Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013335

Physical Location & Seq

Genomic Coordinates Forward (+)

66695715 .. 66699648

Gene Structure 3934 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020607

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1698 bp

ATGGAGACTTCACGCCAACAGCAACAGCGTTACAGTTACAACCCAACTCTGCGTTGGAATCCCGAGGTCGAATCCTACTTGTCCAACGCTTATGGACCCGCACATTTCTCTCGCATCTCCAAAGCCCTAACGCGGCCGTCTTGTTATTCTTGTATAAGAGTGAACACATTGAAGTCCACGCCAGACTCCGTTATCGAGAAGTTGAGAGAGATTCTGAAAGGGGTTTCTATTTCCAAGTGTGAAGTTCCGGGTTTGGAGTACTTGGTGTTTGTGAAGGGCTCAGGTCCTCACTCAGTTGATTACGGGTGTGATGAGGTTGGGAATGTGAAGCATCCTCTTAAGGAGGTGCTTGTGAGCCGGAAATGTGCTGAGGCGGTTCTTCGTGGTGCCGAGGTGTATGTTCCTGGTGTACTGGCTTGCAGTGCTCATGTTGAGAAGGGGGATGAGGTTGCGGTTTCGGTGTCGGTTGAGCAGCCCGGTGCTGAGGGTGGATGGCTGGTTGGGATCACTAGAGGGACTATTCTGCAAGGTGCTGAGACAGATCCTTATCATTTTGAAAGGAGCGGGCTGTATATTGGCCGAGGTAAAGCAACGATGTCAAGGTCTGGGATTTTTCGTGCTCCTGAAGGAATTGCTGTGGATTTCAGTGACAGAGTATATGATCTGCCTTCGTTTCGTGGCGTGCTTGAGGGGGAAATATTTCTTCAAAATCTGCCAAGCATTGTCACTGCTCATGCTCTGGATCCTCAAAAAGGTGAGCGCATACTAGACATGTGTGCTGCACCTGGAGGGAAAACAACTGCAATTGCAATTCTTATGAAGGATGAAGGGGAAATTGTTGCCGCTGATAGATCTCACAATAAGGTACTGGATATTCAGAAATTGGCTGCTGAAATGGGCCTTAGTTGTATTACCACTTGCAGACTTGATGCTCTGAAAGCTGTTTGTAGTCGTAATGAATCTGATAATATAACTAATCATTGCTGCACTGAGGATAAATGTGATGTAACAATTCAAGGTTCCAACTTGTTGAAGTCAGAAGTAGAGAAAATTGAAGTGATTGCCACAGACAGGTTGAATGCCGAAAAGGATTTTAAGAAAAATGTTACCAATGAAAAAGCGAATGAGAGAATTTACATTAGCAGAGCTGACATCAGGAAGGATATGCGAAGGAAACGGAATGGTCCAGGAAGAAATCAGTGTGTGGGTGGTAAGGCTGAGAAGTCAAAAGGCTTTGCTCCCAACAGCTTTGATCGGGTTCTTCTAGATGCTCCTTGCTCTGCCCTTGGTTTAAGACCTCGACTATTTGCTGGAGAGGAAACAGTCGAATCCTTGAGAAAGCATGCAAAGTATCAAAGGAAAATGTTTGATCAGGCTGTTCAGCTAGTTCGTCCGGGTGGAGTTCTTGTGTATTCAACATGTACAATAAATCCCGGAGAGAATGAAGCTGTGGTTCGATATGCTTTGGATACCTACAAATTCCTATCCTTGGCATCACAGAACCCCAGAATTGGAGGACCTGGTCTAGTTGGCCGTTTTGAATTCCCTGATGGATATACTGAGGAGTGGCTAAGACCTGGTCAGGAAGAACTTGTTCAGAGGTTCGATCCATCGTCTCCGCTCGATACGATCGGGTTTTTCATAGCCAAGTTTATAGTTGGATCAAAAGAGGCTGACTTGGAACAATCTGCAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000049 GO:0001510 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0008168 GO:0008173 GO:0008175 GO:0008757 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016427 GO:0016428 GO:0016740 GO:0016741 GO:0030488 GO:0032259 GO:0034470 GO:0034641 GO:0034660 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:0140101 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltr_RsmB-F PUA

Protein Analysis

566

Amino Acids

62.18

Weight (kDa)

7.08

Isoelectric Point (pI)

