Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0002892

Physical Location & Seq

Genomic Coordinates Forward (+)

2039827 .. 2053388

Gene Structure 13562 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG029500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGCAGCCTGCCTCATATAGTTCCACTGCAGCGCATATCCATCACAAACACTACACTATGGGTTCTCAAGAAGAGCTCCACCAAGCCATCTTAAGCTCCGAACCAGAACCCGAATCCGAATCAGTAGCCTCCGCTAGTCATGGCGGGGAGTCATCTCCACTTGAGAAGGTACTATCCGACACCCAGTTGCCGTGTTTCAAGAGGCTCCGATTGGCCACATGGATTGAACTCAAGCTCCTCTTCCACCTTGCTGCTCCTGCCGTCTTCGTTTACTTCATCAACAACACTATGTCACTTTCTACACGTGTCTTCGCCGGCCACCTGGGTAATCTCGAGCTTGCAGCTGCCTCGCTCGGCAATAGCGGCATCCAACTCTTTGCCTACGGCCTCATGTTAGGTATGGGAAGCGCTGTGGAGACTCTATGTGGGCAAGCCTACGGTGCCCACAAGTACGACATGTTAGGCATATATCTCCAAAGAGCAACCATAGTCCTAACCATCACCGGACTTCCACTTCTTGCAGTCTTCATCCTAAGCAAGCCCTTATTGCTTTTAATCGGAGAATCATCAGCCTTAGCCTCTGCGGCCGCAGTTTTCGTCTACGGTCTGATCCCACAAATCTTCGCTTACGCTGTCAATTTTCCAATCCAAAAATTTCTCCAGGCCCAGAGAATTGTGCTTCCAAGTGCCTACATATCTGCGGCTACGCTTGGGGTGCATTTATTGCTAAGTTGGGTGGCTGTATACCAGTTAGGTTGGGGGTTGATTGGTGCCTCGTTGGTTTTGAGCTTGTCTTGGTGGATCATTGTAATTGCTCAGTTCGTCTACATTTTGACAAGTAGCAAATGTAAGCAGACATGGATTGGGTTTAGTTTGCAGGCGTTTTCGGGGTTGTGGGAGTTCGTGAAGTTATCGGCTGCATCGGCTGTGATGTTGTGCTTGGAGGTGTGGTACTTTCAGGTGCTAGTGTTGATTGCTGGCTTACTAAAGGACCCTGAGCTTGCTTTGAACTCATTGTCTGTATGCATGGCGATAAATGGAGAATTGATCATGGTTTCAATTGGATTTAACGCAGCTATAAGTGTGCGAGTAAGCAACGAGCTAGGTGCTGGGAATCCAAAGTCGGCAGCATTCTCGGTTGTGATAGTAACACTAGTGTCGTTGGCTATTGCTATAGTTGAAGCCGTCATTGTTCTATCGCTCCGCGATGTAATCAGTTATGTTTTTACCAGTGGCGAAACTGTTGCCGAAGCCGTCTCTAAACTCACTCCGTATTTGGCCTTTACTCTAATCCTTAATGGGATTCAACCTGTCCTCTCGGGGGTGGCTGTTGGGTGTGGGTGGCAAACCTTTGTGGCATATGTGAATGTGGGATGCTATTACGTGGTTGGAATCCCATTAGGCTGTCTTCTGGGATTTAAGTTCGATCTTGGTGCTCAGGGAATATGGTCAGGGATGATAGGAGGAACATTGATGCAGACCATCATCTTATTGTGGGTAACATTTCGTACGGACTGGATTAAAGAGGTGGACACGAGTAAAAAGCGTTTGGAAAAATGGGACGACTCTAATAAACAGCAGCAGCAACCTCTTCTCAAAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MatE

Protein Analysis

534

Amino Acids

57.72

Weight (kDa)

6.55

Isoelectric Point (pI)

28.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MatE	PF01554	86 - 246	3.3e-34	MatE
MatE	PF01554	308 - 468	4.2e-29	MatE

