Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000180

Orthogroup ID

OG0012059

Physical Location & Seq

Genomic Coordinates Reverse (-)

21861 .. 24744

Gene Structure 2884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_180G00433180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGCCGCGCCGCCGTCGAACAAGTCCCCAATCGCGACCCGAGCAAGCCCTAATTCCCGAAGCTCCGAAATCGCCAACCCCGTCCGGCGAAGCTTCACCGGAAACCCATTCGCCAAGCCTTCAGTCGTCGCTAATTCAGAGACTCCTCCTCCACGGCGAAGCTCCATGGGCAGAGAGACGGTGGTTACTTTTTCGGAGGACAAAGAAAACGGGAAAGATTCGAGTTGGAAACAAATCCGGGTCCGGTCGCCGGCGGCGAAGAATTTCATGTCGCCGACCATCTCCGCCGCCTCAAAGATCAACGCTTCTCCGAGAAAGAAGATCTTGACCGAGAGGAACGAGCCCGTCCGGACTTCTTCTTCTTCTTCTTCTTCTTCCGAGTTCAAAATCAAAAGCGTGTCCTTTGCTCCGGTACCGGTGGAATATTCCGTTCACAAGGAGGAGGTGGGGCCCACAACCCCACCTGTGGTGGTGGTTTCTAAGCCTCCGAAACCCTCTGAAGCAATGGTGGGGACACCTGAATGCCCTGAACCTGTTTGTGAAAATGTCTCTGAGGAACAACCTGACTGTGTGAATCTTGACCCGAGTTTCAAGATTAGTCCTCCGGCGTTGGCTGCGTTTTCGGGTTCGGGTCATCGGGTCATTGCGCCGCTGGATGCTGACCCATCTGCTCCTCCTCCTTATGATCCCAAGACCAATTACCTTTCTCCCAGGCCACAGTTTCTTCATTACAGGCCAAACCCAAGAGTTGAGTATTATCTGAGTAAGGATGGTGAGGGCAAGAGGCTTGAGGAGAGCTTTTCGGATACTGAGGAAACCCGATCGGATTATTCTCCGAAGGAAGTAGAAGATGTTACTTCCCCTGCTGAAGTCGTAAAGGAGGAGGAGGAGGAAGAAGAAGTAAAAGAGGAGGAGGTACCTGTTTCGGAACCAATGCCCACCATCATCAGTCCCAGCACTAAGTCTATGCCAAAGGAGGAGGAGGCTGTTGAAGTAGAAGAGTCCAGCAAGCCGCGCTTCTCGTGGAGATCAAAGTTCACTGCTTTGATAATGGTTTTGGCAGTTGCGCTTTTCGCGGTTTTGGCTGTTGAAGTGAATGTTCAGGTTTGGTCTGCAAGCTCTGTGTCTTTTGTTTCTGAGTTCATTTCCAGTATCAGAGGTGCCAAGAATTTAGGCCCGTTGCAATATTATAACCTCACCTTGATGGAAGATGCTCAGGTTAATGAGTATTCTGTGTTTGATCAATGTAACAAAGAAATGGAAGAAATGGGTGAGTTTGATGTGTTTGGAAATGTAATGGGAAGTGTGTTTGAGGTTGAAGCTTCGGAAGAAAGGGGTCTGCAAGAGATTGGAGCAGCTGAATATGAAGAACCAATTGATCAGGAAGCTGGTCTGGCAGAGATTGGAGCAGCTGAATATGCAGAACCAATTTATCAGGAGGCTGAAGTACCTCAGATTGAATGCTTGGAAGAGAACCAGCCAGAGATTGGAGCCGACGATGTGGAGGAACATGTTGAGCAAGGGAATGAACAAGTTGAGAATATTGAAGCTTTAGAAGAAGAAATGAGACTTTCAGTGATCAGAGCAACTGAGAACCTCGTTGAAGTACATACTGATCCAGAATTTGAGGAAAAGGCTGAATCAACCAACATGGAAGAGGTTTCACTGGAAAAGAATTCTTATGAAGATGTGGAAGCACCTCAGGCTACACAGGCTATAACTGAAGAAAATATTGTTGTTGATCATGTACATTCTGAGCCAGAAAGTATTGCAAGCATTAAGGAGGAGATTGTAAGCTCAGAAGTATTGAATCTCACAGCTGAGGGGGCTGACAGTATGGTTTCCATGGCGAATGTGCTGGGAATTGCTTTCTTAGTTCTCACATTGGTCGGATTCACAGCGATCATCTACATGAAGAAACGAGAGAACTCACCTTCAAATCCTGCAAACTATGATGTTCAACCATTGGTGACCGAGAAATTAGCTGGAAGTCCCATTGTTCCAATTAGCACTGAGCACACCTACTGTCCTTCTGAAATGAGTAGCTTCCAGACAAGTTCAGGGTACCGCTCAAAAGGACTAAAGGCATCAGATGAAGTGGAAAGCCAGGAGAAGAGGGCCAGGAAGAACAACAGGAGAGACTCTATGGCTTCAATTGACTCCTCAATGGGGTCGCCATCTTATGGGAGTTTTACAACATATGAGAGAATTCCAATTAAGAAGGGATATGGAGAAGAAGAGATTGTAACTCCTGTTAGGCGCTCGAGCAGAATTACTAGGAAAGTCACTTCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

