MD16G1097900.v1.1

Neprosin

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
6857404 .. 6862056
4653 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1097900.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGGTCACCATGTATTGGATACTGGATTTGGTGGGAGCTGAGCTTCCATGGACAAAAAATAGCACCAATATTTTACACTGCAAATATCATGACTACAGAAGAAGACAATACCAACAACAACAACAACAAGAGGATTCAACAAAAGCAAAAAAACAAGAAAACTTCTCAAGCAATATGGCTTGTAGCTACTCCAAGATTTCCCCAATCATTCCCATTGTTATTTGCTTCCTTCTTGTTGCTTCTTCAATGTGTCCGGTAGCACAATCTTCCGATATCCGCCGTGAAACCGCCGCCAATCAGACATTGAAGCCGGAGCAAGAATTGAAAAGGTTGAAGATTATAAGAGCTCGTCTTAACAAGATCAACAAGCCTGCTCTCAAGACATTTCAGAGTCCGGATGGCGATCTTATAGATTGTGTTCTCTCTCATCACCAACCAGCTTTCGATCATCCCCAGTTAAAAGGACAGAAGCCATTGGATCCGCCGGAGAGACCGAAAGGCCAAAACCCTCCAGGAATGGCCGCTGAAAATTACCAGCTGTGGAGCATGTCAGGAAATCTCTGCCCAGAAGGAACACTTCCAATTAGAAGAACAAGAGAGGAAGATATGATGAGAGCCAGCTCTGTTAGAAGATTTGGAAGAAAACTAAGAAGGCATGTCAGAAGAGATACATCCAGTAATGGCCATGAGCATGCAGTTGGGTATGTGAGTGGAGACCAATACTATGGAGCCAAAGCTAGTATCAATGTGTGGGCCCCCAAAGTTGTTAATCAATATGAATTCAGCTTGTCTCAGATGTGGGTCATCTCTGGTTCATTTGGTGATGACCTCAACACCATTGAAGCTGGTTGGCAGGTCAGTCCAGAGCTGTATGGGGACAACTACCCTAGATTCTTTACTTATTGGACTACGGATGCATATCAAGCAACTGGATGCTACAATTTACTGTGTTCTGGATTTGTTCAGACCAATAGTAGAATTGCCATTGGAGCTGCAATTTCTCCAACTTCTTCCTACCATGGAGGACAATTTGATATTAGCTTGTTAATTTGGAAGGATCCAAAGCATGGAAATTGGTGGCTGGAATTCGGGAACGGAGTCCTAGTCGGATACTGGCCATCATTCTTGTTCACTCACCTTCAAAACCACGCAAGCATGGTACAATTTGGTGGAGAAGTTGTGAACTCGAGGCCTTCAGGCTCCCACACAGCCACACAGATGGGCAGTGGGCACTTTGCAGGTGAAGGGTTTGGAAAAGCTTCATATTTTCGAAACATGCAGGTTGTGGATTGGGATAATAGCTTAATCCCATTATCCAACCTCAAAGTTTTGGCTGATCATCCAAATTGCTATGACATTCAAGGGGGGATTAACAACGTTTGGGGGAATTATTTTTACTATGGAGGTCCTGGAAGAAATGTGAGGTGTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

478

Amino Acids

53.92

Weight (kDa)

8.85

Isoelectric Point (pI)

40.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neprosin_AP PF14365 128 - 235 1e-35 Neprosin activation peptide
Neprosin PF03080 259 - 470 4.1e-87 Neprosin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 341
AarI CACCTGC 1 cut(s) 1229
Acc36I ACCTGC 3 cut(s) 844, 1229, 1270
AccB7I CCANNNNNTGG 2 cut(s) 15, 1067
AccIII TCCGGA 1 cut(s) 394
AciI CCGC 5 cut(s) 277, 288, 291, 482, 522
