Rh4DG069700

PB1 domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
10322825 .. 10328858
6034 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG069700.1

Sequence Viewer

Length: 3405 bp
ATGACTAGTGAGATTCGTGGTACTTCTGGACAACAGTTCCGCAAAGATGCAACAACTCATGTGCCAAGTGACAGAAGTGGTGCAGATAGAGATGTAGATAATATTTGTGTACAGACGGGCGAGGAATTCTCAACGGAGTTTCTGCAGGATCGTATAGCACAAAGAAGATTAGCCCCAGTAGTGACTGGTGTTGAGCAGCACCAGTCGAAAAGAGTGGGATTTAATTTAAATCAAAACAATCCGCAGCTCGTTAATGAGGATCTAAATGGAATTCTTGGACTAAGGAGATTAGATTCTGATGGAAGTTCAGAATTTTCAGATTTTGTTACAGCTGGTACAGGTTATGTGCCTGATTTAGAGAAGAATGTTTTTCCTAGTAGTAATGTCAGCAGACAGTATGGTGGTCTTCGAAGACAACTATCAGGTAAGTTTGCGGAAGAAGTTAATCGTGATTGGGTTATTCCTAGATCAAATACTCCACCTTTTTATGTTGGTGAATCCCCTCAGTCATATAGTCCATATGGTCAAGGATTTTTTGAAGGCTCTTTCTCTTTCAAAATGAAGTTTCTCTGCAGTTTTGGGGGGAGAATATTACCTAGGCCAAATGATGGGAAGCTCAGATATGTTGGTGGAGATACTCGGATTTTATCTATTCACAAAAGCACCAATTTGGAGGAACTAATGAAGAAGACATTGGCAATTTGTAACCACCCCCATACTATCAAGTACCAACTTCCTGGTGAGGAGCTTGATGCACTTGTATCTGTTTGTTCTGATGAGGACCTCCATCACATGATAGAGGAATATCATGATCTGGAAAGAACTGAAGGTTCTCAAAGATTGCGGCTCTTTCTTGTACCTTTAAATGAACCAGAGAGCCCTAGTTCTATTGAAGGCAGGGTCACACATCCAATGGGGCCTGACAGCCAATATGTCTTTGCTGTTAATGGCATGCTAGACAGAAGCCCTCGGAAAAGCTCCAGCGGTCAGAGTTTGACAAGTCAGACTAGTCACTTTGGGAATGCCTCAGATTATAGTCATAGAGACGCTTCCACATCTGCATTTACTTTAGAGAACAAGGACGTTAGTCTAAGTTCCTCAAATCTGTCGGGGACAAGTAGTAAACATGCTCGCCAGTTCTTAGGTACTCTTCAGATCCCACAGAAGTCTTTTATTCCATCCCCTCCTCTATCTCCTGTTCAACTTCAACACAGGGACCCCAAAAATTGTAATGTGCAGCTACATTTGGATCAACCATATTGTCATGGTAATGGAGGCATTGCTCTCTCTGATGTTGATGCTGTGGGCTATATCAATAATCTTGATCATGGTCCTCCATTGATGAATTACCTTCAGCACAACAAAAATTTGGCTGAGACCTACCTGACTAAAAAACCCCTCAATCGTAGCGCAAGTGAAGATTTTGTGCCTTCTGCCCAGTATGGTCAAGGTGGCATGAACTTTGAGAGACACATGCCTCTTAGAAAGCCCTTGATCCATTCTGACAAGTCTGTCTCTCATCCTAAAGATATACTGGATTTATTGTTACCGACTGGTAATATAGATGCCTCCCATCAAAAAATAATGCATGTACTTTCTGACTCTTGGTTGCACGAGCATCTCGAAATGTCCTTCGAAGGAGAAAATGTCTCAGTGCCATTGAATTTGATCAGAGAAGGATCACCTTCACTGGAGATGCCAAGTTCCTCGCAAGAACGAGAGGCTCAGCTGGTTGACCAGAAAAACAAAATGGTTACACATAGTAATCAATTTAATATCAGCACACCTCACCATTGCAAGGAGGAAGAAGGTCTGGAGGTGTTCAACCATTACACGAATGACACTTCTGCTGATAAAAAATGGAAGCACTTTGAAGGAAATGTTGAAGTTACTTCAAATGATGCTGTCATGGAATTTAAGAACTTACTAAATATGAACTACCTTAAAGATGCAGTGGACCCCCAAGAGTACAAATTAGACACAACTTCTCAGTATTCTCATAGGATTCAAAATGGTACAAATGATCAGCAGTGTACTACAACAATTAGTGGTCAATCAATTTCCCGGCCCCATGGATTACTAACCGTTGCATCTCAAGAATTCTTAATCTCAAGCCCTCAAATGCCTACAAGTTCTGCTTCAGATAGAGAATATTCTCTGCATGATAATTATCCCGAGTATGTGGTTGAAAAGGTGGGTTCTGGCAGACACTCTTTCGAGAATCTGAAATGTGAAGATGTTCGCCCTGTCCAGTCACAGCCCTTAGATAATCATAATGACAATAAGGTGACAAAATCAGTGGTTATTGTTGAAGACTTAACTAATAGCACACCACCTGGAATTCCCGCTTCTAAAGCGGTCTATCGTGTCTCCCATATAGAAGATGAGACCAGTGATGAATGTTCATCACCTACAGAGACAGAGATAAGTGCAGCTCCAGAGTCTGAGAGAAAGGGTGTGACTGCAGATGGCAAAGATAGGCATGAAACTATTAGTGATGCTGCAATAGCCGAAATGGAAGCAGGCATCTATGGTTTGCAGATCATAAAAAATGCTGATCTTGAAGAACTGCAAGAGTTGGGATCTGGTACATTTGGAACTGTCTACCATGGGAAGTGGAGAGGAACAGATGTTGCTATTAAGAGAATAAAAAAGAGTTGTTTTTCTGACAGATCATCAGAGCAAGAGCGGCTGACTAAGGACTTCTGGAGAGAGGCAAAGATTCTTTCCACCCTTCACCATCCAAATGTAGTAGCACTTTATGGAGTAGTACCTGATGGCCCTGGAGGAACATTGGCAACTGTAGCTGAATTTATGGTGAATGGATCATTGAGGCATGTCCTAGTTAGGAAGGACAGAGTACTTGACCGCCGAAAGAGGCTCATAATCTTGATGGACACAGCTTTTGGCATGGAATATTTGCATTTGAAAAATATTGTTCACTTTGATTTGAAGTGTGACAATTTGCTTGTCAATTTGAGGGATCCTGAAAGACCCGTATGTAAGGTTGCTGATTTTGGGCTGTCAAGAATTAAACGCAACACACTAGTATCTGGTGGTGTGCGAGGAACCCTTCCATGGATGGCACCAGAATTATTAAATGGTAGCAGTAGCCGTGTCTCTGAGAAGGTTGATGTGTTCTCATTTGGTATTGTAATGTGGGAGATCTTGACTGGGGAGGAACCGTATGCGAACATGCATTGTGGTGCTATCATAGGGGGAATTGTAAATAATACACTAAGGCCTCCTATTCCAAAGCGCTGCGACTCGGAGTGGAAAAAGTTAATGGAAGAGTGCTGGTCACCGGATCCTGCTGATCGGCCATCATTCACAGATATAACACATAGGCTACGTGATATGTCAACGGCACTCCAGAAGAAGCGGTCTAATGTTGCAAGTAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1134

Amino Acids

126.75

Weight (kDa)

5.95

Isoelectric Point (pI)

50.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PB1 PF00564 202 - 287 2.4e-20 PB1 domain
Pkinase PF00069 855 - 1115 5.6e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 856 - 1117 2.2e-63 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012803)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04700 AT1G04700 AT1G04700
fragaria_vesca FvH4_4g05890
malus_domestica MD13G1231300.v1.1 MD16G1235800.v1.1
prunus_persica Prupe.1G061200_v2.0.a1
pyrus_communis pycom13g20420
