BEST Arabidopsis thaliana protein match is
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16630 AT2G16270 |
| fragaria_vesca | FvH4_2g03070 FvH4_6g23772 |
| prunus_persica | Prupe.8G151500_v2.0.a1 Prupe.8G151700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr6g0247921 |
| rosa_laevigata | RLG00000015172 |
| rosa_multiflora | Rmu_co8497843.1_g000001 Rmu_sc0011977.1_g000002 Rmu_sc0017619.1_g000005 |
| rosa_roxburghii | Rroxscaffold_180G00433180 Rroxscaffold_7G00213580 |
| rosa_rugosa | Rorug05G0529500 |
| rosa_samantha | Rh6AG044300 Rh6BG039100 Rh6CG037900 Rh6DG034900 |
| rosa_wichuraiana | Rw6G003850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 711 |
| Acc36I | ACCTGC | 1 cut(s) | 1955 |
| AccB1I | GGYRCC | 1 cut(s) | 655 |
| AccI | GTMKAC | 3 cut(s) | 465, 1279, 1503 |
| AciI | CCGC | 3 cut(s) | 912, 2337, 2367 |
| AclWI | GGATC | 7 cut(s) | 155, 249, 369, 638, 651, 659, 2516 |
| AcoI | YGGCCR | 2 cut(s) | 1669, 1990 |
| AcsI | RAATTY | 2 cut(s) | 921, 2191 |
| AcuI | CTGAAG | 3 cut(s) | 1479, 1674, 2257 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 2 cut(s) | 1833, 2399 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 275, 397, 403 |
| AhlI | ACTAGT | 1 cut(s) | 1373 |
| AjnI | CCWGG | 1 cut(s) | 396 |
| Alw26I | GTCTC | 6 cut(s) | 375, 424, 636, 1044, 1276, 2488 |
| AlwI | GGATC | 7 cut(s) | 155, 249, 369, 638, 651, 659, 2516 |
| AoxI | GGCC | 3 cut(s) | 692, 1669, 1990 |
| ApeKI | GCWGC | 8 cut(s) | 493, 754, 1778, 2039, 2048, 2092, 2298, 2301 |
| ApoI | RAATTY | 2 cut(s) | 921, 2191 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1315, 1347 |
| AspS9I | GGNCC | 1 cut(s) | 266 |
| AsuC2I | CCSGG | 1 cut(s) | 169 |
| AsuNHI | GCTAGC | 1 cut(s) | 1193 |
| AvaII | GGWCC | 1 cut(s) | 266 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1602, 1635 |
| BalI | TGGCCA | 2 cut(s) | 1671, 1992 |
| BamHI | GGATCC | 1 cut(s) | 643 |
| BanI | GGYRCC | 1 cut(s) | 655 |
| BbsI | GAAGAC | 2 cut(s) | 1344, 2081 |
| BbvCI | CCTCAGC | 1 cut(s) | 1226 |
| BbvI | GCAGC | 8 cut(s) | 505, 766, 1765, 2051, 2060, 2079, 2285, 2313 |
| BccI | CCATC | 9 cut(s) | 337, 399, 884, 929, 1145, 1388, 2020, 2099, 2526 |
| BceAI | ACGGC | 1 cut(s) | 296 |
| BciT130I | CCWGG | 1 cut(s) | 398 |
| BclI | TGATCA | 1 cut(s) | 2166 |
| BcnI | CCSGG | 1 cut(s) | 169 |
| BcoDI | GTCTC | 6 cut(s) | 375, 424, 636, 1044, 1276, 2488 |
| BcuI | ACTAGT | 1 cut(s) | 1373 |
| BfaI | CTAG | 2 cut(s) | 1194, 1374 |
| BfmI | CTRYAG | 5 cut(s) | 807, 957, 1605, 1893, 2299 |
| BfuAI | ACCTGC | 1 cut(s) | 1955 |
| BglII | AGATCT | 3 cut(s) | 27, 118, 345 |
| BisI | GCNGC | 9 cut(s) | 494, 755, 912, 1779, 2040, 2049, 2093, 2299, 2302 |
| BlsI | GCNGC | 9 cut(s) | 495, 756, 913, 1780, 2041, 2050, 2094, 2300, 2303 |