765

Amino Acids

84.28

Weight (kDa)

4.6

Isoelectric Point (pI)

71.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16630 AT2G16270
fragaria_vesca	FvH4_2g03070 FvH4_6g23772
prunus_persica	Prupe.8G151500_v2.0.a1 Prupe.8G151700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0247921
rosa_laevigata	RLG00000015172
rosa_multiflora	Rmu_co8497843.1_g000001 Rmu_sc0011977.1_g000002 Rmu_sc0017619.1_g000005
rosa_roxburghii	Rroxscaffold_180G00433180 Rroxscaffold_7G00213580
rosa_rugosa	Rorug05G0529500
rosa_samantha	Rh6AG044300 Rh6BG039100 Rh6CG037900 Rh6DG034900
rosa_wichuraiana	Rw6G003850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1191
Acc65I	GGTACC	3 cut(s)	412, 916, 2064
AccB1I	GGYRCC	4 cut(s)	412, 916, 1160, 2064
AccB7I	CCANNNNNTGG	2 cut(s)	1487, 2183
AccBSI	CCGCTC	1 cut(s)	2070
AccII	CGCG	4 cut(s)	8, 35, 1015, 1076
AccIII	TCCGGA	1 cut(s)	348
AciI	CCGC	9 cut(s)	6, 11, 254, 285, 288, 650, 1013, 1076, 2068
AclWI	GGATC	2 cut(s)	680, 1610
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	262, 1168, 1622, 1675, 2208
AcuI	CTGAAG	5 cut(s)	105, 519, 888, 1464, 1743
AfaI	GTAC	6 cut(s)	414, 918, 1449, 1608, 1749, 2066
AfiI	CCNNNNNNNGG	5 cut(s)	250, 466, 1487, 2169, 2183
AflIII	ACRYGT	1 cut(s)	1510
AgeI	ACCGGT	1 cut(s)	415
AjnI	CCWGG	3 cut(s)	710, 2106, 2120
Alw21I	GWGCWC	1 cut(s)	2019
Alw26I	GTCTC	5 cut(s)	134, 170, 553, 1561, 2133
AlwI	GGATC	2 cut(s)	680, 1610
Ama87I	CYCGRG	3 cut(s)	39, 583, 2263
Aor13HI	TCCGGA	1 cut(s)	348
AoxI	GGCC	6 cut(s)	3, 449, 713, 734, 1174, 2118
ApaI	GGGCCC	1 cut(s)	453
ApeKI	GCWGC	3 cut(s)	614, 1355, 1409
ApoI	RAATTY	5 cut(s)	262, 1168, 1622, 1675, 2208
AsiGI	ACCGGT	1 cut(s)	415
Asp700I	GAANNNNTTC	1 cut(s)	263
Asp718I	GGTACC	3 cut(s)	412, 916, 2064
AspLEI	GCGC	5 cut(s)	10, 649, 1017, 1069, 2262
AspS9I	GGNCC	5 cut(s)	241, 449, 450, 1175, 2118
AsuC2I	CCSGG	1 cut(s)	239
AsuHPI	GGTGA	6 cut(s)	88, 785, 1189, 1283, 1923, 1981
AvaI	CYCGRG	3 cut(s)	39, 583, 2263
AvaII	GGWCC	1 cut(s)	241
AxyI	CCTNAGG	1 cut(s)	1701
BaeGI	GKGCMC	1 cut(s)	453
BanI	GGYRCC	4 cut(s)	412, 916, 1160, 2064
BanII	GRGCYC	2 cut(s)	345, 453
BauI	CACGAG	1 cut(s)	1021
Bbv12I	GWGCWC	1 cut(s)	2019
BbvCI	CCTCAGC	1 cut(s)	1821
BbvI	GCAGC	3 cut(s)	601, 1367, 1421
