AT1G70550

BEST Arabidopsis thaliana protein match is Protein of

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
26597067 .. 26600445
3379 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G70550.1

Sequence Viewer

Length: 1398 bp
ATGTGTTTAATAGGTTTGTTGGGAGATGTGTCAGTGACATCAAGAAGACGAACAACAATTCAAAACCGTATTAAATGTTGTCTTTTTGATCACTCAAGAAGAAAACAACAAGACAGCAGATGTTTTCATCATTCTTCACAACAAGTTTCGTTCAAGTCTGATCCGATGTTCTCCTCTAGCTTTCTCAGATTGATTCTTTTACTCTGTCTCGTCTCTTCTTCCTTCTCCTCCACCACTTCTTCCTCCAACTCCACTGCCGCCGATCAAACTCTCCGGCCGCAAGAAGAGCTCCAGAAGCTAACACTGATTAGACAAGAACTCGACAAAATCAACAAGCCGGCTGTGAAAACTATTCAGAGCTCAGATGGAGATAAAATAGATTGTGTTTCAACTCATCAGCAACCAGCTTTCGATCATCCTCTCTTACAAGGACAAAAACCATTGGATCCGCCTGAGATACCAAAAGGATACAGCGAAGATGATGGATCATATGAAAACTCCCAGCTTTGGAGTTTATCCGGTGAGTCTTGTCCGGAAGGTACGATTCCGATAAGAAGAACAACGGAACAAGACATGTTAAGAGCAAGTTCTGTCCAAAGATTTGGTCGGAAAATCAGGCGCGTGAAGAGAGATTCCACAAATAACGGACACGAACATGCGGTGGGATATGTAACCGGGAGACAATATTACGGGGCAAAAGCAAGTATTAACGTGTGGTCGCCACGTGTTACGAGCCAATACGAATTTAGTCTTTCTCAGATTTGGGTTATTGCCGGTTCGTTCACACACGATCTTAATACCATTGAAGCCGGTTGGCAAATTAGCCCGGAGTTGTACGGCGATACTTACCCAAGATTCTTTACCTATTGGACGTCCGATGCATATCGAACAACGGGTTGCTACAATTTGCTATGTTCCGGTTTCGTTCAAACCAACCGTCGAATCGCGATAGGAGCTGCGATTTCTCCTAGATCTTCGTATAAAGGTGGACAATTCGATATAAGCTTATTAATTTGGAAGGATCCGAAGCACGGTCACTGGTGGCTACAATTCGGGTCAGGTGCATTAGTCGGTTATTGGCCAGCGTTTTTATTCACGCATCTAAAGCAACATGGAAGCATGGTCCAATTCGGGGGCGAGATTGTGAACAACCGACCCGGCGGTTCACACACTACGACTCAAATGGGTAGTGGACATTTTGCCGGTGAAGGTTTTGGTAAAGCATCTTATTTCCGGAATCTCCAAATTGTTGACTGGGACAACACTCTTATACCCGCTTCGAATCTAAAGATTCTCGCAGACCATCCCAATTGTTATGATATAAGAGGTGGGACGAATCGTGTGTGGGGTAACTATTTTTACTATGGAGGTCCAGGAAAAAACCCTAGATGTCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

465

Amino Acids

52.27

Weight (kDa)

9.07

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neprosin_AP PF14365 117 - 223 2.4e-37 Neprosin activation peptide
Neprosin PF03080 247 - 458 1.3e-85 Neprosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 875
AccII CGCG 2 cut(s) 621, 947
AccIII TCCGGA 2 cut(s) 532, 1233
AciI CCGC 6 cut(s) 258, 278, 449, 659, 1161, 1275
AclWI GGATC 6 cut(s) 155, 440, 453, 493, 1016, 1029