| BmcAI | AGTACT | 1 cut(s) | 2399 |
| Bme1390I | CCNGG | 2 cut(s) | 169, 398 |
| Bme18I | GGWCC | 1 cut(s) | 266 |
| BmgT120I | GGNCC | 1 cut(s) | 266 |
| BmiI | GGNNCC | 5 cut(s) | 280, 645, 657, 1455, 2516 |
| BmrFI | CCNGG | 2 cut(s) | 169, 398 |
| BmsI | GCATC | 8 cut(s) | 114, 450, 486, 742, 1345, 1951, 2079, 2399 |
| BmtI | GCTAGC | 1 cut(s) | 1197 |
| BpiI | GAAGAC | 2 cut(s) | 1344, 2081 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1857, 1889 |
| BpmI | CTGGAG | 2 cut(s) | 1158, 1884 |
| Bpu10I | CCTNAGC | 2 cut(s) | 93, 1226 |
| BpuEI | CTTGAG | 3 cut(s) | 569, 779, 1258 |
| BpuMI | CCSGG | 1 cut(s) | 169 |
| Bsa29I | ATCGAT | 1 cut(s) | 480 |
| BsaBI | GATNNNNATC | 2 cut(s) | 440, 476 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 1276 |
| BsaJI | CCNNGG | 4 cut(s) | 139, 335, 689, 2376 |
| BsaWI | WCCGGW | 2 cut(s) | 113, 1808 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 275, 397, 403 |
| Bse1I | ACTGG | 3 cut(s) | 647, 1366, 2153 |
| Bse8I | GATNNNNATC | 2 cut(s) | 440, 476 |
| BseBI | CCWGG | 1 cut(s) | 398 |
| BseCI | ATCGAT | 1 cut(s) | 480 |
| BseDI | CCNNGG | 4 cut(s) | 139, 335, 689, 2376 |
| BseGI | GGATG | 3 cut(s) | 934, 1055, 1236 |
| BseJI | GATNNNNATC | 2 cut(s) | 440, 476 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 275, 397, 403 |
| BseMII | CTCAG | 6 cut(s) | 710, 866, 1217, 1581, 1888, 2247 |
| BseNI | ACTGG | 3 cut(s) | 647, 1366, 2153 |
| BseRI | GAGGAG | 6 cut(s) | 776, 833, 851, 1304, 2355, 2358 |
| BseXI | GCAGC | 8 cut(s) | 505, 766, 1765, 2051, 2060, 2079, 2285, 2313 |
| BsgI | GTGCAG | 1 cut(s) | 1790 |
| BshFI | GGCC | 3 cut(s) | 694, 1671, 1992 |
| BshNI | GGYRCC | 1 cut(s) | 655 |
| BshVI | ATCGAT | 1 cut(s) | 480 |
| BsiSI | CCGG | 3 cut(s) | 114, 169, 1809 |
| BslFI | GGGAC | 1 cut(s) | 151 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 275, 397, 403 |
| BsmAI | GTCTC | 6 cut(s) | 375, 424, 636, 1044, 1276, 2488 |
| BsmBI | CGTCTC | 1 cut(s) | 2488 |
| BsmFI | GGGAC | 1 cut(s) | 151 |
| BsmI | GAATGC | 1 cut(s) | 197 |
| BsnI | GGCC | 3 cut(s) | 694, 1671, 1992 |
| Bso31I | GGTCTC | 1 cut(s) | 1276 |
| Bsp1407I | TGTACA | 1 cut(s) | 1831 |
| Bsp19I | CCATGG | 1 cut(s) | 2376 |
| BspACI | CCGC | 3 cut(s) | 912, 2337, 2367 |
| BspANI | GGCC | 3 cut(s) | 694, 1671, 1992 |
| BspCNI | CTCAG | 6 cut(s) | 709, 865, 1218, 1582, 1887, 2248 |
| BspDI | ATCGAT | 1 cut(s) | 480 |
| BspHI | TCATGA | 1 cut(s) | 634 |
| BspLI | GGNNCC | 5 cut(s) | 280, 645, 657, 1455, 2516 |
| BspMAI | CTGCAG | 2 cut(s) | 811, 2303 |
| BspMI | ACCTGC | 1 cut(s) | 1955 |
| BspOI | GCTAGC | 1 cut(s) | 1197 |
| BspPI | GGATC | 7 cut(s) | 155, 249, 369, 638, 651, 659, 2516 |
