Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0012059

Physical Location & Seq

Genomic Coordinates Forward (+)

6291359 .. 6294205

Gene Structure 2847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G003850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGCCGCGCCGCCGTCGAACAAGTCACCAATCGCCACCCGAGCAAGCCCTAATTCCCGAAGCTCCGAAATCGCCAACCCCGTCCGGCGAAGCTTCACCGGAAACCCATTCGCCAAGCCTTCAATCGTCGCTAATTCAGAGACTCCTCCTCCACGGCGGAGCTCCATGGGCAGAGAGACGGTGGTTACTTTTTCGGAGGACAAAGAAAACGGGAAAGATTCGAGTTGGAAACAAATCCGGGTCCGGTCGCCGGCGGCGGCGAAGAATTTCATGTCGCCGACCATCTCCGCCGCCTCAAAGATCAACGCTTCTCCGAGAAAGAAGATCTTGACCGAGAGGAACGAGCCCGTCCGGACTTCTTCTTCTTCTTCTTCCGAGTTCAAAATCAAAAGCGTGTCCTTTGCTCCGGTACCGGTGGAATATTCCGATCACAAGGAGGAGGTGGGGCCCACAACCCCACCTGTGGTGGTGGTTTCTAAGCCTCCGAAACCCTCTGAAGCAATGGTGGGGCCACCTGAACCTGTTTGTGAAAATGCCTCAGAGGAACAACCTGACTGTGTGAATCTTGACCCGAGTTTCAGGATTAGTCCTCCGGCAACAGCGTCGTTTTCGGGTTCGGGTCATCGGGTCATTGCGCCACTGGATGCTGACCCATCTGCTCCTCCTCCTTATGATCCCAAGACCAATTACCTTTCTCCCAGGCCACAGTTTCTTCATTACAGGCCAAACCCAAGAGTTGAGTATTATCTGAGCAAGGATGGTGAGGGCAAGAGGCTTGAGGAAAGCTTTTCGGATACTGAGGAAACCCGGTCGGATTATTCTCTGAAGGAAGTAGAAGATGTTACTTCCCCTGCTGAAGTGGTAAAGGAGGAGGAGGAAGAAGAAGAAGCAAAAGAGGAGGAGGTACCTGTTTTGGAACCAATGCCCACCATCATCAGTCCCAGCACCAAGTCTATGCCAAAGGAGGAGGAGGCTGTTGAAGTAGAAGAGTCCAGCAAGCTGCGCTTCTCGTGGAGATCAAAGTTCACTGCTTTGATAATGGTTTTGGCAGTTGCGCTTTTCGCGGTTTTGGCTGTTGAAGTGAATGTTCAGGTTTGGTCTGCAAGCTCTGTGTCTTTTGTTTCTGAGTTCATTTCCAATATCAGAGGTGCCAAGAATTTGGGCCCATTGCAATATTATAACCTCACCTTGATGGAAGATGCTCGGGTTAACGAGTATTCTGTGTTCGATCAATGTCACAAAGAAATGGAAGAAATGGGTGAGTTTGATGTGTTTGGAAATGTAATGGGAAGTGTGTTTGAGGTTGAAGCTTCGGAAGAAAAGGGTCTGCAAGAGATTGGAGCAGCTGAATATGAAGAACCAATTGATCAGGAGGCTGGTCTGGCAGATATTGGAGCAGCTGAATATGCAGAACCAATTTATCAGGAGGCTGAAGTACCACAGATTGAATGCTTGGAAGAGAACCAGCCAGAGATTGGAGTCAATGATGTGGAGGAACATGTTGAGCAAGGGAATGTACAAGTTGAGAATATTGAAGCCTTAGAAGAAGAAATGAGACTTTCAGTGATCAGAGCAACTGAGAACCTCGTTGAAGAACATACTGATCCAGAATTTGAGGAAAAGGCTGAATCAACCAACATGGAAGAGGTTTCACTGGAAAAGAATTCTTATGAAGATGTGGAAGCGCTTCAGGCTACACAGGCTATAACTGAAGAAAATATTGTTGTTGATCATGTACATTCCGAGCCAGAAAGTATTGCAAGCATTAAGGAGGAGATTGTAAGCTCAGAAGTATTGAATCTCACAGCTGAGAGGGCTGACAGTATGGTTTCCATGGTGAATGTGCTGGGAATTGCTTTCTTGGTTGTCACATTGGTCGGATTCACAGCCATCATCTACATGAAGAAACGAGAGAACTCACCTTCAAATCCTGCAAACTATGCTGTTCAACCATTGGTGACCGAGAAATTGGCTGCAAGTCCCATTGTTCCAATTAGCACTGAGCACACCTACTGTCCTTCTGAAATGAGTAGCTTCCAGACGAGTTCAGGGTACCGCTCAAAAGGACTAAAGGCATCAGATGAAGTAGAAAGCCAGGAGAAGAGTGCCAGGAAGAACAACAGGAGAGACTCCATGGCTTCAATTGACTCCTCAATGGGGTCACCATCTTATGGGAGTTTTACAACATATGAGAGAATTCCAATTAAGAAGGGATATGGAGAAGAAGAGATTGTAACTCCTGTTAGGCGCTCGAGCAGAATTACTAGGAAAGTCACTTCTCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

