Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002892

Physical Location & Seq

Genomic Coordinates Forward (+)

2072311 .. 2075940

Gene Structure 3630 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28464

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGGTTCTCAAGAAGAGCTCCACCAACCCATCTTAAGCTCCGTACCAGAACCCGAACCCGAATCCGAATCAGTAGCCTCTGCTAGTCATGGCGAGGAGTCATCTCTACTTGAGAAGGTACTATCCGACACCCAGTTGCCGTGTTTCAAGAGGCTCCGATTGGCCACATGGATTGAACTCAAGCTCCTCTTCCGCCTTGCTGCTCCTGCCGTCTTCGTTTACGTCATCAACAACACTATGTCACTTTCTACACGTGTCTTCGCCGGCCACCTGGGTAATCTCGAGCTTGCAGCTGCCTCCCTCGGCAATAGCGGCATCCAACTCTTTGCCTACGGCCTCATGTTAGGTATGGGAAGCGCGGTGGAGACTCTATGTGGGCAAGCCTACGGTGCCCACAAGTACGACATGTTAGGCATATATCTCCAAAGAGCAACCATAGTCCTAACCATCACCGGACTTCCACTTCTTGCAGTCTTCATCCTATGCAAGCCCTTATTGCTTTTAATCGGAGAATCATCAGCCTTAGCCTCTGCAGCCGCAGTTTTCGTCTACGGTCTGATCCCACAAATCTTCGCTTACGCTGTCAATTTTCCAATCCAAAAGTTTCTCCAGGCCCAGAGAATTGTTCTTCCAAGTGCCTACATATCTGCGGCTACGCTTGGGGTGCATTTGTTGCTAAGTTGGGTGGCTGTATACGAGTTAGGTTGGGGGTTGATTGGTGCCTCGTTGGTTTTGAGCTTGTCCTGGTGGATCATTGTAATTGCTCAGTTCGTCTACATTTTGACAAGTAGCAAATGTAAGCAGACATGGAGTGGGTTTAGTTTGCAGGCGTTTTCGGGGTTGTGGGAGTTCGTGAAGTTATCGGCTGCATCGGCTGTGATGTTGTGCTTGGAGGTGTGGTACTTTCAGGTGCTAGTGTTGATTGCTGGCTTACTAAAGGACCCTGAGCTTGCTTTGAACTCTTTGGCTGTATGCATGGCGATAAATGGAGTACTGTTCATGGTTTCAGTTGGATTTAACGCAGCTATAAGTGTGCGAGTAAGCAATGAGCTAGGTGCTGGGAATCCAAAGTCGGCAGCATTCTCGGTTGTGATAGTAACACTAGTGTCGTTGGCTATTGCTATAGTTGAAGCCGTCATTGTGCTGTCGCTCCGCGATGTAATCAGTTACGCCTTTACCAGTGGCGAAACTGTTGCCGAAGCAGTCTCTAAACTCACTCCGTATTTGGCCGTCACTCTAATCCTTAATGGGATTCAACCTGTTCTCTCTGGGGTGGCTGTTGGGTGTGGATGGCAAGCCTTTGTGGCATATGTGAATGTGGGATGCTACTATGTGGTTGGAATCCCATTAGGCTGTCTTCTGGGATTTAAGTTCGATCTTGGTGCTCAGGGAATATGGTCGGGGATGATAGGAGGAACATTGATGCAGACCATCATCTTATTGTGGGTAACATTTCGTACGGACTGGATTAAAGAGGTGGACACGAGTAAAAAGCGTTTGGAAAAATGGGATGACTCTAATAAACAGCAGCAGCAACCTCTTCTCAAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

517

Amino Acids

55.71

Weight (kDa)

6.02

Isoelectric Point (pI)

