Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0013335

Physical Location & Seq

Genomic Coordinates Forward (+)

2007615 .. 2012006

Gene Structure 4392 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G06560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGAGTAAAGCGAGGGTTCTGCTAAAACCCTCTTCCCTCACCACTTGCTTAACCAGAGCCAAGGCCTTCTTCTCCTCTGTTTCTCAGTCACGCTCTATCTCTCATCAGATGGAGATGGGTCCTTCCGATTCGGAGCGTTACTGTTATGATCCGGTACTGCGATGGAATCCTGAAGTTGAAGACTACTTCACTAAAGCTTATGGACCCGATCACTTTGCTCGCATTTCAAAGGCTCTCACGCGCCCATCTTCATACTCCTGCATTAGGGTGAACACTGTTAAAACGACGAGTGATGCGGTTATCGAAAAGCTTACGAAAATTTTAAACGACTCGGAGGAGGGCTTGAAGCTAGTACAACCAGATGGAAGTAGTCCCGTCACCAAGTGTCAGATACCTGGTTTGGATTATGTTGTCTTTGTCAATGGTTCAGGCCCACATAAGATAGAATATGATTCTGGTCTTGAAAACCCTCCAAAGGAGGTACTAGTGAGCAGGAAGTGTGCTGAAGCAGTTCTCAGAGGAGCCCAGGTCTATGTGCCAGGTGTACTGGCTTGCACTGCCCATGTTGAGAAAGGAGATGCGGTTGCTGTCTGTGTTGCTATGGAACAACCTGGTGATGAAGGTGACTGGAGTGTTAATATGACTCGTGGGACCACTCTCCAGGGGCTGCCAACAGATCCTTACTATCGTGAACGCAGTGGACTATATATCGGCATGGGAACAGCTATGTTGTCAAGGGCTGGGATGTTTCGTGTTCCTAATGGAATTGCGGTGGATTTGAACCATAGAGTTTTCAGATTGCCTTCTTTACATAATATCCTTGAGGGGGAAATATTTCTTCAAAACCTGCCAAGTATTATTGTTGCTCATGCTCTTGATCCTCAAAAAGGGGAGAGAATATTAGATATGTGTGCAGCACCTGGAGGGAAGACTACTGCAATTGCTATACTTATGAATGATGAGGGAGAGATAGTGGCAGCAGATAGATCTCATAACAAGGTGCTGGTTGTCCAGAACTTGTCTGCTGAAATGGGTTTTACCTGCATAACAACATGTAAATTAGATGCACTAAAATCTGTCTGTCTTCCGACCACACTCAATGAGTCCACAATATTAATTAACGGTGATAATAGTAGTTCCATGACCAGCCATTCTGAATTATCATCAAACGAGGAAATGACATCTGTTACTTCTAGAAGATCCGAGGCTGACAAATCATGTGAGAAAAATGACAGCACTGAACAGCCAAATGGAGGGGATAATGTTAGCCAAGCTTACATCAGGAAGAATAAAGGAAGGTTGAAAAATGGTCGTGGAAGAACTCAATGCCAAGGTGGAAGAGCTGGAAAATCACAAGGTTTCCCGCCTAATAGTTTCGATAGGGTCCTTTTAGATGCTCCTTGTTCTGCCCTTGGCTTGAGACCTCGTCTTTTCGCTGGACTGGAGACTGTTGTATCTTTGAGAAACCATGGATGGTACCAGCGGAAAATGTTGGACCAGGCTGTTCAATTGGTTCGCGTTGGTGGAATTCTTGTATACTCAACGTGCACAATTAACCCTAGCGAGAATGAGGCCGTGGTTCGCTATGCCCTGGATAAATACAGATTTCTTTCTTTAGCACCACAGCATCCTAGGATCGGAGGACCTGGTCTAGTTGGTCGATGTGAATTCCCAGACGGATATATCGAGGAGTGGTTAAAACCCGGTGAAGAAGAACTGGTTCAGAAATTCGACCCGTCATCTGAGCTCGATACCATCGGGTTCTTTATAGCAAAGTTCAGCGTCGGCCCCAAGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0001510 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008175 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016427 GO:0016428 GO:0016740 GO:0016741 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F PUA