| BspQI | GCTCTTC | 3 cut(s) | 790, 891, 936 |
| BspT107I | GGYRCC | 1 cut(s) | 655 |
| BspTNI | GGTCTC | 1 cut(s) | 1276 |
| BsrGI | TGTACA | 1 cut(s) | 1831 |
| BsrI | ACTGG | 3 cut(s) | 647, 1366, 2153 |
| BssECI | CCNNGG | 4 cut(s) | 139, 335, 689, 2376 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 1 cut(s) | 2376 |
| Bst2UI | CCWGG | 1 cut(s) | 398 |
| Bst4CI | ACNGT | 6 cut(s) | 526, 1038, 1327, 1478, 1831, 1913 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2126 |
| BstAUI | TGTACA | 1 cut(s) | 1831 |
| BstC8I | GCNNGC | 3 cut(s) | 752, 1195, 1587 |
| BstDSI | CCRYGG | 1 cut(s) | 2376 |
| BstF5I | GGATG | 3 cut(s) | 934, 1055, 1236 |
| BstMAI | GTCTC | 6 cut(s) | 375, 424, 636, 1044, 1276, 2488 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 73, 763, 2045, 2048, 2126, 2387 |
| BstNI | CCWGG | 1 cut(s) | 398 |
| BstNSI | RCATGY | 1 cut(s) | 2150 |
| BstSCI | CCNGG | 2 cut(s) | 167, 396 |
| BstSFI | CTRYAG | 5 cut(s) | 807, 957, 1605, 1893, 2299 |
| BstV1I | GCAGC | 8 cut(s) | 505, 766, 1765, 2051, 2060, 2079, 2285, 2313 |
| BstV2I | GAAGAC | 2 cut(s) | 1344, 2081 |
| BstX2I | RGATCY | 5 cut(s) | 27, 118, 160, 345, 643 |
| BstYI | RGATCY | 5 cut(s) | 27, 118, 160, 345, 643 |
| Bsu15I | ATCGAT | 1 cut(s) | 480 |
| BsuRI | GGCC | 3 cut(s) | 694, 1671, 1992 |
| BsuTUI | ATCGAT | 1 cut(s) | 480 |
| BtgI | CCRYGG | 1 cut(s) | 2376 |
| BtgZI | GCGATG | 1 cut(s) | 315 |
| BtsCI | GGATG | 3 cut(s) | 934, 1055, 1236 |
| BtsIMutI | CAGTG | 5 cut(s) | 535, 654, 795, 1483, 1882 |
| BveI | ACCTGC | 1 cut(s) | 1955 |
| Cac8I | GCNNGC | 3 cut(s) | 752, 1195, 1587 |
| CciI | TCATGA | 1 cut(s) | 634 |
| Cfr13I | GGNCC | 1 cut(s) | 266 |
| ClaI | ATCGAT | 1 cut(s) | 480 |
| CseI | GACGC | 2 cut(s) | 116, 1757 |
| CsiI | ACCWGGT | 1 cut(s) | 396 |
| Csp6I | GTAC | 2 cut(s) | 1832, 2398 |
| CviQI | GTAC | 2 cut(s) | 1832, 2398 |
| EaeI | YGGCCR | 2 cut(s) | 1669, 1990 |
| Eco130I | CCWWGG | 1 cut(s) | 2376 |
| Eco147I | AGGCCT | 1 cut(s) | 694 |
| Eco31I | GGTCTC | 1 cut(s) | 1276 |
| Eco47I | GGWCC | 1 cut(s) | 266 |
| Eco57I | CTGAAG | 3 cut(s) | 1479, 1674, 2257 |
| EcoRII | CCWGG | 1 cut(s) | 396 |
| EcoT14I | CCWWGG | 1 cut(s) | 2376 |
| ErhI | CCWWGG | 1 cut(s) | 2376 |
| Esp3I | CGTCTC | 1 cut(s) | 2488 |
| FaqI | GGGAC | 1 cut(s) | 151 |
| FauNDI | CATATG | 2 cut(s) | 2419, 2437 |
| FbaI | TGATCA | 1 cut(s) | 2166 |
| FblI | GTMKAC | 3 cut(s) | 465, 1279, 1503 |
| Fnu4HI | GCNGC | 9 cut(s) | 494, 755, 912, 1779, 2040, 2049, 2093, 2299, 2302 |
| FokI | GGATG | 3 cut(s) | 941, 1042, 1243 |
| Fsp4HI | GCNGC | 9 cut(s) | 494, 755, 912, 1779, 2040, 2049, 2093, 2299, 2302 |
| FspBI | CTAG | 2 cut(s) | 1194, 1374 |
| GluI | GCNGC | 9 cut(s) | 494, 755, 912, 1779, 2040, 2049, 2093, 2299, 2302 |