AclI AACGTT 1 cut(s) 1377
AclWI GGATC 4 cut(s) 473, 486, 1052, 1065
AcoI YGGCCR 3 cut(s) 519, 682, 1115
AcsI RAATTY 2 cut(s) 779, 1085
AcuI CTGAAG 1 cut(s) 1179
AfaI GTAC 1 cut(s) 1161
AfiI CCNNNNNNNGG 2 cut(s) 15, 1067
AgsI TTSAA 8 cut(s) 138, 246, 307, 325, 334, 842, 1142, 1361
AjnI CCWGG 2 cut(s) 511, 1408
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 3 cut(s) 484, 708, 795
AlwI GGATC 4 cut(s) 473, 486, 1052, 1065
Ama87I CYCGRG 1 cut(s) 1186
Aor13HI TCCGGA 1 cut(s) 394
AoxI GGCC 6 cut(s) 499, 519, 682, 753, 1115, 1190
ApaI GGGCCC 1 cut(s) 757
ApeKI GCWGC 1 cut(s) 992
ApoI RAATTY 2 cut(s) 779, 1085
Asp700I GAANNNNTTC 1 cut(s) 1258
AspS9I GGNCC 3 cut(s) 753, 754, 1406
AsuHPI GGTGA 4 cut(s) 422, 833, 1127, 1253
AsuII TTCGAA 1 cut(s) 1270
AvaI CYCGRG 1 cut(s) 1186
AvaII GGWCC 1 cut(s) 1406
BaeGI GKGCMC 2 cut(s) 757, 1233
BalI TGGCCA 2 cut(s) 684, 1117
BamHI GGATCC 2 cut(s) 478, 1057
BanII GRGCYC 2 cut(s) 349, 757
BbsI GAAGAC 1 cut(s) 109
Bbv12I GWGCWC 1 cut(s) 349
BbvI GCAGC 1 cut(s) 979
BccI CCATC 3 cut(s) 392, 1126, 1213
BceAI ACGGC 1 cut(s) 264
BciT130I CCWGG 2 cut(s) 513, 1410
BciVI GTATCC 2 cut(s) 12, 1103
BclI TGATCA 1 cut(s) 1336
BcoDI GTCTC 3 cut(s) 484, 708, 795
BfaI CTAG 3 cut(s) 738, 888, 1103
BfmI CTRYAG 1 cut(s) 94
BfuAI ACCTGC 3 cut(s) 844, 1229, 1270
BfuI GTATCC 2 cut(s) 12, 1103
BisI GCNGC 3 cut(s) 291, 522, 993
BlpI GCTNAGC 1 cut(s) 39
BlsI GCNGC 3 cut(s) 292, 523, 994
Bme1390I CCNGG 2 cut(s) 513, 1410
Bme18I GGWCC 1 cut(s) 1406
BmeT110I CYCGRG 1 cut(s) 1186
BmgT120I GGNCC 3 cut(s) 753, 754, 1406
BmiI GGNNCC 6 cut(s) 480, 730, 755, 756, 1059, 1201
BmrFI CCNGG 2 cut(s) 513, 1410
BmrI ACTGGG 1 cut(s) 448
BmsI GCATC 2 cut(s) 904, 923
BmuI ACTGGG 1 cut(s) 448
BpiI GAAGAC 1 cut(s) 109
BpmI CTGGAG 1 cut(s) 495
Bpu1102I GCTNAGC 1 cut(s) 39
Bpu14I TTCGAA 1 cut(s) 1270
BpuEI CTTGAG 2 cut(s) 151, 362
BsaBI GATNNNNATC 2 cut(s) 402, 918
BsaI GGTCTC 2 cut(s) 484, 708
BsaJI CCNNGG 2 cut(s) 47, 1018
BsaWI WCCGGW 2 cut(s) 253, 394
BsaXI ACNNNNNCTCC 4 cut(s) 1089, 1119, 1164, 1194
Bsc4I CCNNNNNNNGG 2 cut(s) 15, 1067
Bse1I ACTGG 5 cut(s) 27, 454, 675, 934, 1118
Bse8I GATNNNNATC 2 cut(s) 402, 918
BseAI TCCGGA 1 cut(s) 394