Protein Analysis

599

Amino Acids

65.51

Weight (kDa)

6.62

Isoelectric Point (pI)

44.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUA	PF01472	160 - 198	1.9e-06	PUA domain
Methyltr_RsmB-F	PF01189	290 - 358	2.4e-15	16S rRNA methyltransferase RsmB/F
Methyltr_RsmB-F	PF01189	457 - 540	1.7e-17	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06560
fragaria_vesca	FvH4_6g38630 FvH4_6g38630
malus_domestica	MD09G1148800.v1.1 MD17G1135100.v1.1
prunus_persica	Prupe.3G177300_v2.0.a1 Prupe.3G177300_v2.0.a1
pyrus_communis	pycom09g06840 pycom17g12920
rosa_chinensis	RchiOBHm_Chr2g0152091
rosa_laevigata	RLG00000020607
rosa_multiflora	Rmu_co8372479.1_g000001 Rmu_sc0000760.1_g000014
rosa_roxburghii	Rroxscaffold_2G00095940
rosa_rugosa	Rorug02G0430900 Rorug02G0431000
rosa_samantha	Rh2DG515100
rosa_wichuraiana	Rw2G040410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	855, 1049
Acc65I	GGTACC	1 cut(s)	1476
AccB1I	GGYRCC	1 cut(s)	1476
AccI	GTMKAC	1 cut(s)	1536
AccII	CGCG	2 cut(s)	241, 1518
AciI	CCGC	5 cut(s)	296, 581, 770, 1364, 1483
AclWI	GGATC	5 cut(s)	143, 671, 872, 1194, 1643
AcsI	RAATTY	4 cut(s)	318, 1527, 1667, 1727
AcuI	CTGAAG	2 cut(s)	192, 525
AdeI	CACNNNGTG	1 cut(s)	384
AfaI	GTAC	5 cut(s)	156, 354, 483, 546, 1478
AfiI	CCNNNNNNNGG	6 cut(s)	264, 475, 826, 887, 1253, 1637
AflIII	ACRYGT	1 cut(s)	1052
AgsI	TTSAA	8 cut(s)	179, 228, 346, 464, 781, 842, 1303, 1508
AhlI	ACTAGT	1 cut(s)	484
AjnI	CCWGG	9 cut(s)	394, 525, 538, 610, 660, 919, 1497, 1590, 1645
AjuI	GAANNNNNNNTTGG	2 cut(s)	53, 85
AluBI	AGCT	7 cut(s)	197, 310, 349, 725, 1274, 1343, 1747
AluI	AGCT	7 cut(s)	197, 310, 349, 725, 1274, 1343, 1747
Alw21I	GWGCWC	2 cut(s)	1550, 1749
Alw26I	GTCTC	2 cut(s)	1414, 1439
Alw44I	GTGCAC	1 cut(s)	1546
AlwI	GGATC	5 cut(s)	143, 671, 872, 1194, 1643
AlwNI	CAGNNNCTG	2 cut(s)	667, 920
AoxI	GGCC	4 cut(s)	63, 430, 1572, 1786
ApaLI	GTGCAC	1 cut(s)	1546
ApeKI	GCWGC	3 cut(s)	667, 914, 977
ApoI	RAATTY	4 cut(s)	318, 1527, 1667, 1727
AseI	ATTAAT	1 cut(s)	1115
Asp700I	GAANNNNTTC	3 cut(s)	510, 834, 1719
Asp718I	GGTACC	1 cut(s)	1476
AspA2I	CCTAGG	1 cut(s)	1631
AspLEI	GCGC	1 cut(s)	243
AspS9I	GGNCC	8 cut(s)	119, 203, 431, 651, 1384, 1495, 1643, 1787
