AT1G10750

BEST Arabidopsis thaliana protein match is Protein of

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0006525
Physical Location & Seq
Reverse (-)
3574807 .. 3578783
3977 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10750.2

Sequence Viewer

Length: 1404 bp
ATGGGAGGTGTGTTCGTGTTGAGGAAACCCAGAAACGGCAATAAATGCCGTCGTTTCGATCGATGCATTACAATGAGACAAACGGAAACAGAGTTGTTCTCAGAAGAAACAAGAATGAGAACAAGAGAAACAAGACGAAGAAGAAGAAGCTTCTTCTTAGATATGATCCTTCTGTTTCGTACTTGTTCCTCCAACATTCTTTTCCTCTCTCTTCTTCTCTTGTCTTCTTCTTTTTCCTCTGTCTTGTCCGAGAATCTCTCACCTAGAAACCAAACTCTCAGGCCACTCGATGAGCTTAATAAGCTCAAAGCCATTAATCAACATCTCAGGAAGATCAATAAACCTTCAATTAAGACAATTCATAGCCCCGATGGAGACATCATAGACTGTGTTTTATTACATCACCAACCAGCATTTGATCATCCCAGCTTAAGAGGACAGAAGCCACTGGATCCTCCAGAGAGGCCAAGAGGGCATAACAGGAGAGGATTGAGACCGAAGAGCTTCCAGTTATGGGGAATGGAGGGGGAGACATGTCCTGAGGGAACAGTCCCTATCAGAAGAACAAAAGAAGAAGACATTCTCAGAGCAAACTCTGTTTCTAGCTTTGGCAAGAAACTCAGACATTACAGAAGAGACACTAGCAGTAATGGGCATGAACACGCGGTGGGATACGTGAGCGGAGAGAAATACTATGGTGCTAAAGCAAGCATCAATGTTTGGGCTCCACAAGTTCAGAACCAATACGAATTTAGTTTATCTCAGATTTGGATTATCTCTGGTTCCTTTGGCAATGATCTCAACACCATTGAAGCTGGTTGGCAGGTGAGTCCAGAGCTCTATGGAGATAATTACCCAAGATTCTTTACTTACTGGACTAACGATGCATATCAAGCAACAGGTTGCTACAATCTCTTGTGTTCCGGTTTTGTCCAAACCAATAGTGAGATTGCGATTGGAGCTGCCATCTCTCCCTCGTCTTCATACAAGGGTGGACAATTCGATATTACTCTGCTTATTTGGAAGGATCCGAAGCATGGGAATTGGTGGCTGGAATTCGGGTCGGGTATTCTAGTCGGGTATTGGCCATCGTTCTTGTTCACACACCTGAAGGAGCACGCAAGCATGGTCCAATACGGTGGCGAAATCGTAAATTCGAGTCCTTTTGGAGCCCATACTTCAACACAGATGGGAAGTGGGCATTTTGCAGAGGAAGGGTTTACAAAATCTTCTTATTTCAGAAACATCCAAGTAGTTGATTGGGATAACAATTTGGTCCCTTCTCCTAATCTTCGAGTACTTGCGGATCATCCGAATTGTTACGATATTCAAGGTGGGTCTAATAGGGCTTGGGGGAGTTATTTTTATTACGGAGGACCAGGGAAAAATCCTAAATGCCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Neprosin Neprosin_AP

Protein Analysis

467

Amino Acids

53.13

Weight (kDa)

