MD13G1097000.v1.1

Neprosin

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
6871524 .. 6877575
6052 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1097000.v1.1.491

Sequence Viewer

Length: 1431 bp
ATGGTCATCGTGTATTGGGTATTGGATTTGGTGGGAGCTGAGTTTCCATGGACAGAAAATAGCACCAATATTTTATGCTGCGAATTGCATGACCCCAGAAGAAGACAACACCAACAACACGAAGAAGAGGATTCAACAAAAGCAAAAAAACAAGAAAGTTTCTCAAGCAATATGGCTTGTAGCTACTCCAAGATTTCCCCAATCATTTCCATTCTTGTTTGCTTCCTTCTGGTTGCTTCTTCAATTTGTCCGGTGGCACAATCTTCTGATATCCACCGCGAAAGCACTGCCAATCAGACGTTGAATCCGGAAAAAGAACTGAAGAAGTTGAAGATTATGAGAGCTCGTCTTAACAAGATAAACAAGCCTGCTTTCAAGACAATTCAGAGTCCGGATGGCGATCTTATAGATTGTGTTCTTTCTCATCACCAACCAGCTTTTGATCATCCCCAGTTAAAGGGACAGAAGCCATTGGACCCGCCGGAGAGACCGAAAGGCCGGAGCCCTCGAGAAATGGCGACTGAAAACTACCAGCTGTGGAGCATGTCAGGAAATCTCTGCCCACAAGGAACAGTTCCAATTAGAAGAACGAGAGAGGAGGATATGATGAGAGCAAGCTCTGTTAAAAGATTTGGAAGAAAACTAAGTAGGCATGTCAGAAGAGATACATCCAGCAACGGCCATGAGCATGCGGTTGGGTATGTGAGTGGAGATCAATACTATGGAGCCAAAGCAAGCATCAATGTGTGGGCCCCCACAGTTGTTAATCAATACGAATTTAGCTTGTCTCAATTGTGGGTCATCTCTGGTTCTTTTGGTGATGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGCCCGGAGCTATATGGGGACAACTACCCCAGATTCTTTACTTATTGGACTACGGATGCATATCAAGCAACTGGATGCTACAATTTGCTGTGTTCGGGTTTTGTTCAGACCAACAGTAGAATCGCCATTGGAGCTGCAATTTCTCCAACTTCTTCCTACCATGGTGGACAGTTTGATATTAGCTTGTTGATTTGGAAGGATCCGAAGCATGGAAATTGGTGGCTGGAATTCGGGAACGGTGTCCTAGTCGGATACTGGCCATCATTCTTGTTCACTCACCTTCAAGACCACGCAAGCATGGTACAATTCGGTGGAGAAGTTGTGAACTCGAGGCCTTCGGGCTCCCACACAGCTACACAGATGGGCAGTGGGCACTTTGCAGGTGAAGGGTTTGGAAAAGCTTCATATTTTCGAAACATGCAGGTTGTGGATTGGGATAACAGCTTAATCCCATTATCCAACCTTAAAGTTTTGGCTGATCATCCAAATTGCTACGACATTCAAGGAGGGATTAACAACTTTTGGGGGAATTATTTTTACTATGGAGGTCCTGGAAGAAATGTGAGGTGTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

477

Amino Acids

53.6

Weight (kDa)