BccI	CCATC	6 cut(s)	287, 673, 764, 950, 1198, 2185
BceAI	ACGGC	1 cut(s)	170
BciT130I	CCWGG	3 cut(s)	712, 2108, 2122
BciVI	GTATCC	1 cut(s)	799
BclI	TGATCA	4 cut(s)	1240, 1378, 1578, 1741
BcnI	CCSGG	1 cut(s)	239
BcoDI	GTCTC	5 cut(s)	134, 170, 553, 1561, 2133
BfaI	CTAG	1 cut(s)	2277
BfoI	RGCGCY	1 cut(s)	2263
BfuI	GTATCC	1 cut(s)	799
BglII	AGATCT	1 cut(s)	321
BisI	GCNGC	9 cut(s)	6, 11, 255, 288, 615, 650, 1013, 1356, 1410
BlsI	GCNGC	9 cut(s)	7, 12, 256, 289, 616, 651, 1014, 1357, 1411
Bme1390I	CCNGG	4 cut(s)	239, 712, 2108, 2122
Bme18I	GGWCC	1 cut(s)	241
BmeT110I	CYCGRG	3 cut(s)	39, 583, 2263
BmgT120I	GGNCC	5 cut(s)	241, 449, 450, 1175, 2118
BmiI	GGNNCC	9 cut(s)	242, 414, 450, 451, 918, 930, 1162, 1492, 2066
BmrFI	CCNGG	4 cut(s)	239, 712, 2108, 2122
BmsI	GCATC	3 cut(s)	646, 1201, 2096
Bpu10I	CCTNAGC	2 cut(s)	1215, 1821
BpuEI	CTTGAG	1 cut(s)	809
BpuMI	CCSGG	1 cut(s)	239
BsaJI	CCNNGG	4 cut(s)	152, 165, 710, 1845
BsaWI	WCCGGW	5 cut(s)	98, 243, 348, 409, 415
BsaXI	ACNNNNNCTCC	2 cut(s)	133, 163
Bsc4I	CCNNNNNNNGG	5 cut(s)	250, 466, 1487, 2169, 2183
Bse118I	RCCGGY	2 cut(s)	250, 415
Bse1I	ACTGG	2 cut(s)	1149, 1671
Bse21I	CCTNAGG	1 cut(s)	1701
Bse3DI	GCAATG	2 cut(s)	510, 642
BseAI	TCCGGA	1 cut(s)	348
BseBI	CCWGG	3 cut(s)	712, 2108, 2122
BseDI	CCNNGG	4 cut(s)	152, 165, 710, 1845
BseGI	GGATG	2 cut(s)	661, 775
BseLI	CCNNNNNNNGG	5 cut(s)	250, 466, 1487, 2169, 2183
BseMI	GCAATG	2 cut(s)	510, 642
BseNI	ACTGG	2 cut(s)	1149, 1671
BseSI	GKGCMC	1 cut(s)	453
BseXI	GCAGC	3 cut(s)	601, 1367, 1421
BseYI	CCCAGC	2 cut(s)	953, 1858
Bsh1236I	CGCG	4 cut(s)	8, 35, 1015, 1076
Bsh1285I	CGRYCG	2 cut(s)	248, 824
BshFI	GGCC	6 cut(s)	5, 451, 715, 736, 1176, 2120
BshNI	GGYRCC	4 cut(s)	412, 916, 1160, 2064
BshTI	ACCGGT	1 cut(s)	415
BsiEI	CGRYCG	2 cut(s)	248, 824
BsiHKAI	GWGCWC	1 cut(s)	2019
BsiHKCI	CYCGRG	3 cut(s)	39, 583, 2263
BsiSI	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 410, 416, 605
BslFI	GGGAC	4 cut(s)	10, 526, 936, 1977
BslI	CCNNNNNNNGG	5 cut(s)	250, 466, 1487, 2169, 2183
BsmAI	GTCTC	5 cut(s)	134, 170, 553, 1561, 2133
BsmBI	CGTCTC	1 cut(s)	170
BsmFI	GGGAC	4 cut(s)	10, 526, 936, 1977
BsmI	GAATGC	2 cut(s)	527, 1466
BsnI	GGCC	6 cut(s)	5, 451, 715, 736, 1176, 2120