AsuC2I	CCSGG	1 cut(s)	1704
AsuHPI	GGTGA	7 cut(s)	31, 280, 370, 626, 635, 1136, 1718
AvaII	GGWCC	6 cut(s)	119, 203, 651, 1384, 1495, 1643
AvrII	CCTAGG	1 cut(s)	1631
BaeGI	GKGCMC	1 cut(s)	1550
BaeI	ACNNNNGTAYC	2 cut(s)	1437, 1470
BanI	GGYRCC	1 cut(s)	1476
BanII	GRGCYC	2 cut(s)	526, 1749
BauI	CACGAG	1 cut(s)	645
BbsI	GAAGAC	3 cut(s)	186, 935, 1076
Bbv12I	GWGCWC	2 cut(s)	1550, 1749
BbvI	GCAGC	3 cut(s)	654, 926, 989
BccI	CCATC	7 cut(s)	103, 109, 156, 253, 356, 1467, 1763
BceAI	ACGGC	1 cut(s)	1559
BcgI	CGANNNNNNTGC	3 cut(s)	35, 197, 231
BciT130I	CCWGG	9 cut(s)	396, 527, 540, 612, 662, 921, 1499, 1592, 1647
BcnI	CCSGG	1 cut(s)	1704
BcoDI	GTCTC	2 cut(s)	1414, 1439
BcuI	ACTAGT	1 cut(s)	484
BfaI	CTAG	6 cut(s)	350, 485, 1194, 1560, 1632, 1652
BfuAI	ACCTGC	2 cut(s)	855, 1049
BglII	AGATCT	1 cut(s)	986
BisI	GCNGC	3 cut(s)	668, 915, 978
BlnI	CCTAGG	1 cut(s)	1631
BlsI	GCNGC	3 cut(s)	669, 916, 979
Bme18I	GGWCC	6 cut(s)	119, 203, 651, 1384, 1495, 1643
BmgT120I	GGNCC	8 cut(s)	119, 203, 431, 651, 1384, 1495, 1643, 1787
BmiI	GGNNCC	7 cut(s)	120, 205, 523, 652, 1385, 1478, 1789
BmsI	GCATC	5 cut(s)	283, 568, 1054, 1384, 1636
BpiI	GAAGAC	3 cut(s)	186, 935, 1076
BpmI	CTGGAG	4 cut(s)	644, 649, 942, 1463
BpuEI	CTTGAG	2 cut(s)	842, 1438
BpuMI	CCSGG	1 cut(s)	1704
BsaI	GGTCTC	1 cut(s)	1414
BsaWI	WCCGGW	1 cut(s)	151
BsaXI	ACNNNNNCTCC	6 cut(s)	513, 543, 567, 597, 957, 987
Bsc4I	CCNNNNNNNGG	6 cut(s)	264, 475, 826, 887, 1253, 1637
Bse1I	ACTGG	4 cut(s)	552, 632, 1446, 1722
BseBI	CCWGG	9 cut(s)	396, 527, 540, 612, 662, 921, 1499, 1592, 1647
BseGI	GGATG	3 cut(s)	750, 1478, 1627
BseLI	CCNNNNNNNGG	6 cut(s)	264, 475, 826, 887, 1253, 1637
BseMII	CTCAG	3 cut(s)	98, 529, 1734
BseNI	ACTGG	4 cut(s)	552, 632, 1446, 1722
BseRI	GAGGAG	4 cut(s)	64, 350, 534, 1703
BseSI	GKGCMC	1 cut(s)	1550
BseXI	GCAGC	3 cut(s)	654, 926, 989
BseYI	CCCAGC	1 cut(s)	740
BsgI	GTGCAG	1 cut(s)	933
Bsh1236I	CGCG	2 cut(s)	241, 1518
BshFI	GGCC	4 cut(s)	65, 432, 1574, 1788
BshNI	GGYRCC	1 cut(s)	1476
BsiHKAI	GWGCWC	2 cut(s)	1550, 1749
BsiSI	CCGG	2 cut(s)	152, 1704
BslFI	GGGAC	2 cut(s)	357, 664
BslI	CCNNNNNNNGG	6 cut(s)	264, 475, 826, 887, 1253, 1637
BsmAI	GTCTC	2 cut(s)	1414, 1439
BsmFI	GGGAC	2 cut(s)	357, 664
BsnI	GGCC	4 cut(s)	65, 432, 1574, 1788
Bso31I	GGTCTC	1 cut(s)	1414