7.25

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neprosin_AP PF14365 127 - 234 1.3e-37 Neprosin activation peptide
Neprosin PF03080 258 - 469 5.6e-87 Neprosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1226
Acc36I ACCTGC 3 cut(s) 841, 1226, 1267
AccII CGCG 1 cut(s) 279
AccIII TCCGGA 2 cut(s) 307, 391
AciI CCGC 3 cut(s) 277, 479, 692
AclWI GGATC 2 cut(s) 1049, 1062
AcoI YGGCCR 2 cut(s) 679, 1112
AcsI RAATTY 2 cut(s) 776, 1082
AcuI CTGAAG 1 cut(s) 341
AfaI GTAC 1 cut(s) 1158
AfiI CCNNNNNNNGG 2 cut(s) 457, 1064
AgsI TTSAA 8 cut(s) 135, 243, 304, 331, 376, 839, 1139, 1358
AjnI CCWGG 1 cut(s) 1405
Alw21I GWGCWC 1 cut(s) 346
Alw26I GTCTC 2 cut(s) 481, 792
AlwI GGATC 2 cut(s) 1049, 1062
Ama87I CYCGRG 2 cut(s) 507, 1183
Aor13HI TCCGGA 2 cut(s) 307, 391
AoxI GGCC 5 cut(s) 496, 679, 750, 1112, 1187
ApaI GGGCCC 1 cut(s) 754
ApeKI GCWGC 2 cut(s) 78, 989
ApoI RAATTY 2 cut(s) 776, 1082
Asp700I GAANNNNTTC 1 cut(s) 1255
AspS9I GGNCC 4 cut(s) 475, 750, 751, 1403
AsuC2I CCSGG 1 cut(s) 860
AsuHPI GGTGA 4 cut(s) 419, 830, 1124, 1250
AsuII TTCGAA 1 cut(s) 1267
AvaI CYCGRG 2 cut(s) 507, 1183
AvaII GGWCC 2 cut(s) 475, 1403
BaeGI GKGCMC 2 cut(s) 754, 1230
BalI TGGCCA 1 cut(s) 1114
BamHI GGATCC 1 cut(s) 1054
BanII GRGCYC 4 cut(s) 346, 506, 754, 1199
BbsI GAAGAC 1 cut(s) 109
Bbv12I GWGCWC 1 cut(s) 346
BbvI GCAGC 2 cut(s) 65, 976
BccI CCATC 3 cut(s) 389, 1123, 1210
BceAI ACGGC 1 cut(s) 694
BcgI CGANNNNNNTGC 2 cut(s) 269, 303
BciT130I CCWGG 1 cut(s) 1407
BciVI GTATCC 1 cut(s) 1100
BclI TGATCA 2 cut(s) 442, 1333
BcnI CCSGG 1 cut(s) 860
BcoDI GTCTC 2 cut(s) 481, 792
BfaI CTAG 1 cut(s) 1100
BfuAI ACCTGC 3 cut(s) 841, 1226, 1267
BfuI GTATCC 1 cut(s) 1100
BisI GCNGC 2 cut(s) 79, 990
BlsI GCNGC 2 cut(s) 80, 991
Bme1390I CCNGG 2 cut(s) 860, 1407
Bme18I GGWCC 2 cut(s) 475, 1403
BmeT110I CYCGRG 2 cut(s) 507, 1183
BmgT120I GGNCC 4 cut(s) 475, 750, 751, 1403
BmiI GGNNCC 7 cut(s) 477, 503, 727, 752, 753, 1056, 1198
BmrFI CCNGG 2 cut(s) 860, 1407
BmrI ACTGGG 1 cut(s) 445
BmsI GCATC 3 cut(s) 747, 901, 920
BmuI ACTGGG 1 cut(s) 445
BpiI GAAGAC 1 cut(s) 109
Bpu14I TTCGAA 1 cut(s) 1267
BpuEI CTTGAG 1 cut(s) 148
BpuMI CCSGG 1 cut(s) 860
BsaBI GATNNNNATC 2 cut(s) 399, 915
BsaI GGTCTC 1 cut(s) 481
BsaJI CCNNGG 2 cut(s) 47, 1015
BsaWI WCCGGW 3 cut(s) 250, 307, 391
BsaXI ACNNNNNCTCC 2 cut(s) 1161, 1191
Bsc4I CCNNNNNNNGG 2 cut(s) 457, 1064
Bse1I ACTGG 3 cut(s) 451, 931, 1115
Bse8I GATNNNNATC 2 cut(s) 399, 915
BseAI TCCGGA 2 cut(s) 307, 391
BseBI CCWGG 1 cut(s) 1407
BseDI CCNNGG 2 cut(s) 47, 1015
BseGI GGATG 6 cut(s) 400, 445, 668, 916, 935, 1336
BseJI GATNNNNATC 2 cut(s) 399, 915
BseLI CCNNNNNNNGG 2 cut(s) 457, 1064
BseMII CTCAG 1 cut(s) 30