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002892)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11670 AT1G61890 AT1G61890 AT1G61890
fragaria_vesca	FvH4_3g02260 FvH4_3g02260
malus_domestica	MD05G1344300.v1.1 MD10G1320300.v1.1
prunus_persica	Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022000_v2.0.a1 Prupe.4G022100_v2.0.a1 Prupe.4G022100_v2.0.a1
pyrus_communis	pycom05g31370 pycom10g27100
rosa_chinensis	RchiOBHm_Chr5g0003331 RchiOBHm_Chr5g0003381
rosa_laevigata	RLG00000031125 RLG00000031127 RLG00000031131 RLG00000031134
rosa_multiflora	Rmu_sc0006842.1_g000003 Rmu_sc0006842.1_g000010 Rmu_sc0010917.1_g000002 Rmu_sc0010917.1_g000004
rosa_roxburghii	Rroxscaffold_1G00072640
rosa_rugosa	Rorug04G0402900
rosa_samantha	Rh5AG028900 Rh5AG029500 Rh5BG029000 Rh5DG029500
rosa_wichuraiana	Rw0G014030 Rw0G015590 Rw5G002690 Rw5G002740 Rw5G002760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	440, 770
AccI	GTMKAC	3 cut(s)	600, 744, 825
AccII	CGCG	1 cut(s)	1206
AciI	CCGC	7 cut(s)	132, 144, 363, 584, 588, 701, 1204
AclWI	GGATC	2 cut(s)	604, 809
AcoI	YGGCCR	3 cut(s)	213, 316, 585
AcsI	RAATTY	1 cut(s)	653
AcvI	CACGTG	1 cut(s)	305
AfaI	GTAC	4 cut(s)	171, 452, 953, 1510
AfeI	AGCGCT	1 cut(s)	409
AfiI	CCNNNNNNNGG	1 cut(s)	1321
AflII	CTTAAG	1 cut(s)	91
AflIII	ACRYGT	3 cut(s)	302, 304, 456
AgsI	TTSAA	6 cut(s)	199, 227, 1009, 1059, 1181, 1307
AhlI	ACTAGT	1 cut(s)	1153
AjnI	CCWGG	2 cut(s)	321, 660
AloI	GAACNNNNNNTCC	2 cut(s)	219, 251
Alw21I	GWGCWC	2 cut(s)	78, 1438
Alw26I	GTCTC	2 cut(s)	410, 1261
AlwI	GGATC	2 cut(s)	604, 809
Ama87I	CYCGRG	2 cut(s)	332, 1318
Aor51HI	AGCGCT	1 cut(s)	409
AoxI	GGCC	6 cut(s)	213, 316, 385, 585, 663, 1278
ApoI	RAATTY	1 cut(s)	653
AspLEI	GCGC	2 cut(s)	34, 410
AspS9I	GGNCC	2 cut(s)	664, 991
AsuHPI	GGTGA	1 cut(s)	493
AvaI	CYCGRG	2 cut(s)	332, 1318
AvaII	GGWCC	1 cut(s)	991
BaeGI	GKGCMC	1 cut(s)	445
BalI	TGGCCA	1 cut(s)	215
BanI	GGYRCC	2 cut(s)	440, 770
BanII	GRGCYC	1 cut(s)	78
BauI	CACGAG	1 cut(s)	1534
BbrPI	CACGTG	1 cut(s)	305
BbsI	GAAGAC	4 cut(s)	256, 301, 517, 1400
