | 610, 928, 2035, 2748, 3211, 3289 |
| BtgI | CCRYGG | 2 cut(s) | 2575, 3044 |
| BtsCI | GGATG | 7 cut(s) | 451, 916, 1105, 1196, 1492, 2707, 3054 |
| BtsI | GCAGTG | 2 cut(s) | 1926, 2003 |
| BtsIMutI | CAGTG | 6 cut(s) | 1205, 1661, 1926, 2003, 2271, 2365 |
| Cac8I | GCNNGC | 4 cut(s) | 962, 1150, 2297, 2491 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2411 |
| CciI | TCATGA | 1 cut(s) | 817 |
| CfoI | GCGC | 2 cut(s) | 1445, 3228 |
| Cfr13I | GGNCC | 7 cut(s) | 790, 926, 1234, 1349, 1602, 1924, 2747 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2247, 2282 |
| DraI | TTTAAA | 2 cut(s) | 228, 873 |
| EaeI | YGGCCR | 2 cut(s) | 2033, 3287 |
| EagI | CGGCCG | 1 cut(s) | 2033 |
| Eam1104I | CTCTTC | 2 cut(s) | 1173, 3252 |
| EarI | CTCTTC | 2 cut(s) | 1173, 3252 |
| EclXI | CGGCCG | 1 cut(s) | 2033 |
| Eco130I | CCWWGG | 4 cut(s) | 605, 1605, 2575, 3044 |
| Eco147I | AGGCCT | 1 cut(s) | 3211 |
| Eco31I | GGTCTC | 2 cut(s) | 1388, 2348 |
| Eco47I | GGWCC | 5 cut(s) | 790, 1234, 1349, 1602, 1924 |
| Eco47III | AGCGCT | 1 cut(s) | 3227 |
| Eco52I | CGGCCG | 1 cut(s) | 2033 |
| Eco57I | CTGAAG | 2 cut(s) | 1154, 2091 |
| Eco88I | CYCGRG | 1 cut(s) | 2141 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 345 |
| EcoO109I | RGGNCCY | 4 cut(s) | 790, 926, 1234, 1602 |
| EcoRI | GAATTC | 4 cut(s) | 125, 270, 2066, 2307 |
| EcoRII | CCWGG | 4 cut(s) | 340, 745, 2302, 2749 |
| EcoT14I | CCWWGG | 4 cut(s) | 605, 1605, 2575, 3044 |
| EcoT22I | ATGCAT | 2 cut(s) | 1563, 3168 |
| ErhI | CCWWGG | 4 cut(s) | 605, 1605, 2575, 3044 |
| Esp3I | CGTCTC | 1 cut(s) | 1627 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2089, 2121 |
| FaqI | GGGAC | 2 cut(s) | 1144, 1247 |
| FauI | CCCGC | 1 cut(s) | 2320 |
| FauNDI | CATATG | 2 cut(s) | 529, 2966 |
| FbaI | TGATCA | 3 cut(s) | 1342, 1641, 1990 |
| FblI | GTMKAC | 1 cut(s) | 2571 |
| Fnu4HI | GCNGC | 9 cut(s) | 197, 245, 854, 1256, 1441, 2036, 2400, 2657, 3229 |
| FokI | GGATG | 7 cut(s) | 458, 903, 1112, 1183, 1479, 2694, 3061 |
| Fsp4HI | GCNGC | 9 cut(s) | 197, 245, 854, 1256, 1441, 2036, 2400, 2657, 3229 |
| FspBI | CTAG | 8 cut(s) | 6, 384, 474, 606, 891, 965, 2810, 3014 |
| GlaI | GCGC | 2 cut(s) | 1444, 3227 |
| GluI | GCNGC | 9 cut(s) | 197, 245, 854, 1256, 1441, 2036, 2400, 2657, 3229 |
| GsuI | CTGGAG | 8 cut(s) | 973, 1529, 1685, 1802, 2388, 2695, 2772, 3323 |
| HaeII | RGCGCY | 1 cut(s) | 3229 |
| HaeIII | GGCC | 6 cut(s) | 610, 928, 2035, 2748, 3211, 3289 |
| HapII | CCGG | 2 cut(s) | 2032, 3272 |
| HhaI | GCGC | 2 cut(s) | 1445, 3228 |
| Hin6I | GCGC | 2 cut(s) | 1443, 3226 |
| HinP1I | GCGC | 2 cut(s) | 1443, 3226 |
| HincII | GTYRAC | 2 cut(s) | 1708, 3330 |
| HindII | GTYRAC | 2 cut(s) | 1708, 3330 |
| HinfI | GANTC | 8 cut(s) | 293, 506, 1574, 1972, 2188, 2408, 2689, 3233 |