| GsuI | CTGGAG | 2 cut(s) | 1158, 1884 |
| HaeIII | GGCC | 3 cut(s) | 694, 1671, 1992 |
| HapII | CCGG | 3 cut(s) | 114, 169, 1809 |
| HgaI | GACGC | 2 cut(s) | 116, 1757 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| HincII | GTYRAC | 2 cut(s) | 830, 1371 |
| HindII | GTYRAC | 2 cut(s) | 830, 1371 |
| HindIII | AAGCTT | 1 cut(s) | 574 |
| HpaII | CCGG | 3 cut(s) | 114, 169, 1809 |
| Hpy166II | GTNNAC | 7 cut(s) | 466, 830, 1280, 1371, 1504, 1555, 1621 |
| Hpy8I | GTNNAC | 7 cut(s) | 466, 830, 1280, 1371, 1504, 1555, 1621 |
| Hpy99I | CGWCG | 3 cut(s) | 132, 1123, 1751 |
| HpyCH4III | ACNGT | 6 cut(s) | 526, 1038, 1327, 1478, 1831, 1913 |
| HpyCH4IV | ACGT | 2 cut(s) | 1121, 2497 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 73, 763, 2045, 2048, 2126, 2387 |
| HpySE526I | ACGT | 2 cut(s) | 1121, 2497 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Ksp22I | TGATCA | 1 cut(s) | 2166 |
| LguI | GCTCTTC | 3 cut(s) | 790, 891, 936 |
| LmnI | GCTCC | 1 cut(s) | 763 |
| Lsp1109I | GCAGC | 8 cut(s) | 505, 766, 1765, 2051, 2060, 2079, 2285, 2313 |
| LweI | GCATC | 8 cut(s) | 114, 450, 486, 742, 1345, 1951, 2079, 2399 |
| MabI | ACCWGGT | 1 cut(s) | 396 |
| MaeI | CTAG | 2 cut(s) | 1194, 1374 |
| MaeII | ACGT | 2 cut(s) | 1121, 2497 |
| MaeIII | GTNAC | 4 cut(s) | 294, 684, 1790, 2462 |
| MflI | RGATCY | 5 cut(s) | 27, 118, 160, 345, 643 |
| MlsI | TGGCCA | 2 cut(s) | 1671, 1992 |
| MluCI | AATT | 9 cut(s) | 303, 568, 676, 726, 921, 1310, 1563, 1857, 2191 |
| MluNI | TGGCCA | 2 cut(s) | 1671, 1992 |
| MlyI | GAGTC | 1 cut(s) | 638 |
| MmeI | TCCRAC | 3 cut(s) | 293, 1052, 1770 |
| Mox20I | TGGCCA | 2 cut(s) | 1671, 1992 |
| MscI | TGGCCA | 2 cut(s) | 1671, 1992 |
| MseI | TTAA | 3 cut(s) | 1164, 1956, 2322 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2103 |
| Msp20I | TGGCCA | 2 cut(s) | 1671, 1992 |
| MspA1I | CMGCKG | 2 cut(s) | 2051, 2298 |
| MspI | CCGG | 3 cut(s) | 114, 169, 1809 |
| MspR9I | CCNGG | 2 cut(s) | 169, 398 |
| Mva1269I | GAATGC | 1 cut(s) | 197 |
| MvaI | CCWGG | 1 cut(s) | 398 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 73, 763, 2045, 2048, 2126, 2387 |
| NciI | CCSGG | 1 cut(s) | 169 |
| NcoI | CCATGG | 1 cut(s) | 2376 |
| NdeI | CATATG | 2 cut(s) | 2419, 2437 |
| NheI | GCTAGC | 1 cut(s) | 1193 |
| NlaIV | GGNNCC | 5 cut(s) | 280, 645, 657, 1455, 2516 |
| NmeAIII | GCCGAG | 1 cut(s) | 360 |
| NmuCI | GTSAC | 3 cut(s) | 294, 684, 2462 |
| NspI | RCATGY | 1 cut(s) | 2150 |
| PagI | TCATGA | 1 cut(s) | 634 |
| PceI | AGGCCT | 1 cut(s) | 694 |
| PciSI | GCTCTTC | 3 cut(s) | 790, 891, 936 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 136, 161, 255, 419 |
| PctI | GAATGC | 1 cut(s) | 197 |