Bbv12I	GWGCWC	2 cut(s)	78, 1438
BccI	CCATC	4 cut(s)	48, 95, 506, 1490
BceAI	ACGGC	5 cut(s)	175, 245, 400, 1169, 1238
BciT130I	CCWGG	2 cut(s)	323, 662
BclI	TGATCA	1 cut(s)	1047
BcoDI	GTCTC	2 cut(s)	410, 1261
BcuI	ACTAGT	1 cut(s)	1153
BfaI	CTAG	4 cut(s)	135, 965, 1103, 1154
BfmI	CTRYAG	2 cut(s)	27, 1173
BfoI	RGCGCY	1 cut(s)	411
BfrI	CTTAAG	1 cut(s)	91
BglI	GCCNNNNNGGC	1 cut(s)	584
Bme1390I	CCNGG	2 cut(s)	323, 662
Bme18I	GGWCC	1 cut(s)	991
BmeT110I	CYCGRG	2 cut(s)	332, 1318
BmgT120I	GGNCC	2 cut(s)	664, 991
BmiI	GGNNCC	4 cut(s)	206, 442, 772, 993
BmrFI	CCNGG	2 cut(s)	323, 662
BmrI	ACTGGG	1 cut(s)	178
BmsI	GCATC	4 cut(s)	375, 929, 1364, 1464
BmuI	ACTGGG	1 cut(s)	178
BpiI	GAAGAC	4 cut(s)	256, 301, 517, 1400
BpmI	CTGGAG	1 cut(s)	644
Bpu10I	CCTNAGC	4 cut(s)	533, 574, 996, 1437
BpuEI	CTTGAG	3 cut(s)	51, 182, 215
BsaAI	YACGTR	2 cut(s)	305, 1384
BsaJI	CCNNGG	1 cut(s)	322
BsaWI	WCCGGW	1 cut(s)	503
BsaXI	ACNNNNNCTCC	4 cut(s)	219, 249, 935, 965
Bsc4I	CCNNNNNNNGG	1 cut(s)	1321
Bse118I	RCCGGY	1 cut(s)	314
Bse1I	ACTGG	4 cut(s)	184, 748, 1230, 1520
BseBI	CCWGG	2 cut(s)	323, 662
BseDI	CCNNGG	1 cut(s)	322
BseGI	GGATG	4 cut(s)	366, 528, 1379, 1461
BseLI	CCNNNNNNNGG	1 cut(s)	1321
BseMII	CTCAG	3 cut(s)	830, 987, 1451
BseNI	ACTGG	4 cut(s)	184, 748, 1230, 1520
BseRI	GAGGAG	1 cut(s)	227
BseSI	GKGCMC	1 cut(s)	445
BseX3I	CGGCCG	1 cut(s)	585
BseYI	CCCAGC	1 cut(s)	1109
Bsh1236I	CGCG	1 cut(s)	1206
Bsh1285I	CGRYCG	1 cut(s)	588
BshFI	GGCC	6 cut(s)	215, 318, 387, 587, 665, 1280
BshNI	GGYRCC	2 cut(s)	440, 770
BsiEI	CGRYCG	1 cut(s)	588
BsiHKAI	GWGCWC	2 cut(s)	78, 1438
BsiHKCI	CYCGRG	2 cut(s)	332, 1318
BsiSI	CCGG	2 cut(s)	315, 504
BsiWI	CGTACG	1 cut(s)	1508
BslFI	GGGAC	1 cut(s)	1574
BslI	CCNNNNNNNGG	1 cut(s)	1321
BsmAI	GTCTC	2 cut(s)	410, 1261
BsmBI	CGTCTC	1 cut(s)	1261
BsmFI	GGGAC	1 cut(s)	1574
BsmI	GAATGC	1 cut(s)	1130
BsnI	GGCC	6 cut(s)	215, 318, 387, 587, 665, 1280
BsoBI	CYCGRG	2 cut(s)	332, 1318
Bsp1286I	GDGCHC	3 cut(s)	78, 445, 1438
Bsp143I	GATC	4 cut(s)	609, 801, 1047, 1426
BspACI	CCGC	7 cut(s)	132, 144, 363, 584, 588, 701, 1204