BseNI ACTGG 3 cut(s) 451, 931, 1115
BseRI GAGGAG 1 cut(s) 611
BseSI GKGCMC 2 cut(s) 754, 1230
BseXI GCAGC 2 cut(s) 65, 976
Bsh1236I CGCG 1 cut(s) 279
BshFI GGCC 5 cut(s) 498, 681, 752, 1114, 1189
BsiHKAI GWGCWC 1 cut(s) 346
BsiHKCI CYCGRG 2 cut(s) 507, 1183
BsiSI CCGG 6 cut(s) 251, 308, 392, 482, 499, 860
BslFI GGGAC 3 cut(s) 474, 887, 1410
BslI CCNNNNNNNGG 2 cut(s) 457, 1064
BsmAI GTCTC 2 cut(s) 481, 792
BsmFI GGGAC 3 cut(s) 474, 887, 1410
BsnI GGCC 5 cut(s) 498, 681, 752, 1114, 1189
Bso31I GGTCTC 1 cut(s) 481
BsoBI CYCGRG 2 cut(s) 507, 1183
Bsp119I TTCGAA 1 cut(s) 1267
Bsp120I GGGCCC 1 cut(s) 750
Bsp1286I GDGCHC 5 cut(s) 346, 506, 754, 1199, 1230
Bsp13I TCCGGA 2 cut(s) 307, 391
Bsp143I GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
Bsp19I CCATGG 2 cut(s) 47, 1015
BspACI CCGC 3 cut(s) 277, 479, 692
BspANI GGCC 5 cut(s) 498, 681, 752, 1114, 1189
BspCNI CTCAG 1 cut(s) 31
BspEI TCCGGA 2 cut(s) 307, 391
BspFNI CGCG 1 cut(s) 279
BspLI GGNNCC 7 cut(s) 477, 503, 727, 752, 753, 1056, 1198
BspMI ACCTGC 3 cut(s) 841, 1226, 1267
BspPI GGATC 2 cut(s) 1049, 1062
BspT104I TTCGAA 1 cut(s) 1267
BspTNI GGTCTC 1 cut(s) 481
BsrI ACTGG 3 cut(s) 451, 931, 1115
BssECI CCNNGG 2 cut(s) 47, 1015
BssMI GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
BssT1I CCWWGG 2 cut(s) 47, 1015
Bst2UI CCWGG 1 cut(s) 1407
Bst4CI ACNGT 5 cut(s) 574, 760, 971, 1026, 1094
Bst6I CTCTTC 2 cut(s) 120, 655
BstBI TTCGAA 1 cut(s) 1267
BstC8I GCNNGC 5 cut(s) 369, 616, 690, 736, 1150
BstDEI CTNAG 2 cut(s) 39, 644
BstDSI CCRYGG 2 cut(s) 47, 1015
BstF5I GGATG 6 cut(s) 400, 445, 668, 916, 935, 1336
BstFNI CGCG 1 cut(s) 279
BstKTI GATC 6 cut(s) 403, 445, 715, 826, 1057, 1336
BstMAI GTCTC 2 cut(s) 481, 792
BstMBI GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
BstMWI GCNNNNNNNGC 2 cut(s) 920, 986
BstNI CCWGG 1 cut(s) 1407
BstNSI RCATGY 4 cut(s) 547, 656, 692, 1276
BstSCI CCNGG 2 cut(s) 858, 1405
BstSLI GKGCMC 2 cut(s) 754, 1230
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 2 cut(s) 65, 976
BstV2I GAAGAC 1 cut(s) 109
BstX2I RGATCY 1 cut(s) 1054
BstYI RGATCY 1 cut(s) 1054
BsuI GTATCC 1 cut(s) 1100
BsuRI GGCC 5 cut(s) 498, 681, 752, 1114, 1189
BtgI CCRYGG 2 cut(s) 47, 1015
BtsCI GGATG 6 cut(s) 400, 445, 668, 916, 935, 1336
BtsI GCAGTG 2 cut(s) 285, 1228
BtsIMutI CAGTG 2 cut(s) 285, 1228
BveI ACCTGC 3 cut(s) 841, 1226, 1267
Cac8I GCNNGC 5 cut(s) 369, 616, 690, 736, 1150
Cfr13I GGNCC 4 cut(s) 475, 750, 751, 1403
Csp6I GTAC 1 cut(s) 1157
CviQI GTAC 1 cut(s) 1157
DdeI CTNAG 2 cut(s) 39, 644
DpnI GATC 6 cut(s) 402, 444, 714, 825, 1056, 1335
DpnII GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
EaeI YGGCCR 2 cut(s) 679, 1112
Eam1104I CTCTTC 2 cut(s) 120, 655