BseBI CCWGG 2 cut(s) 513, 1410
BseDI CCNNGG 2 cut(s) 47, 1018
BseGI GGATG 6 cut(s) 403, 448, 671, 919, 938, 1339
BseJI GATNNNNATC 2 cut(s) 402, 918
BseLI CCNNNNNNNGG 2 cut(s) 15, 1067
BseMII CTCAG 2 cut(s) 30, 806
BseNI ACTGG 5 cut(s) 27, 454, 675, 934, 1118
BseSI GKGCMC 2 cut(s) 757, 1233
BseXI GCAGC 1 cut(s) 979
BshFI GGCC 6 cut(s) 501, 521, 684, 755, 1117, 1192
BsiHKAI GWGCWC 1 cut(s) 349
BsiHKCI CYCGRG 1 cut(s) 1186
BsiSI CCGG 4 cut(s) 254, 311, 395, 485
BslFI GGGAC 2 cut(s) 890, 1413
BslI CCNNNNNNNGG 2 cut(s) 15, 1067
BsmAI GTCTC 3 cut(s) 484, 708, 795
BsmFI GGGAC 2 cut(s) 890, 1413
BsnI GGCC 6 cut(s) 501, 521, 684, 755, 1117, 1192
Bso31I GGTCTC 2 cut(s) 484, 708
BsoBI CYCGRG 1 cut(s) 1186
Bsp119I TTCGAA 1 cut(s) 1270
Bsp120I GGGCCC 1 cut(s) 753
Bsp1286I GDGCHC 3 cut(s) 349, 757, 1233
Bsp13I TCCGGA 1 cut(s) 394
Bsp143I GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
Bsp1720I GCTNAGC 1 cut(s) 39
Bsp19I CCATGG 2 cut(s) 47, 1018
BspACI CCGC 5 cut(s) 277, 288, 291, 482, 522
BspANI GGCC 6 cut(s) 501, 521, 684, 755, 1117, 1192
BspCNI CTCAG 2 cut(s) 31, 805
BspEI TCCGGA 1 cut(s) 394
BspHI TCATGA 1 cut(s) 88
BspLI GGNNCC 6 cut(s) 480, 730, 755, 756, 1059, 1201
BspMI ACCTGC 3 cut(s) 844, 1229, 1270
BspPI GGATC 4 cut(s) 473, 486, 1052, 1065
BspT104I TTCGAA 1 cut(s) 1270
BspTNI GGTCTC 2 cut(s) 484, 708
BsrI ACTGG 5 cut(s) 27, 454, 675, 934, 1118
BssECI CCNNGG 2 cut(s) 47, 1018
BssMI GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
BssT1I CCWWGG 2 cut(s) 47, 1018
Bst2UI CCWGG 2 cut(s) 513, 1410
Bst4CI ACNGT 1 cut(s) 948
Bst6I CTCTTC 1 cut(s) 658
BstBI TTCGAA 1 cut(s) 1270
BstC8I GCNNGC 4 cut(s) 372, 619, 693, 1153
BstDEI CTNAG 3 cut(s) 39, 647, 792
BstDSI CCRYGG 2 cut(s) 47, 1018
BstEII GGTNACC 1 cut(s) 4
BstF5I GGATG 6 cut(s) 403, 448, 671, 919, 938, 1339
BstKTI GATC 6 cut(s) 363, 406, 448, 481, 1060, 1339
BstMAI GTCTC 3 cut(s) 484, 708, 795
BstMBI GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
BstMWI GCNNNNNNNGC 2 cut(s) 923, 989
BstNI CCWGG 2 cut(s) 513, 1410
BstNSI RCATGY 4 cut(s) 550, 659, 695, 1279
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 2 cut(s) 511, 1408
BstSFI CTRYAG 1 cut(s) 94