9.21

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neprosin_AP PF14365 119 - 225 1.4e-37 Neprosin activation peptide
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 814
Acc36I ACCTGC 1 cut(s) 814
AccBSI CCGCTC 1 cut(s) 681
AccII CGCG 1 cut(s) 665
AciI CCGC 3 cut(s) 665, 681, 1304
AclWI GGATC 6 cut(s) 160, 446, 459, 1022, 1035, 1314
AcoI YGGCCR 1 cut(s) 1085
AcsI RAATTY 3 cut(s) 749, 1055, 1153
AcuI CTGAAG 1 cut(s) 1130
AdeI CACNNNGTG 1 cut(s) 667
AfaI GTAC 2 cut(s) 181, 1299
AfiI CCNNNNNNNGG 3 cut(s) 35, 514, 1037
AflII CTTAAG 1 cut(s) 430
AflIII ACRYGT 1 cut(s) 533
AgsI TTSAA 4 cut(s) 348, 812, 1182, 1331
AjnI CCWGG 1 cut(s) 1378
AjuI GAANNNNNNNTTGG 2 cut(s) 185, 217
AluBI AGCT 9 cut(s) 150, 295, 304, 429, 504, 606, 815, 838, 962
AluI AGCT 9 cut(s) 150, 295, 304, 429, 504, 606, 815, 838, 962
Alw21I GWGCWC 2 cut(s) 840, 1119
Alw26I GTCTC 5 cut(s) 70, 369, 487, 524, 630
AlwI GGATC 6 cut(s) 160, 446, 459, 1022, 1035, 1314
AoxI GGCC 3 cut(s) 281, 464, 1085
ApeKI GCWGC 1 cut(s) 962
ApoI RAATTY 3 cut(s) 749, 1055, 1153
AseI ATTAAT 1 cut(s) 315
Asp700I GAANNNNTTC 2 cut(s) 503, 579
AspS9I GGNCC 3 cut(s) 1129, 1276, 1376
AsuHPI GGTGA 3 cut(s) 252, 395, 838
AvaII GGWCC 3 cut(s) 1129, 1276, 1376
AxyI CCTNAGG 1 cut(s) 540
BalI TGGCCA 1 cut(s) 1087
BamHI GGATCC 2 cut(s) 451, 1027
BanII GRGCYC 3 cut(s) 727, 840, 1174
BbsI GAAGAC 3 cut(s) 216, 582, 972
Bbv12I GWGCWC 2 cut(s) 840, 1119
BbvI GCAGC 1 cut(s) 949
BccI CCATC 4 cut(s) 365, 974, 1096, 1183
BceAI ACGGC 2 cut(s) 33, 52
BciT130I CCWGG 1 cut(s) 1380
BciVI GTATCC 1 cut(s) 665
BclI TGATCA 1 cut(s) 418
BcoDI GTCTC 5 cut(s) 70, 369, 487, 524, 630
BfaI CTAG 4 cut(s) 264, 603, 642, 1073
BfrI CTTAAG 1 cut(s) 430
BfuAI ACCTGC 1 cut(s) 814
BfuI GTATCC 1 cut(s) 665
BglI GCCNNNNNGGC 1 cut(s) 472
BisI GCNGC 1 cut(s) 963
BlsI GCNGC 1 cut(s) 964
BmcAI AGTACT 1 cut(s) 1299
Bme1390I CCNGG 1 cut(s) 1380
Bme18I GGWCC 3 cut(s) 1129, 1276, 1376
BmgT120I GGNCC 3 cut(s) 1129, 1276, 1376
BmiI GGNNCC 6 cut(s) 453, 726, 784, 1029, 1171, 1278
BmrFI CCNGG 1 cut(s) 1380
BmsI GCATC 3 cut(s) 53, 720, 874
BpiI GAAGAC 3 cut(s) 216, 582, 972
BplI GAGNNNNNCTC 4 cut(s) 83, 115, 242, 274
BpmI CTGGAG 1 cut(s) 441
Bsa29I ATCGAT 1 cut(s) 61
BsaAI YACGTR 1 cut(s) 676
BsaBI GATNNNNATC 1 cut(s) 888
BsaI GGTCTC 1 cut(s) 487
BsaJI CCNNGG 1 cut(s) 1379
BsaWI WCCGGW 1 cut(s) 923
Bsc4I CCNNNNNNNGG 3 cut(s) 35, 514, 1037
Bse1I ACTGG 3 cut(s) 453, 508, 878
Bse21I CCTNAGG 1 cut(s) 540
Bse3DI GCAATG 1 cut(s) 799
Bse8I GATNNNNATC 1 cut(s) 888
BseBI CCWGG 1 cut(s) 1380
BseCI ATCGAT 1 cut(s) 61
BseDI CCNNGG 1 cut(s) 1379