rosa_chinensis RchiOBHm_Chr4g0396991
rosa_laevigata RLG00000009461
rosa_multiflora Rmu_sc0002963.1_g000016
rosa_roxburghii Rroxscaffold_5G00341980
rosa_rugosa Rorug03G0346000
rosa_samantha Rh4AG075900 Rh4BG072300 Rh4CG080600 Rh4DG069700
rosa_wichuraiana Rw4G006090

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1511
AccB1I GGYRCC 1 cut(s) 3085
AccB7I CCANNNNNTGG 1 cut(s) 608
AccBSI CCGCTC 1 cut(s) 2689
AccI GTMKAC 1 cut(s) 2604
AcoI YGGCCR 1 cut(s) 3320
AcsI RAATTY 9 cut(s) 125, 270, 311, 1366, 1663, 1913, 2099, 2340, 2810
AcuI CTGAAG 4 cut(s) 846, 1136, 1337, 2124
AfeI AGCGCT 1 cut(s) 3260
AfiI CCNNNNNNNGG 3 cut(s) 608, 1798, 3078
AhlI ACTAGT 3 cut(s) 5, 1007, 3046
AjnI CCWGG 3 cut(s) 736, 2335, 2782
AjuI GAANNNNNNNTTGG 2 cut(s) 677, 709
Alw26I GTCTC 9 cut(s) 1038, 1370, 1462, 1519, 1654, 2374, 2381, 2411, 3124
AlwNI CAGNNNCTG 1 cut(s) 2444
Ama87I CYCGRG 1 cut(s) 2174
Aor51HI AGCGCT 1 cut(s) 3260
AoxI GGCC 6 cut(s) 599, 917, 2066, 2779, 3242, 3320
ApeKI GCWGC 6 cut(s) 196, 244, 1237, 2432, 2501, 3261
ApoI RAATTY 9 cut(s) 125, 270, 311, 1366, 1663, 1913, 2099, 2340, 2810
ArsI GACNNNNNNTTYG 2 cut(s) 2888, 2920
Asp700I GAANNNNTTC 1 cut(s) 2238
AspA2I CCTAGG 1 cut(s) 596
AspLEI GCGC 2 cut(s) 1412, 3261
AspS9I GGNCC 7 cut(s) 781, 917, 1216, 1331, 1957, 2067, 2780
AsuC2I CCSGG 1 cut(s) 2065
AsuHPI GGTGA 9 cut(s) 506, 752, 1674, 1781, 2299, 2400, 2729, 2830, 3294
AsuII TTCGAA 2 cut(s) 409, 1635
AvaI CYCGRG 1 cut(s) 2174
AvaII GGWCC 4 cut(s) 781, 1216, 1331, 1957
AvrII CCTAGG 1 cut(s) 596
BaeI ACNNNNGTAYC 2 cut(s) 3033, 3066
BamHI GGATCC 2 cut(s) 2983, 3307
BanI GGYRCC 1 cut(s) 3085
BanII GRGCYC 1 cut(s) 881
BauI CACGAG 1 cut(s) 1613
BbsI GAAGAC 4 cut(s) 398, 418, 695, 2319
BbvI GCAGC 6 cut(s) 208, 256, 1249, 2444, 2488, 3248
BceAI ACGGC 2 cut(s) 3099, 3381
BciT130I CCWGG 3 cut(s) 738, 2337, 2784
BclI TGATCA 3 cut(s) 1324, 1668, 2023
BcnI CCSGG 1 cut(s) 2065
BcoDI GTCTC 9 cut(s) 1038, 1370, 1462, 1519, 1654, 2374, 2381, 2411, 3124
BcuI ACTAGT 3 cut(s) 5, 1007, 3046
BfaI CTAG 9 cut(s) 6, 375, 465, 597, 882, 956, 1008, 2843, 3047
BfmI CTRYAG 5 cut(s) 143, 571, 2412, 2463, 2802
