Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0013335

Physical Location & Seq

Genomic Coordinates Forward (+)

30586273 .. 30591366

Gene Structure 5094 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g38630.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGAAGAAGAAAGCGAGGGACTTGTTCAGAAGAAGCATCAGAAACTTCTTCACCGACCACCCGAAAATCATGGAACAACAGCAACAACGTTACAGTTACAACCCAACTCTGCGTTGGAATCCCGAGGTCGATTCCTACTTGTCCCACGCTTATGAACCCGACCATTTCTCCCGCATCTCCAAAGCTCTCACGCGGCCGTCTTGTTATTCATGTATAAGAGTGAACACACTCAAGTCCACACCGGATTCTGTTATCGAAAAGCTGAGAGATATTCTGAAAGGGGCTTCAATTTCCAAGTGTGAAGTTGAAGGTTTGGAGTACTTGGTGTTTGTTAAGGGCACAGGTCCCCACTCTGTTGATTACGGGTGTGATGAGGATGGCAATGTGAACCCTCCTCTTAAGGAGATTCTTGTTAGCCGGAAATGCGCCGAGGCGGTTCTTCGTGGTGCCGAGGTGTATGTTCCTGGTGTATTGGCTTGCAGTGCTCATGTGGAGAAAGGGGATGAGGTGGCGGTTTCGGTGTCGGTTGAGCAGCCCGGTGCTGAGGGGGGATGGGTGGTTGGGATCACTAGAGGGACTATTCTGCAAGGTGCTGAGACAGATCCTTATCATTTTGAACGGAGCGGGCTGTACATCGGCAGAGGTAACGCAATGATGACTAGGTCTGGCATTTTTCGTGCTCCTGAAGGAATTGCTGTGGATTTCAGTGACCGAGTATATAATCTGCCGTCCTTTCGTGGCGTTCTTGAGGGGGAAATATTTCTTCAAAATCTGCCAAGCATTGTAACTGCTCACGCTCTAGATCCTCAAAAAGGTGACCGCATACTAGACATGTGTGCTGCACCCGGAGGGAAAACAACTGCAATTGCAATTCTTATGAAGGATGAAGGGGAAATTGTTGCTGCTGATAGATCTCACAATAAGGTACTGGATATTCAGAAGTTGGCTGCTGAAATGGGCCTCAGTTGTATTACCACTTGCAGACTTGATGCTCTGAAAGCTGTTTGTAGTAGGAATGAATCTGATGATATAACTAAACTATGCTGCACTAACGATAATCTTGATGCAACAATTCAAGGTTTCAACTTGATGAAGTCAGAAGTAGAGAAAATTGAAGTGATTGCCGAAAAGGATCTTAAGAAAAATGTTACCAATGAAAAAGCGAATGAGAGAACTTACATTAGCAGAGCTGACATCAGGAAGGACATGCGTAGGAAACGGAATGGTCCAGGGAGAAATCAGTGCGTGGGTGGTAAGGCTGAGAAGTCAAAAGGCTTTGCTGCCAACAGCTTTGATCGGGTTCTTCTTGATGCTCCCTGCTCTGCACTTGGTTTAAGACCCCGACTGTTTGCTGGAGAGGAAACAGTTGAATCTTTGAGAAAACATGCCAAGTATCAAAGAAAAATGTTTGATCAGGCTGTTCAGCTAGTTCGCCCAGGTGGAGTTCTGGTGTATTCAACATGTACAATAAATCCTGGAGAGAATGAAGCCGTAGTTCGTTATGCTTTGGATACCTATAAATTCCTATCCTTGGCGCAACAGAACCCCAGAATTGGAGGACCTGGTTTAGTTGGCCATTTTGAATTTCCTGATGGATATACTGAGGAGTGGCTGAGACTTGGTCAGGAAGAACTTGTTCAAAGGTTTGATCCTTCGTCTCCACTTGATACAATCGGATTTTTCATTGCCAAGTTTTTAGTTGGATCAAAAGAGGCTGACTTGGAACAACCTGCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0001510 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008175 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016427 GO:0016428 GO:0016740 GO:0016741 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F PUA

