PB1 domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04700 AT1G04700 AT1G04700 |
| fragaria_vesca | FvH4_4g05890 |
| malus_domestica | MD13G1231300.v1.1 MD16G1235800.v1.1 |
| prunus_persica | Prupe.1G061200_v2.0.a1 |
| pyrus_communis | pycom13g20420 |
| rosa_chinensis | RchiOBHm_Chr4g0396991 |
| rosa_laevigata | RLG00000009461 |
| rosa_multiflora | Rmu_sc0002963.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00341980 |
| rosa_rugosa | Rorug03G0346000 |
| rosa_samantha | Rh4AG075900 Rh4BG072300 Rh4CG080600 Rh4DG069700 |
| rosa_wichuraiana | Rw4G006090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1511 |
| Acc65I | GGTACC | 1 cut(s) | 2770 |
| AccB1I | GGYRCC | 2 cut(s) | 2770, 3085 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 608 |
| AccBSI | CCGCTC | 1 cut(s) | 2689 |
| AccI | GTMKAC | 1 cut(s) | 2604 |
| AcoI | YGGCCR | 1 cut(s) | 3320 |
| AcuI | CTGAAG | 4 cut(s) | 846, 1136, 1337, 2124 |
| AfeI | AGCGCT | 1 cut(s) | 3260 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 608, 1798, 3078 |
| AhlI | ACTAGT | 3 cut(s) | 5, 1007, 3046 |
| AjnI | CCWGG | 4 cut(s) | 736, 1797, 2335, 2782 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 677, 709 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2444 |
| Ama87I | CYCGRG | 1 cut(s) | 2174 |
| Aor51HI | AGCGCT | 1 cut(s) | 3260 |
| AoxI | GGCC | 7 cut(s) | 599, 917, 1216, 2066, 2780, 3242, 3320 |
| ApaI | GGGCCC | 1 cut(s) | 1220 |
| ApeKI | GCWGC | 4 cut(s) | 196, 1237, 2432, 3261 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2888, 2920 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1868 |
| Asp718I | GGTACC | 1 cut(s) | 2770 |
| AspA2I | CCTAGG | 1 cut(s) | 596 |
| AspLEI | GCGC | 2 cut(s) | 1412, 3261 |
| AspS9I | GGNCC | 8 cut(s) | 781, 917, 1216, 1217, 1629, 1957, 2067, 2780 |
| AsuC2I | CCSGG | 1 cut(s) | 2065 |
| AsuHPI | GGTGA | 9 cut(s) | 506, 752, 1674, 1781, 2299, 2400, 2729, 2830, 3294 |
| AsuII | TTCGAA | 1 cut(s) | 409 |
| AvaI | CYCGRG | 1 cut(s) | 2174 |
| AvaII | GGWCC | 3 cut(s) | 781, 1629, 1957 |
| AvrII | CCTAGG | 1 cut(s) | 596 |
| BaeGI | GKGCMC | 1 cut(s) | 1220 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3033, 3066 |
| BamHI | GGATCC | 3 cut(s) | 2221, 2983, 3307 |
| BanI | GGYRCC | 2 cut(s) | 2770, 3085 |
| BanII | GRGCYC | 2 cut(s) | 881, 1220 |
| BauI | CACGAG | 1 cut(s) | 1613 |
| BbsI | GAAGAC | 4 cut(s) | 398, 418, 695, 2319 |
| BbvI | GCAGC | 4 cut(s) | 208, 1249, 2444, 3248 |
| BceAI | ACGGC | 1 cut(s) | 3099 |
| BciT130I | CCWGG | 4 cut(s) | 738, 1799, 2337, 2784 |
| BciVI | GTATCC | 1 cut(s) | 628 |
| BclI | TGATCA | 3 cut(s) | 1324, 1668, 2023 |
| BcnI | CCSGG | 1 cut(s) | 2065 |
| BcuI | ACTAGT | 3 cut(s) | 5, 1007, 3046 |