Bsp1286I	GDGCHC	3 cut(s)	526, 1550, 1749
Bsp143I	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
Bsp19I	CCATGG	1 cut(s)	1468
BspACI	CCGC	5 cut(s)	296, 581, 770, 1364, 1483
BspANI	GGCC	4 cut(s)	65, 432, 1574, 1788
BspCNI	CTCAG	3 cut(s)	97, 528, 1735
BspFNI	CGCG	2 cut(s)	241, 1518
BspLI	GGNNCC	7 cut(s)	120, 205, 523, 652, 1385, 1478, 1789
BspMI	ACCTGC	2 cut(s)	855, 1049
BspPI	GGATC	5 cut(s)	143, 671, 872, 1194, 1643
BspQI	GCTCTTC	1 cut(s)	1333
BspT107I	GGYRCC	1 cut(s)	1476
BspTNI	GGTCTC	1 cut(s)	1414
BsrI	ACTGG	4 cut(s)	552, 632, 1446, 1722
BssMI	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
BssNAI	GTATAC	1 cut(s)	1537
BssSI	CACGAG	1 cut(s)	645
BssT1I	CCWWGG	6 cut(s)	60, 1330, 1411, 1468, 1631, 1791
Bst1107I	GTATAC	1 cut(s)	1537
Bst2BI	CACGAG	1 cut(s)	645
Bst2UI	CCWGG	9 cut(s)	396, 527, 540, 612, 662, 921, 1499, 1592, 1647
Bst4CI	ACNGT	4 cut(s)	143, 277, 1124, 1450
Bst6I	CTCTTC	2 cut(s)	37, 1333
BstC8I	GCNNGC	2 cut(s)	220, 553
BstDEI	CTNAG	3 cut(s)	84, 515, 1743
BstDSI	CCRYGG	2 cut(s)	1468, 1575
BstENI	CCTNNNNNAGG	2 cut(s)	262, 885
BstF5I	GGATG	3 cut(s)	750, 1478, 1627
BstFNI	CGCG	2 cut(s)	241, 1518
BstHHI	GCGC	1 cut(s)	243
BstKTI	GATC	7 cut(s)	151, 211, 679, 880, 989, 1202, 1638
BstMAI	GTCTC	2 cut(s)	1414, 1439
BstMBI	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
BstMWI	GCNNNNNNNGC	1 cut(s)	557
BstNI	CCWGG	9 cut(s)	396, 527, 540, 612, 662, 921, 1499, 1592, 1647
BstNSI	RCATGY	1 cut(s)	1056
BstSLI	GKGCMC	1 cut(s)	1550
BstUI	CGCG	2 cut(s)	241, 1518
BstV1I	GCAGC	3 cut(s)	654, 926, 989
BstV2I	GAAGAC	3 cut(s)	186, 935, 1076
BstX2I	RGATCY	3 cut(s)	676, 986, 1199
BstYI	RGATCY	3 cut(s)	676, 986, 1199
BstZ17I	GTATAC	1 cut(s)	1537
BsuRI	GGCC	4 cut(s)	65, 432, 1574, 1788
BtgI	CCRYGG	2 cut(s)	1468, 1575
BtgZI	GCGATG	1 cut(s)	175
BtsCI	GGATG	3 cut(s)	750, 1478, 1627
BtsI	GCAGTG	2 cut(s)	555, 703
BtsIMutI	CAGTG	4 cut(s)	273, 555, 703, 1236
BveI	ACCTGC	2 cut(s)	855, 1049
Cac8I	GCNNGC	2 cut(s)	220, 553
CaiI	CAGNNNCTG	2 cut(s)	667, 920
CfoI	GCGC	1 cut(s)	243
Cfr13I	GGNCC	8 cut(s)	119, 203, 431, 651, 1384, 1495, 1643, 1787
CseI	GACGC	1 cut(s)	1771
CsiI	ACCWGGT	3 cut(s)	394, 610, 1645
Csp6I	GTAC	5 cut(s)	155, 353, 482, 545, 1477
CviAII	CATG	7 cut(s)	563, 715, 869, 1053, 1141, 1218, 1469