Protein Analysis

580

Amino Acids

64.16

Weight (kDa)

6.81

Isoelectric Point (pI)

34.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUA	PF01472	135 - 172	3.8e-06	PUA domain
Methyltr_RsmB-F	PF01189	265 - 334	1.1e-15	16S rRNA methyltransferase RsmB/F
Methyltr_RsmB-F	PF01189	414 - 512	1.3e-19	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06560
fragaria_vesca	FvH4_6g38630 FvH4_6g38630
malus_domestica	MD09G1148800.v1.1 MD17G1135100.v1.1
prunus_persica	Prupe.3G177300_v2.0.a1 Prupe.3G177300_v2.0.a1
pyrus_communis	pycom09g06840 pycom17g12920
rosa_chinensis	RchiOBHm_Chr2g0152091
rosa_laevigata	RLG00000020607
rosa_multiflora	Rmu_co8372479.1_g000001 Rmu_sc0000760.1_g000014
rosa_roxburghii	Rroxscaffold_2G00095940
rosa_rugosa	Rorug02G0430900 Rorug02G0431000
rosa_samantha	Rh2DG515100
rosa_wichuraiana	Rw2G040410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	446
AccBSI	CCGCTC	1 cut(s)	624
AccII	CGCG	1 cut(s)	193
AciI	CCGC	6 cut(s)	172, 193, 434, 512, 624, 820
AclI	AACGTT	1 cut(s)	88
AclWI	GGATC	6 cut(s)	572, 596, 797, 1140, 1643, 1711
AcoI	YGGCCR	2 cut(s)	194, 1573
AcsI	RAATTY	2 cut(s)	1520, 1583
AcuI	CTGAAG	1 cut(s)	705
AfaI	GTAC	4 cut(s)	320, 632, 927, 1465
AfiI	CCNNNNNNNGG	3 cut(s)	812, 1531, 1553
AflII	CTTAAG	2 cut(s)	398, 1136
AflIII	ACRYGT	2 cut(s)	831, 1460
AjnI	CCWGG	5 cut(s)	463, 1228, 1435, 1474, 1561
AluBI	AGCT	6 cut(s)	185, 262, 1001, 1190, 1290, 1426
AluI	AGCT	6 cut(s)	185, 262, 1001, 1190, 1290, 1426
Alw21I	GWGCWC	2 cut(s)	487, 682
Alw26I	GTCTC	3 cut(s)	590, 1609, 1662
AlwI	GGATC	6 cut(s)	572, 596, 797, 1140, 1643, 1711
Ama87I	CYCGRG	1 cut(s)	122
AoxI	GGCC	3 cut(s)	194, 958, 1573
ApeKI	GCWGC	6 cut(s)	532, 839, 902, 947, 1044, 1280
ApoI	RAATTY	2 cut(s)	1520, 1583
Asp700I	GAANNNNTTC	2 cut(s)	759, 1635
AspLEI	GCGC	2 cut(s)	428, 1537
AspS9I	GGNCC	4 cut(s)	344, 958, 1226, 1559
AsuC2I	CCSGG	2 cut(s)	537, 846
AsuHPI	GGTGA	2 cut(s)	43, 827
AvaI	CYCGRG	1 cut(s)	122
AvaII	GGWCC	3 cut(s)	344, 1226, 1559
BaeGI	GKGCMC	1 cut(s)	341