| BfaI | CTAG | 8 cut(s) | 6, 375, 465, 597, 882, 956, 1008, 3047 |
| BfmI | CTRYAG | 5 cut(s) | 143, 571, 2412, 2463, 2802 |
| BfoI | RGCGCY | 1 cut(s) | 3262 |
| BfuI | GTATCC | 1 cut(s) | 628 |
| BglII | AGATCT | 1 cut(s) | 3165 |
| BisI | GCNGC | 7 cut(s) | 197, 845, 1238, 2433, 2690, 3262, 3366 |
| BlnI | CCTAGG | 1 cut(s) | 596 |
| BlpI | GCTNAGC | 1 cut(s) | 1725 |
| BlsI | GCNGC | 7 cut(s) | 198, 846, 1239, 2434, 2691, 3263, 3367 |
| BmcAI | AGTACT | 1 cut(s) | 2862 |
| Bme1390I | CCNGG | 5 cut(s) | 738, 1799, 2065, 2337, 2784 |
| Bme18I | GGWCC | 3 cut(s) | 781, 1629, 1957 |
| BmeT110I | CYCGRG | 1 cut(s) | 2174 |
| BmgT120I | GGNCC | 8 cut(s) | 781, 917, 1216, 1217, 1629, 1957, 2067, 2780 |
| BmrFI | CCNGG | 5 cut(s) | 738, 1799, 2065, 2337, 2784 |
| BmrI | ACTGGG | 3 cut(s) | 170, 1432, 3183 |
| BmuI | ACTGGG | 3 cut(s) | 170, 1432, 3183 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1086 |
| BpiI | GAAGAC | 4 cut(s) | 398, 418, 695, 2319 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 113, 145 |
| BpmI | CTGGAG | 7 cut(s) | 964, 1712, 1835, 2421, 2728, 2805, 3356 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1725 |
| Bpu14I | TTCGAA | 1 cut(s) | 409 |
| BpuEI | CTTGAG | 2 cut(s) | 2079, 2095 |
| BpuMI | CCSGG | 1 cut(s) | 2065 |
| BsaAI | YACGTR | 2 cut(s) | 1591, 3353 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2169 |
| BsaI | GGTCTC | 2 cut(s) | 1370, 2381 |
| BsaJI | CCNNGG | 6 cut(s) | 596, 968, 1632, 2071, 2608, 3077 |
| BsaWI | WCCGGW | 1 cut(s) | 3304 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1632, 1662, 1866, 1896 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 608, 1798, 3078 |
| Bse3DI | GCAATG | 2 cut(s) | 1278, 1792 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2169 |
| BseBI | CCWGG | 4 cut(s) | 738, 1799, 2337, 2784 |
| BseDI | CCNNGG | 6 cut(s) | 596, 968, 1632, 2071, 2608, 3077 |
| BseGI | GGATG | 5 cut(s) | 907, 1178, 1519, 2740, 3087 |
| BseJI | GATNNNNATC | 1 cut(s) | 2169 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 608, 1798, 3078 |
| BseMI | GCAATG | 2 cut(s) | 1278, 1792 |
| BseMII | CTCAG | 9 cut(s) | 518, 631, 1041, 1365, 1665, 1739, 2003, 2436, 3114 |
| BseRI | GAGGAG | 2 cut(s) | 758, 1653 |
| BseSI | GKGCMC | 1 cut(s) | 1220 |
| BseXI | GCAGC | 4 cut(s) | 208, 1249, 2444, 3248 |
| BsgI | GTGCAG | 3 cut(s) | 102, 1256, 2451 |
| BshFI | GGCC | 7 cut(s) | 601, 919, 1218, 2068, 2782, 3244, 3322 |
| BshNI | GGYRCC | 2 cut(s) | 2770, 3085 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2174 |
| BsiSI | CCGG | 2 cut(s) | 2065, 3305 |
| BslFI | GGGAC | 1 cut(s) | 1126 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 608, 1798, 3078 |
| BsmBI | CGTCTC | 1 cut(s) | 1038 |
