FvH4_4g25820

Neprosin

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
27482105 .. 27486389
4285 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g25820.t1

Sequence Viewer

Length: 1380 bp
ATGGTCGTCGTGTGTTGGAAGAGCAATCGATTGTGTTATTTTGATGACACAAGAAGACAATTACCACATCAACGTAAACAACAAAGGGATTCAACACAAGAAACAGGACAAGAAAATTTCACAGCAGCCATGGCTTCTAGCAGCTGGTCTATGATTTCCTCCCCAATCATTCCTCTTCTTGTTTGCTTCCTTCTTGTTTCTTCTTCAATATGTCAAGTAGTCCACGCCTCCGAAATGGCCAATCAGACTTTCAATCCCGAGCAACAGTTAAAGAAGTTGAAGAACATGAAGGCTCGTCTCAGAAGAATCAACAAGCCTGCCCTCAAGACATTTCAGAGTCCAGATGGTGATCTCATAGATTGTGTTCACTCTCATCACCAACCTGCTTTTGATCATCCTCGATTAAAAGGACAGAAGCCATTGGATCCACCGGAGAGACCAAAAGGACTTAACCCCACTAGCATGATCCATGAAAATTTTCAGCTATGGAGCTTATCAGGTAATATATGCCCAGATGGAACGATTCCGATTCGAAGAACAAGAGAGCAAGACGTGCTCAGAGCTAGCTCGGTTCGACGATACGGAAGAAAATCACCAAGGCATGTTCGAAGAGATACATCTAGCAATGGCCATGAGCATGCAGTTGGGTATGTGAGTGGAGATCAATACTATGGAGCAAAAGCAAGCATCAATGTATGGGCACCAAAGGTTGTGAATCAATATGAATTCAGCTTATCTCAAATGTGGGTTATTTCTGGTTCATTTGGCGACGATCTCAACACCATTGAAGCTGGTTGGCAGGTCAGCCCAGAGCTATATGGGGACAACTATCCTAGATTCTTTACTTACTGGACTTCAGATGCCTATCAAGCAACTGGGTGCTACAATCTGCTGTGTTCGGGTTTTGTTCAGACGAATAGTCGAATTGCCATTGGAGCTGCAATTTCTCCGACTTCTGGTTACAATGGTGGACAGTTTGATATTAGCTTATTGATTTGGAAGGATCCAAAGCATGGAAATTGGTGGCTGGAATTTGGGAATGGGGTTCTAGTTGGATACTGGCCATCATTCTTGTTCACTCATCTTCAAAACCACGCAAGCATGGTACAATTTGGTGGAGAAGTTGTAAACTCAAGGCCTTCTGGATCTCACACTGCAACACAAATGGGAAGTGGTCATTTTGCAGGAGAAGGCTTTGGCAAAGCTTCTTACTTTAGAAACTTGCAGGTTGTGGATTGGGACAACAGCCTAATCCCATTATCAAACCTCAAAGTTTTGGCAGATCATCCAAATTGCTATGACATCCAAGGAGGGATTAACAATTTTTGGGGGAATTATTTTTACTATGGTGGTCCTGGAAGAAATGTGAGGTGTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

460

Amino Acids

51.69

Weight (kDa)

8.89

Isoelectric Point (pI)