EarI CTCTTC 2 cut(s) 120, 655
Ecl136II GAGCTC 1 cut(s) 344
Eco130I CCWWGG 2 cut(s) 47, 1015
Eco147I AGGCCT 1 cut(s) 1189
Eco24I GRGCYC 4 cut(s) 346, 506, 754, 1199
Eco31I GGTCTC 1 cut(s) 481
Eco32I GATATC 1 cut(s) 271
Eco47I GGWCC 2 cut(s) 475, 1403
Eco53kI GAGCTC 1 cut(s) 344
Eco57I CTGAAG 1 cut(s) 341
Eco88I CYCGRG 2 cut(s) 507, 1183
EcoICRI GAGCTC 1 cut(s) 344
EcoO109I RGGNCCY 2 cut(s) 751, 1403
EcoRI GAATTC 1 cut(s) 1082
EcoRII CCWGG 1 cut(s) 1405
EcoRV GATATC 1 cut(s) 271
EcoT14I CCWWGG 2 cut(s) 47, 1015
EcoT22I ATGCAT 1 cut(s) 916
EcoT38I GRGCYC 4 cut(s) 346, 506, 754, 1199
ErhI CCWWGG 2 cut(s) 47, 1015
FaqI GGGAC 3 cut(s) 474, 887, 1410
FauI CCCGC 1 cut(s) 486
FbaI TGATCA 2 cut(s) 442, 1333
Fnu4HI GCNGC 2 cut(s) 79, 990
FokI GGATG 6 cut(s) 407, 432, 655, 923, 942, 1323
FriOI GRGCYC 4 cut(s) 346, 506, 754, 1199
Fsp4HI GCNGC 2 cut(s) 79, 990
FspBI CTAG 1 cut(s) 1100
GluI GCNGC 2 cut(s) 79, 990
HaeIII GGCC 5 cut(s) 498, 681, 752, 1114, 1189
HapII CCGG 6 cut(s) 251, 308, 392, 482, 499, 860
HindIII AAGCTT 1 cut(s) 1254
HinfI GANTC 5 cut(s) 131, 304, 388, 888, 975
HpaII CCGG 6 cut(s) 251, 308, 392, 482, 499, 860
HphI GGTGA 4 cut(s) 419, 830, 1124, 1250
Hpy166II GTNNAC 3 cut(s) 1022, 1128, 1180
Hpy188I TCNGA 7 cut(s) 268, 297, 387, 659, 963, 1059, 1106
Hpy188III TCNNGA 7 cut(s) 308, 376, 392, 509, 549, 1087, 1139
Hpy8I GTNNAC 3 cut(s) 1022, 1128, 1180
HpyAV CCTTC 5 cut(s) 236, 1045, 1145, 1200, 1235
HpyCH4III ACNGT 5 cut(s) 574, 760, 971, 1026, 1094
HpyCH4IV ACGT 1 cut(s) 299
HpyCH4V TGCA 5 cut(s) 88, 914, 992, 1235, 1276
HpyF10VI GCNNNNNNNGC 2 cut(s) 920, 986
HpyF3I CTNAG 2 cut(s) 39, 644
HpySE526I ACGT 1 cut(s) 299
Kpn2I TCCGGA 2 cut(s) 307, 391
Ksp22I TGATCA 2 cut(s) 442, 1333
Kzo9I GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
LmnI GCTCC 7 cut(s) 35, 501, 540, 725, 862, 986, 1202
Lsp1109I GCAGC 2 cut(s) 65, 976
LweI GCATC 3 cut(s) 747, 901, 920
MaeI CTAG 1 cut(s) 1100
MaeII ACGT 1 cut(s) 299
MalI GATC 6 cut(s) 402, 444, 714, 825, 1056, 1335
MboI GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
MfeI CAATTG 1 cut(s) 791
MflI RGATCY 1 cut(s) 1054
MhlI GDGCHC 5 cut(s) 346, 506, 754, 1199, 1230
MlsI TGGCCA 1 cut(s) 1114
MluNI TGGCCA 1 cut(s) 1114
MlyI GAGTC 1 cut(s) 397
MmeI TCCRAC 3 cut(s) 1025, 1084, 1338
MnlI CCTC 8 cut(s) 121, 516, 589, 592, 1179, 1355, 1394, 1413
Mox20I TGGCCA 1 cut(s) 1114
Mph1103I ATGCAT 1 cut(s) 916
MroI TCCGGA 2 cut(s) 307, 391
MroXI GAANNNNTTC 1 cut(s) 1255
MscI TGGCCA 1 cut(s) 1114
MseI TTAA 7 cut(s) 351, 455, 624, 765, 1301, 1320, 1368
MslI CAYNNNNRTG 2 cut(s) 687, 743
Msp20I TGGCCA 1 cut(s) 1114
MspA1I CMGCKG 1 cut(s) 535
MspI CCGG 6 cut(s) 251, 308, 392, 482, 499, 860