| BsmFI | GGGAC | 1 cut(s) | 1126 |
| BsmI | GAATGC | 1 cut(s) | 1027 |
| BsnI | GGCC | 7 cut(s) | 601, 919, 1218, 2068, 2782, 3244, 3322 |
| Bso31I | GGTCTC | 2 cut(s) | 1370, 2381 |
| BsoBI | CYCGRG | 1 cut(s) | 2174 |
| Bsp119I | TTCGAA | 1 cut(s) | 409 |
| Bsp120I | GGGCCC | 1 cut(s) | 1216 |
| Bsp1286I | GDGCHC | 2 cut(s) | 881, 1220 |
| Bsp1407I | TGTACA | 1 cut(s) | 109 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1725 |
| Bsp19I | CCATGG | 3 cut(s) | 2071, 2608, 3077 |
| BspANI | GGCC | 7 cut(s) | 601, 919, 1218, 2068, 2782, 3244, 3322 |
| BspCNI | CTCAG | 9 cut(s) | 517, 630, 1040, 1366, 1664, 1738, 2002, 2437, 3115 |
| BspHI | TCATGA | 1 cut(s) | 808 |
| BspMAI | CTGCAG | 3 cut(s) | 147, 575, 2467 |
| BspT104I | TTCGAA | 1 cut(s) | 409 |
| BspT107I | GGYRCC | 2 cut(s) | 2770, 3085 |
| BspTNI | GGTCTC | 2 cut(s) | 1370, 2381 |
| BsrBI | CCGCTC | 1 cut(s) | 2689 |
| BsrDI | GCAATG | 2 cut(s) | 1278, 1792 |
| BsrGI | TGTACA | 1 cut(s) | 109 |
| BssECI | CCNNGG | 6 cut(s) | 596, 968, 1632, 2071, 2608, 3077 |
| BssSI | CACGAG | 1 cut(s) | 1613 |
| BssT1I | CCWWGG | 5 cut(s) | 596, 1632, 2071, 2608, 3077 |
| Bst2BI | CACGAG | 1 cut(s) | 1613 |
| Bst2UI | CCWGG | 4 cut(s) | 738, 1799, 2337, 2784 |
| Bst4CI | ACNGT | 6 cut(s) | 36, 396, 1753, 2086, 2602, 2803 |
| Bst6I | CTCTTC | 2 cut(s) | 1155, 3285 |
| BstAUI | TGTACA | 1 cut(s) | 109 |
| BstBAI | YACGTR | 2 cut(s) | 1591, 3353 |
| BstBI | TTCGAA | 1 cut(s) | 409 |
| BstC8I | GCNNGC | 3 cut(s) | 953, 1132, 2524 |
| BstDSI | CCRYGG | 3 cut(s) | 2071, 2608, 3077 |
| BstEII | GGTNACC | 1 cut(s) | 3300 |
| BstF5I | GGATG | 5 cut(s) | 907, 1178, 1519, 2740, 3087 |
| BstH2I | RGCGCY | 1 cut(s) | 3262 |
| BstHHI | GCGC | 2 cut(s) | 1412, 3261 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 2354, 2507, 2689, 2804 |
| BstNI | CCWGG | 4 cut(s) | 738, 1799, 2337, 2784 |
| BstNSI | RCATGY | 5 cut(s) | 955, 1130, 1477, 2840, 3199 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1086 |
| BstPI | GGTNACC | 1 cut(s) | 3300 |
| BstSCI | CCNGG | 5 cut(s) | 736, 1797, 2063, 2335, 2782 |
| BstSFI | CTRYAG | 5 cut(s) | 143, 571, 2412, 2463, 2802 |
| BstSLI | GKGCMC | 1 cut(s) | 1220 |
| BstV1I | GCAGC | 4 cut(s) | 208, 1249, 2444, 3248 |
| BstV2I | GAAGAC | 4 cut(s) | 398, 418, 695, 2319 |
| BstX2I | RGATCY | 6 cut(s) | 259, 1155, 2221, 2983, 3165, 3307 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 737 |
| BstYI | RGATCY | 6 cut(s) | 259, 1155, 2221, 2983, 3165, 3307 |
| BsuI | GTATCC | 1 cut(s) | 628 |
| BsuRI | GGCC | 7 cut(s) | 601, 919, 1218, 2068, 2782, 3244, 3322 |
| BtgI | CCRYGG | 3 cut(s) | 2071, 2608, 3077 |
| BtsCI | GGATG | 5 cut(s) | 907, 1178, 1519, 2740, 3087 |
| BtsI | GCAGTG | 2 cut(s) | 1959, 2036 |