BalI	TGGCCA	1 cut(s)	1575
BanI	GGYRCC	1 cut(s)	446
Bbv12I	GWGCWC	2 cut(s)	487, 682
BbvCI	CCTCAGC	1 cut(s)	543
BbvI	GCAGC	6 cut(s)	544, 826, 889, 934, 1031, 1267
BccI	CCATC	3 cut(s)	371, 546, 1586
BceAI	ACGGC	3 cut(s)	181, 712, 1475
BciT130I	CCWGG	5 cut(s)	465, 1230, 1437, 1476, 1563
BciVI	GTATCC	1 cut(s)	1504
BclI	TGATCA	1 cut(s)	1411
BcnI	CCSGG	2 cut(s)	537, 846
BcoDI	GTCTC	3 cut(s)	590, 1609, 1662
BfaI	CTAG	5 cut(s)	570, 660, 800, 827, 1427
BfrI	CTTAAG	2 cut(s)	398, 1136
BfuI	GTATCC	1 cut(s)	1504
BglII	AGATCT	1 cut(s)	911
BisI	GCNGC	7 cut(s)	194, 533, 840, 903, 948, 1045, 1281
BlsI	GCNGC	7 cut(s)	195, 534, 841, 904, 949, 1046, 1282
BmcAI	AGTACT	1 cut(s)	320
Bme1390I	CCNGG	7 cut(s)	465, 537, 846, 1230, 1437, 1476, 1563
Bme18I	GGWCC	3 cut(s)	344, 1226, 1559
BmeT110I	CYCGRG	1 cut(s)	122
BmgT120I	GGNCC	4 cut(s)	344, 958, 1226, 1559
BmiI	GGNNCC	2 cut(s)	346, 448
BmrFI	CCNGG	7 cut(s)	465, 537, 846, 1230, 1437, 1476, 1563
BmsI	GCATC	5 cut(s)	45, 183, 979, 1054, 1300
BpmI	CTGGAG	2 cut(s)	1374, 1497
Bpu10I	CCTNAGC	1 cut(s)	543
BpuEI	CTTGAG	2 cut(s)	215, 767
BpuMI	CCSGG	2 cut(s)	537, 846
BsaBI	GATNNNNATC	1 cut(s)	606
BsaJI	CCNNGG	6 cut(s)	123, 429, 450, 1229, 1435, 1530
BsaWI	WCCGGW	1 cut(s)	241
BsaXI	ACNNNNNCTCC	4 cut(s)	152, 182, 1434, 1464
Bsc4I	CCNNNNNNNGG	3 cut(s)	812, 1531, 1553
Bse1I	ACTGG	1 cut(s)	933
Bse3DI	GCAATG	3 cut(s)	388, 657, 1683
Bse8I	GATNNNNATC	1 cut(s)	606
BseBI	CCWGG	5 cut(s)	465, 1230, 1437, 1476, 1563
BseDI	CCNNGG	6 cut(s)	123, 429, 450, 1229, 1435, 1530
BseGI	GGATG	4 cut(s)	382, 508, 557, 889
BseJI	GATNNNNATC	1 cut(s)	606
BseLI	CCNNNNNNNGG	3 cut(s)	812, 1531, 1553
BseMI	GCAATG	3 cut(s)	388, 657, 1683
BseMII	CTCAG	7 cut(s)	254, 534, 585, 976, 1251, 1593, 1604
BseNI	ACTGG	1 cut(s)	933
BseRI	GAGGAG	2 cut(s)	384, 1619
BseSI	GKGCMC	1 cut(s)	341
BseX3I	CGGCCG	1 cut(s)	194
BseXI	GCAGC	6 cut(s)	544, 826, 889, 934, 1031, 1267
BsgI	GTGCAG	3 cut(s)	825, 1030, 1308
Bsh1236I	CGCG	1 cut(s)	193
Bsh1285I	CGRYCG	1 cut(s)	197
BshFI	GGCC	3 cut(s)	196, 960, 1575
BshNI	GGYRCC	1 cut(s)	446
BsiEI	CGRYCG	1 cut(s)	197
BsiHKAI	GWGCWC	2 cut(s)	487, 682
BsiHKCI	CYCGRG	1 cut(s)	122
BsiSI	CCGG	4 cut(s)	242, 418, 537, 846