38.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUA	PF01472	115 - 152	3.7e-06	PUA domain
Methyltr_RsmB-F	PF01189	245 - 314	7.5e-16	16S rRNA methyltransferase RsmB/F
Methyltr_RsmB-F	PF01189	409 - 497	2.5e-19	16S rRNA methyltransferase RsmB/F

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013335)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06560
fragaria_vesca	FvH4_6g38630 FvH4_6g38630
malus_domestica	MD09G1148800.v1.1 MD17G1135100.v1.1
prunus_persica	Prupe.3G177300_v2.0.a1 Prupe.3G177300_v2.0.a1
pyrus_communis	pycom09g06840 pycom17g12920
rosa_chinensis	RchiOBHm_Chr2g0152091
rosa_laevigata	RLG00000020607
rosa_multiflora	Rmu_co8372479.1_g000001 Rmu_sc0000760.1_g000014
rosa_roxburghii	Rroxscaffold_2G00095940
rosa_rugosa	Rorug02G0430900 Rorug02G0431000
rosa_samantha	Rh2DG515100
rosa_wichuraiana	Rw2G040410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	386
AccBSI	CCGCTC	2 cut(s)	564, 1621
AccII	CGCG	1 cut(s)	133
AciI	CCGC	7 cut(s)	99, 133, 374, 452, 564, 843, 1619
AclWI	GGATC	6 cut(s)	512, 536, 737, 750, 1601, 1669
AcoI	YGGCCR	3 cut(s)	134, 577, 1531
AcsI	RAATTY	3 cut(s)	1131, 1478, 1541
AcuI	CTGAAG	1 cut(s)	645
AfaI	GTAC	4 cut(s)	260, 411, 867, 1423
AfiI	CCNNNNNNNGG	5 cut(s)	132, 752, 1071, 1489, 1511
AflII	CTTAAG	1 cut(s)	338
AflIII	ACRYGT	2 cut(s)	771, 1418
AgsI	TTSAA	9 cut(s)	172, 557, 707, 1016, 1033, 1055, 1078, 1416, 1541
AjnI	CCWGG	5 cut(s)	403, 784, 1186, 1519, 1576
AluBI	AGCT	5 cut(s)	941, 1148, 1248, 1384, 1448
AluI	AGCT	5 cut(s)	941, 1148, 1248, 1384, 1448
Alw21I	GWGCWC	2 cut(s)	427, 622
Alw26I	GTCTC	2 cut(s)	530, 1620
AlwI	GGATC	6 cut(s)	512, 536, 737, 750, 1601, 1669
Ama87I	CYCGRG	1 cut(s)	62
AoxI	GGCC	4 cut(s)	134, 577, 898, 1531
ApeKI	GCWGC	4 cut(s)	472, 779, 887, 984
ApoI	RAATTY	3 cut(s)	1131, 1478, 1541
Asp700I	GAANNNNTTC	2 cut(s)	699, 1593
AspLEI	GCGC	1 cut(s)	762
AspS9I	GGNCC	5 cut(s)	95, 284, 898, 1184, 1517
AsuC2I	CCSGG	4 cut(s)	249, 477, 1395, 1434
AsuHPI	GGTGA	1 cut(s)	767
AvaI	CYCGRG	1 cut(s)	62
AvaII	GGWCC	4 cut(s)	95, 284, 1184, 1517
BamHI	GGATCC	1 cut(s)	742
BanI	GGYRCC	1 cut(s)	386
BanII	GRGCYC	1 cut(s)	281
Bbv12I	GWGCWC	2 cut(s)	427, 622
BbvCI	CCTCAGC	2 cut(s)	369, 483
BbvI	GCAGC	4 cut(s)	484, 766, 874, 971
BccI	CCATC	3 cut(s)	486, 1544, 1618
BceAI	ACGGC	2 cut(s)	121, 1518
BciT130I	CCWGG	5 cut(s)	405, 786, 1188, 1521, 1578
BciVI	GTATCC	1 cut(s)	1462
