Protein TRANSPARENT TESTA 12-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11670 AT1G61890 AT1G61890 AT1G61890 |
| fragaria_vesca | FvH4_3g02260 FvH4_3g02260 |
| malus_domestica | MD05G1344300.v1.1 MD10G1320300.v1.1 |
| prunus_persica | Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022100_v2.0.a1 Prupe.4G022100_v2.0.a1 |
| pyrus_communis | pycom05g31370 pycom10g27100 |
| rosa_chinensis | RchiOBHm_Chr5g0003331 RchiOBHm_Chr5g0003381 |
| rosa_laevigata | RLG00000031125 RLG00000031127 RLG00000031131 RLG00000031134 |
| rosa_multiflora | Rmu_sc0006842.1_g000003 Rmu_sc0006842.1_g000010 Rmu_sc0010917.1_g000002 Rmu_sc0010917.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00072640 |
| rosa_rugosa | Rorug04G0402900 |
| rosa_samantha | Rh5AG028900 Rh5AG029500 Rh5BG029000 Rh5DG029500 |
| rosa_wichuraiana | Rw0G014030 Rw0G015590 Rw5G002690 Rw5G002740 Rw5G002760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 106 |
| AccB1I | GGYRCC | 1 cut(s) | 374 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 310 |
| AccI | GTMKAC | 1 cut(s) | 534 |
| AccII | CGCG | 2 cut(s) | 1140, 1482 |
| AclWI | GGATC | 1 cut(s) | 164 |
| AcoI | YGGCCR | 6 cut(s) | 147, 250, 273, 951, 1179, 1212 |
| AcsI | RAATTY | 2 cut(s) | 943, 1326 |
| AfaI | GTAC | 3 cut(s) | 680, 887, 1444 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 310, 451, 822, 1255 |
| AflIII | ACRYGT | 1 cut(s) | 390 |
| AgsI | TTSAA | 6 cut(s) | 133, 410, 584, 841, 1003, 1241 |
| AleI | CACNNNNGTG | 1 cut(s) | 893 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 153, 185 |
| Alw21I | GWGCWC | 1 cut(s) | 1131 |
| Alw26I | GTCTC | 8 cut(s) | 9, 69, 92, 202, 344, 545, 714, 1195 |
| AlwI | GGATC | 1 cut(s) | 164 |
| Ama87I | CYCGRG | 1 cut(s) | 95 |
| ApeKI | GCWGC | 8 cut(s) | 53, 185, 635, 851, 1007, 1010, 1061, 1507 |
| ApoI | RAATTY | 2 cut(s) | 943, 1326 |
| AspS9I | GGNCC | 1 cut(s) | 613 |
| AsuC2I | CCSGG | 1 cut(s) | 1255 |
| AsuHPI | GGTGA | 4 cut(s) | 874, 1036, 1153, 1181 |
| AvaI | CYCGRG | 1 cut(s) | 95 |
| BaeGI | GKGCMC | 1 cut(s) | 379 |
| BalI | TGGCCA | 2 cut(s) | 149, 1181 |
| BanI | GGYRCC | 1 cut(s) | 374 |
| BanII | GRGCYC | 1 cut(s) | 751 |
| Bbv12I | GWGCWC | 1 cut(s) | 1131 |
| BbvCI | CCTCAGC | 2 cut(s) | 514, 1371 |
| BbvI | GCAGC | 8 cut(s) | 65, 172, 647, 838, 997, 1019, 1073, 1519 |
| BccI | CCATC | 1 cut(s) | 35 |
| BceAI | ACGGC | 5 cut(s) | 179, 491, 509, 938, 1199 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1050, 1084, 1349, 1383 |
| BcnI | CCSGG | 1 cut(s) | 1255 |
| BcoDI | GTCTC | 8 cut(s) | 9, 69, 92, 202, 344, 545, 714, 1195 |
| BfaI | CTAG | 5 cut(s) | 329, 701, 899, 1037, 1223 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 258 |
| BlpI | GCTNAGC | 1 cut(s) | 662 |
| Bme1390I | CCNGG | 1 cut(s) | 1255 |