CviQI	GTAC	5 cut(s)	155, 353, 482, 545, 1477
DdeI	CTNAG	3 cut(s)	84, 515, 1743
DpnI	GATC	7 cut(s)	150, 210, 678, 879, 988, 1201, 1637
DpnII	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
DraI	TTTAAA	1 cut(s)	324
DraIII	CACNNNGTG	1 cut(s)	384
Eam1104I	CTCTTC	2 cut(s)	37, 1333
EarI	CTCTTC	2 cut(s)	37, 1333
Ecl136II	GAGCTC	1 cut(s)	1747
Eco130I	CCWWGG	6 cut(s)	60, 1330, 1411, 1468, 1631, 1791
Eco147I	AGGCCT	1 cut(s)	65
Eco24I	GRGCYC	2 cut(s)	526, 1749
Eco31I	GGTCTC	1 cut(s)	1414
Eco47I	GGWCC	6 cut(s)	119, 203, 651, 1384, 1495, 1643
Eco53kI	GAGCTC	1 cut(s)	1747
Eco57I	CTGAAG	2 cut(s)	192, 525
EcoICRI	GAGCTC	1 cut(s)	1747
EcoNI	CCTNNNNNAGG	2 cut(s)	262, 885
EcoO109I	RGGNCCY	3 cut(s)	119, 1384, 1643
EcoRI	GAATTC	2 cut(s)	1527, 1667
EcoRII	CCWGG	9 cut(s)	394, 525, 538, 610, 660, 919, 1497, 1590, 1645
EcoT14I	CCWWGG	6 cut(s)	60, 1330, 1411, 1468, 1631, 1791
EcoT38I	GRGCYC	2 cut(s)	526, 1749
ErhI	CCWWGG	6 cut(s)	60, 1330, 1411, 1468, 1631, 1791
FaeI	CATG	7 cut(s)	566, 718, 872, 1056, 1144, 1221, 1472
FalI	AAGNNNNNCTT	2 cut(s)	53, 85
FaqI	GGGAC	2 cut(s)	357, 664
FatI	CATG	7 cut(s)	562, 714, 868, 1052, 1140, 1217, 1468
FauI	CCCGC	1 cut(s)	1371
FblI	GTMKAC	1 cut(s)	1536
Fnu4HI	GCNGC	3 cut(s)	668, 915, 978
FokI	GGATG	3 cut(s)	757, 1485, 1614
FriOI	GRGCYC	2 cut(s)	526, 1749
Fsp4HI	GCNGC	3 cut(s)	668, 915, 978
FspBI	CTAG	6 cut(s)	350, 485, 1194, 1560, 1632, 1652
GlaI	GCGC	1 cut(s)	242
GluI	GCNGC	3 cut(s)	668, 915, 978
GsaI	CCCAGC	1 cut(s)	744
GsuI	CTGGAG	4 cut(s)	644, 649, 942, 1463
HaeIII	GGCC	4 cut(s)	65, 432, 1574, 1788
HapII	CCGG	2 cut(s)	152, 1704
HgaI	GACGC	1 cut(s)	1771
HhaI	GCGC	1 cut(s)	243
Hin1II	CATG	7 cut(s)	566, 718, 872, 1056, 1144, 1221, 1472
Hin6I	GCGC	1 cut(s)	241
HinP1I	GCGC	1 cut(s)	241
HindIII	AAGCTT	3 cut(s)	195, 308, 1272
HinfI	GANTC	6 cut(s)	128, 166, 329, 452, 643, 1103
HpaII	CCGG	2 cut(s)	152, 1704
HphI	GGTGA	7 cut(s)	31, 280, 370, 626, 635, 1136, 1718
Hpy166II	GTNNAC	7 cut(s)	271, 545, 692, 701, 1107, 1537, 1548
Hpy188III	TCNNGA	7 cut(s)	170, 461, 689, 875, 1012, 1194, 1282
Hpy8I	GTNNAC	7 cut(s)	271, 545, 692, 701, 1107, 1537, 1548
Hpy99I	CGWCG	2 cut(s)	289, 1787
HpyAV	CCTTC	5 cut(s)	76, 132, 614, 813, 1290
HpyCH4III	ACNGT	4 cut(s)	143, 277, 1124, 1450
HpyCH4IV	ACGT	1 cut(s)	1544