| BtsIMutI | CAGTG | 6 cut(s) | 1659, 1688, 1959, 2036, 2304, 2398 |
| Cac8I | GCNNGC | 3 cut(s) | 953, 1132, 2524 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2444 |
| CciI | TCATGA | 1 cut(s) | 808 |
| CfoI | GCGC | 2 cut(s) | 1412, 3261 |
| Cfr13I | GGNCC | 8 cut(s) | 781, 917, 1216, 1217, 1629, 1957, 2067, 2780 |
| CseI | GACGC | 1 cut(s) | 1055 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2280, 2315 |
| DraI | TTTAAA | 2 cut(s) | 228, 864 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1511 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1511 |
| EaeI | YGGCCR | 1 cut(s) | 3320 |
| Eam1104I | CTCTTC | 2 cut(s) | 1155, 3285 |
| EarI | CTCTTC | 2 cut(s) | 1155, 3285 |
| Eco130I | CCWWGG | 5 cut(s) | 596, 1632, 2071, 2608, 3077 |
| Eco147I | AGGCCT | 1 cut(s) | 3244 |
| Eco24I | GRGCYC | 2 cut(s) | 881, 1220 |
| Eco31I | GGTCTC | 2 cut(s) | 1370, 2381 |
| Eco47I | GGWCC | 3 cut(s) | 781, 1629, 1957 |
| Eco47III | AGCGCT | 1 cut(s) | 3260 |
| Eco57I | CTGAAG | 4 cut(s) | 846, 1136, 1337, 2124 |
| Eco88I | CYCGRG | 1 cut(s) | 2174 |
| Eco91I | GGTNACC | 1 cut(s) | 3300 |
| EcoO109I | RGGNCCY | 5 cut(s) | 781, 917, 1216, 1217, 1629 |
| EcoO65I | GGTNACC | 1 cut(s) | 3300 |
| EcoRI | GAATTC | 3 cut(s) | 125, 2099, 2340 |
| EcoRII | CCWGG | 4 cut(s) | 736, 1797, 2335, 2782 |
| EcoT14I | CCWWGG | 5 cut(s) | 596, 1632, 2071, 2608, 3077 |
| EcoT22I | ATGCAT | 1 cut(s) | 3201 |
| EcoT38I | GRGCYC | 2 cut(s) | 881, 1220 |
| ErhI | CCWWGG | 5 cut(s) | 596, 1632, 2071, 2608, 3077 |
| Esp3I | CGTCTC | 1 cut(s) | 1038 |
| FaqI | GGGAC | 1 cut(s) | 1126 |
| FauI | CCCGC | 1 cut(s) | 2353 |
| FauNDI | CATATG | 3 cut(s) | 520, 2999, 3187 |
| FbaI | TGATCA | 3 cut(s) | 1324, 1668, 2023 |
| FblI | GTMKAC | 1 cut(s) | 2604 |
| Fnu4HI | GCNGC | 7 cut(s) | 197, 845, 1238, 2433, 2690, 3262, 3366 |
| FokI | GGATG | 5 cut(s) | 894, 1165, 1506, 2727, 3094 |
| FriOI | GRGCYC | 2 cut(s) | 881, 1220 |
| Fsp4HI | GCNGC | 7 cut(s) | 197, 845, 1238, 2433, 2690, 3262, 3366 |
| FspBI | CTAG | 8 cut(s) | 6, 375, 465, 597, 882, 956, 1008, 3047 |
| GlaI | GCGC | 2 cut(s) | 1411, 3260 |
| GluI | GCNGC | 7 cut(s) | 197, 845, 1238, 2433, 2690, 3262, 3366 |
| GsuI | CTGGAG | 7 cut(s) | 964, 1712, 1835, 2421, 2728, 2805, 3356 |
| HaeII | RGCGCY | 1 cut(s) | 3262 |
| HaeIII | GGCC | 7 cut(s) | 601, 919, 1218, 2068, 2782, 3244, 3322 |
| HapII | CCGG | 2 cut(s) | 2065, 3305 |
| HgaI | GACGC | 1 cut(s) | 1055 |
| HhaI | GCGC | 2 cut(s) | 1412, 3261 |
| Hin6I | GCGC | 2 cut(s) | 1410, 3259 |
| HinP1I | GCGC | 2 cut(s) | 1410, 3259 |
| HincII | GTYRAC | 1 cut(s) | 1735 |
| HindII | GTYRAC | 1 cut(s) | 1735 |
| HinfI | GANTC | 7 cut(s) | 293, 497, 1601, 2005, 2441, 2722, 3266 |