BclI	TGATCA	1 cut(s)	1369
BcnI	CCSGG	4 cut(s)	249, 477, 1395, 1434
BcoDI	GTCTC	2 cut(s)	530, 1620
BfaI	CTAG	5 cut(s)	510, 767, 1265, 1385, 1526
BfrI	CTTAAG	1 cut(s)	338
BfuI	GTATCC	1 cut(s)	1462
BglII	AGATCT	1 cut(s)	851
BisI	GCNGC	6 cut(s)	134, 473, 780, 843, 888, 985
BlsI	GCNGC	6 cut(s)	135, 474, 781, 844, 889, 986
BmcAI	AGTACT	1 cut(s)	260
Bme1390I	CCNGG	9 cut(s)	249, 405, 477, 786, 1188, 1395, 1434, 1521, 1578
Bme18I	GGWCC	4 cut(s)	95, 284, 1184, 1517
BmeT110I	CYCGRG	1 cut(s)	62
BmgT120I	GGNCC	5 cut(s)	95, 284, 898, 1184, 1517
BmiI	GGNNCC	4 cut(s)	97, 388, 744, 1021
BmrFI	CCNGG	9 cut(s)	249, 405, 477, 786, 1188, 1395, 1434, 1521, 1578
BmsI	GCATC	5 cut(s)	123, 340, 919, 1258, 1502
BpmI	CTGGAG	2 cut(s)	807, 1332
Bpu10I	CCTNAGC	3 cut(s)	280, 369, 483
BpuEI	CTTGAG	2 cut(s)	707, 1354
BpuMI	CCSGG	4 cut(s)	249, 477, 1395, 1434
BsaBI	GATNNNNATC	1 cut(s)	546
BsaJI	CCNNGG	5 cut(s)	63, 390, 580, 1285, 1488
BsaXI	ACNNNNNCTCC	2 cut(s)	1392, 1422
Bsc4I	CCNNNNNNNGG	5 cut(s)	132, 752, 1071, 1489, 1511
Bse1I	ACTGG	2 cut(s)	417, 873
Bse3DI	GCAATG	1 cut(s)	979
Bse8I	GATNNNNATC	1 cut(s)	546
BseBI	CCWGG	5 cut(s)	405, 786, 1188, 1521, 1578
BseDI	CCNNGG	5 cut(s)	63, 390, 580, 1285, 1488
BseGI	GGATG	4 cut(s)	331, 448, 497, 829
BseJI	GATNNNNATC	1 cut(s)	546
BseLI	CCNNNNNNNGG	5 cut(s)	132, 752, 1071, 1489, 1511
BseMI	GCAATG	1 cut(s)	979
BseMII	CTCAG	8 cut(s)	294, 306, 360, 474, 525, 981, 1209, 1551
BseNI	ACTGG	2 cut(s)	417, 873
BseRI	GAGGAG	1 cut(s)	1577
BseX3I	CGGCCG	1 cut(s)	134
BseXI	GCAGC	4 cut(s)	484, 766, 874, 971
BsgI	GTGCAG	2 cut(s)	765, 970
Bsh1236I	CGCG	1 cut(s)	133
Bsh1285I	CGRYCG	2 cut(s)	137, 1632
BshFI	GGCC	4 cut(s)	136, 579, 900, 1533
BshNI	GGYRCC	1 cut(s)	386
BsiEI	CGRYCG	2 cut(s)	137, 1632
BsiHKAI	GWGCWC	2 cut(s)	427, 622
BsiHKCI	CYCGRG	1 cut(s)	62
BsiSI	CCGG	5 cut(s)	248, 358, 477, 1394, 1434
BslFI	GGGAC	1 cut(s)	529
BslI	CCNNNNNNNGG	5 cut(s)	132, 752, 1071, 1489, 1511
BsmAI	GTCTC	2 cut(s)	530, 1620
BsmBI	CGTCTC	1 cut(s)	1620
BsmFI	GGGAC	1 cut(s)	529
BsmI	GAATGC	1 cut(s)	1084
BsnI	GGCC	4 cut(s)	136, 579, 900, 1533
BsoBI	CYCGRG	1 cut(s)	62
Bsp1286I	GDGCHC	3 cut(s)	281, 427, 622
Bsp1407I	TGTACA	1 cut(s)	1421
BspACI	CCGC	7 cut(s)	99, 133, 374, 452, 564, 843, 1619
BspANI	GGCC	4 cut(s)	136, 579, 900, 1533
BspCNI	CTCAG	8 cut(s)	293, 305, 361, 475, 526, 982, 1210, 1552
BspFNI	CGCG	1 cut(s)	133
BspLI	GGNNCC	4 cut(s)	97, 388, 744, 1021