| HpaII | CCGG | 2 cut(s) | 2032, 3272 |
| HphI | GGTGA | 8 cut(s) | 515, 761, 1647, 1748, 2266, 2367, 2696, 2797 |
| Hpy166II | GTNNAC | 8 cut(s) | 110, 1142, 1708, 1924, 2001, 2572, 2908, 3330 |
| Hpy8I | GTNNAC | 8 cut(s) | 110, 1142, 1708, 1924, 2001, 2572, 2908, 3330 |
| HpyCH4III | ACNGT | 8 cut(s) | 36, 405, 935, 1209, 2053, 2569, 2770, 3153 |
| HpyCH4IV | ACGT | 2 cut(s) | 1620, 3319 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 2321, 2474, 2656, 2771 |
| HpySE526I | ACGT | 2 cut(s) | 1620, 3319 |
| HspAI | GCGC | 2 cut(s) | 1443, 3226 |
| Ksp22I | TGATCA | 3 cut(s) | 1342, 1641, 1990 |
| LmnI | GCTCC | 3 cut(s) | 754, 992, 2407 |
| Lsp1109I | GCAGC | 6 cut(s) | 208, 256, 1267, 1452, 2411, 3215 |
| MaeI | CTAG | 8 cut(s) | 6, 384, 474, 606, 891, 965, 2810, 3014 |
| MaeII | ACGT | 2 cut(s) | 1620, 3319 |
| MbiI | CCGCTC | 1 cut(s) | 2656 |
| MflI | RGATCY | 6 cut(s) | 259, 1173, 2549, 2950, 3132, 3274 |
| MhlI | GDGCHC | 1 cut(s) | 890 |
| MlyI | GAGTC | 3 cut(s) | 1568, 2417, 3227 |
| MmeI | TCCRAC | 1 cut(s) | 1073 |
| Mph1103I | ATGCAT | 2 cut(s) | 1563, 3168 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2205 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1287, 2712, 3171 |
| MspA1I | CMGCKG | 3 cut(s) | 332, 993, 1702 |
| MspI | CCGG | 2 cut(s) | 2032, 3272 |
| MspR9I | CCNGG | 5 cut(s) | 342, 747, 2032, 2304, 2751 |
| Mva1269I | GAATGC | 1 cut(s) | 1036 |
| MvaI | CCWGG | 4 cut(s) | 342, 747, 2304, 2751 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 2321, 2474, 2656, 2771 |
| NciI | CCSGG | 1 cut(s) | 2032 |
| NcoI | CCATGG | 2 cut(s) | 2575, 3044 |
| NdeI | CATATG | 2 cut(s) | 529, 2966 |
| NlaIV | GGNNCC | 9 cut(s) | 673, 927, 1235, 1926, 2952, 3037, 3054, 3150, 3276 |
| NmuCI | GTSAC | 6 cut(s) | 181, 1019, 2220, 2254, 2425, 2924 |
| NsiI | ATGCAT | 2 cut(s) | 1563, 3168 |
| NspI | RCATGY | 6 cut(s) | 964, 1148, 1426, 1565, 2807, 3166 |
| NspV | TTCGAA | 1 cut(s) | 418 |
| PaeI | GCATGC | 1 cut(s) | 964 |
| PagI | TCATGA | 1 cut(s) | 817 |
| PceI | AGGCCT | 1 cut(s) | 3211 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1593 |
| PctI | GAATGC | 1 cut(s) | 1036 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2205 |
| PfeI | GAWTC | 5 cut(s) | 293, 506, 1972, 2188, 2689 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 617 |
| PkrI | GCNGC | 9 cut(s) | 198, 246, 855, 1257, 1442, 2037, 2401, 2658, 3230 |
| PleI | GAGTC | 3 cut(s) | 1568, 2416, 3227 |
| PpsI | GAGTC | 3 cut(s) | 1568, 2416, 3227 |
| Ppu21I | YACGTR | 1 cut(s) | 3320 |
| PpuMI | RGGWCCY | 3 cut(s) | 790, 1234, 1602 |
| PshAI | GACNNNNGTC | 1 cut(s) | 972 |
| Psp5II | RGGWCCY | 3 cut(s) | 790, 1234, 1602 |
| Psp6I | CCWGG | 4 cut(s) | 340, 745, 2302, 2749 |
| PspGI | CCWGG | 4 cut(s) | 340, 745, 2302, 2749 |