| BmeT110I | CYCGRG | 1 cut(s) | 95 |
| BmgT120I | GGNCC | 1 cut(s) | 613 |
| BmiI | GGNNCC | 4 cut(s) | 48, 376, 615, 748 |
| BmrFI | CCNGG | 1 cut(s) | 1255 |
| BmrI | ACTGGG | 1 cut(s) | 1459 |
| BmsI | GCATC | 3 cut(s) | 309, 863, 1398 |
| BmuI | ACTGGG | 1 cut(s) | 1459 |
| BpmI | CTGGAG | 1 cut(s) | 49 |
| Bpu10I | CCTNAGC | 3 cut(s) | 514, 930, 1371 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 662 |
| BpuEI | CTTGAG | 2 cut(s) | 149, 287 |
| BpuMI | CCSGG | 1 cut(s) | 1255 |
| BsaAI | YACGTR | 1 cut(s) | 1318 |
| BsaI | GGTCTC | 2 cut(s) | 69, 545 |
| BsaJI | CCNNGG | 6 cut(s) | 256, 507, 1095, 1182, 1254, 1363 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 66, 96, 153, 183, 869, 899 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 310, 451, 822, 1255 |
| Bse118I | RCCGGY | 2 cut(s) | 49, 248 |
| Bse1I | ACTGG | 3 cut(s) | 442, 1244, 1454 |
| Bse3DI | GCAATG | 2 cut(s) | 76, 1036 |
| BseDI | CCNNGG | 6 cut(s) | 256, 507, 1095, 1182, 1254, 1363 |
| BseGI | GGATG | 5 cut(s) | 300, 543, 1313, 1395, 1501 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 310, 451, 822, 1255 |
| BseMI | GCAATG | 2 cut(s) | 76, 1036 |
| BseMII | CTCAG | 5 cut(s) | 528, 653, 905, 921, 1362 |
| BseNI | ACTGG | 3 cut(s) | 442, 1244, 1454 |
| BseRI | GAGGAG | 2 cut(s) | 161, 455 |
| BseSI | GKGCMC | 1 cut(s) | 379 |
| BseXI | GCAGC | 8 cut(s) | 65, 172, 647, 838, 997, 1019, 1073, 1519 |
| BseYI | CCCAGC | 3 cut(s) | 666, 685, 911 |
| BsgI | GTGCAG | 1 cut(s) | 363 |
| Bsh1236I | CGCG | 2 cut(s) | 1140, 1482 |
| BshNI | GGYRCC | 1 cut(s) | 374 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1131 |
| BsiHKCI | CYCGRG | 1 cut(s) | 95 |
| BsiSI | CCGG | 3 cut(s) | 50, 249, 1254 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 310, 451, 822, 1255 |
| BsmAI | GTCTC | 8 cut(s) | 9, 69, 92, 202, 344, 545, 714, 1195 |
| BsmBI | CGTCTC | 3 cut(s) | 92, 202, 714 |
| BsmI | GAATGC | 1 cut(s) | 1064 |
| Bso31I | GGTCTC | 2 cut(s) | 69, 545 |
| BsoBI | CYCGRG | 1 cut(s) | 95 |
| Bsp1286I | GDGCHC | 3 cut(s) | 379, 751, 1131 |
| Bsp1407I | TGTACA | 1 cut(s) | 678 |
| Bsp143I | GATC | 1 cut(s) | 156 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 662 |
| BspCNI | CTCAG | 5 cut(s) | 527, 654, 904, 922, 1363 |
| BspFNI | CGCG | 2 cut(s) | 1140, 1482 |
| BspLI | GGNNCC | 4 cut(s) | 48, 376, 615, 748 |
| BspPI | GGATC | 1 cut(s) | 164 |
| BspT107I | GGYRCC | 1 cut(s) | 374 |
| BspTNI | GGTCTC | 2 cut(s) | 69, 545 |
| BsrDI | GCAATG | 2 cut(s) | 76, 1036 |
| BsrFI | RCCGGY | 2 cut(s) | 49, 248 |
| BsrGI | TGTACA | 1 cut(s) | 678 |
| BsrI | ACTGG | 3 cut(s) | 442, 1244, 1454 |
| BssAI | RCCGGY | 2 cut(s) | 49, 248 |
| BssECI | CCNNGG | 6 cut(s) | 256, 507, 1095, 1182, 1254, 1363 |
