AT1G11670

Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
3928115 .. 3931701
3587 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G11670.1

Sequence Viewer

Length: 1512 bp
ATGGGTTCGGAAGCGACCACCGCCGTGAACAACCTTCAGCAACCGTTACTGGAGTCAACAAAATCAGAAGCTGACTTCAGGATGGAGAGTGTATTAACGGACACACACTTGTCATATTTTCGGCGGATCTACCTTGCGTCGTTGATCGAGATGAAGTACCTTTTCCACTTGGCGGCTCCGGCGATCTTTGTCTACGTCATCAACAATGGCATGTCTATGCTCACTCGTATCTTCGCTGGTCGTTTGGGAAGTATGCAACTCGCTGCCGCTTCTCTAGGAAACAGCGGTTTCAATATGTTCACTCTTGGTCTCATGCTTGGAATGGGAAGTGCAGTGGAGACATTATGTGGGCAAGCGCATGGAGCTCATAGATACGACATGCTTGGAGTCTACTTACAAAGATCCACGATTGTTCTTGTCATAACCGGACTTCCAATGACTTTACTCTTCATCTTCTCAAAACCTCTCCTCATTTCCTTAGGCGAGCCAGCTGACGTAGCATCAGTGGCATCAGTATTCGTCTACGGTATGATCCCAATGATCTTCGCTTACGCCGTCAACTTCCCCATCCAAAAGTTTCTCCAGTCGCAAAGCATCGTCACGCCGAGTGCTTATATCTCAGCCGCAACACTAGTCATCCACTTAATCCTCTCTTGGCTCTCTGTCTTTAAGTTTGGTTGGGGCTTACTTGGTCTCTCCGTTGTTCATAGTCTCTCGTGGTGGATCATTGTCCTCGCTCAGATTATTTACATTAAGATAAGTCCAAGATGTCGCCGGACTTGGGATGGTTTTAGTTGGAAAGCTTTTGATGGTCTTTGGGACTTTTTCCAGTTATCCGCAGCTTCCGCCGTCATGCTCTGCCTTGAATCTTGGTACTCTCAGATTCTTGTTCTCCTCGCCGGACTTCTTAAAGACCCTGAACTTGCTTTGGATTCTCTAGCAATCTGCATGTCAATCTCTGCAATGTCGTTCATGGTGTCAGTTGGATTCAACGCAGCTGCCAGTGTGAGAGTTAGTAACGAATTAGGTGCTGGAAATCCAAGATCAGCAGCATTTTCAACCGCGGTAACTACAGGAGTGTCATTTTTACTGTCATTGTTTGAAGCCATCGTGATCCTCTCGTGGCGACATGTCATCAGTTACATTTTTACGGATAGTCCAGCGGTTGCGGAAGCCGTCGCCGAGCTCTCTCCTTTCTTAGCCATTACCATAGTTCTCAATGGAGTTCAACCTGTTTTATCTGGTGTGGCCGTTGGATGTGGATGGCAAGCATATGTAGCTTACGTTAACATTGGATGTTATTACATTGTGGGGATTCCGATTGGTTATGTTCTTGGTTTCACCTATGATATGGGAGCTAGGGGAATATGGACAGGGATGATTGGTGGCACACTCATGCAAACTATTATCTTGGTCATTGTCACATTCCGAACCGATTGGGATAAAGAGGTGGAGAAGGCTTCGAGACGATTGGACCAGTGGGAGGACACATCTCCGCTTCTTAAGCAATAA

Protein Analysis

503

Amino Acids

54.99

Weight (kDa)

6.17

Isoelectric Point (pI)