AcoI YGGCCR 2 cut(s) 275, 1079
AcsI RAATTY 1 cut(s) 743
AcvI CACGTG 1 cut(s) 725
AcyI GRCGYC 1 cut(s) 872
AfaI GTAC 2 cut(s) 541, 836
AfiI CCNNNNNNNGG 3 cut(s) 507, 1031, 1132
AflIII ACRYGT 3 cut(s) 573, 711, 724
AgsI TTSAA 5 cut(s) 62, 154, 390, 806, 929
AjnI CCWGG 1 cut(s) 1372
AluBI AGCT 8 cut(s) 180, 289, 298, 360, 407, 505, 956, 1005
AluI AGCT 8 cut(s) 180, 289, 298, 360, 407, 505, 956, 1005
Alw21I GWGCWC 2 cut(s) 291, 362
Alw26I GTCTC 3 cut(s) 212, 217, 673
AlwI GGATC 6 cut(s) 155, 440, 453, 493, 1016, 1029
Aor13HI TCCGGA 2 cut(s) 532, 1233
AoxI GGCC 2 cut(s) 275, 1079
ApeKI GCWGC 1 cut(s) 956
ApoI RAATTY 1 cut(s) 743
ArsI GACNNNNNNTTYG 4 cut(s) 589, 621, 922, 954
AseI ATTAAT 1 cut(s) 1010
AspLEI GCGC 1 cut(s) 621
AspS9I GGNCC 2 cut(s) 1123, 1370
AsuC2I CCSGG 3 cut(s) 676, 827, 1158
AsuHPI GGTGA 2 cut(s) 533, 1217
AsuII TTCGAA 1 cut(s) 1280
AvaII GGWCC 2 cut(s) 1123, 1370
BalI TGGCCA 1 cut(s) 1081
BamHI GGATCC 2 cut(s) 445, 1021
BanII GRGCYC 2 cut(s) 291, 362
BbrPI CACGTG 1 cut(s) 725
BbsI GAAGAC 1 cut(s) 52
Bbv12I GWGCWC 2 cut(s) 291, 362
BbvI GCAGC 1 cut(s) 943
BccI CCATC 3 cut(s) 359, 476, 1311
BceAI ACGGC 1 cut(s) 853
BciT130I CCWGG 1 cut(s) 1374
BciVI GTATCC 1 cut(s) 461
BclI TGATCA 1 cut(s) 88
BcnI CCSGG 3 cut(s) 676, 827, 1158
BcoDI GTCTC 3 cut(s) 212, 217, 673
BfaI CTAG 3 cut(s) 177, 969, 1386
BfuI GTATCC 1 cut(s) 461
BglII AGATCT 1 cut(s) 971
BisI GCNGC 3 cut(s) 258, 278, 957
BlsI GCNGC 3 cut(s) 259, 279, 958
Bme1390I CCNGG 4 cut(s) 676, 827, 1158, 1374
Bme18I GGWCC 2 cut(s) 1123, 1370
BmgT120I GGNCC 2 cut(s) 1123, 1370
BmiI GGNNCC 2 cut(s) 447, 1023
BmrFI CCNGG 4 cut(s) 676, 827, 1158, 1374
BmrI ACTGGG 1 cut(s) 1264
BmsI GCATC 3 cut(s) 868, 1108, 1232
BmuI ACTGGG 1 cut(s) 1264
BpiI GAAGAC 1 cut(s) 52
BpmI CTGGAG 1 cut(s) 275
Bpu14I TTCGAA 1 cut(s) 1280
BpuEI CTTGAG 1 cut(s) 79
BpuMI CCSGG 3 cut(s) 676, 827, 1158
BsaAI YACGTR 1 cut(s) 725
BsaBI GATNNNNATC 1 cut(s) 882
BsaHI GRCGYC 1 cut(s) 872
BsaWI WCCGGW 4 cut(s) 518, 532, 917, 1233
Bsc4I CCNNNNNNNGG 3 cut(s) 507, 1031, 1132
Bse118I RCCGGY 4 cut(s) 337, 773, 809, 1202
Bse1I ACTGG 2 cut(s) 1043, 1259
Bse8I GATNNNNATC 1 cut(s) 882