HpyCH4V	TGCA	7 cut(s)	261, 555, 914, 938, 1044, 1067, 1548
HpyF10VI	GCNNNNNNNGC	1 cut(s)	557
HpyF3I	CTNAG	3 cut(s)	84, 515, 1743
HpySE526I	ACGT	1 cut(s)	1544
Hsp92II	CATG	7 cut(s)	566, 718, 872, 1056, 1144, 1221, 1472
HspAI	GCGC	1 cut(s)	241
KpnI	GGTACC	1 cut(s)	1480
Kzo9I	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
LguI	GCTCTTC	1 cut(s)	1333
LmnI	GCTCC	3 cut(s)	133, 521, 1402
Lsp1109I	GCAGC	3 cut(s)	654, 926, 989
LweI	GCATC	5 cut(s)	283, 568, 1054, 1384, 1636
MabI	ACCWGGT	3 cut(s)	394, 610, 1645
MaeI	CTAG	6 cut(s)	350, 485, 1194, 1560, 1632, 1652
MaeII	ACGT	1 cut(s)	1544
MaeIII	GTNAC	5 cut(s)	87, 137, 376, 623, 1186
MalI	GATC	7 cut(s)	150, 210, 678, 879, 988, 1201, 1637
MboI	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
MfeI	CAATTG	2 cut(s)	939, 1508
MflI	RGATCY	3 cut(s)	676, 986, 1199
MhlI	GDGCHC	3 cut(s)	526, 1550, 1749
MlyI	GAGTC	3 cut(s)	323, 637, 1112
MmeI	TCCRAC	2 cut(s)	1112, 1473
MroXI	GAANNNNTTC	3 cut(s)	510, 834, 1719
MseI	TTAA	8 cut(s)	50, 279, 323, 636, 1115, 1119, 1554, 1697
MslI	CAYNNNNRTG	1 cut(s)	266
MspA1I	CMGCKG	1 cut(s)	1483
MspI	CCGG	2 cut(s)	152, 1704
MunI	CAATTG	2 cut(s)	939, 1508
MvaI	CCWGG	9 cut(s)	396, 527, 540, 612, 662, 921, 1499, 1592, 1647
MvnI	CGCG	2 cut(s)	241, 1518
MwoI	GCNNNNNNNGC	1 cut(s)	557
NciI	CCSGG	1 cut(s)	1704
NcoI	CCATGG	1 cut(s)	1468
NdeII	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
NlaIII	CATG	7 cut(s)	566, 718, 872, 1056, 1144, 1221, 1472
NlaIV	GGNNCC	7 cut(s)	120, 205, 523, 652, 1385, 1478, 1789
NmuCI	GTSAC	3 cut(s)	87, 376, 623
NspI	RCATGY	1 cut(s)	1056
PacI	TTAATTAA	1 cut(s)	1119
PceI	AGGCCT	1 cut(s)	65
PciI	ACATGT	1 cut(s)	1052
PciSI	GCTCTTC	1 cut(s)	1333
PcsI	WCGNNNNNNNCGW	1 cut(s)	1683
PdmI	GAANNNNTTC	3 cut(s)	510, 834, 1719
PfeI	GAWTC	3 cut(s)	128, 166, 452
PflFI	GACNNNGTC	2 cut(s)	1425, 1647
PkrI	GCNGC	3 cut(s)	669, 916, 979
PleI	GAGTC	3 cut(s)	323, 637, 1111
PpsI	GAGTC	3 cut(s)	323, 637, 1111
PpuMI	RGGWCCY	3 cut(s)	119, 1384, 1643
PscI	ACATGT	1 cut(s)	1052
PshBI	ATTAAT	1 cut(s)	1115
Psp124BI	GAGCTC	1 cut(s)	1749
Psp5II	RGGWCCY	3 cut(s)	119, 1384, 1643
Psp6I	CCWGG	9 cut(s)	394, 525, 538, 610, 660, 919, 1497, 1590, 1645
PspFI	CCCAGC	1 cut(s)	740
PspGI	CCWGG	9 cut(s)	394, 525, 538, 610, 660, 919, 1497, 1590, 1645
PspN4I	GGNNCC	7 cut(s)	120, 205, 523, 652, 1385, 1478, 1789