32.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MatE PF01554 60 - 220 2.8e-37 MatE
MatE PF01554 282 - 444 9.3e-34 MatE
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 192, 390, 522
AccII CGCG 1 cut(s) 1064
AclWI GGATC 5 cut(s) 134, 396, 526, 731, 1108
AcoI YGGCCR 1 cut(s) 1248
AcuI CTGAAG 2 cut(s) 20, 61
AfaI GTAC 2 cut(s) 158, 875
AfiI CCNNNNNNNGG 3 cut(s) 172, 781, 1483
AflII CTTAAG 1 cut(s) 1502
AflIII ACRYGT 1 cut(s) 1129
AgsI TTSAA 6 cut(s) 292, 866, 991, 1059, 1103, 1229
AhlI ACTAGT 1 cut(s) 631
AleI CACNNNNGTG 1 cut(s) 23
AluBI AGCT 9 cut(s) 71, 365, 491, 803, 842, 998, 1186, 1280, 1358
AluI AGCT 9 cut(s) 71, 365, 491, 803, 842, 998, 1186, 1280, 1358
Alw21I GWGCWC 2 cut(s) 367, 1188
Alw26I GTCTC 5 cut(s) 314, 332, 698, 716, 1459
AlwI GGATC 5 cut(s) 134, 396, 526, 731, 1108
AlwNI CAGNNNCTG 1 cut(s) 71
AoxI GGCC 1 cut(s) 1248
ApeKI GCWGC 5 cut(s) 263, 839, 995, 998, 1049
AspLEI GCGC 1 cut(s) 358
AspS9I GGNCC 1 cut(s) 1474
AsuHPI GGTGA 1 cut(s) 1333
AvaII GGWCC 1 cut(s) 1474
AxyI CCTNAGG 1 cut(s) 478
BanII GRGCYC 2 cut(s) 367, 1188
BauI CACGAG 2 cut(s) 715, 1120
Bbv12I GWGCWC 2 cut(s) 367, 1188
BbvI GCAGC 5 cut(s) 250, 851, 985, 1007, 1061
BccI CCATC 6 cut(s) 76, 575, 779, 803, 1115, 1257
BceAI ACGGC 5 cut(s) 8, 539, 833, 1160, 1235
BcgI CGANNNNNNTGC 2 cut(s) 1010, 1044
BcoDI GTCTC 5 cut(s) 314, 332, 698, 716, 1459
BcuI ACTAGT 1 cut(s) 631
BfaI CTAG 4 cut(s) 275, 632, 938, 1359
BfmI CTRYAG 1 cut(s) 1071
BfrI CTTAAG 1 cut(s) 1502
BisI GCNGC 8 cut(s) 174, 264, 267, 624, 840, 996, 999, 1050
BlsI GCNGC 8 cut(s) 175, 265, 268, 625, 841, 997, 1000, 1051
Bme18I GGWCC 1 cut(s) 1474
BmgT120I GGNCC 1 cut(s) 1474
BmiI GGNNCC 1 cut(s) 177
BmsI GCATC 3 cut(s) 509, 518, 603
BpmI CTGGAG 2 cut(s) 71, 566
BsaI GGTCTC 2 cut(s) 314, 698
BsaJI CCNNGG 1 cut(s) 1062
BsaWI WCCGGW 1 cut(s) 425
Bsc4I CCNNNNNNNGG 3 cut(s) 172, 781, 1483
Bse1I ACTGG 5 cut(s) 54, 583, 829, 1002, 1477
Bse21I CCTNAGG 1 cut(s) 478
Bse3DI GCAATG 1 cut(s) 969
BseDI CCNNGG 1 cut(s) 1062
BseGI GGATG 8 cut(s) 87, 567, 636, 790, 1262, 1268, 1301, 1383
BseLI CCNNNNNNNGG 3 cut(s) 172, 781, 1483
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 3 cut(s) 633, 752, 893
BseNI ACTGG 5 cut(s) 54, 583, 829, 1002, 1477
BseRI GAGGAG 2 cut(s) 458, 884
BseXI GCAGC 5 cut(s) 250, 851, 985, 1007, 1061
BsgI GTGCAG 1 cut(s) 351
Bsh1236I CGCG 1 cut(s) 1064
BshFI GGCC 1 cut(s) 1250
BsiHKAI GWGCWC 2 cut(s) 367, 1188
BsiSI CCGG 4 cut(s) 179, 426, 775, 900
BslFI GGGAC 1 cut(s) 833
BslI CCNNNNNNNGG 3 cut(s) 172, 781, 1483
BsmAI GTCTC 5 cut(s) 314, 332, 698, 716, 1459