BspPI	GGATC	6 cut(s)	512, 536, 737, 750, 1601, 1669
BspT107I	GGYRCC	1 cut(s)	386
BspTI	CTTAAG	1 cut(s)	338
BsrBI	CCGCTC	2 cut(s)	564, 1621
BsrDI	GCAATG	1 cut(s)	979
BsrGI	TGTACA	1 cut(s)	1421
BsrI	ACTGG	2 cut(s)	417, 873
BssECI	CCNNGG	5 cut(s)	63, 390, 580, 1285, 1488
BssT1I	CCWWGG	2 cut(s)	1285, 1488
Bst2UI	CCWGG	5 cut(s)	405, 786, 1188, 1521, 1578
Bst4CI	ACNGT	2 cut(s)	35, 1324
BstAFI	CTTAAG	1 cut(s)	338
BstAUI	TGTACA	1 cut(s)	1421
BstC8I	GCNNGC	4 cut(s)	418, 566, 683, 1344
BstENI	CCTNNNNNAGG	1 cut(s)	750
BstF5I	GGATG	4 cut(s)	331, 448, 497, 829
BstFNI	CGCG	1 cut(s)	133
BstHHI	GCGC	1 cut(s)	762
BstMAI	GTCTC	2 cut(s)	530, 1620
BstMCI	CGRYCG	2 cut(s)	137, 1632
BstMWI	GCNNNNNNNGC	2 cut(s)	422, 938
BstNI	CCWGG	5 cut(s)	405, 786, 1188, 1521, 1578
BstNSI	RCATGY	3 cut(s)	775, 1346, 1422
BstSCI	CCNGG	9 cut(s)	247, 403, 475, 784, 1186, 1393, 1432, 1519, 1576
BstUI	CGCG	1 cut(s)	133
BstV1I	GCAGC	4 cut(s)	484, 766, 874, 971
BstX2I	RGATCY	3 cut(s)	541, 742, 851
BstYI	RGATCY	3 cut(s)	541, 742, 851
BstZI	CGGCCG	1 cut(s)	134
BsuI	GTATCC	1 cut(s)	1462
BsuRI	GGCC	4 cut(s)	136, 579, 900, 1533
BtsCI	GGATG	4 cut(s)	331, 448, 497, 829
BtsI	GCAGTG	2 cut(s)	427, 726
BtsIMutI	CAGTG	5 cut(s)	427, 652, 726, 987, 1205
Cac8I	GCNNGC	4 cut(s)	418, 566, 683, 1344
CfoI	GCGC	1 cut(s)	762
Cfr13I	GGNCC	5 cut(s)	95, 284, 898, 1184, 1517
CsiI	ACCWGGT	2 cut(s)	1519, 1576
Csp6I	GTAC	4 cut(s)	259, 410, 866, 1422
CviAII	CATG	5 cut(s)	428, 734, 772, 1343, 1419
CviQI	GTAC	4 cut(s)	259, 410, 866, 1422
EaeI	YGGCCR	3 cut(s)	134, 577, 1531
EagI	CGGCCG	1 cut(s)	134
EclXI	CGGCCG	1 cut(s)	134
Eco130I	CCWWGG	2 cut(s)	1285, 1488
Eco24I	GRGCYC	1 cut(s)	281
Eco47I	GGWCC	4 cut(s)	95, 284, 1184, 1517
Eco52I	CGGCCG	1 cut(s)	134
Eco57I	CTGAAG	1 cut(s)	645
Eco88I	CYCGRG	1 cut(s)	62
EcoNI	CCTNNNNNAGG	1 cut(s)	750
EcoO109I	RGGNCCY	2 cut(s)	284, 1517
EcoRI	GAATTC	1 cut(s)	1541
EcoRII	CCWGG	5 cut(s)	403, 784, 1186, 1519, 1576
EcoT14I	CCWWGG	2 cut(s)	1285, 1488
EcoT38I	GRGCYC	1 cut(s)	281
ErhI	CCWWGG	2 cut(s)	1285, 1488
Esp3I	CGTCTC	1 cut(s)	1620
FaeI	CATG	5 cut(s)	431, 737, 775, 1346, 1422
FaqI	GGGAC	1 cut(s)	529
FatI	CATG	5 cut(s)	427, 733, 771, 1342, 1418
FauI	CCCGC	2 cut(s)	106, 557
FbaI	TGATCA	1 cut(s)	1369
Fnu4HI	GCNGC	6 cut(s)	134, 473, 780, 843, 888, 985
FokI	GGATG	4 cut(s)	318, 455, 504, 836
FriOI	GRGCYC	1 cut(s)	281