| BssMI | GATC | 1 cut(s) | 156 |
| BssT1I | CCWWGG | 3 cut(s) | 1095, 1182, 1363 |
| Bst4CI | ACNGT | 6 cut(s) | 80, 103, 374, 539, 1177, 1428 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 658 |
| BstAUI | TGTACA | 1 cut(s) | 678 |
| BstBAI | YACGTR | 1 cut(s) | 1318 |
| BstC8I | GCNNGC | 7 cut(s) | 250, 273, 366, 772, 813, 936, 1281 |
| BstDEI | CTNAG | 6 cut(s) | 31, 514, 662, 891, 930, 1371 |
| BstDSI | CCRYGG | 1 cut(s) | 507 |
| BstF5I | GGATG | 5 cut(s) | 300, 543, 1313, 1395, 1501 |
| BstFNI | CGCG | 2 cut(s) | 1140, 1482 |
| BstKTI | GATC | 1 cut(s) | 159 |
| BstMAI | GTCTC | 8 cut(s) | 9, 69, 92, 202, 344, 545, 714, 1195 |
| BstMBI | GATC | 1 cut(s) | 156 |
| BstNSI | RCATGY | 2 cut(s) | 394, 964 |
| BstSCI | CCNGG | 1 cut(s) | 1253 |
| BstSLI | GKGCMC | 1 cut(s) | 379 |
| BstSNI | TACGTA | 1 cut(s) | 1318 |
| BstUI | CGCG | 2 cut(s) | 1140, 1482 |
| BstV1I | GCAGC | 8 cut(s) | 65, 172, 647, 838, 997, 1019, 1073, 1519 |
| BtgI | CCRYGG | 1 cut(s) | 507 |
| BtsCI | GGATG | 5 cut(s) | 300, 543, 1313, 1395, 1501 |
| BtsI | GCAGTG | 1 cut(s) | 351 |
| BtsIMutI | CAGTG | 4 cut(s) | 351, 435, 785, 811 |
| Cac8I | GCNNGC | 7 cut(s) | 250, 273, 366, 772, 813, 936, 1281 |
| Cfr10I | RCCGGY | 2 cut(s) | 49, 248 |
| Cfr13I | GGNCC | 1 cut(s) | 613 |
| CseI | GACGC | 1 cut(s) | 696 |
| Csp6I | GTAC | 3 cut(s) | 679, 886, 1443 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 489, 524 |
| CviAII | CATG | 9 cut(s) | 145, 153, 223, 325, 334, 391, 961, 985, 1332 |
| CviQI | GTAC | 3 cut(s) | 679, 886, 1443 |
| DdeI | CTNAG | 6 cut(s) | 31, 514, 662, 891, 930, 1371 |
| DpnI | GATC | 1 cut(s) | 158 |
| DpnII | GATC | 1 cut(s) | 156 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 106 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 106 |
| EaeI | YGGCCR | 6 cut(s) | 147, 250, 273, 951, 1179, 1212 |
| Eco105I | TACGTA | 1 cut(s) | 1318 |
| Eco130I | CCWWGG | 3 cut(s) | 1095, 1182, 1363 |
| Eco24I | GRGCYC | 1 cut(s) | 751 |
| Eco31I | GGTCTC | 2 cut(s) | 69, 545 |
| Eco88I | CYCGRG | 1 cut(s) | 95 |
| EcoRI | GAATTC | 1 cut(s) | 1326 |
| EcoT14I | CCWWGG | 3 cut(s) | 1095, 1182, 1363 |
| EcoT22I | ATGCAT | 1 cut(s) | 962 |
| EcoT38I | GRGCYC | 1 cut(s) | 751 |
| ErhI | CCWWGG | 3 cut(s) | 1095, 1182, 1363 |
| Esp3I | CGTCTC | 3 cut(s) | 92, 202, 714 |
| FaeI | CATG | 9 cut(s) | 148, 156, 226, 328, 337, 394, 964, 988, 1335 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 158, 190 |
| FatI | CATG | 9 cut(s) | 144, 152, 222, 324, 333, 390, 960, 984, 1331 |
| FauI | CCCGC | 1 cut(s) | 199 |
| FauNDI | CATATG | 1 cut(s) | 1294 |
| FblI | GTMKAC | 1 cut(s) | 534 |
| FokI | GGATG | 5 cut(s) | 287, 530, 1320, 1402, 1508 |
| FriOI | GRGCYC | 1 cut(s) | 751 |
| FspBI | CTAG | 5 cut(s) | 329, 701, 899, 1037, 1223 |