BsmBI CGTCTC 1 cut(s) 1459
BsmFI GGGAC 1 cut(s) 833
BsnI GGCC 1 cut(s) 1250
Bso31I GGTCTC 2 cut(s) 314, 698
Bsp1286I GDGCHC 2 cut(s) 367, 1188
Bsp143I GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
BspANI GGCC 1 cut(s) 1250
BspCNI CTCAG 3 cut(s) 632, 751, 892
BspFNI CGCG 1 cut(s) 1064
BspLI GGNNCC 1 cut(s) 177
BspPI GGATC 5 cut(s) 134, 396, 526, 731, 1108
BspTI CTTAAG 1 cut(s) 1502
BspTNI GGTCTC 2 cut(s) 314, 698
BsrDI GCAATG 1 cut(s) 969
BsrI ACTGG 5 cut(s) 54, 583, 829, 1002, 1477
BssECI CCNNGG 1 cut(s) 1062
BssMI GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
BssSI CACGAG 2 cut(s) 715, 1120
Bst2BI CACGAG 2 cut(s) 715, 1120
Bst4CI ACNGT 3 cut(s) 45, 527, 1092
Bst6I CTCTTC 1 cut(s) 452
BstAFI CTTAAG 1 cut(s) 1502
BstC8I GCNNGC 4 cut(s) 354, 485, 489, 1269
BstDEI CTNAG 5 cut(s) 478, 619, 738, 879, 1198
BstDSI CCRYGG 1 cut(s) 1062
BstF5I GGATG 8 cut(s) 87, 567, 636, 790, 1262, 1268, 1301, 1383
BstFNI CGCG 1 cut(s) 1064
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 9 cut(s) 129, 147, 186, 404, 534, 543, 726, 1046, 1116
BstMAI GTCTC 5 cut(s) 314, 332, 698, 716, 1459
BstMBI GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
BstMWI GCNNNNNNNGC 8 cut(s) 20, 179, 362, 497, 506, 845, 1277, 1504
BstNSI RCATGY 4 cut(s) 214, 382, 952, 1133
BstSFI CTRYAG 1 cut(s) 1071
BstUI CGCG 1 cut(s) 1064
BstV1I GCAGC 5 cut(s) 250, 851, 985, 1007, 1061
BstX2I RGATCY 2 cut(s) 126, 401
BstYI RGATCY 2 cut(s) 126, 401
Bsu36I CCTNAGG 1 cut(s) 478
BsuRI GGCC 1 cut(s) 1250
BtgI CCRYGG 1 cut(s) 1062
BtsCI GGATG 8 cut(s) 87, 567, 636, 790, 1262, 1268, 1301, 1383
BtsI GCAGTG 1 cut(s) 339
BtsIMutI CAGTG 4 cut(s) 339, 510, 1009, 1484
Cac8I GCNNGC 4 cut(s) 354, 485, 489, 1269
CaiI CAGNNNCTG 1 cut(s) 71
CfoI GCGC 1 cut(s) 358
Cfr13I GGNCC 1 cut(s) 1474
Cfr42I CCGCGG 1 cut(s) 1065
CseI GACGC 1 cut(s) 126
Csp6I GTAC 2 cut(s) 157, 874
CviAII CATG 9 cut(s) 211, 313, 359, 379, 853, 949, 973, 1130, 1396
CviQI GTAC 2 cut(s) 157, 874
DdeI CTNAG 5 cut(s) 478, 619, 738, 879, 1198
DpnI GATC 9 cut(s) 128, 146, 185, 403, 533, 542, 725, 1045, 1115
DpnII GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
EaeI YGGCCR 1 cut(s) 1248
Eam1104I CTCTTC 1 cut(s) 452
EarI CTCTTC 1 cut(s) 452
EciI GGCGGA 2 cut(s) 139, 835
Ecl136II GAGCTC 2 cut(s) 365, 1186
Eco24I GRGCYC 2 cut(s) 367, 1188
Eco31I GGTCTC 2 cut(s) 314, 698
Eco47I GGWCC 1 cut(s) 1474
Eco53kI GAGCTC 2 cut(s) 365, 1186
Eco57I CTGAAG 2 cut(s) 20, 61
Eco81I CCTNAGG 1 cut(s) 478
EcoICRI GAGCTC 2 cut(s) 365, 1186
EcoT38I GRGCYC 2 cut(s) 367, 1188