| HpaII | CCGG | 2 cut(s) | 2065, 3305 |
| HphI | GGTGA | 9 cut(s) | 506, 752, 1674, 1781, 2299, 2400, 2729, 2830, 3294 |
| Hpy166II | GTNNAC | 7 cut(s) | 110, 1124, 1735, 1957, 2034, 2605, 2941 |
| Hpy8I | GTNNAC | 7 cut(s) | 110, 1124, 1735, 1957, 2034, 2605, 2941 |
| HpyCH4III | ACNGT | 6 cut(s) | 36, 396, 1753, 2086, 2602, 2803 |
| HpyCH4IV | ACGT | 3 cut(s) | 1083, 1590, 3352 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 2354, 2507, 2689, 2804 |
| HpySE526I | ACGT | 3 cut(s) | 1083, 1590, 3352 |
| HspAI | GCGC | 2 cut(s) | 1410, 3259 |
| KpnI | GGTACC | 1 cut(s) | 2774 |
| Ksp22I | TGATCA | 3 cut(s) | 1324, 1668, 2023 |
| LmnI | GCTCC | 3 cut(s) | 745, 983, 2440 |
| Lsp1109I | GCAGC | 4 cut(s) | 208, 1249, 2444, 3248 |
| MaeI | CTAG | 8 cut(s) | 6, 375, 465, 597, 882, 956, 1008, 3047 |
| MaeII | ACGT | 3 cut(s) | 1083, 1590, 3352 |
| MbiI | CCGCTC | 1 cut(s) | 2689 |
| MflI | RGATCY | 6 cut(s) | 259, 1155, 2221, 2983, 3165, 3307 |
| MhlI | GDGCHC | 2 cut(s) | 881, 1220 |
| MlyI | GAGTC | 3 cut(s) | 1595, 2450, 3260 |
| Mph1103I | ATGCAT | 1 cut(s) | 3201 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1868 |
| MslI | CAYNNNNRTG | 4 cut(s) | 492, 1269, 2745, 3204 |
| MspA1I | CMGCKG | 4 cut(s) | 332, 984, 1729, 3365 |
| MspI | CCGG | 2 cut(s) | 2065, 3305 |
| MspR9I | CCNGG | 5 cut(s) | 738, 1799, 2065, 2337, 2784 |
| Mva1269I | GAATGC | 1 cut(s) | 1027 |
| MvaI | CCWGG | 4 cut(s) | 738, 1799, 2337, 2784 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 2354, 2507, 2689, 2804 |
| NciI | CCSGG | 1 cut(s) | 2065 |
| NcoI | CCATGG | 3 cut(s) | 2071, 2608, 3077 |
| NdeI | CATATG | 3 cut(s) | 520, 2999, 3187 |
| NmuCI | GTSAC | 7 cut(s) | 181, 901, 1010, 2253, 2287, 2957, 3300 |
| NsiI | ATGCAT | 1 cut(s) | 3201 |
| NspI | RCATGY | 5 cut(s) | 955, 1130, 1477, 2840, 3199 |
| NspV | TTCGAA | 1 cut(s) | 409 |
| PaeI | GCATGC | 1 cut(s) | 955 |
| PagI | TCATGA | 1 cut(s) | 808 |
| PceI | AGGCCT | 1 cut(s) | 3244 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1620 |
| PctI | GAATGC | 1 cut(s) | 1027 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1868 |
| PfeI | GAWTC | 4 cut(s) | 293, 497, 2005, 2722 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 608 |
| PkrI | GCNGC | 7 cut(s) | 198, 846, 1239, 2434, 2691, 3263, 3367 |
| PleI | GAGTC | 3 cut(s) | 1595, 2449, 3260 |
| PpsI | GAGTC | 3 cut(s) | 1595, 2449, 3260 |
| Ppu21I | YACGTR | 2 cut(s) | 1591, 3353 |
| PpuMI | RGGWCCY | 2 cut(s) | 781, 1629 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1086 |
| Psp5II | RGGWCCY | 2 cut(s) | 781, 1629 |
| Psp6I | CCWGG | 4 cut(s) | 736, 1797, 2335, 2782 |
| PspEI | GGTNACC | 1 cut(s) | 3300 |
| PspGI | CCWGG | 4 cut(s) | 736, 1797, 2335, 2782 |