| GsaI | CCCAGC | 3 cut(s) | 670, 689, 915 |
| GsuI | CTGGAG | 1 cut(s) | 49 |
| HapII | CCGG | 3 cut(s) | 50, 249, 1254 |
| HgaI | GACGC | 1 cut(s) | 696 |
| Hin1II | CATG | 9 cut(s) | 148, 156, 226, 328, 337, 394, 964, 988, 1335 |
| HinfI | GANTC | 4 cut(s) | 138, 352, 1048, 1237 |
| HpaII | CCGG | 3 cut(s) | 50, 249, 1254 |
| HphI | GGTGA | 4 cut(s) | 874, 1036, 1153, 1181 |
| Hpy166II | GTNNAC | 7 cut(s) | 85, 535, 679, 760, 785, 888, 1465 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 112, 1407 |
| Hpy188III | TCNNGA | 3 cut(s) | 97, 266, 929 |
| Hpy8I | GTNNAC | 7 cut(s) | 85, 535, 679, 760, 785, 888, 1465 |
| Hpy99I | CGWCG | 1 cut(s) | 1145 |
| HpyAV | CCTTC | 2 cut(s) | 416, 1168 |
| HpyCH4III | ACNGT | 6 cut(s) | 80, 103, 374, 539, 1177, 1428 |
| HpyCH4IV | ACGT | 2 cut(s) | 1143, 1317 |
| HpyCH4V | TGCA | 9 cut(s) | 344, 652, 811, 854, 938, 960, 1007, 1013, 1411 |
| HpyF3I | CTNAG | 6 cut(s) | 31, 514, 662, 891, 930, 1371 |
| HpySE526I | ACGT | 2 cut(s) | 1143, 1317 |
| Hsp92II | CATG | 9 cut(s) | 148, 156, 226, 328, 337, 394, 964, 988, 1335 |
| KroI | GCCGGC | 1 cut(s) | 248 |
| KroNI | GCCGGC | 1 cut(s) | 250 |
| Kzo9I | GATC | 1 cut(s) | 156 |
| LmnI | GCTCC | 3 cut(s) | 174, 746, 1504 |
| Lsp1109I | GCAGC | 8 cut(s) | 65, 172, 647, 838, 997, 1019, 1073, 1519 |
| LweI | GCATC | 3 cut(s) | 309, 863, 1398 |
| MaeI | CTAG | 5 cut(s) | 329, 701, 899, 1037, 1223 |
| MaeII | ACGT | 2 cut(s) | 1143, 1317 |
| MaeIII | GTNAC | 4 cut(s) | 225, 1081, 1216, 1432 |
| MalI | GATC | 1 cut(s) | 158 |
| MboI | GATC | 1 cut(s) | 156 |
| MboII | GAAGA | 2 cut(s) | 235, 973 |
| MfeI | CAATTG | 1 cut(s) | 119 |
| MhlI | GDGCHC | 3 cut(s) | 379, 751, 1131 |
| MlsI | TGGCCA | 2 cut(s) | 149, 1181 |
| MluCI | AATT | 5 cut(s) | 119, 606, 943, 1326, 1419 |
| MluNI | TGGCCA | 2 cut(s) | 149, 1181 |
| MlyI | GAGTC | 2 cut(s) | 132, 346 |
| MmeI | TCCRAC | 4 cut(s) | 135, 328, 724, 1303 |
| Mox20I | TGGCCA | 2 cut(s) | 149, 1181 |
| Mph1103I | ATGCAT | 1 cut(s) | 962 |
| MroNI | GCCGGC | 1 cut(s) | 248 |
| MscI | TGGCCA | 2 cut(s) | 149, 1181 |
| MseI | TTAA | 4 cut(s) | 213, 395, 968, 1418 |
| MslI | CAYNNNNRTG | 1 cut(s) | 893 |
| Msp20I | TGGCCA | 2 cut(s) | 149, 1181 |
| MspA1I | CMGCKG | 3 cut(s) | 297, 1010, 1167 |
| MspI | CCGG | 3 cut(s) | 50, 249, 1254 |
| MspR9I | CCNGG | 1 cut(s) | 1255 |
| MunI | CAATTG | 1 cut(s) | 119 |
| Mva1269I | GAATGC | 1 cut(s) | 1064 |
| MvnI | CGCG | 2 cut(s) | 1140, 1482 |
| NaeI | GCCGGC | 1 cut(s) | 250 |
| NciI | CCSGG | 1 cut(s) | 1255 |
| NdeI | CATATG | 1 cut(s) | 1294 |
| NdeII | GATC | 1 cut(s) | 156 |
| NgoMIV | GCCGGC | 1 cut(s) | 248 |
| NlaIII | CATG | 9 cut(s) | 148, 156, 226, 328, 337, 394, 964, 988, 1335 |
| NlaIV | GGNNCC | 4 cut(s) | 48, 376, 615, 748 |