BfoI RGCGCY 1 cut(s) 3262
BglII AGATCT 1 cut(s) 3165
BisI GCNGC 8 cut(s) 197, 245, 845, 1238, 2433, 2502, 2690, 3262
BlnI CCTAGG 1 cut(s) 596
BlpI GCTNAGC 1 cut(s) 1725
BlsI GCNGC 8 cut(s) 198, 246, 846, 1239, 2434, 2503, 2691, 3263
BmcAI AGTACT 1 cut(s) 2862
Bme1390I CCNGG 4 cut(s) 738, 2065, 2337, 2784
Bme18I GGWCC 4 cut(s) 781, 1216, 1331, 1957
BmeT110I CYCGRG 1 cut(s) 2174
BmgT120I GGNCC 7 cut(s) 781, 917, 1216, 1331, 1957, 2067, 2780
BmrFI CCNGG 4 cut(s) 738, 2065, 2337, 2784
BmrI ACTGGG 3 cut(s) 170, 1432, 3183
BmuI ACTGGG 3 cut(s) 170, 1432, 3183
BoxI GACNNNNGTC 1 cut(s) 1086
BpiI GAAGAC 4 cut(s) 398, 418, 695, 2319
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BpmI CTGGAG 7 cut(s) 964, 1712, 1835, 2421, 2728, 2805, 3356
Bpu1102I GCTNAGC 1 cut(s) 1725
Bpu14I TTCGAA 2 cut(s) 409, 1635
BpuEI CTTGAG 2 cut(s) 2079, 2095
BpuMI CCSGG 1 cut(s) 2065
BsaAI YACGTR 1 cut(s) 3353
BsaBI GATNNNNATC 1 cut(s) 2169
BsaI GGTCTC 2 cut(s) 1370, 2381
BsaJI CCNNGG 6 cut(s) 596, 968, 2071, 2608, 2782, 3077
BsaWI WCCGGW 1 cut(s) 3304
BsaXI ACNNNNNCTCC 4 cut(s) 1632, 1662, 3170, 3200
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 1798, 3078
Bse3DI GCAATG 2 cut(s) 1278, 1792
Bse8I GATNNNNATC 1 cut(s) 2169
BseBI CCWGG 3 cut(s) 738, 2337, 2784
BseDI CCNNGG 6 cut(s) 596, 968, 2071, 2608, 2782, 3077
BseGI GGATG 5 cut(s) 907, 1178, 1519, 2740, 3087
BseJI GATNNNNATC 1 cut(s) 2169
BseLI CCNNNNNNNGG 3 cut(s) 608, 1798, 3078
BseMI GCAATG 2 cut(s) 1278, 1792
BseMII CTCAG 9 cut(s) 518, 631, 1041, 1365, 1665, 1739, 2003, 2436, 3114
BseRI GAGGAG 2 cut(s) 758, 1176
BseXI GCAGC 6 cut(s) 208, 256, 1249, 2444, 2488, 3248
BsgI GTGCAG 3 cut(s) 102, 1256, 2451
BshFI GGCC 6 cut(s) 601, 919, 2068, 2781, 3244, 3322
BshNI GGYRCC 1 cut(s) 3085
BsiHKCI CYCGRG 1 cut(s) 2174
BsiSI CCGG 2 cut(s) 2065, 3305
BslFI GGGAC 2 cut(s) 1126, 1229
BslI CCNNNNNNNGG 3 cut(s) 608, 1798, 3078
BsmAI GTCTC 9 cut(s) 1038, 1370, 1462, 1519, 1654, 2374, 2381, 2411, 3124
BsmBI CGTCTC 1 cut(s) 1038
BsmFI GGGAC 2 cut(s) 1126, 1229
BsmI GAATGC 1 cut(s) 1027
BsnI GGCC 6 cut(s) 601, 919, 2068, 2781, 3244, 3322