BstSLI GKGCMC 2 cut(s) 757, 1233
BstV1I GCAGC 1 cut(s) 979
BstV2I GAAGAC 1 cut(s) 109
BstX2I RGATCY 2 cut(s) 478, 1057
BstXI CCANNNNNNTGG 2 cut(s) 725, 1219
BstYI RGATCY 2 cut(s) 478, 1057
BsuI GTATCC 2 cut(s) 12, 1103
BsuRI GGCC 6 cut(s) 501, 521, 684, 755, 1117, 1192
BtgI CCRYGG 2 cut(s) 47, 1018
BtsCI GGATG 6 cut(s) 403, 448, 671, 919, 938, 1339
BtsI GCAGTG 2 cut(s) 76, 1231
BtsIMutI CAGTG 2 cut(s) 76, 1231
BveI ACCTGC 3 cut(s) 844, 1229, 1270
Cac8I GCNNGC 4 cut(s) 372, 619, 693, 1153
CciI TCATGA 1 cut(s) 88
Cfr13I GGNCC 3 cut(s) 753, 754, 1406
Csp6I GTAC 1 cut(s) 1160
CviQI GTAC 1 cut(s) 1160
DdeI CTNAG 3 cut(s) 39, 647, 792
DpnI GATC 6 cut(s) 362, 405, 447, 480, 1059, 1338
DpnII GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
EaeI YGGCCR 3 cut(s) 519, 682, 1115
Eam1104I CTCTTC 1 cut(s) 658
EarI CTCTTC 1 cut(s) 658
EciI GGCGGA 2 cut(s) 266, 471
Ecl136II GAGCTC 1 cut(s) 347
Eco130I CCWWGG 2 cut(s) 47, 1018
Eco147I AGGCCT 1 cut(s) 1192
Eco24I GRGCYC 2 cut(s) 349, 757
Eco31I GGTCTC 2 cut(s) 484, 708
Eco32I GATATC 1 cut(s) 274
Eco47I GGWCC 1 cut(s) 1406
Eco53kI GAGCTC 1 cut(s) 347
Eco57I CTGAAG 1 cut(s) 1179
Eco88I CYCGRG 1 cut(s) 1186
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 347
EcoO109I RGGNCCY 2 cut(s) 754, 1406
EcoO65I GGTNACC 1 cut(s) 4
EcoRI GAATTC 2 cut(s) 779, 1085
EcoRII CCWGG 2 cut(s) 511, 1408
EcoRV GATATC 1 cut(s) 274
EcoT14I CCWWGG 2 cut(s) 47, 1018
EcoT22I ATGCAT 1 cut(s) 919
EcoT38I GRGCYC 2 cut(s) 349, 757
ErhI CCWWGG 2 cut(s) 47, 1018
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FaqI GGGAC 2 cut(s) 890, 1413
FbaI TGATCA 1 cut(s) 1336
Fnu4HI GCNGC 3 cut(s) 291, 522, 993
FokI GGATG 6 cut(s) 410, 435, 658, 926, 945, 1326
FriOI GRGCYC 2 cut(s) 349, 757
Fsp4HI GCNGC 3 cut(s) 291, 522, 993
FspBI CTAG 3 cut(s) 738, 888, 1103
GluI GCNGC 3 cut(s) 291, 522, 993
GsuI CTGGAG 1 cut(s) 495
HaeIII GGCC 6 cut(s) 501, 521, 684, 755, 1117, 1192
HapII CCGG 4 cut(s) 254, 311, 395, 485
HindIII AAGCTT 1 cut(s) 1257
HinfI GANTC 4 cut(s) 134, 391, 891, 1098
HpaII CCGG 4 cut(s) 254, 311, 395, 485
HphI GGTGA 4 cut(s) 422, 833, 1127, 1253
Hpy166II GTNNAC 2 cut(s) 1131, 1183
Hpy188I TCNGA 7 cut(s) 271, 300, 390, 662, 795, 966, 1109