Fsp4HI	GCNGC	6 cut(s)	134, 473, 780, 843, 888, 985
FspBI	CTAG	5 cut(s)	510, 767, 1265, 1385, 1526
GlaI	GCGC	1 cut(s)	761
GluI	GCNGC	6 cut(s)	134, 473, 780, 843, 888, 985
GsuI	CTGGAG	2 cut(s)	807, 1332
HaeIII	GGCC	4 cut(s)	136, 579, 900, 1533
HapII	CCGG	5 cut(s)	248, 358, 477, 1394, 1434
HhaI	GCGC	1 cut(s)	762
Hin1II	CATG	5 cut(s)	431, 737, 775, 1346, 1422
Hin6I	GCGC	1 cut(s)	760
HinP1I	GCGC	1 cut(s)	760
HinfI	GANTC	6 cut(s)	58, 71, 185, 211, 959, 1328
HpaII	CCGG	5 cut(s)	248, 358, 477, 1394, 1434
HphI	GGTGA	1 cut(s)	767
Hpy166II	GTNNAC	3 cut(s)	163, 177, 410
Hpy188I	TCNGA	6 cut(s)	216, 879, 936, 964, 1039, 1599
Hpy188III	TCNNGA	7 cut(s)	62, 196, 623, 740, 1156, 1265, 1583
Hpy8I	GTNNAC	3 cut(s)	163, 177, 410
HpyAV	CCTTC	8 cut(s)	268, 430, 620, 678, 814, 821, 1153, 1164
HpyCH4III	ACNGT	2 cut(s)	35, 1324
HpyCH4V	TGCA	9 cut(s)	420, 526, 782, 803, 809, 921, 987, 1346, 1691
HpyF10VI	GCNNNNNNNGC	2 cut(s)	422, 938
Hsp92II	CATG	5 cut(s)	431, 737, 775, 1346, 1422
HspAI	GCGC	1 cut(s)	760
Ksp22I	TGATCA	1 cut(s)	1369
LmnI	GCTCC	4 cut(s)	561, 625, 1243, 1276
Lsp1109I	GCAGC	4 cut(s)	484, 766, 874, 971
LweI	GCATC	5 cut(s)	123, 340, 919, 1258, 1502
MabI	ACCWGGT	2 cut(s)	1519, 1576
MaeI	CTAG	5 cut(s)	510, 767, 1265, 1385, 1526
MaeIII	GTNAC	6 cut(s)	29, 35, 647, 724, 1006, 1105
MbiI	CCGCTC	2 cut(s)	564, 1621
MboII	GAAGA	5 cut(s)	371, 695, 1203, 1253, 1598
MfeI	CAATTG	1 cut(s)	804
MflI	RGATCY	3 cut(s)	541, 742, 851
MhlI	GDGCHC	3 cut(s)	281, 427, 622
MlyI	GAGTC	1 cut(s)	179
MmeI	TCCRAC	4 cut(s)	35, 108, 1047, 1639
MroXI	GAANNNNTTC	2 cut(s)	699, 1593
MseI	TTAA	3 cut(s)	339, 1095, 1292
MspA1I	CMGCKG	1 cut(s)	845
MspCI	CTTAAG	1 cut(s)	338
MspI	CCGG	5 cut(s)	248, 358, 477, 1394, 1434
MspR9I	CCNGG	9 cut(s)	249, 405, 477, 786, 1188, 1395, 1434, 1521, 1578
MunI	CAATTG	1 cut(s)	804
Mva1269I	GAATGC	1 cut(s)	1084
MvaI	CCWGG	5 cut(s)	405, 786, 1188, 1521, 1578
MvnI	CGCG	1 cut(s)	133
MwoI	GCNNNNNNNGC	2 cut(s)	422, 938
NciI	CCSGG	4 cut(s)	249, 477, 1395, 1434
NlaIII	CATG	5 cut(s)	431, 737, 775, 1346, 1422
NlaIV	GGNNCC	4 cut(s)	97, 388, 744, 1021
NmeAIII	GCCGAG	2 cut(s)	415, 605
NmuCI	GTSAC	2 cut(s)	647, 724
NspI	RCATGY	3 cut(s)	775, 1346, 1422
PaeI	GCATGC	1 cut(s)	1346
PciI	ACATGT	2 cut(s)	771, 1418
PctI	GAATGC	1 cut(s)	1084
PdmI	GAANNNNTTC	2 cut(s)	699, 1593
PfeI	GAWTC	5 cut(s)	58, 71, 211, 959, 1328
PflFI	GACNNNGTC	2 cut(s)	1521, 1578
PfoI	TCCNGGA	2 cut(s)	1186, 1432