BslFI	GGGAC	4 cut(s)	32, 127, 330, 589
BslI	CCNNNNNNNGG	3 cut(s)	812, 1531, 1553
BsmAI	GTCTC	3 cut(s)	590, 1609, 1662
BsmBI	CGTCTC	1 cut(s)	1662
BsmFI	GGGAC	4 cut(s)	32, 127, 330, 589
BsnI	GGCC	3 cut(s)	196, 960, 1575
BsoBI	CYCGRG	1 cut(s)	122
Bsp1286I	GDGCHC	3 cut(s)	341, 487, 682
Bsp1407I	TGTACA	2 cut(s)	630, 1463
Bsp143I	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
BspACI	CCGC	6 cut(s)	172, 193, 434, 512, 624, 820
BspANI	GGCC	3 cut(s)	196, 960, 1575
BspCNI	CTCAG	7 cut(s)	255, 535, 586, 975, 1252, 1594, 1605
BspFNI	CGCG	1 cut(s)	193
BspLI	GGNNCC	2 cut(s)	346, 448
BspPI	GGATC	6 cut(s)	572, 596, 797, 1140, 1643, 1711
BspT107I	GGYRCC	1 cut(s)	446
BspTI	CTTAAG	2 cut(s)	398, 1136
BsrBI	CCGCTC	1 cut(s)	624
BsrDI	GCAATG	3 cut(s)	388, 657, 1683
BsrGI	TGTACA	2 cut(s)	630, 1463
BsrI	ACTGG	1 cut(s)	933
BssECI	CCNNGG	6 cut(s)	123, 429, 450, 1229, 1435, 1530
BssMI	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
BssT1I	CCWWGG	1 cut(s)	1530
Bst2UI	CCWGG	5 cut(s)	465, 1230, 1437, 1476, 1563
Bst4CI	ACNGT	3 cut(s)	95, 1347, 1366
BstAFI	CTTAAG	2 cut(s)	398, 1136
BstAUI	TGTACA	2 cut(s)	630, 1463
BstC8I	GCNNGC	2 cut(s)	478, 626
BstDEI	CTNAG	7 cut(s)	263, 543, 594, 962, 1260, 1602, 1613
BstEII	GGTNACC	1 cut(s)	815
BstENI	CCTNNNNNAGG	1 cut(s)	810
BstF5I	GGATG	4 cut(s)	382, 508, 557, 889
BstFNI	CGCG	1 cut(s)	193
BstHHI	GCGC	2 cut(s)	428, 1537
BstKTI	GATC	9 cut(s)	567, 604, 805, 914, 1135, 1297, 1414, 1651, 1706
BstMAI	GTCTC	3 cut(s)	590, 1609, 1662
BstMBI	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
BstMCI	CGRYCG	1 cut(s)	197
BstMWI	GCNNNNNNNGC	3 cut(s)	423, 482, 998
BstNI	CCWGG	5 cut(s)	465, 1230, 1437, 1476, 1563
BstNSI	RCATGY	4 cut(s)	835, 1210, 1388, 1464
BstPI	GGTNACC	1 cut(s)	815
BstSCI	CCNGG	7 cut(s)	463, 535, 844, 1228, 1435, 1474, 1561
BstSLI	GKGCMC	1 cut(s)	341
BstUI	CGCG	1 cut(s)	193
BstV1I	GCAGC	6 cut(s)	544, 826, 889, 934, 1031, 1267
BstX2I	RGATCY	4 cut(s)	601, 802, 911, 1132
BstYI	RGATCY	4 cut(s)	601, 802, 911, 1132
BstZI	CGGCCG	1 cut(s)	194
BsuI	GTATCC	1 cut(s)	1504
BsuRI	GGCC	3 cut(s)	196, 960, 1575
BtsCI	GGATG	4 cut(s)	382, 508, 557, 889
BtsI	GCAGTG	1 cut(s)	487