Hpy188III TCNNGA 7 cut(s) 89, 379, 395, 552, 863, 954, 1090
Hpy8I GTNNAC 2 cut(s) 1131, 1183
HpyAV CCTTC 7 cut(s) 239, 563, 645, 1048, 1148, 1203, 1238
HpyCH4III ACNGT 1 cut(s) 948
HpyCH4IV ACGT 1 cut(s) 1377
HpyCH4V TGCA 6 cut(s) 81, 695, 917, 995, 1238, 1279
HpyF10VI GCNNNNNNNGC 2 cut(s) 923, 989
HpyF3I CTNAG 3 cut(s) 39, 647, 792
HpySE526I ACGT 1 cut(s) 1377
Kpn2I TCCGGA 1 cut(s) 394
Ksp22I TGATCA 1 cut(s) 1336
Kzo9I GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
LmnI GCTCC 6 cut(s) 35, 313, 543, 728, 989, 1205
Lsp1109I GCAGC 1 cut(s) 979
LweI GCATC 2 cut(s) 904, 923
MaeI CTAG 3 cut(s) 738, 888, 1103
MaeII ACGT 1 cut(s) 1377
MaeIII GTNAC 1 cut(s) 4
MalI GATC 6 cut(s) 362, 405, 447, 480, 1059, 1338
MboI GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
MflI RGATCY 2 cut(s) 478, 1057
MhlI GDGCHC 3 cut(s) 349, 757, 1233
MlsI TGGCCA 2 cut(s) 684, 1117
MluNI TGGCCA 2 cut(s) 684, 1117
MlyI GAGTC 2 cut(s) 400, 1107
MmeI TCCRAC 3 cut(s) 1028, 1087, 1341
MnlI CCTC 9 cut(s) 124, 519, 592, 839, 1016, 1182, 1331, 1397, 1416
Mox20I TGGCCA 2 cut(s) 684, 1117
Mph1103I ATGCAT 1 cut(s) 919
MroI TCCGGA 1 cut(s) 394
MroXI GAANNNNTTC 1 cut(s) 1258
MscI TGGCCA 2 cut(s) 684, 1117
MseI TTAA 6 cut(s) 354, 458, 768, 1046, 1304, 1371
MslI CAYNNNNRTG 2 cut(s) 690, 1217
Msp20I TGGCCA 2 cut(s) 684, 1117
MspA1I CMGCKG 2 cut(s) 524, 538
MspI CCGG 4 cut(s) 254, 311, 395, 485
MspR9I CCNGG 2 cut(s) 513, 1410
MvaI CCWGG 2 cut(s) 513, 1410
MwoI GCNNNNNNNGC 2 cut(s) 923, 989
NcoI CCATGG 2 cut(s) 47, 1018
NdeII GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
NlaIV GGNNCC 6 cut(s) 480, 730, 755, 756, 1059, 1201
NmuCI GTSAC 1 cut(s) 4
NsiI ATGCAT 1 cut(s) 919
NspI RCATGY 4 cut(s) 550, 659, 695, 1279
NspV TTCGAA 1 cut(s) 1270
PaeI GCATGC 1 cut(s) 695
PaeR7I CTCGAG 1 cut(s) 1186
PagI TCATGA 1 cut(s) 88
PaqCI CACCTGC 1 cut(s) 1229
PceI AGGCCT 1 cut(s) 1192
PdmI GAANNNNTTC 1 cut(s) 1258
PfeI GAWTC 2 cut(s) 134, 891
PflMI CCANNNNNTGG 2 cut(s) 15, 1067
PfoI TCCNGGA 2 cut(s) 511, 1408
PkrI GCNGC 3 cut(s) 292, 523, 994
PleI GAGTC 2 cut(s) 399, 1106
PpsI GAGTC 2 cut(s) 399, 1106
PpuMI RGGWCCY 1 cut(s) 1406
PsiI TTATAA 1 cut(s) 341