25.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	69 - 229	8.2e-34	MatE
MatE	PF01554	291 - 451	2.3e-29	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11670 AT1G61890 AT1G61890 AT1G61890
fragaria_vesca	FvH4_3g02260 FvH4_3g02260
malus_domestica	MD05G1344300.v1.1 MD10G1320300.v1.1
prunus_persica	Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022100_v2.0.a1 Prupe.4G022100_v2.0.a1
pyrus_communis	pycom05g31370 pycom10g27100
rosa_chinensis	RchiOBHm_Chr5g0003331 RchiOBHm_Chr5g0003381
rosa_laevigata	RLG00000031125 RLG00000031127 RLG00000031131 RLG00000031134
rosa_multiflora	Rmu_sc0006842.1_g000003 Rmu_sc0006842.1_g000010 Rmu_sc0010917.1_g000002 Rmu_sc0010917.1_g000004
rosa_roxburghii	Rroxscaffold_1G00072640
rosa_rugosa	Rorug04G0402900
rosa_samantha	Rh5AG028900 Rh5AG029500 Rh5BG029000 Rh5DG029500
rosa_wichuraiana	Rw0G014030 Rw0G015590 Rw5G002690 Rw5G002740 Rw5G002760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	389, 719
AccI	GTMKAC	3 cut(s)	549, 693, 774
AccII	CGCG	2 cut(s)	359, 1155
AciI	CCGC	6 cut(s)	193, 312, 359, 537, 650, 1153
AclWI	GGATC	2 cut(s)	553, 758
AcoI	YGGCCR	3 cut(s)	162, 265, 1227
AcvI	CACGTG	1 cut(s)	254
AfaI	GTAC	6 cut(s)	45, 120, 401, 902, 993, 1459
AflII	CTTAAG	1 cut(s)	34
AflIII	ACRYGT	3 cut(s)	251, 253, 405
AgsI	TTSAA	5 cut(s)	148, 176, 958, 1130, 1256
AhlI	ACTAGT	1 cut(s)	1102
AjnI	CCWGG	3 cut(s)	270, 609, 743
AloI	GAACNNNNNNTCC	2 cut(s)	168, 200
AluBI	AGCT	9 cut(s)	19, 39, 184, 286, 293, 738, 949, 1025, 1051
AluI	AGCT	9 cut(s)	19, 39, 184, 286, 293, 738, 949, 1025, 1051
Alw21I	GWGCWC	2 cut(s)	21, 1387
Alw26I	GTCTC	2 cut(s)	359, 1210
AlwI	GGATC	2 cut(s)	553, 758
Ama87I	CYCGRG	1 cut(s)	281
AoxI	GGCC	5 cut(s)	162, 265, 334, 612, 1227
ApeKI	GCWGC	9 cut(s)	200, 290, 293, 533, 866, 1022, 1076, 1528, 1531
AspLEI	GCGC	1 cut(s)	359
AspS9I	GGNCC	2 cut(s)	613, 940
AsuHPI	GGTGA	1 cut(s)	442
AvaI	CYCGRG	1 cut(s)	281
AvaII	GGWCC	1 cut(s)	940
BaeGI	GKGCMC	1 cut(s)	394
BalI	TGGCCA	1 cut(s)	164
BanI	GGYRCC	2 cut(s)	389, 719
BanII	GRGCYC	1 cut(s)	21
BauI	CACGAG	1 cut(s)	1483
BbrPI	CACGTG	1 cut(s)	254
BbsI	GAAGAC	4 cut(s)	205, 250, 466, 1349
Bbv12I	GWGCWC	2 cut(s)	21, 1387
BbvI	GCAGC	9 cut(s)	187, 280, 302, 545, 853, 1034, 1088, 1540, 1543
BccI	CCATC	4 cut(s)	38, 455, 1284, 1439
BceAI	ACGGC	5 cut(s)	124, 194, 349, 1118, 1214
BcgI	CGANNNNNNTGC	6 cut(s)	1065, 1099, 1175, 1209, 1364, 1398
BciT130I	CCWGG	3 cut(s)	272, 611, 745