BsoBI	CYCGRG	3 cut(s)	39, 583, 2263
Bsp120I	GGGCCC	1 cut(s)	449
Bsp1286I	GDGCHC	3 cut(s)	345, 453, 2019
Bsp13I	TCCGGA	1 cut(s)	348
Bsp1407I	TGTACA	1 cut(s)	1747
Bsp19I	CCATGG	2 cut(s)	165, 1845
Bsp68I	TCGCGA	1 cut(s)	35
BspACI	CCGC	9 cut(s)	6, 11, 254, 285, 288, 650, 1013, 1076, 2068
BspANI	GGCC	6 cut(s)	5, 451, 715, 736, 1176, 2120
BspEI	TCCGGA	1 cut(s)	348
BspFNI	CGCG	4 cut(s)	8, 35, 1015, 1076
BspLI	GGNNCC	9 cut(s)	242, 414, 450, 451, 918, 930, 1162, 1492, 2066
BspPI	GGATC	2 cut(s)	680, 1610
BspT107I	GGYRCC	4 cut(s)	412, 916, 1160, 2064
BsrBI	CCGCTC	1 cut(s)	2070
BsrDI	GCAATG	2 cut(s)	510, 642
BsrFI	RCCGGY	2 cut(s)	250, 415
BsrGI	TGTACA	1 cut(s)	1747
BsrI	ACTGG	2 cut(s)	1149, 1671
BssAI	RCCGGY	2 cut(s)	250, 415
BssECI	CCNNGG	4 cut(s)	152, 165, 710, 1845
BssSI	CACGAG	1 cut(s)	1021
BssT1I	CCWWGG	2 cut(s)	165, 1845
Bst2BI	CACGAG	1 cut(s)	1021
Bst2UI	CCWGG	3 cut(s)	712, 2108, 2122
Bst4CI	ACNGT	5 cut(s)	181, 569, 720, 1835, 2027
Bst6I	CTCTTC	5 cut(s)	993, 1464, 1650, 2108, 2232
BstAUI	TGTACA	1 cut(s)	1747
BstC8I	GCNNGC	5 cut(s)	46, 252, 1010, 1117, 1774
BstDSI	CCRYGG	3 cut(s)	152, 165, 1845
BstEII	GGTNACC	1 cut(s)	1969
BstF5I	GGATG	2 cut(s)	661, 775
BstFNI	CGCG	4 cut(s)	8, 35, 1015, 1076
BstH2I	RGCGCY	1 cut(s)	2263
BstHHI	GCGC	5 cut(s)	10, 649, 1017, 1069, 2262
BstMAI	GTCTC	5 cut(s)	134, 170, 553, 1561, 2133
BstMCI	CGRYCG	2 cut(s)	248, 824
BstNI	CCWGG	3 cut(s)	712, 2108, 2122
BstNSI	RCATGY	1 cut(s)	1514
BstPI	GGTNACC	1 cut(s)	1969
BstSCI	CCNGG	4 cut(s)	237, 710, 2106, 2120
BstSLI	GKGCMC	1 cut(s)	453
BstUI	CGCG	4 cut(s)	8, 35, 1015, 1076
BstV1I	GCAGC	3 cut(s)	601, 1367, 1421
BstX2I	RGATCY	1 cut(s)	321
BstYI	RGATCY	1 cut(s)	321
Bsu36I	CCTNAGG	1 cut(s)	1701
BsuI	GTATCC	1 cut(s)	799
BsuRI	GGCC	6 cut(s)	5, 451, 715, 736, 1176, 2120
BtgI	CCRYGG	3 cut(s)	152, 165, 1845
BtsCI	GGATG	2 cut(s)	661, 775
BtsI	GCAGTG	1 cut(s)	1038
BtsIMutI	CAGTG	4 cut(s)	1038, 1581, 1664, 2010
BtuMI	TCGCGA	1 cut(s)	35
Cac8I	GCNNGC	5 cut(s)	46, 252, 1010, 1117, 1774
CfoI	GCGC	5 cut(s)	10, 649, 1017, 1069, 2262
Cfr10I	RCCGGY	2 cut(s)	250, 415
Cfr13I	GGNCC	5 cut(s)	241, 449, 450, 1175, 2118
Csp6I	GTAC	6 cut(s)	413, 917, 1448, 1607, 1748, 2065
CspAI	ACCGGT	1 cut(s)	415