761

Amino Acids

84.0

Weight (kDa)

4.65

Isoelectric Point (pI)

70.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16630 AT2G16270
fragaria_vesca	FvH4_2g03070 FvH4_6g23772
prunus_persica	Prupe.8G151500_v2.0.a1 Prupe.8G151700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0247921
rosa_laevigata	RLG00000015172
rosa_multiflora	Rmu_co8497843.1_g000001 Rmu_sc0011977.1_g000002 Rmu_sc0017619.1_g000005
rosa_roxburghii	Rroxscaffold_180G00433180 Rroxscaffold_7G00213580
rosa_rugosa	Rorug05G0529500
rosa_samantha	Rh6AG044300 Rh6BG039100 Rh6CG037900 Rh6DG034900
rosa_wichuraiana	Rw6G003850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1179
Acc65I	GGTACC	3 cut(s)	409, 904, 2052
AccB1I	GGYRCC	4 cut(s)	409, 904, 1148, 2052
AccB7I	CCANNNNNTGG	2 cut(s)	1475, 2171
AccBSI	CCGCTC	1 cut(s)	2058
AccII	CGCG	2 cut(s)	8, 1064
AccIII	TCCGGA	1 cut(s)	351
AciI	CCGC	9 cut(s)	6, 11, 157, 254, 257, 288, 291, 1064, 2056
AclWI	GGATC	2 cut(s)	668, 1598
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	265, 1156, 1610, 1663, 2196
AcuI	CTGAAG	6 cut(s)	516, 845, 876, 1452, 1673, 1731
AfaI	GTAC	6 cut(s)	411, 906, 1437, 1518, 1737, 2054
AfeI	AGCGCT	1 cut(s)	1686
AfiI	CCNNNNNNNGG	5 cut(s)	250, 463, 1475, 2157, 2171
AflIII	ACRYGT	1 cut(s)	1498
AgeI	ACCGGT	1 cut(s)	412
AjnI	CCWGG	3 cut(s)	698, 2094, 2108
Alw21I	GWGCWC	2 cut(s)	164, 2007
Alw26I	GTCTC	4 cut(s)	134, 170, 1549, 2121
AlwI	GGATC	2 cut(s)	668, 1598
Ama87I	CYCGRG	4 cut(s)	39, 571, 1203, 2251
Aor13HI	TCCGGA	1 cut(s)	351
Aor51HI	AGCGCT	1 cut(s)	1686
AoxI	GGCC	6 cut(s)	3, 446, 509, 701, 722, 1162
ApaI	GGGCCC	2 cut(s)	450, 1166
ApeKI	GCWGC	4 cut(s)	1000, 1343, 1397, 1973
ApoI	RAATTY	5 cut(s)	265, 1156, 1610, 1663, 2196
AsiGI	ACCGGT	1 cut(s)	412
Asp700I	GAANNNNTTC	2 cut(s)	266, 1686
Asp718I	GGTACC	3 cut(s)	409, 904, 2052
AspLEI	GCGC	6 cut(s)	10, 637, 1005, 1057, 1687, 2250
AspS9I	GGNCC	6 cut(s)	241, 446, 447, 509, 1162, 1163
AsuC2I	CCSGG	2 cut(s)	239, 808
AsuHPI	GGTGA	9 cut(s)	18, 88, 773, 1177, 1271, 1849, 1911, 1969, 2154
AvaI	CYCGRG	4 cut(s)	39, 571, 1203, 2251
AvaII	GGWCC	1 cut(s)	241
BaeGI	GKGCMC	2 cut(s)	450, 1166
BanI	GGYRCC	4 cut(s)	409, 904, 1148, 2052
BanII	GRGCYC	4 cut(s)	164, 348, 450, 1166