BseAI TCCGGA 2 cut(s) 532, 1233
BseBI CCWGG 1 cut(s) 1374
BseGI GGATG 2 cut(s) 415, 1303
BseJI GATNNNNATC 1 cut(s) 882
BseLI CCNNNNNNNGG 3 cut(s) 507, 1031, 1132
BseMII CTCAG 4 cut(s) 199, 375, 444, 770
BseNI ACTGG 2 cut(s) 1043, 1259
BseRI GAGGAG 2 cut(s) 163, 217
BseX3I CGGCCG 1 cut(s) 275
BseXI GCAGC 1 cut(s) 943
BseYI CCCAGC 1 cut(s) 501
Bsh1236I CGCG 2 cut(s) 621, 947
Bsh1285I CGRYCG 1 cut(s) 278
BshFI GGCC 2 cut(s) 277, 1081
BsiEI CGRYCG 1 cut(s) 278
BsiHKAI GWGCWC 2 cut(s) 291, 362
BslFI GGGAC 2 cut(s) 1271, 1345
BslI CCNNNNNNNGG 3 cut(s) 507, 1031, 1132
BsmAI GTCTC 3 cut(s) 212, 217, 673
BsmBI CGTCTC 1 cut(s) 217
BsmFI GGGAC 2 cut(s) 1271, 1345
BsnI GGCC 2 cut(s) 277, 1081
Bsp119I TTCGAA 1 cut(s) 1280
Bsp1286I GDGCHC 2 cut(s) 291, 362
Bsp13I TCCGGA 2 cut(s) 532, 1233
Bsp143I GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
Bsp68I TCGCGA 1 cut(s) 947
BspACI CCGC 6 cut(s) 258, 278, 449, 659, 1161, 1275
BspANI GGCC 2 cut(s) 277, 1081
BspCNI CTCAG 4 cut(s) 198, 374, 445, 769
BspEI TCCGGA 2 cut(s) 532, 1233
BspFNI CGCG 2 cut(s) 621, 947
BspLI GGNNCC 2 cut(s) 447, 1023
BspPI GGATC 6 cut(s) 155, 440, 453, 493, 1016, 1029
BspQI GCTCTTC 1 cut(s) 279
BspT104I TTCGAA 1 cut(s) 1280
BsrFI RCCGGY 4 cut(s) 337, 773, 809, 1202
BsrI ACTGG 2 cut(s) 1043, 1259
BssAI RCCGGY 4 cut(s) 337, 773, 809, 1202
BssMI GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
BssNI GRCGYC 1 cut(s) 872
Bst2UI CCWGG 1 cut(s) 1374
Bst4CI ACNGT 3 cut(s) 68, 938, 1034
Bst6I CTCTTC 3 cut(s) 220, 279, 620
BstACI GRCGYC 1 cut(s) 872
BstBAI YACGTR 1 cut(s) 725
BstBI TTCGAA 1 cut(s) 1280
BstC8I GCNNGC 2 cut(s) 339, 1083
BstDEI CTNAG 4 cut(s) 185, 361, 453, 756
BstF5I GGATG 2 cut(s) 415, 1303
BstFNI CGCG 2 cut(s) 621, 947
BstHHI GCGC 1 cut(s) 621
BstKTI GATC 9 cut(s) 91, 163, 265, 415, 448, 488, 793, 974, 1024
BstMAI GTCTC 3 cut(s) 212, 217, 673
BstMBI GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
BstMCI CGRYCG 1 cut(s) 278
BstMWI GCNNNNNNNGC 4 cut(s) 286, 295, 953, 1105
BstNI CCWGG 1 cut(s) 1374
BstNSI RCATGY 2 cut(s) 577, 659
BstSCI CCNGG 4 cut(s) 674, 825, 1156, 1372
BstUI CGCG 2 cut(s) 621, 947
BstV1I GCAGC 1 cut(s) 943