BseGI GGATG 3 cut(s) 421, 1245, 1309
BseJI GATNNNNATC 1 cut(s) 888
BseLI CCNNNNNNNGG 3 cut(s) 35, 514, 1037
BseMI GCAATG 1 cut(s) 799
BseMII CTCAG 7 cut(s) 114, 292, 340, 531, 598, 634, 776
BseNI ACTGG 3 cut(s) 453, 508, 878
BseXI GCAGC 1 cut(s) 949
BseYI CCCAGC 1 cut(s) 425
Bsh1236I CGCG 1 cut(s) 665
Bsh1285I CGRYCG 1 cut(s) 61
BshFI GGCC 3 cut(s) 283, 466, 1087
BshVI ATCGAT 1 cut(s) 61
BsiEI CGRYCG 1 cut(s) 61
BsiHKAI GWGCWC 2 cut(s) 840, 1119
BsiSI CCGG 1 cut(s) 924
BslFI GGGAC 2 cut(s) 536, 1262
BslI CCNNNNNNNGG 3 cut(s) 35, 514, 1037
BsmAI GTCTC 5 cut(s) 70, 369, 487, 524, 630
BsmFI GGGAC 2 cut(s) 536, 1262
BsnI GGCC 3 cut(s) 283, 466, 1087
Bso31I GGTCTC 1 cut(s) 487
Bsp1286I GDGCHC 4 cut(s) 727, 840, 1119, 1174
Bsp143I GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
BspACI CCGC 3 cut(s) 665, 681, 1304
BspANI GGCC 3 cut(s) 283, 466, 1087
BspCNI CTCAG 7 cut(s) 113, 291, 339, 532, 597, 633, 775
BspDI ATCGAT 1 cut(s) 61
BspFNI CGCG 1 cut(s) 665
BspLI GGNNCC 6 cut(s) 453, 726, 784, 1029, 1171, 1278
BspMI ACCTGC 1 cut(s) 814
BspPI GGATC 6 cut(s) 160, 446, 459, 1022, 1035, 1314
BspQI GCTCTTC 1 cut(s) 494
BspTI CTTAAG 1 cut(s) 430
BspTNI GGTCTC 1 cut(s) 487
BsrBI CCGCTC 1 cut(s) 681
BsrDI GCAATG 1 cut(s) 799
BsrI ACTGG 3 cut(s) 453, 508, 878
BssECI CCNNGG 1 cut(s) 1379
BssMI GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
Bst2UI CCWGG 1 cut(s) 1380
Bst4CI ACNGT 3 cut(s) 389, 550, 1139
Bst6I CTCTTC 3 cut(s) 216, 494, 628
BstAFI CTTAAG 1 cut(s) 430
BstAPI GCANNNNNTGC 1 cut(s) 45
BstBAI YACGTR 1 cut(s) 676
BstC8I GCNNGC 3 cut(s) 709, 1119, 1123
BstDEI CTNAG 8 cut(s) 100, 157, 278, 326, 540, 584, 620, 762
BstF5I GGATG 3 cut(s) 421, 1245, 1309
BstFNI CGCG 1 cut(s) 665
BstKTI GATC 8 cut(s) 61, 168, 336, 421, 454, 799, 1030, 1309
BstMAI GTCTC 5 cut(s) 70, 369, 487, 524, 630
BstMBI GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
BstMCI CGRYCG 1 cut(s) 61
BstMWI GCNNNNNNNGC 5 cut(s) 45, 301, 472, 893, 959
BstNI CCWGG 1 cut(s) 1380
BstNSI RCATGY 1 cut(s) 537
BstSCI CCNGG 1 cut(s) 1378
BstUI CGCG 1 cut(s) 665
BstV1I GCAGC 1 cut(s) 949
BstV2I GAAGAC 3 cut(s) 216, 582, 972
BstX2I RGATCY 2 cut(s) 451, 1027
BstXI CCANNNNNNTGG 1 cut(s) 1139
BstYI RGATCY 2 cut(s) 451, 1027
Bsu15I ATCGAT 1 cut(s) 61
Bsu36I CCTNAGG 1 cut(s) 540
BsuI GTATCC 1 cut(s) 665
BsuRI GGCC 3 cut(s) 283, 466, 1087
BsuTUI ATCGAT 1 cut(s) 61
BtsCI GGATG 3 cut(s) 421, 1245, 1309
BtsIMutI CAGTG 1 cut(s) 446
BveI ACCTGC 1 cut(s) 814
Cac8I GCNNGC 3 cut(s) 709, 1119, 1123
Cfr13I GGNCC 3 cut(s) 1129, 1276, 1376
ClaI ATCGAT 1 cut(s) 61
Csp6I GTAC 2 cut(s) 180, 1298