33.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neprosin_AP PF14365 110 - 217 1.1e-37 Neprosin activation peptide
Neprosin PF03080 241 - 452 5.3e-87 Neprosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 391, 790, 1216
AccB1I GGYRCC 1 cut(s) 700
AccB7I CCANNNNNTGG 1 cut(s) 1013
AclWI GGATC 6 cut(s) 419, 432, 460, 998, 1011, 1153
AcoI YGGCCR 3 cut(s) 237, 628, 1061
AcsI RAATTY 4 cut(s) 115, 475, 725, 1031
AcuI CTGAAG 1 cut(s) 840
AfaI GTAC 1 cut(s) 1107
AfiI CCNNNNNNNGG 2 cut(s) 956, 1013
AgsI TTSAA 6 cut(s) 93, 207, 253, 280, 788, 1088
AhdI GACNNNNNGTC 1 cut(s) 918
AjiI CACGTC 1 cut(s) 553
AjnI CCWGG 1 cut(s) 1354
AjuI GAANNNNNNNTTGG 2 cut(s) 233, 265
Alw21I GWGCWC 1 cut(s) 558
Alw26I GTCTC 2 cut(s) 302, 430
AlwI GGATC 6 cut(s) 419, 432, 460, 998, 1011, 1153
Ama87I CYCGRG 1 cut(s) 257
AoxI GGCC 4 cut(s) 237, 628, 1061, 1136
ApeKI GCWGC 3 cut(s) 125, 141, 938
ApoI RAATTY 4 cut(s) 115, 475, 725, 1031
Asp700I GAANNNNTTC 1 cut(s) 477
AspS9I GGNCC 1 cut(s) 1352
AsuHPI GGTGA 3 cut(s) 359, 368, 585
AsuII TTCGAA 2 cut(s) 532, 607
AsuNHI GCTAGC 1 cut(s) 563
AvaI CYCGRG 1 cut(s) 257
AvaII GGWCC 1 cut(s) 1352
BaeGI GKGCMC 1 cut(s) 703
BalI TGGCCA 3 cut(s) 239, 630, 1063
BamHI GGATCC 2 cut(s) 424, 1003
BanI GGYRCC 1 cut(s) 700
BbsI GAAGAC 1 cut(s) 61
Bbv12I GWGCWC 1 cut(s) 558
BbvI GCAGC 3 cut(s) 137, 153, 925
BccI CCATC 3 cut(s) 338, 509, 1072
BciT130I CCWGG 1 cut(s) 1356
BciVI GTATCC 1 cut(s) 1049
BclI TGATCA 1 cut(s) 391
BcoDI GTCTC 2 cut(s) 302, 430
BfaI CTAG 6 cut(s) 138, 459, 564, 621, 834, 1049
BfuAI ACCTGC 3 cut(s) 391, 790, 1216
BfuI GTATCC 1 cut(s) 1049
BisI GCNGC 3 cut(s) 126, 142, 939
BlsI GCNGC 3 cut(s) 127, 143, 940
Bme1390I CCNGG 1 cut(s) 1356
Bme18I GGWCC 1 cut(s) 1352
BmeRI GACNNNNNGTC 1 cut(s) 918
BmeT110I CYCGRG 1 cut(s) 257
BmgBI CACGTC 1 cut(s) 553
BmgT120I GGNCC 1 cut(s) 1352
BmiI GGNNCC 3 cut(s) 426, 702, 1005
BmrFI CCNGG 1 cut(s) 1356
BmrI ACTGGG 1 cut(s) 885
BmsI GCATC 2 cut(s) 696, 850
BmtI GCTAGC 1 cut(s) 567
BmuI ACTGGG 1 cut(s) 885
BpiI GAAGAC 1 cut(s) 61
Bpu14I TTCGAA 2 cut(s) 532, 607
BpuEI CTTGAG 2 cut(s) 308, 1117
Bsa29I ATCGAT 1 cut(s) 28
BsaBI GATNNNNATC 2 cut(s) 348, 864
BsaI GGTCTC 1 cut(s) 430
BsaJI CCNNGG 3 cut(s) 129, 596, 1306
BsaWI WCCGGW 1 cut(s) 430
BsaXI ACNNNNNCTCC 2 cut(s) 1110, 1140
Bsc4I CCNNNNNNNGG 2 cut(s) 956, 1013
Bse1I ACTGG 3 cut(s) 854, 880, 1064
Bse3DI GCAATG 1 cut(s) 631
Bse8I GATNNNNATC 2 cut(s) 348, 864
BseBI CCWGG 1 cut(s) 1356
BseCI ATCGAT 1 cut(s) 28
BseDI CCNNGG 3 cut(s) 129, 596, 1306
BseGI GGATG 3 cut(s) 394, 1285, 1302
BseJI GATNNNNATC 2 cut(s) 348, 864