BstV2I GAAGAC 1 cut(s) 52
BstX2I RGATCY 3 cut(s) 445, 971, 1021
BstXI CCANNNNNNTGG 1 cut(s) 602
BstYI RGATCY 3 cut(s) 445, 971, 1021
BstZI CGGCCG 1 cut(s) 275
BsuI GTATCC 1 cut(s) 461
BsuRI GGCC 2 cut(s) 277, 1081
BtsCI GGATG 2 cut(s) 415, 1303
BtsI GCAGTG 1 cut(s) 252
BtsIMutI CAGTG 4 cut(s) 39, 252, 302, 1036
BtuMI TCGCGA 1 cut(s) 947
Cac8I GCNNGC 2 cut(s) 339, 1083
CfoI GCGC 1 cut(s) 621
Cfr10I RCCGGY 4 cut(s) 337, 773, 809, 1202
Cfr13I GGNCC 2 cut(s) 1123, 1370
Csp6I GTAC 2 cut(s) 540, 835
CviAII CATG 5 cut(s) 574, 656, 1112, 1120, 1395
CviQI GTAC 2 cut(s) 540, 835
DdeI CTNAG 4 cut(s) 185, 361, 453, 756
DpnI GATC 9 cut(s) 90, 162, 264, 414, 447, 487, 792, 973, 1023
DpnII GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
EaeI YGGCCR 2 cut(s) 275, 1079
EagI CGGCCG 1 cut(s) 275
Eam1104I CTCTTC 3 cut(s) 220, 279, 620
EarI CTCTTC 3 cut(s) 220, 279, 620
EciI GGCGGA 1 cut(s) 438
Ecl136II GAGCTC 2 cut(s) 289, 360
EclXI CGGCCG 1 cut(s) 275
Eco24I GRGCYC 2 cut(s) 291, 362
Eco47I GGWCC 2 cut(s) 1123, 1370
Eco52I CGGCCG 1 cut(s) 275
Eco53kI GAGCTC 2 cut(s) 289, 360
Eco72I CACGTG 1 cut(s) 725
EcoICRI GAGCTC 2 cut(s) 289, 360
EcoRII CCWGG 1 cut(s) 1372
EcoT22I ATGCAT 1 cut(s) 883
EcoT38I GRGCYC 2 cut(s) 291, 362
Esp3I CGTCTC 1 cut(s) 217
FaeI CATG 5 cut(s) 577, 659, 1115, 1123, 1398
FaqI GGGAC 2 cut(s) 1271, 1345
FatI CATG 5 cut(s) 573, 655, 1111, 1119, 1394
FauI CCCGC 1 cut(s) 1282
FauNDI CATATG 1 cut(s) 490
FbaI TGATCA 1 cut(s) 88
Fnu4HI GCNGC 3 cut(s) 258, 278, 957
FokI GGATG 2 cut(s) 402, 1290
FriOI GRGCYC 2 cut(s) 291, 362
Fsp4HI GCNGC 3 cut(s) 258, 278, 957
FspBI CTAG 3 cut(s) 177, 969, 1386
GlaI GCGC 1 cut(s) 620
GluI GCNGC 3 cut(s) 258, 278, 957
GsaI CCCAGC 1 cut(s) 505
GsuI CTGGAG 1 cut(s) 275
HaeIII GGCC 2 cut(s) 277, 1081
HhaI GCGC 1 cut(s) 621
Hin1I GRCGYC 1 cut(s) 872
Hin1II CATG 5 cut(s) 577, 659, 1115, 1123, 1398
Hin6I GCGC 1 cut(s) 619
HinP1I GCGC 1 cut(s) 619
HincII GTYRAC 1 cut(s) 1252
HindII GTYRAC 1 cut(s) 1252
HindIII AAGCTT 1 cut(s) 1003
HphI GGTGA 2 cut(s) 533, 1217
Hpy166II GTNNAC 6 cut(s) 783, 989, 1147, 1166, 1193, 1252
Hpy188III TCNNGA 6 cut(s) 42, 96, 292, 533, 946, 1234