Esp3I CGTCTC 1 cut(s) 1459
FaeI CATG 9 cut(s) 214, 316, 362, 382, 856, 952, 976, 1133, 1399
FaqI GGGAC 1 cut(s) 833
FatI CATG 9 cut(s) 210, 312, 358, 378, 852, 948, 972, 1129, 1395
FauNDI CATATG 1 cut(s) 1273
FblI GTMKAC 3 cut(s) 192, 390, 522
Fnu4HI GCNGC 8 cut(s) 174, 264, 267, 624, 840, 996, 999, 1050
FokI GGATG 8 cut(s) 94, 554, 623, 797, 1269, 1275, 1308, 1390
FriOI GRGCYC 2 cut(s) 367, 1188
Fsp4HI GCNGC 8 cut(s) 174, 264, 267, 624, 840, 996, 999, 1050
FspBI CTAG 4 cut(s) 275, 632, 938, 1359
GlaI GCGC 1 cut(s) 357
GluI GCNGC 8 cut(s) 174, 264, 267, 624, 840, 996, 999, 1050
GsuI CTGGAG 2 cut(s) 71, 566
HaeIII GGCC 1 cut(s) 1250
HapII CCGG 4 cut(s) 179, 426, 775, 900
HgaI GACGC 1 cut(s) 126
HhaI GCGC 1 cut(s) 358
Hin1II CATG 9 cut(s) 214, 316, 362, 382, 856, 952, 976, 1133, 1399
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HincII GTYRAC 3 cut(s) 57, 559, 1288
HindII GTYRAC 3 cut(s) 57, 559, 1288
HindIII AAGCTT 1 cut(s) 801
HinfI GANTC 7 cut(s) 53, 387, 866, 883, 932, 987, 1315
HpaI GTTAAC 1 cut(s) 1288
HpaII CCGG 4 cut(s) 179, 426, 775, 900
HphI GGTGA 1 cut(s) 1333
Hpy166II GTNNAC 8 cut(s) 28, 57, 193, 300, 391, 523, 559, 1288
Hpy188I TCNGA 6 cut(s) 10, 67, 741, 882, 1320, 1430
Hpy188III TCNNGA 4 cut(s) 79, 148, 1111, 1464
Hpy8I GTNNAC 8 cut(s) 28, 57, 193, 300, 391, 523, 559, 1288
Hpy99I CGWCG 2 cut(s) 142, 1181
HpyAV CCTTC 2 cut(s) 44, 1450
HpyCH4III ACNGT 3 cut(s) 45, 527, 1092
HpyCH4IV ACGT 3 cut(s) 195, 495, 1284
HpyCH4V TGCA 5 cut(s) 256, 332, 948, 962, 1399
HpyF10VI GCNNNNNNNGC 8 cut(s) 20, 179, 362, 497, 506, 845, 1277, 1504
HpyF3I CTNAG 5 cut(s) 478, 619, 738, 879, 1198
HpySE526I ACGT 3 cut(s) 195, 495, 1284
Hsp92II CATG 9 cut(s) 214, 316, 362, 382, 856, 952, 976, 1133, 1399
HspAI GCGC 1 cut(s) 356
KspAI GTTAAC 1 cut(s) 1288
KspI CCGCGG 1 cut(s) 1065
Kzo9I GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
LmnI GCTCC 3 cut(s) 181, 362, 1355
Lsp1109I GCAGC 5 cut(s) 250, 851, 985, 1007, 1061
LweI GCATC 3 cut(s) 509, 518, 603
MaeI CTAG 4 cut(s) 275, 632, 938, 1359
MaeII ACGT 3 cut(s) 195, 495, 1284
MaeIII GTNAC 6 cut(s) 45, 598, 1016, 1066, 1139, 1420
MalI GATC 9 cut(s) 128, 146, 185, 403, 533, 542, 725, 1045, 1115
MboI GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
MboII GAAGA 4 cut(s) 223, 439, 445, 535
MflI RGATCY 2 cut(s) 126, 401
MhlI GDGCHC 2 cut(s) 367, 1188
MluCI AATT 1 cut(s) 1022
MlyI GAGTC 2 cut(s) 62, 396
MmeI TCCRAC 3 cut(s) 776, 964, 1234
MnlI CCTC 8 cut(s) 474, 479, 659, 743, 905, 1127, 1441, 1477
MseI TTAA 7 cut(s) 95, 644, 669, 753, 909, 1287, 1503