Psp124BI GAGCTC 1 cut(s) 349
Psp1406I AACGTT 1 cut(s) 1377
Psp5II RGGWCCY 1 cut(s) 1406
Psp6I CCWGG 2 cut(s) 511, 1408
PspEI GGTNACC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 511, 1408
PspN4I GGNNCC 6 cut(s) 480, 730, 755, 756, 1059, 1201
PspOMI GGGCCC 1 cut(s) 753
PspPI GGNCC 3 cut(s) 753, 754, 1406
PspPPI RGGWCCY 1 cut(s) 1406
PspXI VCTCGAGB 1 cut(s) 1186
PsuI RGATCY 2 cut(s) 478, 1057
PvuII CAGCTG 1 cut(s) 538
RsaI GTAC 1 cut(s) 1161
RsaNI GTAC 1 cut(s) 1160
RseI CAYNNNNRTG 2 cut(s) 690, 1217
SacI GAGCTC 1 cut(s) 349
SaqAI TTAA 6 cut(s) 354, 458, 768, 1046, 1304, 1371
SatI GCNGC 3 cut(s) 291, 522, 993
Sau3AI GATC 6 cut(s) 360, 403, 445, 478, 1057, 1336
Sau96I GGNCC 3 cut(s) 753, 754, 1406
SchI GAGTC 2 cut(s) 400, 1107
ScrFI CCNGG 2 cut(s) 513, 1410
SduI GDGCHC 3 cut(s) 349, 757, 1233
SfaNI GCATC 2 cut(s) 904, 923
SfcI CTRYAG 1 cut(s) 94
Sfr274I CTCGAG 1 cut(s) 1186
SfuI TTCGAA 1 cut(s) 1270
SinI GGWCC 1 cut(s) 1406
SlaI CTCGAG 1 cut(s) 1186
SmiMI CAYNNNNRTG 2 cut(s) 690, 1217
SmlI CTYRAG 3 cut(s) 166, 377, 1186
SmoI CTYRAG 3 cut(s) 166, 377, 1186
SphI GCATGC 1 cut(s) 695
SseBI AGGCCT 1 cut(s) 1192
SsiI CCGC 5 cut(s) 277, 288, 291, 482, 522
SspI AATATT 1 cut(s) 70
SspMI CTAG 3 cut(s) 738, 888, 1103
SstI GAGCTC 1 cut(s) 349
StuI AGGCCT 1 cut(s) 1192
StyD4I CCNGG 2 cut(s) 511, 1408
StyI CCWWGG 2 cut(s) 47, 1018
TaaI ACNGT 1 cut(s) 948
TaiI ACGT 1 cut(s) 1380
TaqI TCGA 3 cut(s) 444, 1187, 1270
TaqII GACCGA 1 cut(s) 508
TauI GCSGC 2 cut(s) 293, 524
TfiI GAWTC 2 cut(s) 134, 891
Tru1I TTAA 6 cut(s) 354, 458, 768, 1046, 1304, 1371
Tru9I TTAA 6 cut(s) 354, 458, 768, 1046, 1304, 1371
TscAI CASTG 2 cut(s) 83, 1231
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 1 cut(s) 992
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 3 cut(s) 792, 804, 1251
TspGWI ACGGA 2 cut(s) 926, 1110
TspRI CASTG 2 cut(s) 83, 1231
Van91I CCANNNNNTGG 2 cut(s) 15, 1067
VpaK11BI GGWCC 1 cut(s) 1406
XapI RAATTY 2 cut(s) 779, 1085
XceI RCATGY 4 cut(s) 550, 659, 695, 1279
XhoI CTCGAG 1 cut(s) 1186
XmnI GAANNNNTTC 1 cut(s) 1258
XspI CTAG 3 cut(s) 738, 888, 1103
Zsp2I ATGCAT 1 cut(s) 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.