BtsIMutI	CAGTG	3 cut(s)	487, 712, 1247
Cac8I	GCNNGC	2 cut(s)	478, 626
CfoI	GCGC	2 cut(s)	428, 1537
Cfr13I	GGNCC	4 cut(s)	344, 958, 1226, 1559
CsiI	ACCWGGT	1 cut(s)	1561
Csp6I	GTAC	4 cut(s)	319, 631, 926, 1464
CviAII	CATG	7 cut(s)	70, 210, 488, 832, 1207, 1385, 1461
CviQI	GTAC	4 cut(s)	319, 631, 926, 1464
DdeI	CTNAG	7 cut(s)	263, 543, 594, 962, 1260, 1602, 1613
DpnI	GATC	9 cut(s)	566, 603, 804, 913, 1134, 1296, 1413, 1650, 1705
DpnII	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
EaeI	YGGCCR	2 cut(s)	194, 1573
EagI	CGGCCG	1 cut(s)	194
EclXI	CGGCCG	1 cut(s)	194
Eco130I	CCWWGG	1 cut(s)	1530
Eco47I	GGWCC	3 cut(s)	344, 1226, 1559
Eco52I	CGGCCG	1 cut(s)	194
Eco57I	CTGAAG	1 cut(s)	705
Eco88I	CYCGRG	1 cut(s)	122
Eco91I	GGTNACC	1 cut(s)	815
EcoNI	CCTNNNNNAGG	1 cut(s)	810
EcoO109I	RGGNCCY	2 cut(s)	344, 1559
EcoO65I	GGTNACC	1 cut(s)	815
EcoRII	CCWGG	5 cut(s)	463, 1228, 1435, 1474, 1561
EcoT14I	CCWWGG	1 cut(s)	1530
ErhI	CCWWGG	1 cut(s)	1530
Esp3I	CGTCTC	1 cut(s)	1662
FaeI	CATG	7 cut(s)	73, 213, 491, 835, 1210, 1388, 1464
FaqI	GGGAC	4 cut(s)	32, 127, 330, 589
FatI	CATG	7 cut(s)	69, 209, 487, 831, 1206, 1384, 1460
FauI	CCCGC	2 cut(s)	179, 617
FbaI	TGATCA	1 cut(s)	1411
Fnu4HI	GCNGC	7 cut(s)	194, 533, 840, 903, 948, 1045, 1281
FokI	GGATG	4 cut(s)	389, 515, 564, 896
Fsp4HI	GCNGC	7 cut(s)	194, 533, 840, 903, 948, 1045, 1281
FspBI	CTAG	5 cut(s)	570, 660, 800, 827, 1427
GlaI	GCGC	2 cut(s)	427, 1536
GluI	GCNGC	7 cut(s)	194, 533, 840, 903, 948, 1045, 1281
GsuI	CTGGAG	2 cut(s)	1374, 1497
HaeIII	GGCC	3 cut(s)	196, 960, 1575
HapII	CCGG	4 cut(s)	242, 418, 537, 846
HhaI	GCGC	2 cut(s)	428, 1537
Hin1II	CATG	7 cut(s)	73, 213, 491, 835, 1210, 1388, 1464
Hin6I	GCGC	2 cut(s)	426, 1535
HinP1I	GCGC	2 cut(s)	426, 1535
HinfI	GANTC	6 cut(s)	118, 131, 245, 406, 1019, 1370
HpaII	CCGG	4 cut(s)	242, 418, 537, 846
HphI	GGTGA	2 cut(s)	43, 827
Hpy166II	GTNNAC	3 cut(s)	223, 237, 388
Hpy188I	TCNGA	8 cut(s)	29, 41, 276, 939, 996, 1024, 1099, 1676
Hpy188III	TCNNGA	9 cut(s)	122, 683, 746, 800, 1061, 1198, 1307, 1589, 1625
Hpy8I	GTNNAC	3 cut(s)	223, 237, 388
HpyAV	CCTTC	6 cut(s)	302, 680, 874, 881, 1195, 1662