CviAII CATG 4 cut(s) 534, 656, 1037, 1126
CviQI GTAC 2 cut(s) 180, 1298
DdeI CTNAG 8 cut(s) 100, 157, 278, 326, 540, 584, 620, 762
DpnI GATC 8 cut(s) 60, 167, 335, 420, 453, 798, 1029, 1308
DpnII GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
DraIII CACNNNGTG 1 cut(s) 667
EaeI YGGCCR 1 cut(s) 1085
Eam1104I CTCTTC 3 cut(s) 216, 494, 628
EarI CTCTTC 3 cut(s) 216, 494, 628
Ecl136II GAGCTC 1 cut(s) 838
Eco24I GRGCYC 3 cut(s) 727, 840, 1174
Eco31I GGTCTC 1 cut(s) 487
Eco47I GGWCC 3 cut(s) 1129, 1276, 1376
Eco53kI GAGCTC 1 cut(s) 838
Eco57I CTGAAG 1 cut(s) 1130
Eco81I CCTNAGG 1 cut(s) 540
EcoICRI GAGCTC 1 cut(s) 838
EcoRI GAATTC 1 cut(s) 1055
EcoRII CCWGG 1 cut(s) 1378
EcoT22I ATGCAT 2 cut(s) 68, 889
EcoT38I GRGCYC 3 cut(s) 727, 840, 1174
FaeI CATG 4 cut(s) 537, 659, 1040, 1129
FaqI GGGAC 2 cut(s) 536, 1262
FatI CATG 4 cut(s) 533, 655, 1036, 1125
FbaI TGATCA 1 cut(s) 418
Fnu4HI GCNGC 1 cut(s) 963
FokI GGATG 3 cut(s) 408, 1232, 1296
FriOI GRGCYC 3 cut(s) 727, 840, 1174
Fsp4HI GCNGC 1 cut(s) 963
FspBI CTAG 4 cut(s) 264, 603, 642, 1073
GluI GCNGC 1 cut(s) 963
GsaI CCCAGC 1 cut(s) 429
GsuI CTGGAG 1 cut(s) 441
HaeIII GGCC 3 cut(s) 283, 466, 1087
HapII CCGG 1 cut(s) 924
Hin1II CATG 4 cut(s) 537, 659, 1040, 1129
HindIII AAGCTT 1 cut(s) 148
HinfI GANTC 4 cut(s) 253, 829, 861, 1159
HpaII CCGG 1 cut(s) 924
HphI GGTGA 3 cut(s) 252, 395, 838
Hpy166II GTNNAC 3 cut(s) 995, 1101, 1221
Hpy188III TCNNGA 4 cut(s) 328, 458, 539, 833
Hpy8I GTNNAC 3 cut(s) 995, 1101, 1221
Hpy99I CGWCG 1 cut(s) 54
HpyAV CCTTC 6 cut(s) 179, 354, 1018, 1105, 1208, 1290
HpyCH4III ACNGT 3 cut(s) 389, 550, 1139
HpyCH4IV ACGT 1 cut(s) 675
HpyCH4V TGCA 3 cut(s) 66, 887, 1208
HpyF10VI GCNNNNNNNGC 5 cut(s) 45, 301, 472, 893, 959
HpyF3I CTNAG 8 cut(s) 100, 157, 278, 326, 540, 584, 620, 762
HpySE526I ACGT 1 cut(s) 675
Hsp92II CATG 4 cut(s) 537, 659, 1040, 1129
Ksp22I TGATCA 1 cut(s) 418
Kzo9I GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
LguI GCTCTTC 1 cut(s) 494
LmnI GCTCC 4 cut(s) 730, 959, 1114, 1169
Lsp1109I GCAGC 1 cut(s) 949
LweI GCATC 3 cut(s) 53, 720, 874
MaeI CTAG 4 cut(s) 264, 603, 642, 1073
MaeII ACGT 1 cut(s) 675
MaeIII GTNAC 1 cut(s) 1319
MalI GATC 8 cut(s) 60, 167, 335, 420, 453, 798, 1029, 1308
MbiI CCGCTC 1 cut(s) 681
MboI GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
MflI RGATCY 2 cut(s) 451, 1027
MhlI GDGCHC 4 cut(s) 727, 840, 1119, 1174
MlsI TGGCCA 1 cut(s) 1087
MluNI TGGCCA 1 cut(s) 1087
MlyI GAGTC 2 cut(s) 838, 1168
MmeI TCCRAC 1 cut(s) 216
Mox20I TGGCCA 1 cut(s) 1087
Mph1103I ATGCAT 2 cut(s) 68, 889
MroXI GAANNNNTTC 2 cut(s) 503, 579
MscI TGGCCA 1 cut(s) 1087