CviAII	CATG	7 cut(s)	166, 268, 1511, 1651, 1745, 1846, 1912
CviQI	GTAC	6 cut(s)	413, 917, 1448, 1607, 1748, 2065
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	5 cut(s)	993, 1464, 1650, 2108, 2232
EarI	CTCTTC	5 cut(s)	993, 1464, 1650, 2108, 2232
EciI	GGCGGA	1 cut(s)	274
Eco130I	CCWWGG	2 cut(s)	165, 1845
Eco24I	GRGCYC	2 cut(s)	345, 453
Eco47I	GGWCC	1 cut(s)	241
Eco57I	CTGAAG	5 cut(s)	105, 519, 888, 1464, 1743
Eco81I	CCTNAGG	1 cut(s)	1701
Eco88I	CYCGRG	3 cut(s)	39, 583, 2263
Eco91I	GGTNACC	1 cut(s)	1969
EcoO109I	RGGNCCY	1 cut(s)	449
EcoO65I	GGTNACC	1 cut(s)	1969
EcoRI	GAATTC	2 cut(s)	1675, 2208
EcoRII	CCWGG	3 cut(s)	710, 2106, 2120
EcoT14I	CCWWGG	2 cut(s)	165, 1845
EcoT38I	GRGCYC	2 cut(s)	345, 453
ErhI	CCWWGG	2 cut(s)	165, 1845
Esp3I	CGTCTC	1 cut(s)	170
FaeI	CATG	7 cut(s)	169, 271, 1514, 1654, 1748, 1849, 1915
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 1001, 1033
FaqI	GGGAC	4 cut(s)	10, 526, 936, 1977
FatI	CATG	7 cut(s)	165, 267, 1510, 1650, 1744, 1845, 1911
FauNDI	CATATG	1 cut(s)	2200
FbaI	TGATCA	4 cut(s)	1240, 1378, 1578, 1741
Fnu4HI	GCNGC	9 cut(s)	6, 11, 255, 288, 615, 650, 1013, 1356, 1410
FokI	GGATG	2 cut(s)	668, 782
FriOI	GRGCYC	2 cut(s)	345, 453
Fsp4HI	GCNGC	9 cut(s)	6, 11, 255, 288, 615, 650, 1013, 1356, 1410
FspBI	CTAG	1 cut(s)	2277
GlaI	GCGC	5 cut(s)	9, 648, 1016, 1068, 2261
GluI	GCNGC	9 cut(s)	6, 11, 255, 288, 615, 650, 1013, 1356, 1410
GsaI	CCCAGC	2 cut(s)	957, 1862
HaeII	RGCGCY	1 cut(s)	2263
HaeIII	GGCC	6 cut(s)	5, 451, 715, 736, 1176, 2120
HapII	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 410, 416, 605
HhaI	GCGC	5 cut(s)	10, 649, 1017, 1069, 2262
Hin1II	CATG	7 cut(s)	169, 271, 1514, 1654, 1748, 1849, 1915
Hin6I	GCGC	5 cut(s)	8, 647, 1015, 1067, 2260
HinP1I	GCGC	5 cut(s)	8, 647, 1015, 1067, 2260
HindIII	AAGCTT	3 cut(s)	91, 1320, 1548
HinfI	GANTC	9 cut(s)	142, 218, 574, 1001, 1640, 1810, 1893, 2141, 2159
HpaII	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 410, 416, 605
HphI	GGTGA	6 cut(s)	88, 785, 1189, 1283, 1923, 1981
Hpy166II	GTNNAC	2 cut(s)	433, 1038
Hpy8I	GTNNAC	2 cut(s)	433, 1038
Hpy99I	CGWCG	3 cut(s)	19, 131, 1499
HpyAV	CCTTC	5 cut(s)	129, 832, 1944, 2040, 2215