BauI	CACGAG	1 cut(s)	1009
Bbv12I	GWGCWC	2 cut(s)	164, 2007
BbvI	GCAGC	4 cut(s)	987, 1355, 1409, 1960
BccI	CCATC	7 cut(s)	290, 661, 752, 938, 1186, 1898, 2173
BceAI	ACGGC	1 cut(s)	170
BcgI	CGANNNNNNTGC	2 cut(s)	585, 619
BciT130I	CCWGG	3 cut(s)	700, 2096, 2110
BciVI	GTATCC	1 cut(s)	787
BclI	TGATCA	3 cut(s)	1366, 1566, 1729
BcnI	CCSGG	2 cut(s)	239, 808
BcoDI	GTCTC	4 cut(s)	134, 170, 1549, 2121
BfaI	CTAG	1 cut(s)	2265
BfoI	RGCGCY	2 cut(s)	1688, 2251
BfuI	GTATCC	1 cut(s)	787
BglII	AGATCT	1 cut(s)	324
BisI	GCNGC	9 cut(s)	6, 11, 255, 258, 291, 1001, 1344, 1398, 1974
BlsI	GCNGC	9 cut(s)	7, 12, 256, 259, 292, 1002, 1345, 1399, 1975
Bme1390I	CCNGG	5 cut(s)	239, 700, 808, 2096, 2110
Bme18I	GGWCC	1 cut(s)	241
BmeT110I	CYCGRG	4 cut(s)	39, 571, 1203, 2251
BmgT120I	GGNCC	6 cut(s)	241, 446, 447, 509, 1162, 1163
BmrFI	CCNGG	5 cut(s)	239, 700, 808, 2096, 2110
BmsI	GCATC	3 cut(s)	634, 1189, 2084
BpuEI	CTTGAG	1 cut(s)	797
BpuMI	CCSGG	2 cut(s)	239, 808
BsaJI	CCNNGG	5 cut(s)	152, 165, 698, 1833, 2133
BsaWI	WCCGGW	5 cut(s)	98, 243, 351, 406, 412
BsaXI	ACNNNNNCTCC	2 cut(s)	133, 163
Bsc4I	CCNNNNNNNGG	5 cut(s)	250, 463, 1475, 2157, 2171
Bse118I	RCCGGY	2 cut(s)	250, 412
Bse1I	ACTGG	2 cut(s)	645, 1659
Bse3DI	GCAATG	3 cut(s)	507, 630, 1166
BseAI	TCCGGA	1 cut(s)	351
BseBI	CCWGG	3 cut(s)	700, 2096, 2110
BseDI	CCNNGG	5 cut(s)	152, 165, 698, 1833, 2133
BseGI	GGATG	2 cut(s)	649, 763
BseLI	CCNNNNNNNGG	5 cut(s)	250, 463, 1475, 2157, 2171
BseMI	GCAATG	3 cut(s)	507, 630, 1166
BseMII	CTCAG	8 cut(s)	552, 740, 789, 1116, 1569, 1800, 1800, 1992
BseNI	ACTGG	2 cut(s)	645, 1659
BseSI	GKGCMC	2 cut(s)	450, 1166
BseXI	GCAGC	4 cut(s)	987, 1355, 1409, 1960
BseYI	CCCAGC	2 cut(s)	941, 1846
Bsh1236I	CGCG	2 cut(s)	8, 1064
Bsh1285I	CGRYCG	2 cut(s)	248, 812
BshFI	GGCC	6 cut(s)	5, 448, 511, 703, 724, 1164
BshNI	GGYRCC	4 cut(s)	409, 904, 1148, 2052
BshTI	ACCGGT	1 cut(s)	412
BsiEI	CGRYCG	2 cut(s)	248, 812
BsiHKAI	GWGCWC	2 cut(s)	164, 2007
BsiHKCI	CYCGRG	4 cut(s)	39, 571, 1203, 2251
BslFI	GGGAC	2 cut(s)	924, 1965
BslI	CCNNNNNNNGG	5 cut(s)	250, 463, 1475, 2157, 2171
BsmAI	GTCTC	4 cut(s)	134, 170, 1549, 2121
BsmBI	CGTCTC	1 cut(s)	170
BsmFI	GGGAC	2 cut(s)	924, 1965