PspPI	GGNCC	8 cut(s)	119, 203, 431, 651, 1384, 1495, 1643, 1787
PspPPI	RGGWCCY	3 cut(s)	119, 1384, 1643
PstNI	CAGNNNCTG	2 cut(s)	667, 920
PsuI	RGATCY	3 cut(s)	676, 986, 1199
PsyI	GACNNNGTC	2 cut(s)	1425, 1647
RsaI	GTAC	5 cut(s)	156, 354, 483, 546, 1478
RsaNI	GTAC	5 cut(s)	155, 353, 482, 545, 1477
RseI	CAYNNNNRTG	1 cut(s)	266
SacI	GAGCTC	1 cut(s)	1749
SapI	GCTCTTC	1 cut(s)	1333
SaqAI	TTAA	8 cut(s)	50, 279, 323, 636, 1115, 1119, 1554, 1697
SatI	GCNGC	3 cut(s)	668, 915, 978
Sau3AI	GATC	7 cut(s)	148, 208, 676, 877, 986, 1199, 1635
Sau96I	GGNCC	8 cut(s)	119, 203, 431, 651, 1384, 1495, 1643, 1787
SchI	GAGTC	3 cut(s)	323, 637, 1112
SduI	GDGCHC	3 cut(s)	526, 1550, 1749
SexAI	ACCWGGT	3 cut(s)	394, 610, 1645
SfaNI	GCATC	5 cut(s)	283, 568, 1054, 1384, 1636
SinI	GGWCC	6 cut(s)	119, 203, 651, 1384, 1495, 1643
SmiMI	CAYNNNNRTG	1 cut(s)	266
SmlI	CTYRAG	2 cut(s)	821, 1417
SmoI	CTYRAG	2 cut(s)	821, 1417
SpeI	ACTAGT	1 cut(s)	484
SseBI	AGGCCT	1 cut(s)	65
SsiI	CCGC	5 cut(s)	296, 581, 770, 1364, 1483
SspI	AATATT	3 cut(s)	834, 900, 1113
SspMI	CTAG	6 cut(s)	350, 485, 1194, 1560, 1632, 1652
SstI	GAGCTC	1 cut(s)	1749
StuI	AGGCCT	1 cut(s)	65
StyI	CCWWGG	6 cut(s)	60, 1330, 1411, 1468, 1631, 1791
TaaI	ACNGT	4 cut(s)	143, 277, 1124, 1450
TaiI	ACGT	1 cut(s)	1547
TaqI	TCGA	6 cut(s)	303, 1377, 1660, 1686, 1731, 1749
TatI	WGTACW	2 cut(s)	352, 544
TfiI	GAWTC	3 cut(s)	128, 166, 452
Tru1I	TTAA	8 cut(s)	50, 279, 323, 636, 1115, 1119, 1554, 1697
Tru9I	TTAA	8 cut(s)	50, 279, 323, 636, 1115, 1119, 1554, 1697
TscAI	CASTG	4 cut(s)	280, 562, 703, 1243
TseFI	GTSAC	3 cut(s)	87, 376, 623
TseI	GCWGC	3 cut(s)	667, 914, 977
Tsp45I	GTSAC	3 cut(s)	87, 376, 623
TspDTI	ATGAA	3 cut(s)	240, 633, 968
TspGWI	ACGGA	1 cut(s)	1692
TspRI	CASTG	4 cut(s)	280, 562, 703, 1243
Tth111I	GACNNNGTC	2 cut(s)	1425, 1647
VneI	GTGCAC	1 cut(s)	1546
VpaK11BI	GGWCC	6 cut(s)	119, 203, 651, 1384, 1495, 1643
VspI	ATTAAT	1 cut(s)	1115
XagI	CCTNNNNNAGG	2 cut(s)	262, 885
XapI	RAATTY	4 cut(s)	318, 1527, 1667, 1727
XbaI	TCTAGA	1 cut(s)	1193
XceI	RCATGY	1 cut(s)	1056
XmaJI	CCTAGG	1 cut(s)	1631
XmiI	GTMKAC	1 cut(s)	1536
XmnI	GAANNNNTTC	3 cut(s)	510, 834, 1719
XspI	CTAG	6 cut(s)	350, 485, 1194, 1560, 1632, 1652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.