BseLI CCNNNNNNNGG 2 cut(s) 956, 1013
BseMI GCAATG 1 cut(s) 631
BseMII CTCAG 2 cut(s) 313, 571
BseNI ACTGG 3 cut(s) 854, 880, 1064
BseSI GKGCMC 1 cut(s) 703
BseXI GCAGC 3 cut(s) 137, 153, 925
BshFI GGCC 4 cut(s) 239, 630, 1063, 1138
BshNI GGYRCC 1 cut(s) 700
BshVI ATCGAT 1 cut(s) 28
BsiHKAI GWGCWC 1 cut(s) 558
BsiHKCI CYCGRG 1 cut(s) 257
BsiSI CCGG 1 cut(s) 431
BslFI GGGAC 3 cut(s) 836, 1253, 1359
BslI CCNNNNNNNGG 2 cut(s) 956, 1013
BsmAI GTCTC 2 cut(s) 302, 430
BsmBI CGTCTC 1 cut(s) 302
BsmFI GGGAC 3 cut(s) 836, 1253, 1359
BsnI GGCC 4 cut(s) 239, 630, 1063, 1138
Bso31I GGTCTC 1 cut(s) 430
BsoBI CYCGRG 1 cut(s) 257
Bsp119I TTCGAA 2 cut(s) 532, 607
Bsp1286I GDGCHC 2 cut(s) 558, 703
Bsp143I GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
Bsp19I CCATGG 1 cut(s) 129
BspANI GGCC 4 cut(s) 239, 630, 1063, 1138
BspCNI CTCAG 2 cut(s) 312, 570
BspDI ATCGAT 1 cut(s) 28
BspLI GGNNCC 3 cut(s) 426, 702, 1005
BspMI ACCTGC 3 cut(s) 391, 790, 1216
BspOI GCTAGC 1 cut(s) 567
BspPI GGATC 6 cut(s) 419, 432, 460, 998, 1011, 1153
BspQI GCTCTTC 1 cut(s) 14
BspT104I TTCGAA 2 cut(s) 532, 607
BspT107I GGYRCC 1 cut(s) 700
BspTNI GGTCTC 1 cut(s) 430
BsrDI GCAATG 1 cut(s) 631
BsrI ACTGG 3 cut(s) 854, 880, 1064
BssECI CCNNGG 3 cut(s) 129, 596, 1306
BssMI GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
BssT1I CCWWGG 3 cut(s) 129, 596, 1306
Bst2UI CCWGG 1 cut(s) 1356
Bst4CI ACNGT 2 cut(s) 267, 975
Bst6I CTCTTC 3 cut(s) 14, 180, 604
BstAPI GCANNNNNTGC 1 cut(s) 553
BstBI TTCGAA 2 cut(s) 532, 607
BstC8I GCNNGC 5 cut(s) 318, 565, 639, 685, 1099
BstDEI CTNAG 2 cut(s) 299, 557
BstDSI CCRYGG 1 cut(s) 129
BstF5I GGATG 3 cut(s) 394, 1285, 1302
BstKTI GATC 9 cut(s) 352, 394, 427, 468, 664, 775, 1006, 1148, 1285
BstMAI GTCTC 2 cut(s) 302, 430
BstMBI GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
BstMWI GCNNNNNNNGC 4 cut(s) 131, 553, 869, 935
BstNI CCWGG 1 cut(s) 1356
BstNSI RCATGY 2 cut(s) 605, 641
BstSCI CCNGG 1 cut(s) 1354
BstSLI GKGCMC 1 cut(s) 703
BstV1I GCAGC 3 cut(s) 137, 153, 925
BstV2I GAAGAC 1 cut(s) 61
BstX2I RGATCY 3 cut(s) 424, 1003, 1145
BstYI RGATCY 3 cut(s) 424, 1003, 1145
Bsu15I ATCGAT 1 cut(s) 28
BsuI GTATCC 1 cut(s) 1049
BsuRI GGCC 4 cut(s) 239, 630, 1063, 1138
BsuTUI ATCGAT 1 cut(s) 28
BtgI CCRYGG 1 cut(s) 129
BtrI CACGTC 1 cut(s) 553
BtsCI GGATG 3 cut(s) 394, 1285, 1302
BtsI GCAGTG 1 cut(s) 1152
BtsIMutI CAGTG 1 cut(s) 1152
BveI ACCTGC 3 cut(s) 391, 790, 1216
Cac8I GCNNGC 5 cut(s) 318, 565, 639, 685, 1099
Cfr13I GGNCC 1 cut(s) 1352
ClaI ATCGAT 1 cut(s) 28
Csp6I GTAC 1 cut(s) 1106
CviAII CATG 9 cut(s) 130, 286, 463, 470, 602, 632, 638, 1013, 1102