Bso31I GGTCTC 2 cut(s) 1370, 2381
BsoBI CYCGRG 1 cut(s) 2174
Bsp119I TTCGAA 2 cut(s) 409, 1635
Bsp1286I GDGCHC 1 cut(s) 881
Bsp1407I TGTACA 1 cut(s) 109
Bsp1720I GCTNAGC 1 cut(s) 1725
Bsp19I CCATGG 3 cut(s) 2071, 2608, 3077
BspANI GGCC 6 cut(s) 601, 919, 2068, 2781, 3244, 3322
BspCNI CTCAG 9 cut(s) 517, 630, 1040, 1366, 1664, 1738, 2002, 2437, 3115
BspHI TCATGA 1 cut(s) 808
BspMAI CTGCAG 3 cut(s) 147, 575, 2467
BspT104I TTCGAA 2 cut(s) 409, 1635
BspT107I GGYRCC 1 cut(s) 3085
BspTNI GGTCTC 2 cut(s) 1370, 2381
BsrBI CCGCTC 1 cut(s) 2689
BsrDI GCAATG 2 cut(s) 1278, 1792
BsrGI TGTACA 1 cut(s) 109
BssECI CCNNGG 6 cut(s) 596, 968, 2071, 2608, 2782, 3077
BssSI CACGAG 1 cut(s) 1613
BssT1I CCWWGG 4 cut(s) 596, 2071, 2608, 3077
Bst2BI CACGAG 1 cut(s) 1613
Bst2UI CCWGG 3 cut(s) 738, 2337, 2784
Bst4CI ACNGT 6 cut(s) 36, 396, 2086, 2602, 2803, 3186
Bst6I CTCTTC 2 cut(s) 1155, 3285
BstAUI TGTACA 1 cut(s) 109
BstBAI YACGTR 1 cut(s) 3353
BstBI TTCGAA 2 cut(s) 409, 1635
BstC8I GCNNGC 3 cut(s) 953, 1132, 2524
BstDSI CCRYGG 3 cut(s) 2071, 2608, 3077
BstEII GGTNACC 1 cut(s) 3300
BstF5I GGATG 5 cut(s) 907, 1178, 1519, 2740, 3087
BstH2I RGCGCY 1 cut(s) 3262
BstHHI GCGC 2 cut(s) 1412, 3261
BstMAI GTCTC 9 cut(s) 1038, 1370, 1462, 1519, 1654, 2374, 2381, 2411, 3124
BstMWI GCNNNNNNNGC 4 cut(s) 2354, 2507, 2689, 2804
BstNI CCWGG 3 cut(s) 738, 2337, 2784
BstNSI RCATGY 6 cut(s) 955, 1130, 1477, 1592, 2840, 3199
BstPAI GACNNNNGTC 1 cut(s) 1086
BstPI GGTNACC 1 cut(s) 3300
BstSCI CCNGG 4 cut(s) 736, 2063, 2335, 2782
BstSFI CTRYAG 5 cut(s) 143, 571, 2412, 2463, 2802
BstV1I GCAGC 6 cut(s) 208, 256, 1249, 2444, 2488, 3248
BstV2I GAAGAC 4 cut(s) 398, 418, 695, 2319
BstX2I RGATCY 6 cut(s) 259, 1155, 2582, 2983, 3165, 3307
BstXI CCANNNNNNTGG 1 cut(s) 737
BstYI RGATCY 6 cut(s) 259, 1155, 2582, 2983, 3165, 3307
BsuRI GGCC 6 cut(s) 601, 919, 2068, 2781, 3244, 3322
BtgI CCRYGG 3 cut(s) 2071, 2608, 3077
BtsCI GGATG 5 cut(s) 907, 1178, 1519, 2740, 3087
BtsI GCAGTG 2 cut(s) 1959, 2036
BtsIMutI CAGTG 6 cut(s) 1659, 1688, 1959, 2036, 2304, 2398
Cac8I GCNNGC 3 cut(s) 953, 1132, 2524
CaiI CAGNNNCTG 1 cut(s) 2444
CciI TCATGA 1 cut(s) 808