PkrI	GCNGC	6 cut(s)	135, 474, 781, 844, 889, 986
Ple19I	CGATCG	1 cut(s)	1632
PleI	GAGTC	1 cut(s)	179
PpsI	GAGTC	1 cut(s)	179
PpuMI	RGGWCCY	2 cut(s)	284, 1517
PscI	ACATGT	2 cut(s)	771, 1418
Psp5II	RGGWCCY	2 cut(s)	284, 1517
Psp6I	CCWGG	5 cut(s)	403, 784, 1186, 1519, 1576
PspGI	CCWGG	5 cut(s)	403, 784, 1186, 1519, 1576
PspN4I	GGNNCC	4 cut(s)	97, 388, 744, 1021
PspPI	GGNCC	5 cut(s)	95, 284, 898, 1184, 1517
PspPPI	RGGWCCY	2 cut(s)	284, 1517
PsuI	RGATCY	3 cut(s)	541, 742, 851
PsyI	GACNNNGTC	2 cut(s)	1521, 1578
PvuI	CGATCG	1 cut(s)	1632
RsaI	GTAC	4 cut(s)	260, 411, 867, 1423
RsaNI	GTAC	4 cut(s)	259, 410, 866, 1422
SaqAI	TTAA	3 cut(s)	339, 1095, 1292
SatI	GCNGC	6 cut(s)	134, 473, 780, 843, 888, 985
Sau96I	GGNCC	5 cut(s)	95, 284, 898, 1184, 1517
ScaI	AGTACT	1 cut(s)	260
SchI	GAGTC	1 cut(s)	179
ScrFI	CCNGG	9 cut(s)	249, 405, 477, 786, 1188, 1395, 1434, 1521, 1578
SduI	GDGCHC	3 cut(s)	281, 427, 622
SexAI	ACCWGGT	2 cut(s)	1519, 1576
SfaNI	GCATC	5 cut(s)	123, 340, 919, 1258, 1502
SinI	GGWCC	4 cut(s)	95, 284, 1184, 1517
SmlI	CTYRAG	3 cut(s)	338, 686, 1333
SmoI	CTYRAG	3 cut(s)	338, 686, 1333
SphI	GCATGC	1 cut(s)	1346
SsiI	CCGC	7 cut(s)	99, 133, 374, 452, 564, 843, 1619
SspI	AATATT	1 cut(s)	699
SspMI	CTAG	5 cut(s)	510, 767, 1265, 1385, 1526
StyD4I	CCNGG	9 cut(s)	247, 403, 475, 784, 1186, 1393, 1432, 1519, 1576
StyI	CCWWGG	2 cut(s)	1285, 1488
TaaI	ACNGT	2 cut(s)	35, 1324
TaqI	TCGA	7 cut(s)	69, 195, 1300, 1326, 1456, 1605, 1623
TatI	WGTACW	3 cut(s)	258, 409, 1421
TauI	GCSGC	2 cut(s)	136, 845
TfiI	GAWTC	5 cut(s)	58, 71, 211, 959, 1328
Tru1I	TTAA	3 cut(s)	339, 1095, 1292
Tru9I	TTAA	3 cut(s)	339, 1095, 1292
TscAI	CASTG	5 cut(s)	427, 652, 733, 994, 1205
TseFI	GTSAC	2 cut(s)	647, 724
TseI	GCWGC	4 cut(s)	472, 779, 887, 984
Tsp45I	GTSAC	2 cut(s)	647, 724
TspDTI	ATGAA	6 cut(s)	833, 840, 972, 1128, 1458, 1630
TspGWI	ACGGA	2 cut(s)	178, 1192
TspRI	CASTG	5 cut(s)	427, 652, 733, 994, 1205
Tth111I	GACNNNGTC	2 cut(s)	1521, 1578
Vha464I	CTTAAG	1 cut(s)	338
VpaK11BI	GGWCC	4 cut(s)	95, 284, 1184, 1517
XagI	CCTNNNNNAGG	1 cut(s)	750
XapI	RAATTY	3 cut(s)	1131, 1478, 1541
XbaI	TCTAGA	1 cut(s)	1264
XceI	RCATGY	3 cut(s)	775, 1346, 1422
XcmI	CCANNNNNNNNNTGG	1 cut(s)	51
XmnI	GAANNNNTTC	2 cut(s)	699, 1593
XspI	CTAG	5 cut(s)	510, 767, 1265, 1385, 1526
ZrmI	AGTACT	1 cut(s)	260

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.