| PspN4I | GGNNCC | 9 cut(s) | 673, 927, 1235, 1926, 2952, 3037, 3054, 3150, 3276 |
| PspPI | GGNCC | 7 cut(s) | 790, 926, 1234, 1349, 1602, 1924, 2747 |
| PspPPI | RGGWCCY | 3 cut(s) | 790, 1234, 1602 |
| PstI | CTGCAG | 3 cut(s) | 147, 584, 2434 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2411 |
| PsuI | RGATCY | 6 cut(s) | 259, 1173, 2549, 2950, 3132, 3274 |
| PvuII | CAGCTG | 2 cut(s) | 332, 1702 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1287, 2712, 3171 |
| SatI | GCNGC | 9 cut(s) | 197, 245, 854, 1256, 1441, 2036, 2400, 2657, 3229 |
| Sau96I | GGNCC | 7 cut(s) | 790, 926, 1234, 1349, 1602, 1924, 2747 |
| ScaI | AGTACT | 1 cut(s) | 2829 |
| SchI | GAGTC | 3 cut(s) | 1568, 2417, 3227 |
| ScrFI | CCNGG | 5 cut(s) | 342, 747, 2032, 2304, 2751 |
| SduI | GDGCHC | 1 cut(s) | 890 |
| SfcI | CTRYAG | 6 cut(s) | 32, 143, 580, 2379, 2430, 2769 |
| SfuI | TTCGAA | 1 cut(s) | 418 |
| SinI | GGWCC | 5 cut(s) | 790, 1234, 1349, 1602, 1924 |
| SmiI | ATTTAAAT | 1 cut(s) | 228 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1287, 2712, 3171 |
| SmlI | CTYRAG | 2 cut(s) | 2061, 2077 |
| SmoI | CTYRAG | 2 cut(s) | 2061, 2077 |
| SpeI | ACTAGT | 2 cut(s) | 5, 3013 |
| SphI | GCATGC | 1 cut(s) | 964 |
| SseBI | AGGCCT | 1 cut(s) | 3211 |
| SspI | AATATT | 5 cut(s) | 103, 600, 2120, 2885, 2902 |
| SspMI | CTAG | 8 cut(s) | 6, 384, 474, 606, 891, 965, 2810, 3014 |
| StuI | AGGCCT | 1 cut(s) | 3211 |
| StyD4I | CCNGG | 5 cut(s) | 340, 745, 2030, 2302, 2749 |
| StyI | CCWWGG | 4 cut(s) | 605, 1605, 2575, 3044 |
| SwaI | ATTTAAAT | 1 cut(s) | 228 |
| TaaI | ACNGT | 8 cut(s) | 36, 405, 935, 1209, 2053, 2569, 2770, 3153 |
| TaiI | ACGT | 2 cut(s) | 1623, 3322 |
| TaqI | TCGA | 6 cut(s) | 206, 418, 681, 1596, 1839, 2184 |
| TatI | WGTACW | 5 cut(s) | 109, 1564, 1935, 2000, 2827 |
| TauI | GCSGC | 3 cut(s) | 856, 2038, 2659 |
| TfiI | GAWTC | 5 cut(s) | 293, 506, 1972, 2188, 2689 |
| TscAI | CASTG | 6 cut(s) | 1212, 1668, 1926, 2003, 2271, 2365 |
| TseFI | GTSAC | 6 cut(s) | 181, 1019, 2220, 2254, 2425, 2924 |
| TseI | GCWGC | 6 cut(s) | 196, 244, 1255, 1440, 2399, 3228 |
| Tsp45I | GTSAC | 6 cut(s) | 181, 1019, 2220, 2254, 2425, 2924 |
| TspGWI | ACGGA | 2 cut(s) | 149, 664 |
| TspRI | CASTG | 6 cut(s) | 1212, 1668, 1926, 2003, 2271, 2365 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 617 |
| VpaK11BI | GGWCC | 5 cut(s) | 790, 1234, 1349, 1602, 1924 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 345 |
| XbaI | TCTAGA | 1 cut(s) | 473 |
| XceI | RCATGY | 6 cut(s) | 964, 1148, 1426, 1565, 2807, 3166 |
| XmaJI | CCTAGG | 1 cut(s) | 605 |
| XmiI | GTMKAC | 1 cut(s) | 2571 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2205 |
| XspI | CTAG | 8 cut(s) | 6, 384, 474, 606, 891, 965, 2810, 3014 |
| ZrmI | AGTACT | 1 cut(s) | 2829 |
| Zsp2I | ATGCAT | 2 cut(s) | 1563, 3168 |