BcoDI	GTCTC	2 cut(s)	359, 1210
BcuI	ACTAGT	1 cut(s)	1102
BfaI	CTAG	4 cut(s)	84, 914, 1052, 1103
BfmI	CTRYAG	2 cut(s)	531, 1122
BfrI	CTTAAG	1 cut(s)	34
BglI	GCCNNNNNGGC	1 cut(s)	1304
BmcAI	AGTACT	1 cut(s)	993
Bme1390I	CCNGG	3 cut(s)	272, 611, 745
Bme18I	GGWCC	1 cut(s)	940
BmeT110I	CYCGRG	1 cut(s)	281
BmgT120I	GGNCC	2 cut(s)	613, 940
BmiI	GGNNCC	4 cut(s)	155, 391, 721, 942
BmrFI	CCNGG	3 cut(s)	272, 611, 745
BmrI	ACTGGG	1 cut(s)	127
BmsI	GCATC	4 cut(s)	324, 878, 1313, 1413
BmuI	ACTGGG	1 cut(s)	127
BpiI	GAAGAC	4 cut(s)	205, 250, 466, 1349
BpmI	CTGGAG	1 cut(s)	593
Bpu10I	CCTNAGC	3 cut(s)	523, 945, 1386
BpuEI	CTTGAG	2 cut(s)	131, 164
BsaAI	YACGTR	1 cut(s)	254
BsaJI	CCNNGG	2 cut(s)	271, 301
BsaWI	WCCGGW	1 cut(s)	452
BsaXI	ACNNNNNCTCC	4 cut(s)	168, 198, 884, 914
Bse118I	RCCGGY	1 cut(s)	263
Bse1I	ACTGG	3 cut(s)	133, 1179, 1469
Bse3DI	GCAATG	1 cut(s)	1051
BseBI	CCWGG	3 cut(s)	272, 611, 745
BseDI	CCNNGG	2 cut(s)	271, 301
BseGI	GGATG	6 cut(s)	315, 477, 1295, 1328, 1410, 1516
BseMI	GCAATG	1 cut(s)	1051
BseMII	CTCAG	3 cut(s)	779, 936, 1400
BseNI	ACTGG	3 cut(s)	133, 1179, 1469
BseRI	GAGGAG	2 cut(s)	110, 176
BseSI	GKGCMC	1 cut(s)	394
BseXI	GCAGC	9 cut(s)	187, 280, 302, 545, 853, 1034, 1088, 1540, 1543
BseYI	CCCAGC	1 cut(s)	1058
Bsh1236I	CGCG	2 cut(s)	359, 1155
BshFI	GGCC	5 cut(s)	164, 267, 336, 614, 1229
BshNI	GGYRCC	2 cut(s)	389, 719
BsiHKAI	GWGCWC	2 cut(s)	21, 1387
BsiHKCI	CYCGRG	1 cut(s)	281
BsiSI	CCGG	2 cut(s)	264, 453
BsiWI	CGTACG	1 cut(s)	1457
BsmAI	GTCTC	2 cut(s)	359, 1210
BsmI	GAATGC	1 cut(s)	1079
BsnI	GGCC	5 cut(s)	164, 267, 336, 614, 1229
BsoBI	CYCGRG	1 cut(s)	281
Bsp1286I	GDGCHC	3 cut(s)	21, 394, 1387
Bsp143I	GATC	3 cut(s)	558, 750, 1375
BspACI	CCGC	6 cut(s)	193, 312, 359, 537, 650, 1153
BspANI	GGCC	5 cut(s)	164, 267, 336, 614, 1229
BspCNI	CTCAG	3 cut(s)	778, 937, 1399
BspFNI	CGCG	2 cut(s)	359, 1155
BspLI	GGNNCC	4 cut(s)	155, 391, 721, 942
BspMAI	CTGCAG	1 cut(s)	535
BspPI	GGATC	2 cut(s)	553, 758
BspQI	GCTCTTC	1 cut(s)	9
BspT107I	GGYRCC	2 cut(s)	389, 719
BspTI	CTTAAG	1 cut(s)	34
BsrDI	GCAATG	1 cut(s)	1051
BsrFI	RCCGGY	1 cut(s)	263
BsrI	ACTGG	3 cut(s)	133, 1179, 1469
BssAI	RCCGGY	1 cut(s)	263
BssECI	CCNNGG	2 cut(s)	271, 301
BssMI	GATC	3 cut(s)	558, 750, 1375
BssNAI	GTATAC	1 cut(s)	694
BssSI	CACGAG	1 cut(s)	1483
Bst1107I	GTATAC	1 cut(s)	694
Bst2BI	CACGAG	1 cut(s)	1483
Bst2UI	CCWGG	3 cut(s)	272, 611, 745
Bst4CI	ACNGT	4 cut(s)	389, 554, 996, 1192