Hpy8I GTNNAC 6 cut(s) 783, 989, 1147, 1166, 1193, 1252
Hpy99I CGWCG 1 cut(s) 942
HpyAV CCTTC 4 cut(s) 232, 530, 1012, 1202
HpyCH4III ACNGT 3 cut(s) 68, 938, 1034
HpyCH4IV ACGT 3 cut(s) 711, 724, 872
HpyCH4V TGCA 2 cut(s) 881, 1064
HpyF10VI GCNNNNNNNGC 4 cut(s) 286, 295, 953, 1105
HpyF3I CTNAG 4 cut(s) 185, 361, 453, 756
HpySE526I ACGT 3 cut(s) 711, 724, 872
Hsp92I GRCGYC 1 cut(s) 872
Hsp92II CATG 5 cut(s) 577, 659, 1115, 1123, 1398
HspAI GCGC 1 cut(s) 619
Kpn2I TCCGGA 2 cut(s) 532, 1233
KroI GCCGGC 1 cut(s) 337
KroNI GCCGGC 1 cut(s) 339
Ksp22I TGATCA 1 cut(s) 88
Kzo9I GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
LguI GCTCTTC 1 cut(s) 279
LmnI GCTCC 2 cut(s) 294, 953
Lsp1109I GCAGC 1 cut(s) 943
LweI GCATC 3 cut(s) 868, 1108, 1232
MaeI CTAG 3 cut(s) 177, 969, 1386
MaeII ACGT 3 cut(s) 711, 724, 872
MaeIII GTNAC 5 cut(s) 34, 670, 727, 1034, 1349
MalI GATC 9 cut(s) 90, 162, 264, 414, 447, 487, 792, 973, 1023
MboI GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
MfeI CAATTG 1 cut(s) 1309
MflI RGATCY 3 cut(s) 445, 971, 1021
MhlI GDGCHC 2 cut(s) 291, 362
MlsI TGGCCA 1 cut(s) 1081
MluNI TGGCCA 1 cut(s) 1081
MlyI GAGTC 2 cut(s) 533, 1171
MmeI TCCRAC 2 cut(s) 270, 587
MnlI CCTC 6 cut(s) 184, 238, 253, 429, 1319, 1361
Mox20I TGGCCA 1 cut(s) 1081
Mph1103I ATGCAT 1 cut(s) 883
MroI TCCGGA 2 cut(s) 532, 1233
MroNI GCCGGC 1 cut(s) 337
MscI TGGCCA 1 cut(s) 1081
MseI TTAA 6 cut(s) 8, 72, 578, 708, 795, 1010
MslI CAYNNNNRTG 1 cut(s) 654
Msp20I TGGCCA 1 cut(s) 1081
MspR9I CCNGG 4 cut(s) 676, 827, 1158, 1374
MunI CAATTG 1 cut(s) 1309
MvaI CCWGG 1 cut(s) 1374
MvnI CGCG 2 cut(s) 621, 947
MwoI GCNNNNNNNGC 4 cut(s) 286, 295, 953, 1105
NaeI GCCGGC 1 cut(s) 339
NciI CCSGG 3 cut(s) 676, 827, 1158
NdeI CATATG 1 cut(s) 490
NdeII GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
NgoMIV GCCGGC 1 cut(s) 337
NlaIII CATG 5 cut(s) 577, 659, 1115, 1123, 1398
NlaIV GGNNCC 2 cut(s) 447, 1023
NmuCI GTSAC 2 cut(s) 34, 1034
NruI TCGCGA 1 cut(s) 947
NsiI ATGCAT 1 cut(s) 883
NspI RCATGY 2 cut(s) 577, 659
NspV TTCGAA 1 cut(s) 1280
PciI ACATGT 1 cut(s) 573
PciSI GCTCTTC 1 cut(s) 279
PdiI GCCGGC 1 cut(s) 339