CviQI GTAC 1 cut(s) 1106
DdeI CTNAG 2 cut(s) 299, 557
DpnI GATC 9 cut(s) 351, 393, 426, 467, 663, 774, 1005, 1147, 1284
DpnII GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
DriI GACNNNNNGTC 1 cut(s) 918
EaeI YGGCCR 3 cut(s) 237, 628, 1061
Eam1104I CTCTTC 3 cut(s) 14, 180, 604
Eam1105I GACNNNNNGTC 1 cut(s) 918
EarI CTCTTC 3 cut(s) 14, 180, 604
Eco130I CCWWGG 3 cut(s) 129, 596, 1306
Eco147I AGGCCT 1 cut(s) 1138
Eco31I GGTCTC 1 cut(s) 430
Eco47I GGWCC 1 cut(s) 1352
Eco57I CTGAAG 1 cut(s) 840
Eco88I CYCGRG 1 cut(s) 257
EcoRI GAATTC 1 cut(s) 725
EcoRII CCWGG 1 cut(s) 1354
EcoT14I CCWWGG 3 cut(s) 129, 596, 1306
ErhI CCWWGG 3 cut(s) 129, 596, 1306
Esp3I CGTCTC 1 cut(s) 302
FaeI CATG 9 cut(s) 133, 289, 466, 473, 605, 635, 641, 1016, 1105
FaqI GGGAC 3 cut(s) 836, 1253, 1359
FatI CATG 9 cut(s) 129, 285, 462, 469, 601, 631, 637, 1012, 1101
FbaI TGATCA 1 cut(s) 391
Fnu4HI GCNGC 3 cut(s) 126, 142, 939
FokI GGATG 3 cut(s) 381, 1272, 1289
Fsp4HI GCNGC 3 cut(s) 126, 142, 939
FspBI CTAG 6 cut(s) 138, 459, 564, 621, 834, 1049
GluI GCNGC 3 cut(s) 126, 142, 939
HaeIII GGCC 4 cut(s) 239, 630, 1063, 1138
HapII CCGG 1 cut(s) 431
Hin1II CATG 9 cut(s) 133, 289, 466, 473, 605, 635, 641, 1016, 1105
HindIII AAGCTT 1 cut(s) 1203
HinfI GANTC 7 cut(s) 89, 306, 337, 523, 529, 715, 837
HpaII CCGG 1 cut(s) 431
HphI GGTGA 3 cut(s) 359, 368, 585
Hpy166II GTNNAC 6 cut(s) 77, 223, 367, 971, 1077, 1129
Hpy188I TCNGA 9 cut(s) 232, 246, 302, 336, 528, 560, 859, 912, 951
Hpy188III TCNNGA 4 cut(s) 257, 325, 341, 1143
Hpy8I GTNNAC 6 cut(s) 77, 223, 367, 971, 1077, 1129
Hpy99I CGWCG 3 cut(s) 11, 579, 773
HpyAV CCTTC 5 cut(s) 200, 283, 994, 1149, 1184
HpyCH4III ACNGT 2 cut(s) 267, 975
HpyCH4IV ACGT 2 cut(s) 73, 552
HpyCH4V TGCA 5 cut(s) 641, 941, 1157, 1184, 1225
HpyF10VI GCNNNNNNNGC 4 cut(s) 131, 553, 869, 935
HpyF3I CTNAG 2 cut(s) 299, 557
HpySE526I ACGT 2 cut(s) 73, 552
Hsp92II CATG 9 cut(s) 133, 289, 466, 473, 605, 635, 641, 1016, 1105
Ksp22I TGATCA 1 cut(s) 391
Kzo9I GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
LguI GCTCTTC 1 cut(s) 14
LmnI GCTCC 3 cut(s) 489, 674, 935
Lsp1109I GCAGC 3 cut(s) 137, 153, 925
LweI GCATC 2 cut(s) 696, 850
MaeI CTAG 6 cut(s) 138, 459, 564, 621, 834, 1049
MaeII ACGT 2 cut(s) 73, 552
MaeIII GTNAC 1 cut(s) 959
MalI GATC 9 cut(s) 351, 393, 426, 467, 663, 774, 1005, 1147, 1284
MboI GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
MflI RGATCY 3 cut(s) 424, 1003, 1145
MhlI GDGCHC 2 cut(s) 558, 703
MlsI TGGCCA 3 cut(s) 239, 630, 1063
MluNI TGGCCA 3 cut(s) 239, 630, 1063
MlyI GAGTC 1 cut(s) 346