BspANI	GGCC	6 cut(s)	215, 318, 387, 587, 665, 1280
BspCNI	CTCAG	3 cut(s)	829, 988, 1450
BspFNI	CGCG	1 cut(s)	1206
BspLI	GGNNCC	4 cut(s)	206, 442, 772, 993
BspMAI	CTGCAG	1 cut(s)	31
BspPI	GGATC	2 cut(s)	604, 809
BspQI	GCTCTTC	1 cut(s)	66
BspT107I	GGYRCC	2 cut(s)	440, 770
BspTI	CTTAAG	1 cut(s)	91
BsrFI	RCCGGY	1 cut(s)	314
BsrI	ACTGG	4 cut(s)	184, 748, 1230, 1520
BssAI	RCCGGY	1 cut(s)	314
BssECI	CCNNGG	1 cut(s)	322
BssMI	GATC	4 cut(s)	609, 801, 1047, 1426
BssNAI	GTATAC	1 cut(s)	745
BssSI	CACGAG	1 cut(s)	1534
Bst1107I	GTATAC	1 cut(s)	745
Bst2BI	CACGAG	1 cut(s)	1534
Bst2UI	CCWGG	2 cut(s)	323, 662
Bst4CI	ACNGT	3 cut(s)	440, 605, 1243
Bst6I	CTCTTC	3 cut(s)	66, 245, 1596
BstAFI	CTTAAG	1 cut(s)	91
BstAPI	GCANNNNNTGC	1 cut(s)	724
BstBAI	YACGTR	2 cut(s)	305, 1384
BstC8I	GCNNGC	8 cut(s)	9, 316, 339, 432, 539, 879, 979, 1002
BstDEI	CTNAG	6 cut(s)	533, 574, 728, 816, 996, 1437
BstF5I	GGATG	4 cut(s)	366, 528, 1379, 1461
BstFNI	CGCG	1 cut(s)	1206
BstH2I	RGCGCY	1 cut(s)	411
BstHHI	GCGC	2 cut(s)	34, 410
BstKTI	GATC	4 cut(s)	612, 804, 1050, 1429
BstMAI	GTCTC	2 cut(s)	410, 1261
BstMBI	GATC	4 cut(s)	609, 801, 1047, 1426
BstMCI	CGRYCG	1 cut(s)	588
BstMWI	GCNNNNNNNGC	8 cut(s)	257, 363, 440, 547, 584, 715, 724, 923
BstNI	CCWGG	2 cut(s)	323, 662
BstNSI	RCATGY	1 cut(s)	460
BstSCI	CCNGG	2 cut(s)	321, 660
BstSFI	CTRYAG	2 cut(s)	27, 1173
BstSLI	GKGCMC	1 cut(s)	445
BstUI	CGCG	1 cut(s)	1206
BstV2I	GAAGAC	4 cut(s)	256, 301, 517, 1400
BstZ17I	GTATAC	1 cut(s)	745
BstZI	CGGCCG	1 cut(s)	585
BsuRI	GGCC	6 cut(s)	215, 318, 387, 587, 665, 1280
BtgZI	GCGATG	1 cut(s)	1221
BtsCI	GGATG	4 cut(s)	366, 528, 1379, 1461
BtsI	GCAGTG	1 cut(s)	24
BtsIMutI	CAGTG	2 cut(s)	24, 1237
Cac8I	GCNNGC	8 cut(s)	9, 316, 339, 432, 539, 879, 979, 1002
CciNI	GCGGCCGC	1 cut(s)	585
CfoI	GCGC	2 cut(s)	34, 410
Cfr10I	RCCGGY	1 cut(s)	314
Cfr13I	GGNCC	2 cut(s)	664, 991
Csp6I	GTAC	4 cut(s)	170, 451, 952, 1509
CspCI	CAANNNNNGTGG	2 cut(s)	205, 240
CviAII	CATG	7 cut(s)	140, 219, 391, 457, 858, 1027, 1051
CviQI	GTAC	4 cut(s)	170, 451, 952, 1509