CfoI GCGC 2 cut(s) 1412, 3261
Cfr13I GGNCC 7 cut(s) 781, 917, 1216, 1331, 1957, 2067, 2780
CseI GACGC 1 cut(s) 1055
CspCI CAANNNNNGTGG 2 cut(s) 2280, 2315
DraI TTTAAA 2 cut(s) 228, 864
DrdI GACNNNNNNGTC 1 cut(s) 1511
DseDI GACNNNNNNGTC 1 cut(s) 1511
EaeI YGGCCR 1 cut(s) 3320
Eam1104I CTCTTC 2 cut(s) 1155, 3285
EarI CTCTTC 2 cut(s) 1155, 3285
Eco130I CCWWGG 4 cut(s) 596, 2071, 2608, 3077
Eco147I AGGCCT 1 cut(s) 3244
Eco24I GRGCYC 1 cut(s) 881
Eco31I GGTCTC 2 cut(s) 1370, 2381
Eco47I GGWCC 4 cut(s) 781, 1216, 1331, 1957
Eco47III AGCGCT 1 cut(s) 3260
Eco57I CTGAAG 4 cut(s) 846, 1136, 1337, 2124
Eco88I CYCGRG 1 cut(s) 2174
Eco91I GGTNACC 1 cut(s) 3300
EcoO109I RGGNCCY 3 cut(s) 781, 917, 1216
EcoO65I GGTNACC 1 cut(s) 3300
EcoRI GAATTC 4 cut(s) 125, 270, 2099, 2340
EcoRII CCWGG 3 cut(s) 736, 2335, 2782
EcoT14I CCWWGG 4 cut(s) 596, 2071, 2608, 3077
EcoT22I ATGCAT 2 cut(s) 1590, 3201
EcoT38I GRGCYC 1 cut(s) 881
ErhI CCWWGG 4 cut(s) 596, 2071, 2608, 3077
Esp3I CGTCTC 1 cut(s) 1038
FalI AAGNNNNNCTT 2 cut(s) 2122, 2154
FaqI GGGAC 2 cut(s) 1126, 1229
FauI CCCGC 1 cut(s) 2353
FauNDI CATATG 1 cut(s) 520
FbaI TGATCA 3 cut(s) 1324, 1668, 2023
FblI GTMKAC 1 cut(s) 2604
Fnu4HI GCNGC 8 cut(s) 197, 245, 845, 1238, 2433, 2502, 2690, 3262
FokI GGATG 5 cut(s) 894, 1165, 1506, 2727, 3094
FriOI GRGCYC 1 cut(s) 881
Fsp4HI GCNGC 8 cut(s) 197, 245, 845, 1238, 2433, 2502, 2690, 3262
FspBI CTAG 9 cut(s) 6, 375, 465, 597, 882, 956, 1008, 2843, 3047
GlaI GCGC 2 cut(s) 1411, 3260
GluI GCNGC 8 cut(s) 197, 245, 845, 1238, 2433, 2502, 2690, 3262
GsuI CTGGAG 7 cut(s) 964, 1712, 1835, 2421, 2728, 2805, 3356
HaeII RGCGCY 1 cut(s) 3262
HaeIII GGCC 6 cut(s) 601, 919, 2068, 2781, 3244, 3322
HapII CCGG 2 cut(s) 2065, 3305
HgaI GACGC 1 cut(s) 1055
HhaI GCGC 2 cut(s) 1412, 3261
Hin6I GCGC 2 cut(s) 1410, 3259
HinP1I GCGC 2 cut(s) 1410, 3259
HincII GTYRAC 2 cut(s) 1735, 3363
HindII GTYRAC 2 cut(s) 1735, 3363
HinfI GANTC 9 cut(s) 13, 293, 497, 1601, 2005, 2221, 2441, 2722, 3266
HpaII CCGG 2 cut(s) 2065, 3305
HphI GGTGA 9 cut(s) 506, 752, 1674, 1781, 2299, 2400, 2729, 2830, 3294