MseI TTAA 5 cut(s) 297, 315, 351, 431, 1402
MslI CAYNNNNRTG 1 cut(s) 71
Msp20I TGGCCA 1 cut(s) 1087
MspCI CTTAAG 1 cut(s) 430
MspI CCGG 1 cut(s) 924
MspR9I CCNGG 1 cut(s) 1380
MvaI CCWGG 1 cut(s) 1380
MvnI CGCG 1 cut(s) 665
MwoI GCNNNNNNNGC 5 cut(s) 45, 301, 472, 893, 959
NdeII GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
NlaIII CATG 4 cut(s) 537, 659, 1040, 1129
NlaIV GGNNCC 6 cut(s) 453, 726, 784, 1029, 1171, 1278
NsiI ATGCAT 2 cut(s) 68, 889
NspI RCATGY 1 cut(s) 537
PaqCI CACCTGC 1 cut(s) 814
PciI ACATGT 1 cut(s) 533
PciSI GCTCTTC 1 cut(s) 494
PcsI WCGNNNNNNNCGW 1 cut(s) 58
PdmI GAANNNNTTC 2 cut(s) 503, 579
PfeI GAWTC 2 cut(s) 253, 861
PkrI GCNGC 1 cut(s) 964
Ple19I CGATCG 1 cut(s) 61
PleI GAGTC 2 cut(s) 837, 1167
PpsI GAGTC 2 cut(s) 837, 1167
Ppu21I YACGTR 1 cut(s) 676
PscI ACATGT 1 cut(s) 533
PshBI ATTAAT 1 cut(s) 315
Psp124BI GAGCTC 1 cut(s) 840
Psp6I CCWGG 1 cut(s) 1378
PspFI CCCAGC 1 cut(s) 425
PspGI CCWGG 1 cut(s) 1378
PspN4I GGNNCC 6 cut(s) 453, 726, 784, 1029, 1171, 1278
PspPI GGNCC 3 cut(s) 1129, 1276, 1376
PsuI RGATCY 2 cut(s) 451, 1027
PvuI CGATCG 1 cut(s) 61
RsaI GTAC 2 cut(s) 181, 1299
RsaNI GTAC 2 cut(s) 180, 1298
RseI CAYNNNNRTG 1 cut(s) 71
SacI GAGCTC 1 cut(s) 840
SapI GCTCTTC 1 cut(s) 494
SaqAI TTAA 5 cut(s) 297, 315, 351, 431, 1402
SatI GCNGC 1 cut(s) 963
Sau3AI GATC 8 cut(s) 58, 165, 333, 418, 451, 796, 1027, 1306
Sau96I GGNCC 3 cut(s) 1129, 1276, 1376
ScaI AGTACT 1 cut(s) 1299
SchI GAGTC 2 cut(s) 838, 1168
ScrFI CCNGG 1 cut(s) 1380
SduI GDGCHC 4 cut(s) 727, 840, 1119, 1174
SfaNI GCATC 3 cut(s) 53, 720, 874
SinI GGWCC 3 cut(s) 1129, 1276, 1376
SmiMI CAYNNNNRTG 1 cut(s) 71
SmlI CTYRAG 1 cut(s) 430
SmoI CTYRAG 1 cut(s) 430
SsiI CCGC 3 cut(s) 665, 681, 1304
SspMI CTAG 4 cut(s) 264, 603, 642, 1073
SstI GAGCTC 1 cut(s) 840
StyD4I CCNGG 1 cut(s) 1378
TaaI ACNGT 3 cut(s) 389, 550, 1139
TaiI ACGT 1 cut(s) 678
TaqI TCGA 6 cut(s) 57, 61, 288, 1002, 1157, 1294
TaqII GACCGA 1 cut(s) 511
TatI WGTACW 1 cut(s) 1297
TfiI GAWTC 2 cut(s) 253, 861
Tru1I TTAA 5 cut(s) 297, 315, 351, 431, 1402
Tru9I TTAA 5 cut(s) 297, 315, 351, 431, 1402
TscAI CASTG 1 cut(s) 453
TseI GCWGC 1 cut(s) 962
TspDTI ATGAA 3 cut(s) 350, 672, 972
TspGWI ACGGA 2 cut(s) 98, 1386
TspRI CASTG 1 cut(s) 453
Vha464I CTTAAG 1 cut(s) 430
VpaK11BI GGWCC 3 cut(s) 1129, 1276, 1376
VspI ATTAAT 1 cut(s) 315
XapI RAATTY 3 cut(s) 749, 1055, 1153
XceI RCATGY 1 cut(s) 537
XmnI GAANNNNTTC 2 cut(s) 503, 579
XspI CTAG 4 cut(s) 264, 603, 642, 1073
ZrmI AGTACT 1 cut(s) 1299
Zsp2I ATGCAT 2 cut(s) 68, 889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.