MmeI TCCRAC 2 cut(s) 974, 1033
MnlI CCTC 8 cut(s) 169, 183, 238, 332, 408, 1277, 1304, 1362
Mox20I TGGCCA 3 cut(s) 239, 630, 1063
MroXI GAANNNNTTC 1 cut(s) 477
MscI TGGCCA 3 cut(s) 239, 630, 1063
MseI TTAA 4 cut(s) 269, 404, 450, 1317
MslI CAYNNNNRTG 2 cut(s) 461, 636
Msp20I TGGCCA 3 cut(s) 239, 630, 1063
MspA1I CMGCKG 1 cut(s) 144
MspI CCGG 1 cut(s) 431
MspR9I CCNGG 1 cut(s) 1356
MvaI CCWGG 1 cut(s) 1356
MwoI GCNNNNNNNGC 4 cut(s) 131, 553, 869, 935
NcoI CCATGG 1 cut(s) 129
NdeII GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
NheI GCTAGC 1 cut(s) 563
NlaIII CATG 9 cut(s) 133, 289, 466, 473, 605, 635, 641, 1016, 1105
NlaIV GGNNCC 3 cut(s) 426, 702, 1005
NspI RCATGY 2 cut(s) 605, 641
NspV TTCGAA 2 cut(s) 532, 607
PaeI GCATGC 1 cut(s) 641
PceI AGGCCT 1 cut(s) 1138
PciSI GCTCTTC 1 cut(s) 14
PdmI GAANNNNTTC 1 cut(s) 477
PfeI GAWTC 6 cut(s) 89, 306, 523, 529, 715, 837
PflMI CCANNNNNTGG 1 cut(s) 1013
PfoI TCCNGGA 1 cut(s) 1354
PkrI GCNGC 3 cut(s) 127, 143, 940
PleI GAGTC 1 cut(s) 345
PpsI GAGTC 1 cut(s) 345
Psp6I CCWGG 1 cut(s) 1354
PspGI CCWGG 1 cut(s) 1354
PspN4I GGNNCC 3 cut(s) 426, 702, 1005
PspPI GGNCC 1 cut(s) 1352
PsuI RGATCY 3 cut(s) 424, 1003, 1145
PvuII CAGCTG 1 cut(s) 144
RsaI GTAC 1 cut(s) 1107
RsaNI GTAC 1 cut(s) 1106
RseI CAYNNNNRTG 2 cut(s) 461, 636
SapI GCTCTTC 1 cut(s) 14
SaqAI TTAA 4 cut(s) 269, 404, 450, 1317
SatI GCNGC 3 cut(s) 126, 142, 939
Sau3AI GATC 9 cut(s) 349, 391, 424, 465, 661, 772, 1003, 1145, 1282
Sau96I GGNCC 1 cut(s) 1352
SchI GAGTC 1 cut(s) 346
ScrFI CCNGG 1 cut(s) 1356
SduI GDGCHC 2 cut(s) 558, 703
SfaNI GCATC 2 cut(s) 696, 850
SfuI TTCGAA 2 cut(s) 532, 607
SinI GGWCC 1 cut(s) 1352
SmiMI CAYNNNNRTG 2 cut(s) 461, 636
SmlI CTYRAG 2 cut(s) 323, 1132
SmoI CTYRAG 2 cut(s) 323, 1132
SphI GCATGC 1 cut(s) 641
SseBI AGGCCT 1 cut(s) 1138
SspMI CTAG 6 cut(s) 138, 459, 564, 621, 834, 1049
StuI AGGCCT 1 cut(s) 1138
StyD4I CCNGG 1 cut(s) 1354
StyI CCWWGG 3 cut(s) 129, 596, 1306
TaaI ACNGT 2 cut(s) 267, 975
TaiI ACGT 2 cut(s) 76, 555
TaqI TCGA 6 cut(s) 28, 400, 532, 574, 607, 922
TfiI GAWTC 6 cut(s) 89, 306, 523, 529, 715, 837
Tru1I TTAA 4 cut(s) 269, 404, 450, 1317
Tru9I TTAA 4 cut(s) 269, 404, 450, 1317
TscAI CASTG 1 cut(s) 1159
TseI GCWGC 3 cut(s) 125, 141, 938
TspDTI ATGAA 4 cut(s) 302, 486, 738, 750
TspGWI ACGGA 1 cut(s) 597
TspRI CASTG 1 cut(s) 1159
Van91I CCANNNNNTGG 1 cut(s) 1013
VpaK11BI GGWCC 1 cut(s) 1352
XapI RAATTY 4 cut(s) 115, 475, 725, 1031
XceI RCATGY 2 cut(s) 605, 641
XmnI GAANNNNTTC 1 cut(s) 477
XspI CTAG 6 cut(s) 138, 459, 564, 621, 834, 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.