| PspOMI | GGGCCC | 1 cut(s) | 1216 |
| PspPI | GGNCC | 8 cut(s) | 781, 917, 1216, 1217, 1629, 1957, 2067, 2780 |
| PspPPI | RGGWCCY | 2 cut(s) | 781, 1629 |
| PstI | CTGCAG | 3 cut(s) | 147, 575, 2467 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2444 |
| PsuI | RGATCY | 6 cut(s) | 259, 1155, 2221, 2983, 3165, 3307 |
| PvuII | CAGCTG | 2 cut(s) | 332, 1729 |
| RseI | CAYNNNNRTG | 4 cut(s) | 492, 1269, 2745, 3204 |
| SatI | GCNGC | 7 cut(s) | 197, 845, 1238, 2433, 2690, 3262, 3366 |
| Sau96I | GGNCC | 8 cut(s) | 781, 917, 1216, 1217, 1629, 1957, 2067, 2780 |
| ScaI | AGTACT | 1 cut(s) | 2862 |
| SchI | GAGTC | 3 cut(s) | 1595, 2450, 3260 |
| ScrFI | CCNGG | 5 cut(s) | 738, 1799, 2065, 2337, 2784 |
| SduI | GDGCHC | 2 cut(s) | 881, 1220 |
| SfcI | CTRYAG | 5 cut(s) | 143, 571, 2412, 2463, 2802 |
| SfuI | TTCGAA | 1 cut(s) | 409 |
| SinI | GGWCC | 3 cut(s) | 781, 1629, 1957 |
| SmiI | ATTTAAAT | 1 cut(s) | 228 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 492, 1269, 2745, 3204 |
| SmlI | CTYRAG | 2 cut(s) | 2094, 2110 |
| SmoI | CTYRAG | 2 cut(s) | 2094, 2110 |
| SpeI | ACTAGT | 3 cut(s) | 5, 1007, 3046 |
| SphI | GCATGC | 1 cut(s) | 955 |
| SseBI | AGGCCT | 1 cut(s) | 3244 |
| SspI | AATATT | 5 cut(s) | 103, 591, 2153, 2918, 2935 |
| SspMI | CTAG | 8 cut(s) | 6, 375, 465, 597, 882, 956, 1008, 3047 |
| StuI | AGGCCT | 1 cut(s) | 3244 |
| StyD4I | CCNGG | 5 cut(s) | 736, 1797, 2063, 2335, 2782 |
| StyI | CCWWGG | 5 cut(s) | 596, 1632, 2071, 2608, 3077 |
| SwaI | ATTTAAAT | 1 cut(s) | 228 |
| TaaI | ACNGT | 6 cut(s) | 36, 396, 1753, 2086, 2602, 2803 |
| TaiI | ACGT | 3 cut(s) | 1086, 1593, 3355 |
| TaqI | TCGA | 3 cut(s) | 206, 409, 1623 |
| TatI | WGTACW | 4 cut(s) | 109, 1968, 2033, 2860 |
| TauI | GCSGC | 3 cut(s) | 847, 2692, 3368 |
| TfiI | GAWTC | 4 cut(s) | 293, 497, 2005, 2722 |
| TscAI | CASTG | 6 cut(s) | 1659, 1695, 1959, 2036, 2304, 2398 |
| TseFI | GTSAC | 7 cut(s) | 181, 901, 1010, 2253, 2287, 2957, 3300 |
| TseI | GCWGC | 4 cut(s) | 196, 1237, 2432, 3261 |
| Tsp45I | GTSAC | 7 cut(s) | 181, 901, 1010, 2253, 2287, 2957, 3300 |
| TspDTI | ATGAA | 9 cut(s) | 476, 575, 698, 882, 1358, 1472, 2394, 2412, 2499 |
| TspGWI | ACGGA | 1 cut(s) | 149 |
| TspRI | CASTG | 6 cut(s) | 1659, 1695, 1959, 2036, 2304, 2398 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 608 |
| VpaK11BI | GGWCC | 3 cut(s) | 781, 1629, 1957 |
| XceI | RCATGY | 5 cut(s) | 955, 1130, 1477, 2840, 3199 |
| XmaJI | CCTAGG | 1 cut(s) | 596 |
| XmiI | GTMKAC | 1 cut(s) | 2604 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1868 |
| XspI | CTAG | 8 cut(s) | 6, 375, 465, 597, 882, 956, 1008, 3047 |
| ZrmI | AGTACT | 1 cut(s) | 2862 |
| Zsp2I | ATGCAT | 1 cut(s) | 3201 |