HpyCH4III	ACNGT	5 cut(s)	181, 569, 720, 1835, 2027
HpyCH4V	TGCA	6 cut(s)	1115, 1183, 1342, 1421, 1772, 1946
Hsp92II	CATG	7 cut(s)	169, 271, 1514, 1654, 1748, 1849, 1915
HspAI	GCGC	5 cut(s)	8, 647, 1015, 1067, 2260
Kpn2I	TCCGGA	1 cut(s)	348
KpnI	GGTACC	3 cut(s)	416, 920, 2068
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Ksp22I	TGATCA	4 cut(s)	1240, 1378, 1578, 1741
LmnI	GCTCC	7 cut(s)	68, 167, 412, 676, 1352, 1406, 1490
Lsp1109I	GCAGC	3 cut(s)	601, 1367, 1421
LweI	GCATC	3 cut(s)	646, 1201, 2096
MaeI	CTAG	1 cut(s)	2277
MaeIII	GTNAC	6 cut(s)	184, 853, 1247, 1969, 2245, 2284
MbiI	CCGCTC	1 cut(s)	2070
MfeI	CAATTG	2 cut(s)	1374, 2154
MflI	RGATCY	1 cut(s)	321
MhlI	GDGCHC	3 cut(s)	345, 453, 2019
MlyI	GAGTC	4 cut(s)	136, 1010, 2135, 2153
MmeI	TCCRAC	2 cut(s)	206, 1870
MreI	CGCCGGCG	1 cut(s)	250
MroI	TCCGGA	1 cut(s)	348
MroNI	GCCGGC	1 cut(s)	250
MroXI	GAANNNNTTC	1 cut(s)	263
MseI	TTAA	3 cut(s)	1221, 1779, 2217
MslI	CAYNNNNRTG	3 cut(s)	520, 1202, 1910
MspA1I	CMGCKG	4 cut(s)	652, 1358, 1412, 1820
MspI	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 410, 416, 605
MspR9I	CCNGG	4 cut(s)	239, 712, 2108, 2122
MunI	CAATTG	2 cut(s)	1374, 2154
Mva1269I	GAATGC	2 cut(s)	527, 1466
MvaI	CCWGG	3 cut(s)	712, 2108, 2122
MvnI	CGCG	4 cut(s)	8, 35, 1015, 1076
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	1 cut(s)	239
NcoI	CCATGG	2 cut(s)	165, 1845
NdeI	CATATG	1 cut(s)	2200
NgoMIV	GCCGGC	1 cut(s)	250
NlaIII	CATG	7 cut(s)	169, 271, 1514, 1654, 1748, 1849, 1915
NlaIV	GGNNCC	9 cut(s)	242, 414, 450, 451, 918, 930, 1162, 1492, 2066
NmuCI	GTSAC	2 cut(s)	1969, 2284
NruI	TCGCGA	1 cut(s)	35
NspI	RCATGY	1 cut(s)	1514
PaeR7I	CTCGAG	1 cut(s)	2263
PciI	ACATGT	1 cut(s)	1510
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 254
PctI	GAATGC	2 cut(s)	527, 1466
PdiI	GCCGGC	1 cut(s)	252
PdmI	GAANNNNTTC	1 cut(s)	263
PfeI	GAWTC	5 cut(s)	218, 574, 1640, 1810, 1893
PflMI	CCANNNNNTGG	2 cut(s)	1487, 2183
PinAI	ACCGGT	1 cut(s)	415
PkrI	GCNGC	9 cut(s)	7, 12, 256, 289, 616, 651, 1014, 1357, 1411
Ple19I	CGATCG	1 cut(s)	824
PleI	GAGTC	4 cut(s)	136, 1009, 2135, 2153
PpsI	GAGTC	4 cut(s)	136, 1009, 2135, 2153
PscI	ACATGT	1 cut(s)	1510
PsiI	TTATAA	1 cut(s)	1191
Psp6I	CCWGG	3 cut(s)	710, 2106, 2120
