Rorug04G0267600

Neprosin

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
43998640 .. 43999474
835 bp
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UTR
Exon/CDS
Intron
Rorug04G0267600.1

Sequence Viewer

Length: 162 bp
ATGGTTGTCTTGCAGTTGGCTGCTCGCTACTGTTTGGTTGGAACGCTAGGATTCTTTAGCTGTTCTTATTCCAATGGCAATGCTAATGTGAATGGAAATGGGAAGGGAGTAAATGGAAATGAAGTGAAGAGAGAAAGCCATCGTGAAGAGCTGCTGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

53

Amino Acids

5.67

Weight (kDa)

7.82

Isoelectric Point (pI)

17.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 2 cut(s) 60, 151
AluI AGCT 2 cut(s) 60, 151
ApeKI GCWGC 2 cut(s) 20, 151
BbvI GCAGC 2 cut(s) 7, 138
BccI CCATC 1 cut(s) 147
BfaI CTAG 1 cut(s) 47
BisI GCNGC 2 cut(s) 21, 152
BlsI GCNGC 2 cut(s) 22, 153
Bse3DI GCAATG 1 cut(s) 85
BseMI GCAATG 1 cut(s) 85
BseXI GCAGC 2 cut(s) 7, 138
BseYI CCCAGC 1 cut(s) 154
BspQI GCTCTTC 1 cut(s) 141
BsrDI GCAATG 1 cut(s) 85
Bst4CI ACNGT 1 cut(s) 32
Bst6I CTCTTC 2 cut(s) 122, 141
BstC8I GCNNGC 1 cut(s) 25
BstV1I GCAGC 2 cut(s) 7, 138
Cac8I GCNNGC 1 cut(s) 25
CviJI RGCY 4 cut(s) 20, 60, 138, 151
CviKI_1 RGCY 4 cut(s) 20, 60, 138, 151
Eam1104I CTCTTC 2 cut(s) 122, 141
EarI CTCTTC 2 cut(s) 122, 141
Fnu4HI GCNGC 2 cut(s) 21, 152
Fsp4HI GCNGC 2 cut(s) 21, 152
FspBI CTAG 1 cut(s) 47
GluI GCNGC 2 cut(s) 21, 152
GsaI CCCAGC 1 cut(s) 158
HinfI GANTC 1 cut(s) 51
Hpy188III TCNNGA 1 cut(s) 143
HpyAV CCTTC 1 cut(s) 97
HpyCH4III ACNGT 1 cut(s) 32
HpyCH4V TGCA 1 cut(s) 13
LguI GCTCTTC 1 cut(s) 141
LpnPI CCDG 1 cut(s) 140
Lsp1109I GCAGC 2 cut(s) 7, 138
MaeI CTAG 1 cut(s) 47
MboII GAAGA 2 cut(s) 139, 158
MmeI TCCRAC 1 cut(s) 19
PciSI GCTCTTC 1 cut(s) 141
PfeI GAWTC 1 cut(s) 51
PkrI GCNGC 2 cut(s) 22, 153
PspFI CCCAGC 1 cut(s) 154
SapI GCTCTTC 1 cut(s) 141
SatI GCNGC 2 cut(s) 21, 152
SetI ASST 2 cut(s) 62, 153
SgeI CNNG 4 cut(s) 22, 36, 59, 155
SspMI CTAG 1 cut(s) 47
TaaI ACNGT 1 cut(s) 32
TfiI GAWTC 1 cut(s) 51
TseI GCWGC 2 cut(s) 20, 151
TspDTI ATGAA 1 cut(s) 135
XspI CTAG 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.