DdeI	CTNAG	6 cut(s)	533, 574, 728, 816, 996, 1437
DpnI	GATC	4 cut(s)	611, 803, 1049, 1428
DpnII	GATC	4 cut(s)	609, 801, 1047, 1426
EaeI	YGGCCR	3 cut(s)	213, 316, 585
EagI	CGGCCG	1 cut(s)	585
Eam1104I	CTCTTC	3 cut(s)	66, 245, 1596
EarI	CTCTTC	3 cut(s)	66, 245, 1596
Ecl136II	GAGCTC	1 cut(s)	76
EclXI	CGGCCG	1 cut(s)	585
Eco24I	GRGCYC	1 cut(s)	78
Eco47I	GGWCC	1 cut(s)	991
Eco47III	AGCGCT	1 cut(s)	409
Eco52I	CGGCCG	1 cut(s)	585
Eco53kI	GAGCTC	1 cut(s)	76
Eco72I	CACGTG	1 cut(s)	305
Eco88I	CYCGRG	2 cut(s)	332, 1318
EcoICRI	GAGCTC	1 cut(s)	76
EcoO109I	RGGNCCY	1 cut(s)	991
EcoRII	CCWGG	2 cut(s)	321, 660
EcoT22I	ATGCAT	1 cut(s)	1028
EcoT38I	GRGCYC	1 cut(s)	78
Esp3I	CGTCTC	1 cut(s)	1261
FaeI	CATG	7 cut(s)	143, 222, 394, 460, 861, 1030, 1054
FalI	AAGNNNNNCTT	2 cut(s)	224, 256
FaqI	GGGAC	1 cut(s)	1574
FatI	CATG	7 cut(s)	139, 218, 390, 456, 857, 1026, 1050
FauI	CCCGC	1 cut(s)	137
FauNDI	CATATG	1 cut(s)	1360
FbaI	TGATCA	1 cut(s)	1047
FblI	GTMKAC	3 cut(s)	600, 744, 825
FokI	GGATG	4 cut(s)	353, 515, 1386, 1468
FriOI	GRGCYC	1 cut(s)	78
FspBI	CTAG	4 cut(s)	135, 965, 1103, 1154
GlaI	GCGC	2 cut(s)	33, 409
GsaI	CCCAGC	1 cut(s)	1113
GsuI	CTGGAG	1 cut(s)	644
HaeII	RGCGCY	1 cut(s)	411
HaeIII	GGCC	6 cut(s)	215, 318, 387, 587, 665, 1280
HapII	CCGG	2 cut(s)	315, 504
HhaI	GCGC	2 cut(s)	34, 410
Hin1II	CATG	7 cut(s)	143, 222, 394, 460, 861, 1030, 1054
Hin6I	GCGC	2 cut(s)	32, 408
HinP1I	GCGC	2 cut(s)	32, 408
HinfI	GANTC	9 cut(s)	113, 119, 149, 418, 563, 1114, 1303, 1392, 1565
HpaII	CCGG	2 cut(s)	315, 504
HphI	GGTGA	1 cut(s)	493
Hpy166II	GTNNAC	5 cut(s)	271, 601, 745, 826, 1531
Hpy188I	TCNGA	6 cut(s)	100, 118, 178, 209, 560, 609
Hpy188III	TCNNGA	4 cut(s)	68, 199, 332, 904
Hpy8I	GTNNAC	5 cut(s)	271, 601, 745, 826, 1531
HpyAV	CCTTC	1 cut(s)	160
HpyCH4III	ACNGT	3 cut(s)	440, 605, 1243
HpyCH4IV	ACGT	2 cut(s)	304, 1383
HpyCH4V	TGCA	9 cut(s)	4, 29, 341, 521, 718, 877, 920, 1026, 1477
HpyF10VI	GCNNNNNNNGC	8 cut(s)	257, 363, 440, 547, 584, 715, 724, 923
HpyF3I	CTNAG	6 cut(s)	533, 574, 728, 816, 996, 1437