Hpy166II GTNNAC 8 cut(s) 110, 1124, 1735, 1957, 2034, 2605, 2941, 3363
Hpy8I GTNNAC 8 cut(s) 110, 1124, 1735, 1957, 2034, 2605, 2941, 3363
HpyCH4III ACNGT 6 cut(s) 36, 396, 2086, 2602, 2803, 3186
HpyCH4IV ACGT 2 cut(s) 1083, 3352
HpyF10VI GCNNNNNNNGC 4 cut(s) 2354, 2507, 2689, 2804
HpySE526I ACGT 2 cut(s) 1083, 3352
HspAI GCGC 2 cut(s) 1410, 3259
KflI GGGWCCC 1 cut(s) 1216
Ksp22I TGATCA 3 cut(s) 1324, 1668, 2023
LmnI GCTCC 3 cut(s) 745, 983, 2440
Lsp1109I GCAGC 6 cut(s) 208, 256, 1249, 2444, 2488, 3248
MaeI CTAG 9 cut(s) 6, 375, 465, 597, 882, 956, 1008, 2843, 3047
MaeII ACGT 2 cut(s) 1083, 3352
MbiI CCGCTC 1 cut(s) 2689
MflI RGATCY 6 cut(s) 259, 1155, 2582, 2983, 3165, 3307
MhlI GDGCHC 1 cut(s) 881
MlyI GAGTC 3 cut(s) 1595, 2450, 3260
Mph1103I ATGCAT 2 cut(s) 1590, 3201
MroXI GAANNNNTTC 1 cut(s) 2238
MslI CAYNNNNRTG 3 cut(s) 1269, 2745, 3204
MspA1I CMGCKG 3 cut(s) 332, 984, 1729
MspI CCGG 2 cut(s) 2065, 3305
MspR9I CCNGG 4 cut(s) 738, 2065, 2337, 2784
Mva1269I GAATGC 1 cut(s) 1027
MvaI CCWGG 3 cut(s) 738, 2337, 2784
MwoI GCNNNNNNNGC 4 cut(s) 2354, 2507, 2689, 2804
NciI CCSGG 1 cut(s) 2065
NcoI CCATGG 3 cut(s) 2071, 2608, 3077
NdeI CATATG 1 cut(s) 520
NmuCI GTSAC 9 cut(s) 68, 181, 901, 1010, 2253, 2287, 2458, 2957, 3300
NsiI ATGCAT 2 cut(s) 1590, 3201
NspI RCATGY 6 cut(s) 955, 1130, 1477, 1592, 2840, 3199
NspV TTCGAA 2 cut(s) 409, 1635
PaeI GCATGC 1 cut(s) 955
PagI TCATGA 1 cut(s) 808
PceI AGGCCT 1 cut(s) 3244
PcsI WCGNNNNNNNCGW 1 cut(s) 1620
PctI GAATGC 1 cut(s) 1027
PdmI GAANNNNTTC 1 cut(s) 2238
PfeI GAWTC 6 cut(s) 13, 293, 497, 2005, 2221, 2722
PflMI CCANNNNNTGG 1 cut(s) 608
PkrI GCNGC 8 cut(s) 198, 246, 846, 1239, 2434, 2503, 2691, 3263
PleI GAGTC 3 cut(s) 1595, 2449, 3260
PpsI GAGTC 3 cut(s) 1595, 2449, 3260
Ppu21I YACGTR 1 cut(s) 3353
PpuMI RGGWCCY 2 cut(s) 781, 1216
PshAI GACNNNNGTC 1 cut(s) 1086
Psp5II RGGWCCY 2 cut(s) 781, 1216
Psp6I CCWGG 3 cut(s) 736, 2335, 2782
PspEI GGTNACC 1 cut(s) 3300
PspGI CCWGG 3 cut(s) 736, 2335, 2782
PspPI GGNCC 7 cut(s) 781, 917, 1216, 1331, 1957, 2067, 2780
PspPPI RGGWCCY 2 cut(s) 781, 1216
PstI CTGCAG 3 cut(s) 147, 575, 2467
PstNI CAGNNNCTG 1 cut(s) 2444