| NmeAIII | GCCGAG | 3 cut(s) | 237, 267, 471 |
| NmuCI | GTSAC | 2 cut(s) | 225, 1216 |
| NsiI | ATGCAT | 1 cut(s) | 962 |
| NspI | RCATGY | 2 cut(s) | 394, 964 |
| OliI | CACNNNNGTG | 1 cut(s) | 893 |
| PaeR7I | CTCGAG | 1 cut(s) | 95 |
| PciI | ACATGT | 1 cut(s) | 390 |
| PctI | GAATGC | 1 cut(s) | 1064 |
| PdiI | GCCGGC | 1 cut(s) | 250 |
| PfeI | GAWTC | 2 cut(s) | 1048, 1237 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 310 |
| PleI | GAGTC | 2 cut(s) | 132, 346 |
| PpsI | GAGTC | 2 cut(s) | 132, 346 |
| Ppu21I | YACGTR | 1 cut(s) | 1318 |
| PscI | ACATGT | 1 cut(s) | 390 |
| PspFI | CCCAGC | 3 cut(s) | 666, 685, 911 |
| PspN4I | GGNNCC | 4 cut(s) | 48, 376, 615, 748 |
| PspPI | GGNCC | 1 cut(s) | 613 |
| PvuII | CAGCTG | 1 cut(s) | 1010 |
| RsaI | GTAC | 3 cut(s) | 680, 887, 1444 |
| RsaNI | GTAC | 3 cut(s) | 679, 886, 1443 |
| RseI | CAYNNNNRTG | 1 cut(s) | 893 |
| SaqAI | TTAA | 4 cut(s) | 213, 395, 968, 1418 |
| Sau3AI | GATC | 1 cut(s) | 156 |
| Sau96I | GGNCC | 1 cut(s) | 613 |
| SchI | GAGTC | 2 cut(s) | 132, 346 |
| ScrFI | CCNGG | 1 cut(s) | 1255 |
| SduI | GDGCHC | 3 cut(s) | 379, 751, 1131 |
| SfaNI | GCATC | 3 cut(s) | 309, 863, 1398 |
| Sfr274I | CTCGAG | 1 cut(s) | 95 |
| SlaI | CTCGAG | 1 cut(s) | 95 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 893 |
| SmlI | CTYRAG | 4 cut(s) | 6, 95, 164, 266 |
| SmoI | CTYRAG | 4 cut(s) | 6, 95, 164, 266 |
| SnaBI | TACGTA | 1 cut(s) | 1318 |
| Sse9I | AATT | 5 cut(s) | 119, 606, 943, 1326, 1419 |
| SspI | AATATT | 1 cut(s) | 555 |
| SspMI | CTAG | 5 cut(s) | 329, 701, 899, 1037, 1223 |
| StyD4I | CCNGG | 1 cut(s) | 1253 |
| StyI | CCWWGG | 3 cut(s) | 1095, 1182, 1363 |
| TaaI | ACNGT | 6 cut(s) | 80, 103, 374, 539, 1177, 1428 |
| TaiI | ACGT | 2 cut(s) | 1146, 1320 |
| TaqI | TCGA | 3 cut(s) | 96, 159, 1359 |
| TasI | AATT | 5 cut(s) | 119, 606, 943, 1326, 1419 |
| TatI | WGTACW | 1 cut(s) | 678 |
| TauI | GCSGC | 6 cut(s) | 278, 281, 300, 521, 524, 1338 |
| TfiI | GAWTC | 2 cut(s) | 1048, 1237 |
| Tru1I | TTAA | 4 cut(s) | 213, 395, 968, 1418 |
| Tru9I | TTAA | 4 cut(s) | 213, 395, 968, 1418 |
| TscAI | CASTG | 4 cut(s) | 351, 442, 785, 811 |
| TseFI | GTSAC | 2 cut(s) | 225, 1216 |
| TseI | GCWGC | 8 cut(s) | 53, 185, 635, 851, 1007, 1010, 1061, 1507 |
| Tsp45I | GTSAC | 2 cut(s) | 225, 1216 |
| TspDTI | ATGAA | 1 cut(s) | 973 |
| TspRI | CASTG | 4 cut(s) | 351, 442, 785, 811 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 310 |
| XapI | RAATTY | 2 cut(s) | 943, 1326 |
| XceI | RCATGY | 2 cut(s) | 394, 964 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1480 |
| XhoI | CTCGAG | 1 cut(s) | 95 |
| XmiI | GTMKAC | 1 cut(s) | 534 |
| XspI | CTAG | 5 cut(s) | 329, 701, 899, 1037, 1223 |
| Zsp2I | ATGCAT | 1 cut(s) | 962 |