| PfoI | TCCNGGA | 1 cut(s) | 167 |
| PkrI | GCNGC | 9 cut(s) | 495, 756, 913, 1780, 2041, 2050, 2094, 2300, 2303 |
| PleI | GAGTC | 1 cut(s) | 637 |
| PpsI | GAGTC | 1 cut(s) | 637 |
| PsiI | TTATAA | 1 cut(s) | 711 |
| Psp6I | CCWGG | 1 cut(s) | 396 |
| PspGI | CCWGG | 1 cut(s) | 396 |
| PspN4I | GGNNCC | 5 cut(s) | 280, 645, 657, 1455, 2516 |
| PspPI | GGNCC | 1 cut(s) | 266 |
| PstI | CTGCAG | 2 cut(s) | 811, 2303 |
| PsuI | RGATCY | 5 cut(s) | 27, 118, 160, 345, 643 |
| PvuII | CAGCTG | 2 cut(s) | 2051, 2298 |
| RsaI | GTAC | 2 cut(s) | 1833, 2399 |
| RsaNI | GTAC | 2 cut(s) | 1832, 2398 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2103 |
| SapI | GCTCTTC | 3 cut(s) | 790, 891, 936 |
| SaqAI | TTAA | 3 cut(s) | 1164, 1956, 2322 |
| SatI | GCNGC | 9 cut(s) | 494, 755, 912, 1779, 2040, 2049, 2093, 2299, 2302 |
| Sau96I | GGNCC | 1 cut(s) | 266 |
| ScaI | AGTACT | 1 cut(s) | 2399 |
| SchI | GAGTC | 1 cut(s) | 638 |
| ScrFI | CCNGG | 2 cut(s) | 169, 398 |
| SexAI | ACCWGGT | 1 cut(s) | 396 |
| SfaNI | GCATC | 8 cut(s) | 114, 450, 486, 742, 1345, 1951, 2079, 2399 |
| SfcI | CTRYAG | 5 cut(s) | 807, 957, 1605, 1893, 2299 |
| SinI | GGWCC | 1 cut(s) | 266 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2103 |
| SmlI | CTYRAG | 3 cut(s) | 548, 758, 1273 |
| SmoI | CTYRAG | 3 cut(s) | 548, 758, 1273 |
| SpeI | ACTAGT | 1 cut(s) | 1373 |
| Sse9I | AATT | 9 cut(s) | 303, 568, 676, 726, 921, 1310, 1563, 1857, 2191 |
| SseBI | AGGCCT | 1 cut(s) | 694 |
| SsiI | CCGC | 3 cut(s) | 912, 2337, 2367 |
| SspMI | CTAG | 2 cut(s) | 1194, 1374 |
| StuI | AGGCCT | 1 cut(s) | 694 |
| StyD4I | CCNGG | 2 cut(s) | 167, 396 |
| StyI | CCWWGG | 1 cut(s) | 2376 |
| TaaI | ACNGT | 6 cut(s) | 526, 1038, 1327, 1478, 1831, 1913 |
| TaiI | ACGT | 2 cut(s) | 1124, 2500 |
| TaqI | TCGA | 6 cut(s) | 373, 480, 537, 1527, 2018, 2142 |
| TasI | AATT | 9 cut(s) | 303, 568, 676, 726, 921, 1310, 1563, 1857, 2191 |
| TatI | WGTACW | 2 cut(s) | 1831, 2397 |
| TauI | GCSGC | 1 cut(s) | 914 |
| Tru1I | TTAA | 3 cut(s) | 1164, 1956, 2322 |
| Tru9I | TTAA | 3 cut(s) | 1164, 1956, 2322 |
| TscAI | CASTG | 5 cut(s) | 535, 654, 802, 1483, 1882 |
| TseFI | GTSAC | 3 cut(s) | 294, 684, 2462 |
| TseI | GCWGC | 8 cut(s) | 493, 754, 1778, 2039, 2048, 2092, 2298, 2301 |
| Tsp45I | GTSAC | 3 cut(s) | 294, 684, 2462 |
| TspGWI | ACGGA | 2 cut(s) | 153, 1638 |
| TspRI | CASTG | 5 cut(s) | 535, 654, 802, 1483, 1882 |
| VpaK11BI | GGWCC | 1 cut(s) | 266 |
| XapI | RAATTY | 2 cut(s) | 921, 2191 |
| XceI | RCATGY | 1 cut(s) | 2150 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2525 |
| XmiI | GTMKAC | 3 cut(s) | 465, 1279, 1503 |
| XspI | CTAG | 2 cut(s) | 1194, 1374 |
| ZrmI | AGTACT | 1 cut(s) | 2399 |