PsuI RGATCY 6 cut(s) 259, 1155, 2582, 2983, 3165, 3307
PvuII CAGCTG 2 cut(s) 332, 1729
RseI CAYNNNNRTG 3 cut(s) 1269, 2745, 3204
SatI GCNGC 8 cut(s) 197, 245, 845, 1238, 2433, 2502, 2690, 3262
Sau96I GGNCC 7 cut(s) 781, 917, 1216, 1331, 1957, 2067, 2780
ScaI AGTACT 1 cut(s) 2862
SchI GAGTC 3 cut(s) 1595, 2450, 3260
ScrFI CCNGG 4 cut(s) 738, 2065, 2337, 2784
SduI GDGCHC 1 cut(s) 881
SfcI CTRYAG 5 cut(s) 143, 571, 2412, 2463, 2802
SfuI TTCGAA 2 cut(s) 409, 1635
SinI GGWCC 4 cut(s) 781, 1216, 1331, 1957
SmiI ATTTAAAT 1 cut(s) 228
SmiMI CAYNNNNRTG 3 cut(s) 1269, 2745, 3204
SmlI CTYRAG 2 cut(s) 2094, 2110
SmoI CTYRAG 2 cut(s) 2094, 2110
SpeI ACTAGT 3 cut(s) 5, 1007, 3046
SphI GCATGC 1 cut(s) 955
SseBI AGGCCT 1 cut(s) 3244
SspI AATATT 5 cut(s) 103, 591, 2153, 2918, 2935
SspMI CTAG 9 cut(s) 6, 375, 465, 597, 882, 956, 1008, 2843, 3047
StuI AGGCCT 1 cut(s) 3244
StyD4I CCNGG 4 cut(s) 736, 2063, 2335, 2782
StyI CCWWGG 4 cut(s) 596, 2071, 2608, 3077
SwaI ATTTAAAT 1 cut(s) 228
TaaI ACNGT 6 cut(s) 36, 396, 2086, 2602, 2803, 3186
TaiI ACGT 2 cut(s) 1086, 3355
TaqI TCGA 5 cut(s) 206, 409, 1623, 1635, 2217
TatI WGTACW 5 cut(s) 109, 1591, 1968, 2033, 2860
TauI GCSGC 2 cut(s) 847, 2692
TfiI GAWTC 6 cut(s) 13, 293, 497, 2005, 2221, 2722
TscAI CASTG 6 cut(s) 1659, 1695, 1959, 2036, 2304, 2398
TseFI GTSAC 9 cut(s) 68, 181, 901, 1010, 2253, 2287, 2458, 2957, 3300
TseI GCWGC 6 cut(s) 196, 244, 1237, 2432, 2501, 3261
Tsp45I GTSAC 9 cut(s) 68, 181, 901, 1010, 2253, 2287, 2458, 2957, 3300
TspDTI ATGAA 9 cut(s) 575, 698, 882, 1358, 1472, 1949, 2394, 2412, 2499
TspGWI ACGGA 1 cut(s) 149
TspRI CASTG 6 cut(s) 1659, 1695, 1959, 2036, 2304, 2398
Van91I CCANNNNNTGG 1 cut(s) 608
VpaK11BI GGWCC 4 cut(s) 781, 1216, 1331, 1957
XapI RAATTY 9 cut(s) 125, 270, 311, 1366, 1663, 1913, 2099, 2340, 2810
XceI RCATGY 6 cut(s) 955, 1130, 1477, 1592, 2840, 3199
XmaJI CCTAGG 1 cut(s) 596
XmiI GTMKAC 1 cut(s) 2604
XmnI GAANNNNTTC 1 cut(s) 2238
XspI CTAG 9 cut(s) 6, 375, 465, 597, 882, 956, 1008, 2843, 3047
ZrmI AGTACT 1 cut(s) 2862
Zsp2I ATGCAT 2 cut(s) 1590, 3201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.