HpyCH4III	ACNGT	3 cut(s)	95, 1347, 1366
HpyCH4IV	ACGT	1 cut(s)	88
HpyF10VI	GCNNNNNNNGC	3 cut(s)	423, 482, 998
HpyF3I	CTNAG	7 cut(s)	263, 543, 594, 962, 1260, 1602, 1613
HpySE526I	ACGT	1 cut(s)	88
Hsp92II	CATG	7 cut(s)	73, 213, 491, 835, 1210, 1388, 1464
HspAI	GCGC	2 cut(s)	426, 1535
Ksp22I	TGATCA	1 cut(s)	1411
Kzo9I	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
LmnI	GCTCC	3 cut(s)	621, 685, 1318
Lsp1109I	GCAGC	6 cut(s)	544, 826, 889, 934, 1031, 1267
LweI	GCATC	5 cut(s)	45, 183, 979, 1054, 1300
MabI	ACCWGGT	1 cut(s)	1561
MaeI	CTAG	5 cut(s)	570, 660, 800, 827, 1427
MaeII	ACGT	1 cut(s)	88
MaeIII	GTNAC	7 cut(s)	89, 95, 644, 707, 784, 815, 1147
MalI	GATC	9 cut(s)	566, 603, 804, 913, 1134, 1296, 1413, 1650, 1705
MbiI	CCGCTC	1 cut(s)	624
MboI	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
MboII	GAAGA	8 cut(s)	16, 19, 40, 42, 431, 755, 1295, 1640
MfeI	CAATTG	1 cut(s)	864
MflI	RGATCY	4 cut(s)	601, 802, 911, 1132
MhlI	GDGCHC	3 cut(s)	341, 487, 682
MlsI	TGGCCA	1 cut(s)	1575
MluNI	TGGCCA	1 cut(s)	1575
MmeI	TCCRAC	2 cut(s)	95, 1681
Mox20I	TGGCCA	1 cut(s)	1575
MroXI	GAANNNNTTC	2 cut(s)	759, 1635
MscI	TGGCCA	1 cut(s)	1575
MseI	TTAA	4 cut(s)	333, 399, 1137, 1334
MslI	CAYNNNNRTG	1 cut(s)	150
Msp20I	TGGCCA	1 cut(s)	1575
MspCI	CTTAAG	2 cut(s)	398, 1136
MspI	CCGG	4 cut(s)	242, 418, 537, 846
MspR9I	CCNGG	7 cut(s)	465, 537, 846, 1230, 1437, 1476, 1563
MunI	CAATTG	1 cut(s)	864
MvaI	CCWGG	5 cut(s)	465, 1230, 1437, 1476, 1563
MvnI	CGCG	1 cut(s)	193
MwoI	GCNNNNNNNGC	3 cut(s)	423, 482, 998
NciI	CCSGG	2 cut(s)	537, 846
NdeII	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
NlaIII	CATG	7 cut(s)	73, 213, 491, 835, 1210, 1388, 1464
NlaIV	GGNNCC	2 cut(s)	346, 448
NmeAIII	GCCGAG	2 cut(s)	454, 475
NmuCI	GTSAC	2 cut(s)	707, 815
NspI	RCATGY	4 cut(s)	835, 1210, 1388, 1464
PciI	ACATGT	2 cut(s)	831, 1460
PdmI	GAANNNNTTC	2 cut(s)	759, 1635
PfeI	GAWTC	6 cut(s)	118, 131, 245, 406, 1019, 1370
PflFI	GACNNNGTC	2 cut(s)	661, 1620
PfoI	TCCNGGA	1 cut(s)	1474
PkrI	GCNGC	7 cut(s)	195, 534, 841, 904, 949, 1046, 1282
PpuMI	RGGWCCY	2 cut(s)	344, 1559
PscI	ACATGT	2 cut(s)	831, 1460
Psp1406I	AACGTT	1 cut(s)	88
Psp5II	RGGWCCY	2 cut(s)	344, 1559