PfeI GAWTC 9 cut(s) 193, 544, 632, 855, 942, 1237, 1282, 1291, 1336
PfoI TCCNGGA 1 cut(s) 1372
PkrI GCNGC 3 cut(s) 259, 279, 958
PleI GAGTC 2 cut(s) 532, 1171
PmaCI CACGTG 1 cut(s) 725
PmlI CACGTG 1 cut(s) 725
PpsI GAGTC 2 cut(s) 532, 1171
Ppu21I YACGTR 1 cut(s) 725
PscI ACATGT 1 cut(s) 573
PshBI ATTAAT 1 cut(s) 1010
Psp124BI GAGCTC 2 cut(s) 291, 362
Psp6I CCWGG 1 cut(s) 1372
PspCI CACGTG 1 cut(s) 725
PspFI CCCAGC 1 cut(s) 501
PspGI CCWGG 1 cut(s) 1372
PspN4I GGNNCC 2 cut(s) 447, 1023
PspPI GGNCC 2 cut(s) 1123, 1370
PsuI RGATCY 3 cut(s) 445, 971, 1021
RruI TCGCGA 1 cut(s) 947
RsaI GTAC 2 cut(s) 541, 836
RsaNI GTAC 2 cut(s) 540, 835
RseI CAYNNNNRTG 1 cut(s) 654
SacI GAGCTC 2 cut(s) 291, 362
SapI GCTCTTC 1 cut(s) 279
SaqAI TTAA 6 cut(s) 8, 72, 578, 708, 795, 1010
SatI GCNGC 3 cut(s) 258, 278, 957
Sau3AI GATC 9 cut(s) 88, 160, 262, 412, 445, 485, 790, 971, 1021
Sau96I GGNCC 2 cut(s) 1123, 1370
SchI GAGTC 2 cut(s) 533, 1171
ScrFI CCNGG 4 cut(s) 676, 827, 1158, 1374
SduI GDGCHC 2 cut(s) 291, 362
SfaNI GCATC 3 cut(s) 868, 1108, 1232
SfuI TTCGAA 1 cut(s) 1280
SinI GGWCC 2 cut(s) 1123, 1370
SmiMI CAYNNNNRTG 1 cut(s) 654
SmlI CTYRAG 1 cut(s) 94
SmoI CTYRAG 1 cut(s) 94
SsiI CCGC 6 cut(s) 258, 278, 449, 659, 1161, 1275
SspI AATATT 1 cut(s) 686
SspMI CTAG 3 cut(s) 177, 969, 1386
SstI GAGCTC 2 cut(s) 291, 362
StyD4I CCNGG 4 cut(s) 674, 825, 1156, 1372
TaaI ACNGT 3 cut(s) 68, 938, 1034
TaiI ACGT 3 cut(s) 714, 727, 875
TaqI TCGA 6 cut(s) 321, 411, 886, 940, 996, 1280
TauI GCSGC 2 cut(s) 260, 280
TfiI GAWTC 9 cut(s) 193, 544, 632, 855, 942, 1237, 1282, 1291, 1336
Tru1I TTAA 6 cut(s) 8, 72, 578, 708, 795, 1010
Tru9I TTAA 6 cut(s) 8, 72, 578, 708, 795, 1010
TscAI CASTG 4 cut(s) 39, 259, 309, 1043
TseFI GTSAC 2 cut(s) 34, 1034
TseI GCWGC 1 cut(s) 956
Tsp45I GTSAC 2 cut(s) 34, 1034
TspDTI ATGAA 2 cut(s) 116, 507
TspGWI ACGGA 2 cut(s) 578, 660
TspRI CASTG 4 cut(s) 39, 259, 309, 1043
VpaK11BI GGWCC 2 cut(s) 1123, 1370
VspI ATTAAT 1 cut(s) 1010
XapI RAATTY 1 cut(s) 743
XceI RCATGY 2 cut(s) 577, 659
XspI CTAG 3 cut(s) 177, 969, 1386
ZraI GACGTC 1 cut(s) 873
Zsp2I ATGCAT 1 cut(s) 883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.