Bst6I	CTCTTC	3 cut(s)	9, 194, 1545
BstAFI	CTTAAG	1 cut(s)	34
BstAPI	GCANNNNNTGC	1 cut(s)	673
BstBAI	YACGTR	1 cut(s)	254
BstC8I	GCNNGC	8 cut(s)	265, 288, 381, 488, 828, 928, 951, 1296
BstDEI	CTNAG	5 cut(s)	523, 677, 765, 945, 1386
BstF5I	GGATG	6 cut(s)	315, 477, 1295, 1328, 1410, 1516
BstFNI	CGCG	2 cut(s)	359, 1155
BstHHI	GCGC	1 cut(s)	359
BstKTI	GATC	3 cut(s)	561, 753, 1378
BstMAI	GTCTC	2 cut(s)	359, 1210
BstMBI	GATC	3 cut(s)	558, 750, 1375
BstMWI	GCNNNNNNNGC	9 cut(s)	206, 312, 389, 496, 533, 664, 673, 872, 1304
BstNI	CCWGG	3 cut(s)	272, 611, 745
BstNSI	RCATGY	1 cut(s)	409
BstSCI	CCNGG	3 cut(s)	270, 609, 743
BstSFI	CTRYAG	2 cut(s)	531, 1122
BstSLI	GKGCMC	1 cut(s)	394
BstUI	CGCG	2 cut(s)	359, 1155
BstV1I	GCAGC	9 cut(s)	187, 280, 302, 545, 853, 1034, 1088, 1540, 1543
BstV2I	GAAGAC	4 cut(s)	205, 250, 466, 1349
BstZ17I	GTATAC	1 cut(s)	694
BsuRI	GGCC	5 cut(s)	164, 267, 336, 614, 1229
BtgZI	GCGATG	1 cut(s)	1170
BtsCI	GGATG	6 cut(s)	315, 477, 1295, 1328, 1410, 1516
BtsIMutI	CAGTG	1 cut(s)	1186
Cac8I	GCNNGC	8 cut(s)	265, 288, 381, 488, 828, 928, 951, 1296
CfoI	GCGC	1 cut(s)	359
Cfr10I	RCCGGY	1 cut(s)	263
Cfr13I	GGNCC	2 cut(s)	613, 940
Csp6I	GTAC	6 cut(s)	44, 119, 400, 901, 992, 1458
CspCI	CAANNNNNGTGG	2 cut(s)	154, 189
CviAII	CATG	7 cut(s)	89, 168, 340, 406, 807, 976, 1000
CviQI	GTAC	6 cut(s)	44, 119, 400, 901, 992, 1458
DdeI	CTNAG	5 cut(s)	523, 677, 765, 945, 1386
DpnI	GATC	3 cut(s)	560, 752, 1377
DpnII	GATC	3 cut(s)	558, 750, 1375
EaeI	YGGCCR	3 cut(s)	162, 265, 1227
Eam1104I	CTCTTC	3 cut(s)	9, 194, 1545
EarI	CTCTTC	3 cut(s)	9, 194, 1545
EciI	GGCGGA	1 cut(s)	182
Ecl136II	GAGCTC	1 cut(s)	19
Eco24I	GRGCYC	1 cut(s)	21
Eco47I	GGWCC	1 cut(s)	940
Eco53kI	GAGCTC	1 cut(s)	19
Eco72I	CACGTG	1 cut(s)	254
Eco88I	CYCGRG	1 cut(s)	281
EcoICRI	GAGCTC	1 cut(s)	19
EcoO109I	RGGNCCY	1 cut(s)	940
EcoRII	CCWGG	3 cut(s)	270, 609, 743
EcoT22I	ATGCAT	1 cut(s)	977
EcoT38I	GRGCYC	1 cut(s)	21
FaeI	CATG	7 cut(s)	92, 171, 343, 409, 810, 979, 1003
FalI	AAGNNNNNCTT	2 cut(s)	173, 205
FatI	CATG	7 cut(s)	88, 167, 339, 405, 806, 975, 999
FauNDI	CATATG	1 cut(s)	1309
FblI	GTMKAC	3 cut(s)	549, 693, 774
FokI	GGATG	6 cut(s)	302, 464, 1302, 1335, 1417, 1523
FriOI	GRGCYC	1 cut(s)	21
FspBI	CTAG	4 cut(s)	84, 914, 1052, 1103
GlaI	GCGC	1 cut(s)	358
GsaI	CCCAGC	1 cut(s)	1062
GsuI	CTGGAG	1 cut(s)	593
HaeIII	GGCC	5 cut(s)	164, 267, 336, 614, 1229
HapII	CCGG	2 cut(s)	264, 453
HhaI	GCGC	1 cut(s)	359