Psp6I	CCWGG	5 cut(s)	463, 1228, 1435, 1474, 1561
PspEI	GGTNACC	1 cut(s)	815
PspGI	CCWGG	5 cut(s)	463, 1228, 1435, 1474, 1561
PspN4I	GGNNCC	2 cut(s)	346, 448
PspPI	GGNCC	4 cut(s)	344, 958, 1226, 1559
PspPPI	RGGWCCY	2 cut(s)	344, 1559
PsuI	RGATCY	4 cut(s)	601, 802, 911, 1132
PsyI	GACNNNGTC	2 cut(s)	661, 1620
RsaI	GTAC	4 cut(s)	320, 632, 927, 1465
RsaNI	GTAC	4 cut(s)	319, 631, 926, 1464
RseI	CAYNNNNRTG	1 cut(s)	150
SaqAI	TTAA	4 cut(s)	333, 399, 1137, 1334
SatI	GCNGC	7 cut(s)	194, 533, 840, 903, 948, 1045, 1281
Sau3AI	GATC	9 cut(s)	564, 601, 802, 911, 1132, 1294, 1411, 1648, 1703
Sau96I	GGNCC	4 cut(s)	344, 958, 1226, 1559
ScaI	AGTACT	1 cut(s)	320
ScrFI	CCNGG	7 cut(s)	465, 537, 846, 1230, 1437, 1476, 1563
SduI	GDGCHC	3 cut(s)	341, 487, 682
SexAI	ACCWGGT	1 cut(s)	1561
SfaNI	GCATC	5 cut(s)	45, 183, 979, 1054, 1300
SinI	GGWCC	3 cut(s)	344, 1226, 1559
SmiMI	CAYNNNNRTG	1 cut(s)	150
SmlI	CTYRAG	4 cut(s)	230, 398, 746, 1136
SmoI	CTYRAG	4 cut(s)	230, 398, 746, 1136
SsiI	CCGC	6 cut(s)	172, 193, 434, 512, 624, 820
SspI	AATATT	1 cut(s)	759
SspMI	CTAG	5 cut(s)	570, 660, 800, 827, 1427
StyD4I	CCNGG	7 cut(s)	463, 535, 844, 1228, 1435, 1474, 1561
StyI	CCWWGG	1 cut(s)	1530
TaaI	ACNGT	3 cut(s)	95, 1347, 1366
TaiI	ACGT	1 cut(s)	91
TaqI	TCGA	2 cut(s)	129, 255
TaqII	GACCGA	1 cut(s)	726
TatI	WGTACW	3 cut(s)	318, 630, 1463
TauI	GCSGC	1 cut(s)	196
TfiI	GAWTC	6 cut(s)	118, 131, 245, 406, 1019, 1370
Tru1I	TTAA	4 cut(s)	333, 399, 1137, 1334
Tru9I	TTAA	4 cut(s)	333, 399, 1137, 1334
TscAI	CASTG	3 cut(s)	487, 712, 1247
TseFI	GTSAC	2 cut(s)	707, 815
TseI	GCWGC	6 cut(s)	532, 839, 902, 947, 1044, 1280
Tsp45I	GTSAC	2 cut(s)	707, 815
TspGWI	ACGGA	2 cut(s)	634, 1234
TspRI	CASTG	3 cut(s)	487, 712, 1247
Tth111I	GACNNNGTC	2 cut(s)	661, 1620
Vha464I	CTTAAG	2 cut(s)	398, 1136
VpaK11BI	GGWCC	3 cut(s)	344, 1226, 1559
XagI	CCTNNNNNAGG	1 cut(s)	810
XapI	RAATTY	2 cut(s)	1520, 1583
XbaI	TCTAGA	1 cut(s)	799
XceI	RCATGY	4 cut(s)	835, 1210, 1388, 1464
XcmI	CCANNNNNNNNNTGG	1 cut(s)	111
XmnI	GAANNNNTTC	2 cut(s)	759, 1635
XspI	CTAG	5 cut(s)	570, 660, 800, 827, 1427
ZrmI	AGTACT	1 cut(s)	320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.