MslI CAYNNNNRTG 3 cut(s) 23, 215, 1394
MspA1I CMGCKG 5 cut(s) 285, 491, 998, 1064, 1163
MspCI CTTAAG 1 cut(s) 1502
MspI CCGG 4 cut(s) 179, 426, 775, 900
MvnI CGCG 1 cut(s) 1064
MwoI GCNNNNNNNGC 8 cut(s) 20, 179, 362, 497, 506, 845, 1277, 1504
NdeI CATATG 1 cut(s) 1273
NdeII GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
NlaIII CATG 9 cut(s) 214, 316, 362, 382, 856, 952, 976, 1133, 1399
NlaIV GGNNCC 1 cut(s) 177
NmeAIII GCCGAG 2 cut(s) 630, 1207
NmuCI GTSAC 2 cut(s) 598, 1420
NspI RCATGY 4 cut(s) 214, 382, 952, 1133
OliI CACNNNNGTG 1 cut(s) 23
PciI ACATGT 1 cut(s) 1129
PcsI WCGNNNNNNNCGW 1 cut(s) 552
PfeI GAWTC 5 cut(s) 866, 883, 932, 987, 1315
PkrI GCNGC 8 cut(s) 175, 265, 268, 625, 841, 997, 1000, 1051
PleI GAGTC 2 cut(s) 61, 395
PpsI GAGTC 2 cut(s) 61, 395
PscI ACATGT 1 cut(s) 1129
Psp124BI GAGCTC 2 cut(s) 367, 1188
PspN4I GGNNCC 1 cut(s) 177
PspPI GGNCC 1 cut(s) 1474
PstNI CAGNNNCTG 1 cut(s) 71
PsuI RGATCY 2 cut(s) 126, 401
PvuII CAGCTG 2 cut(s) 491, 998
RsaI GTAC 2 cut(s) 158, 875
RsaNI GTAC 2 cut(s) 157, 874
RseI CAYNNNNRTG 3 cut(s) 23, 215, 1394
SacI GAGCTC 2 cut(s) 367, 1188
SacII CCGCGG 1 cut(s) 1065
SaqAI TTAA 7 cut(s) 95, 644, 669, 753, 909, 1287, 1503
SatI GCNGC 8 cut(s) 174, 264, 267, 624, 840, 996, 999, 1050
Sau3AI GATC 9 cut(s) 126, 144, 183, 401, 531, 540, 723, 1043, 1113
Sau96I GGNCC 1 cut(s) 1474
SchI GAGTC 2 cut(s) 62, 396
SduI GDGCHC 2 cut(s) 367, 1188
SfaNI GCATC 3 cut(s) 509, 518, 603
SfcI CTRYAG 1 cut(s) 1071
Sfr303I CCGCGG 1 cut(s) 1065
SgrBI CCGCGG 1 cut(s) 1065
SinI GGWCC 1 cut(s) 1474
SmiMI CAYNNNNRTG 3 cut(s) 23, 215, 1394
SmlI CTYRAG 1 cut(s) 1502
SmoI CTYRAG 1 cut(s) 1502
SpeI ACTAGT 1 cut(s) 631
Sse9I AATT 1 cut(s) 1022
SspMI CTAG 4 cut(s) 275, 632, 938, 1359
SstI GAGCTC 2 cut(s) 367, 1188
TaaI ACNGT 3 cut(s) 45, 527, 1092
TaiI ACGT 3 cut(s) 198, 498, 1287
TaqI TCGA 2 cut(s) 147, 1463
TasI AATT 1 cut(s) 1022
TauI GCSGC 3 cut(s) 176, 269, 626
TfiI GAWTC 5 cut(s) 866, 883, 932, 987, 1315
Tru1I TTAA 7 cut(s) 95, 644, 669, 753, 909, 1287, 1503
Tru9I TTAA 7 cut(s) 95, 644, 669, 753, 909, 1287, 1503
TscAI CASTG 4 cut(s) 339, 510, 1009, 1484
TseFI GTSAC 2 cut(s) 598, 1420
TseI GCWGC 5 cut(s) 263, 839, 995, 998, 1049
Tsp45I GTSAC 2 cut(s) 598, 1420
TspDTI ATGAA 4 cut(s) 167, 439, 695, 961
TspGWI ACGGA 3 cut(s) 113, 688, 1166
TspRI CASTG 4 cut(s) 339, 510, 1009, 1484
Vha464I CTTAAG 1 cut(s) 1502
VpaK11BI GGWCC 1 cut(s) 1474
XceI RCATGY 4 cut(s) 214, 382, 952, 1133
XmiI GTMKAC 3 cut(s) 192, 390, 522
XspI CTAG 4 cut(s) 275, 632, 938, 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.