Hin1II	CATG	7 cut(s)	92, 171, 343, 409, 810, 979, 1003
Hin6I	GCGC	1 cut(s)	357
HinP1I	GCGC	1 cut(s)	357
HinfI	GANTC	9 cut(s)	62, 68, 98, 367, 512, 1063, 1252, 1341, 1514
HpaII	CCGG	2 cut(s)	264, 453
HphI	GGTGA	1 cut(s)	442
Hpy166II	GTNNAC	5 cut(s)	220, 550, 694, 775, 1480
Hpy188I	TCNGA	5 cut(s)	67, 127, 158, 509, 558
Hpy188III	TCNNGA	4 cut(s)	11, 148, 281, 853
Hpy8I	GTNNAC	5 cut(s)	220, 550, 694, 775, 1480
HpyAV	CCTTC	1 cut(s)	109
HpyCH4III	ACNGT	4 cut(s)	389, 554, 996, 1192
HpyCH4IV	ACGT	2 cut(s)	222, 253
HpyCH4V	TGCA	9 cut(s)	290, 470, 486, 533, 667, 826, 869, 975, 1426
HpyF10VI	GCNNNNNNNGC	9 cut(s)	206, 312, 389, 496, 533, 664, 673, 872, 1304
HpyF3I	CTNAG	5 cut(s)	523, 677, 765, 945, 1386
HpySE526I	ACGT	2 cut(s)	222, 253
Hsp92II	CATG	7 cut(s)	92, 171, 343, 409, 810, 979, 1003
HspAI	GCGC	1 cut(s)	357
KroI	GCCGGC	1 cut(s)	263
KroNI	GCCGGC	1 cut(s)	265
Kzo9I	GATC	3 cut(s)	558, 750, 1375
LguI	GCTCTTC	1 cut(s)	9
LmnI	GCTCC	6 cut(s)	24, 44, 159, 189, 208, 1155
Lsp1109I	GCAGC	9 cut(s)	187, 280, 302, 545, 853, 1034, 1088, 1540, 1543
LweI	GCATC	4 cut(s)	324, 878, 1313, 1413
MaeI	CTAG	4 cut(s)	84, 914, 1052, 1103
MaeII	ACGT	2 cut(s)	222, 253
MaeIII	GTNAC	5 cut(s)	240, 1096, 1166, 1231, 1447
MalI	GATC	3 cut(s)	560, 752, 1377
MboI	GATC	3 cut(s)	558, 750, 1375
MboII	GAAGA	9 cut(s)	26, 181, 205, 250, 466, 562, 620, 1349, 1532
MhlI	GDGCHC	3 cut(s)	21, 394, 1387
MlsI	TGGCCA	1 cut(s)	164
MluCI	AATT	3 cut(s)	586, 621, 759
MluNI	TGGCCA	1 cut(s)	164
MlyI	GAGTC	3 cut(s)	107, 361, 1508
MmeI	TCCRAC	4 cut(s)	150, 343, 991, 1318
Mox20I	TGGCCA	1 cut(s)	164
Mph1103I	ATGCAT	1 cut(s)	977
MroNI	GCCGGC	1 cut(s)	263
MscI	TGGCCA	1 cut(s)	164
MseI	TTAA	6 cut(s)	35, 503, 1017, 1245, 1368, 1470
Msp20I	TGGCCA	1 cut(s)	164
MspA1I	CMGCKG	1 cut(s)	293
MspCI	CTTAAG	1 cut(s)	34
MspI	CCGG	2 cut(s)	264, 453
MspR9I	CCNGG	3 cut(s)	272, 611, 745
Mva1269I	GAATGC	1 cut(s)	1079
MvaI	CCWGG	3 cut(s)	272, 611, 745
MvnI	CGCG	2 cut(s)	359, 1155
MwoI	GCNNNNNNNGC	9 cut(s)	206, 312, 389, 496, 533, 664, 673, 872, 1304
NaeI	GCCGGC	1 cut(s)	265
NdeI	CATATG	1 cut(s)	1309
NdeII	GATC	3 cut(s)	558, 750, 1375
NgoMIV	GCCGGC	1 cut(s)	263
NlaIII	CATG	7 cut(s)	92, 171, 343, 409, 810, 979, 1003
NlaIV	GGNNCC	4 cut(s)	155, 391, 721, 942
NmeAIII	GCCGAG	1 cut(s)	282
NmuCI	GTSAC	2 cut(s)	240, 1231
NsiI	ATGCAT	1 cut(s)	977
NspI	RCATGY	1 cut(s)	409
PaeR7I	CTCGAG	1 cut(s)	281
PciI	ACATGT	1 cut(s)	405
PciSI	GCTCTTC	1 cut(s)	9