PspEI	GGTNACC	1 cut(s)	1969
PspFI	CCCAGC	2 cut(s)	953, 1858
PspGI	CCWGG	3 cut(s)	710, 2106, 2120
PspN4I	GGNNCC	9 cut(s)	242, 414, 450, 451, 918, 930, 1162, 1492, 2066
PspOMI	GGGCCC	1 cut(s)	449
PspPI	GGNCC	5 cut(s)	241, 449, 450, 1175, 2118
PspXI	VCTCGAGB	1 cut(s)	2263
PsuI	RGATCY	1 cut(s)	321
PvuI	CGATCG	1 cut(s)	824
PvuII	CAGCTG	3 cut(s)	1358, 1412, 1820
RruI	TCGCGA	1 cut(s)	35
RsaI	GTAC	6 cut(s)	414, 918, 1449, 1608, 1749, 2066
RsaNI	GTAC	6 cut(s)	413, 917, 1448, 1607, 1748, 2065
RseI	CAYNNNNRTG	3 cut(s)	520, 1202, 1910
SaqAI	TTAA	3 cut(s)	1221, 1779, 2217
SatI	GCNGC	9 cut(s)	6, 11, 255, 288, 615, 650, 1013, 1356, 1410
Sau96I	GGNCC	5 cut(s)	241, 449, 450, 1175, 2118
SchI	GAGTC	4 cut(s)	136, 1010, 2135, 2153
ScrFI	CCNGG	4 cut(s)	239, 712, 2108, 2122
SduI	GDGCHC	3 cut(s)	345, 453, 2019
SfaNI	GCATC	3 cut(s)	646, 1201, 2096
Sfr274I	CTCGAG	1 cut(s)	2263
SgrAI	CRCCGGYG	1 cut(s)	250
SinI	GGWCC	1 cut(s)	241
SlaI	CTCGAG	1 cut(s)	2263
SmiMI	CAYNNNNRTG	3 cut(s)	520, 1202, 1910
SmlI	CTYRAG	2 cut(s)	788, 2263
SmoI	CTYRAG	2 cut(s)	788, 2263
SsiI	CCGC	9 cut(s)	6, 11, 254, 285, 288, 650, 1013, 1076, 2068
SspI	AATATT	4 cut(s)	425, 1187, 1543, 1732
SspMI	CTAG	1 cut(s)	2277
StyD4I	CCNGG	4 cut(s)	237, 710, 2106, 2120
StyI	CCWWGG	2 cut(s)	165, 1845
TaaI	ACNGT	5 cut(s)	181, 569, 720, 1835, 2027
TaqI	TCGA	3 cut(s)	17, 221, 2264
TaqII	GACCGA	2 cut(s)	344, 1988
TatI	WGTACW	2 cut(s)	1606, 1747
TauI	GCSGC	6 cut(s)	8, 13, 257, 290, 652, 1015
TfiI	GAWTC	5 cut(s)	218, 574, 1640, 1810, 1893
Tru1I	TTAA	3 cut(s)	1221, 1779, 2217
Tru9I	TTAA	3 cut(s)	1221, 1779, 2217
TscAI	CASTG	4 cut(s)	1045, 1581, 1671, 2017
TseFI	GTSAC	2 cut(s)	1969, 2284
TseI	GCWGC	3 cut(s)	614, 1355, 1409
Tsp45I	GTSAC	2 cut(s)	1969, 2284
TspDTI	ATGAA	8 cut(s)	256, 716, 1132, 1380, 1542, 1698, 1928, 2109
TspGWI	ACGGA	1 cut(s)	418
TspRI	CASTG	4 cut(s)	1045, 1581, 1671, 2017
Van91I	CCANNNNNTGG	2 cut(s)	1487, 2183
VpaK11BI	GGWCC	1 cut(s)	241
XapI	RAATTY	5 cut(s)	262, 1168, 1622, 1675, 2208
XceI	RCATGY	1 cut(s)	1514
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1484
XhoI	CTCGAG	1 cut(s)	2263
XmnI	GAANNNNTTC	1 cut(s)	263
XspI	CTAG	1 cut(s)	2277

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.