MspR9I CCNGG 2 cut(s) 860, 1407
MunI CAATTG 1 cut(s) 791
MvaI CCWGG 1 cut(s) 1407
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 2 cut(s) 920, 986
NciI CCSGG 1 cut(s) 860
NcoI CCATGG 2 cut(s) 47, 1015
NdeII GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
NlaIV GGNNCC 7 cut(s) 477, 503, 727, 752, 753, 1056, 1198
NsiI ATGCAT 1 cut(s) 916
NspI RCATGY 4 cut(s) 547, 656, 692, 1276
NspV TTCGAA 1 cut(s) 1267
PaeI GCATGC 1 cut(s) 692
PaeR7I CTCGAG 2 cut(s) 507, 1183
PaqCI CACCTGC 1 cut(s) 1226
PceI AGGCCT 1 cut(s) 1189
PdmI GAANNNNTTC 1 cut(s) 1255
PfeI GAWTC 4 cut(s) 131, 304, 888, 975
PfoI TCCNGGA 1 cut(s) 1405
PkrI GCNGC 2 cut(s) 80, 991
PleI GAGTC 1 cut(s) 396
PpsI GAGTC 1 cut(s) 396
PpuMI RGGWCCY 1 cut(s) 1403
Psp124BI GAGCTC 1 cut(s) 346
Psp5II RGGWCCY 1 cut(s) 1403
Psp6I CCWGG 1 cut(s) 1405
PspGI CCWGG 1 cut(s) 1405
PspN4I GGNNCC 7 cut(s) 477, 503, 727, 752, 753, 1056, 1198
PspOMI GGGCCC 1 cut(s) 750
PspPI GGNCC 4 cut(s) 475, 750, 751, 1403
PspPPI RGGWCCY 1 cut(s) 1403
PspXI VCTCGAGB 1 cut(s) 1183
PsuI RGATCY 1 cut(s) 1054
PvuII CAGCTG 1 cut(s) 535
RsaI GTAC 1 cut(s) 1158
RsaNI GTAC 1 cut(s) 1157
RseI CAYNNNNRTG 2 cut(s) 687, 743
SacI GAGCTC 1 cut(s) 346
SaqAI TTAA 7 cut(s) 351, 455, 624, 765, 1301, 1320, 1368
SatI GCNGC 2 cut(s) 79, 990
Sau3AI GATC 6 cut(s) 400, 442, 712, 823, 1054, 1333
Sau96I GGNCC 4 cut(s) 475, 750, 751, 1403
SchI GAGTC 1 cut(s) 397
ScrFI CCNGG 2 cut(s) 860, 1407
SduI GDGCHC 5 cut(s) 346, 506, 754, 1199, 1230
SfaNI GCATC 3 cut(s) 747, 901, 920
Sfr274I CTCGAG 2 cut(s) 507, 1183
SfuI TTCGAA 1 cut(s) 1267
SinI GGWCC 2 cut(s) 475, 1403
SlaI CTCGAG 2 cut(s) 507, 1183
SmiMI CAYNNNNRTG 2 cut(s) 687, 743
SmlI CTYRAG 3 cut(s) 163, 507, 1183
SmoI CTYRAG 3 cut(s) 163, 507, 1183
SphI GCATGC 1 cut(s) 692
SseBI AGGCCT 1 cut(s) 1189
SsiI CCGC 3 cut(s) 277, 479, 692
SspI AATATT 1 cut(s) 70
SspMI CTAG 1 cut(s) 1100
SstI GAGCTC 1 cut(s) 346
StuI AGGCCT 1 cut(s) 1189
StyD4I CCNGG 2 cut(s) 858, 1405
StyI CCWWGG 2 cut(s) 47, 1015
TaaI ACNGT 5 cut(s) 574, 760, 971, 1026, 1094
TaiI ACGT 1 cut(s) 302
TaqI TCGA 3 cut(s) 508, 1184, 1267
TaqII GACCGA 1 cut(s) 505
TfiI GAWTC 4 cut(s) 131, 304, 888, 975
Tru1I TTAA 7 cut(s) 351, 455, 624, 765, 1301, 1320, 1368
Tru9I TTAA 7 cut(s) 351, 455, 624, 765, 1301, 1320, 1368
TscAI CASTG 2 cut(s) 292, 1228
TseI GCWGC 2 cut(s) 78, 989
TspDTI ATGAA 1 cut(s) 1248
TspGWI ACGGA 1 cut(s) 923
TspRI CASTG 2 cut(s) 292, 1228
VpaK11BI GGWCC 2 cut(s) 475, 1403
XapI RAATTY 2 cut(s) 776, 1082
XceI RCATGY 4 cut(s) 547, 656, 692, 1276
XhoI CTCGAG 2 cut(s) 507, 1183
XmnI GAANNNNTTC 1 cut(s) 1255
XspI CTAG 1 cut(s) 1100
Zsp2I ATGCAT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.