PctI	GAATGC	1 cut(s)	1079
PdiI	GCCGGC	1 cut(s)	265
PfeI	GAWTC	6 cut(s)	62, 68, 512, 1063, 1252, 1341
Pfl23II	CGTACG	1 cut(s)	1457
PleI	GAGTC	3 cut(s)	106, 361, 1508
PmaCI	CACGTG	1 cut(s)	254
PmlI	CACGTG	1 cut(s)	254
PpsI	GAGTC	3 cut(s)	106, 361, 1508
Ppu21I	YACGTR	1 cut(s)	254
PpuMI	RGGWCCY	1 cut(s)	940
PscI	ACATGT	1 cut(s)	405
Psp124BI	GAGCTC	1 cut(s)	21
Psp5II	RGGWCCY	1 cut(s)	940
Psp6I	CCWGG	3 cut(s)	270, 609, 743
PspCI	CACGTG	1 cut(s)	254
PspFI	CCCAGC	1 cut(s)	1058
PspGI	CCWGG	3 cut(s)	270, 609, 743
PspLI	CGTACG	1 cut(s)	1457
PspN4I	GGNNCC	4 cut(s)	155, 391, 721, 942
PspPI	GGNCC	2 cut(s)	613, 940
PspPPI	RGGWCCY	1 cut(s)	940
PstI	CTGCAG	1 cut(s)	535
PvuII	CAGCTG	1 cut(s)	293
RsaI	GTAC	6 cut(s)	45, 120, 401, 902, 993, 1459
RsaNI	GTAC	6 cut(s)	44, 119, 400, 901, 992, 1458
SacI	GAGCTC	1 cut(s)	21
SapI	GCTCTTC	1 cut(s)	9
SaqAI	TTAA	6 cut(s)	35, 503, 1017, 1245, 1368, 1470
Sau3AI	GATC	3 cut(s)	558, 750, 1375
Sau96I	GGNCC	2 cut(s)	613, 940
ScaI	AGTACT	1 cut(s)	993
SchI	GAGTC	3 cut(s)	107, 361, 1508
ScrFI	CCNGG	3 cut(s)	272, 611, 745
SduI	GDGCHC	3 cut(s)	21, 394, 1387
SfaNI	GCATC	4 cut(s)	324, 878, 1313, 1413
SfcI	CTRYAG	2 cut(s)	531, 1122
Sfr274I	CTCGAG	1 cut(s)	281
SinI	GGWCC	1 cut(s)	940
SlaI	CTCGAG	1 cut(s)	281
SmlI	CTYRAG	5 cut(s)	9, 34, 110, 179, 281
SmoI	CTYRAG	5 cut(s)	9, 34, 110, 179, 281
SpeI	ACTAGT	1 cut(s)	1102
Sse9I	AATT	3 cut(s)	586, 621, 759
SsiI	CCGC	6 cut(s)	193, 312, 359, 537, 650, 1153
SspMI	CTAG	4 cut(s)	84, 914, 1052, 1103
SstI	GAGCTC	1 cut(s)	21
StyD4I	CCNGG	3 cut(s)	270, 609, 743
TaaI	ACNGT	4 cut(s)	389, 554, 996, 1192
TaiI	ACGT	2 cut(s)	225, 256
TaqI	TCGA	2 cut(s)	282, 1374
TasI	AATT	3 cut(s)	586, 621, 759
TatI	WGTACW	1 cut(s)	991
TauI	GCSGC	3 cut(s)	315, 539, 653
TfiI	GAWTC	6 cut(s)	62, 68, 512, 1063, 1252, 1341
Tru1I	TTAA	6 cut(s)	35, 503, 1017, 1245, 1368, 1470
Tru9I	TTAA	6 cut(s)	35, 503, 1017, 1245, 1368, 1470
TscAI	CASTG	1 cut(s)	1186
TseFI	GTSAC	2 cut(s)	240, 1231
TseI	GCWGC	9 cut(s)	200, 290, 293, 533, 866, 1022, 1076, 1528, 1531
Tsp45I	GTSAC	2 cut(s)	240, 1231
TspDTI	ATGAA	2 cut(s)	466, 988
TspGWI	ACGGA	3 cut(s)	31, 1209, 1475
TspRI	CASTG	1 cut(s)	1186
Vha464I	CTTAAG	1 cut(s)	34
VpaK11BI	GGWCC	1 cut(s)	940
XceI	RCATGY	1 cut(s)	409
XhoI	CTCGAG	1 cut(s)	281
XmiI	GTMKAC	3 cut(s)	549, 693, 774
XspI	CTAG	4 cut(s)	84, 914, 1052, 1103
ZrmI	AGTACT	1 cut(s)	993
Zsp2I	ATGCAT	1 cut(s)	977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.