HpySE526I	ACGT	2 cut(s)	304, 1383
Hsp92II	CATG	7 cut(s)	143, 222, 394, 460, 861, 1030, 1054
HspAI	GCGC	2 cut(s)	32, 408
KroI	GCCGGC	1 cut(s)	314
KroNI	GCCGGC	1 cut(s)	316
Ksp22I	TGATCA	1 cut(s)	1047
Kzo9I	GATC	4 cut(s)	609, 801, 1047, 1426
LguI	GCTCTTC	1 cut(s)	66
LmnI	GCTCC	6 cut(s)	81, 101, 210, 240, 259, 1206
LweI	GCATC	4 cut(s)	375, 929, 1364, 1464
MaeI	CTAG	4 cut(s)	135, 965, 1103, 1154
MaeII	ACGT	2 cut(s)	304, 1383
MaeIII	GTNAC	3 cut(s)	291, 1147, 1498
MalI	GATC	4 cut(s)	611, 803, 1049, 1428
MboI	GATC	4 cut(s)	609, 801, 1047, 1426
MboII	GAAGA	8 cut(s)	83, 232, 256, 301, 517, 613, 1400, 1583
MfeI	CAATTG	1 cut(s)	1059
MhlI	GDGCHC	3 cut(s)	78, 445, 1438
MlsI	TGGCCA	1 cut(s)	215
MluCI	AATT	6 cut(s)	637, 653, 672, 810, 1043, 1059
MluNI	TGGCCA	1 cut(s)	215
MlyI	GAGTC	3 cut(s)	158, 412, 1559
MmeI	TCCRAC	3 cut(s)	201, 394, 1369
Mox20I	TGGCCA	1 cut(s)	215
Mph1103I	ATGCAT	1 cut(s)	1028
MroNI	GCCGGC	1 cut(s)	314
MscI	TGGCCA	1 cut(s)	215
MseI	TTAA	6 cut(s)	92, 554, 1068, 1296, 1419, 1521
Msp20I	TGGCCA	1 cut(s)	215
MspA1I	CMGCKG	1 cut(s)	344
MspCI	CTTAAG	1 cut(s)	91
MspI	CCGG	2 cut(s)	315, 504
MspR9I	CCNGG	2 cut(s)	323, 662
MunI	CAATTG	1 cut(s)	1059
Mva1269I	GAATGC	1 cut(s)	1130
MvaI	CCWGG	2 cut(s)	323, 662
MvnI	CGCG	1 cut(s)	1206
MwoI	GCNNNNNNNGC	8 cut(s)	257, 363, 440, 547, 584, 715, 724, 923
NaeI	GCCGGC	1 cut(s)	316
NdeI	CATATG	1 cut(s)	1360
NdeII	GATC	4 cut(s)	609, 801, 1047, 1426
NgoMIV	GCCGGC	1 cut(s)	314
NlaIII	CATG	7 cut(s)	143, 222, 394, 460, 861, 1030, 1054
NlaIV	GGNNCC	4 cut(s)	206, 442, 772, 993
NmeAIII	GCCGAG	1 cut(s)	333
NmuCI	GTSAC	1 cut(s)	291
NotI	GCGGCCGC	1 cut(s)	585
NsiI	ATGCAT	1 cut(s)	1028
NspI	RCATGY	1 cut(s)	460
PaeR7I	CTCGAG	1 cut(s)	332
PciI	ACATGT	1 cut(s)	456
PciSI	GCTCTTC	1 cut(s)	66
PctI	GAATGC	1 cut(s)	1130
PdiI	GCCGGC	1 cut(s)	316
PfeI	GAWTC	6 cut(s)	113, 119, 563, 1114, 1303, 1392
Pfl23II	CGTACG	1 cut(s)	1508
PleI	GAGTC	3 cut(s)	157, 412, 1559
PmaCI	CACGTG	1 cut(s)	305
PmlI	CACGTG	1 cut(s)	305
PpsI	GAGTC	3 cut(s)	157, 412, 1559
Ppu21I	YACGTR	2 cut(s)	305, 1384
PpuMI	RGGWCCY	1 cut(s)	991
PscI	ACATGT	1 cut(s)	456
Psp124BI	GAGCTC	1 cut(s)	78
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	2 cut(s)	321, 660
PspCI	CACGTG	1 cut(s)	305
PspFI	CCCAGC	1 cut(s)	1109
PspGI	CCWGG	2 cut(s)	321, 660
PspLI	CGTACG	1 cut(s)	1508
PspN4I	GGNNCC	4 cut(s)	206, 442, 772, 993
PspPI	GGNCC	2 cut(s)	664, 991
PspPPI	RGGWCCY	1 cut(s)	991
PstI	CTGCAG	1 cut(s)	31
PvuII	CAGCTG	1 cut(s)	344
RsaI	GTAC	4 cut(s)	171, 452, 953, 1510
RsaNI	GTAC	4 cut(s)	170, 451, 952, 1509
SacI	GAGCTC	1 cut(s)	78
SapI	GCTCTTC	1 cut(s)	66
SaqAI	TTAA	6 cut(s)	92, 554, 1068, 1296, 1419, 1521
Sau3AI	GATC	4 cut(s)	609, 801, 1047, 1426
Sau96I	GGNCC	2 cut(s)	664, 991
SchI	GAGTC	3 cut(s)	158, 412, 1559
ScrFI	CCNGG	2 cut(s)	323, 662
SduI	GDGCHC	3 cut(s)	78, 445, 1438
SfaNI	GCATC	4 cut(s)	375, 929, 1364, 1464
SfcI	CTRYAG	2 cut(s)	27, 1173
Sfr274I	CTCGAG	1 cut(s)	332
SinI	GGWCC	1 cut(s)	991
SlaI	CTCGAG	1 cut(s)	332
SmlI	CTYRAG	5 cut(s)	66, 91, 161, 230, 332
SmoI	CTYRAG	5 cut(s)	66, 91, 161, 230, 332
SpeI	ACTAGT	1 cut(s)	1153
Sse9I	AATT	6 cut(s)	637, 653, 672, 810, 1043, 1059
SsiI	CCGC	7 cut(s)	132, 144, 363, 584, 588, 701, 1204
SspMI	CTAG	4 cut(s)	135, 965, 1103, 1154
SstI	GAGCTC	1 cut(s)	78
StyD4I	CCNGG	2 cut(s)	321, 660
TaaI	ACNGT	3 cut(s)	440, 605, 1243
TaiI	ACGT	2 cut(s)	307, 1386
TaqI	TCGA	2 cut(s)	333, 1425
TasI	AATT	6 cut(s)	637, 653, 672, 810, 1043, 1059
TauI	GCSGC	4 cut(s)	366, 587, 590, 704
TfiI	GAWTC	6 cut(s)	113, 119, 563, 1114, 1303, 1392
Tru1I	TTAA	6 cut(s)	92, 554, 1068, 1296, 1419, 1521
Tru9I	TTAA	6 cut(s)	92, 554, 1068, 1296, 1419, 1521
TscAI	CASTG	2 cut(s)	31, 1237
TseFI	GTSAC	1 cut(s)	291
Tsp45I	GTSAC	1 cut(s)	291
TspDTI	ATGAA	2 cut(s)	265, 517
TspGWI	ACGGA	2 cut(s)	1260, 1526
TspRI	CASTG	2 cut(s)	31, 1237
Vha464I	CTTAAG	1 cut(s)	91
VpaK11BI	GGWCC	1 cut(s)	991
XapI	RAATTY	1 cut(s)	653
XceI	RCATGY	1 cut(s)	460
XhoI	CTCGAG	1 cut(s)	332
XmiI	GTMKAC	3 cut(s)	600, 744, 825
XspI	CTAG	4 cut(s)	135, 965, 1103, 1154
Zsp2I	ATGCAT	1 cut(s)	1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.