BsmI	GAATGC	1 cut(s)	1454
BsnI	GGCC	6 cut(s)	5, 448, 511, 703, 724, 1164
BsoBI	CYCGRG	4 cut(s)	39, 571, 1203, 2251
Bsp120I	GGGCCC	2 cut(s)	446, 1162
Bsp1286I	GDGCHC	5 cut(s)	164, 348, 450, 1166, 2007
Bsp13I	TCCGGA	1 cut(s)	351
Bsp1407I	TGTACA	2 cut(s)	1516, 1735
Bsp19I	CCATGG	3 cut(s)	165, 1833, 2133
BspACI	CCGC	9 cut(s)	6, 11, 157, 254, 257, 288, 291, 1064, 2056
BspANI	GGCC	6 cut(s)	5, 448, 511, 703, 724, 1164
BspCNI	CTCAG	8 cut(s)	551, 741, 790, 1117, 1570, 1799, 1801, 1993
BspEI	TCCGGA	1 cut(s)	351
BspFNI	CGCG	2 cut(s)	8, 1064
BspPI	GGATC	2 cut(s)	668, 1598
BspT107I	GGYRCC	4 cut(s)	409, 904, 1148, 2052
BsrBI	CCGCTC	1 cut(s)	2058
BsrDI	GCAATG	3 cut(s)	507, 630, 1166
BsrFI	RCCGGY	2 cut(s)	250, 412
BsrGI	TGTACA	2 cut(s)	1516, 1735
BsrI	ACTGG	2 cut(s)	645, 1659
BssAI	RCCGGY	2 cut(s)	250, 412
BssECI	CCNNGG	5 cut(s)	152, 165, 698, 1833, 2133
BssSI	CACGAG	1 cut(s)	1009
BssT1I	CCWWGG	3 cut(s)	165, 1833, 2133
Bst2BI	CACGAG	1 cut(s)	1009
Bst2UI	CCWGG	3 cut(s)	700, 2096, 2110
Bst4CI	ACNGT	5 cut(s)	181, 557, 708, 1823, 2015
Bst6I	CTCTTC	5 cut(s)	981, 1452, 1638, 2096, 2220
BstAPI	GCANNNNNTGC	1 cut(s)	1940
BstAUI	TGTACA	2 cut(s)	1516, 1735
BstC8I	GCNNGC	5 cut(s)	46, 252, 998, 1105, 1762
BstDSI	CCRYGG	4 cut(s)	152, 165, 1833, 2133
BstEII	GGTNACC	2 cut(s)	1957, 2160
BstF5I	GGATG	2 cut(s)	649, 763
BstFNI	CGCG	2 cut(s)	8, 1064
BstH2I	RGCGCY	2 cut(s)	1688, 2251
BstHHI	GCGC	6 cut(s)	10, 637, 1005, 1057, 1687, 2250
BstMAI	GTCTC	4 cut(s)	134, 170, 1549, 2121
BstMCI	CGRYCG	2 cut(s)	248, 812
BstNI	CCWGG	3 cut(s)	700, 2096, 2110
BstNSI	RCATGY	1 cut(s)	1502
BstPI	GGTNACC	2 cut(s)	1957, 2160
BstSCI	CCNGG	5 cut(s)	237, 698, 806, 2094, 2108
BstSLI	GKGCMC	2 cut(s)	450, 1166
BstUI	CGCG	2 cut(s)	8, 1064
BstV1I	GCAGC	4 cut(s)	987, 1355, 1409, 1960
BstX2I	RGATCY	1 cut(s)	324
BstXI	CCANNNNNNTGG	1 cut(s)	1159
BstYI	RGATCY	1 cut(s)	324
BsuI	GTATCC	1 cut(s)	787
BsuRI	GGCC	6 cut(s)	5, 448, 511, 703, 724, 1164
BtgI	CCRYGG	4 cut(s)	152, 165, 1833, 2133
BtsCI	GGATG	2 cut(s)	649, 763
BtsI	GCAGTG	1 cut(s)	1026
BtsIMutI	CAGTG	5 cut(s)	638, 1026, 1569, 1652, 1998
Cac8I	GCNNGC	5 cut(s)	46, 252, 998, 1105, 1762
CfoI	GCGC	6 cut(s)	10, 637, 1005, 1057, 1687, 2250
Cfr10I	RCCGGY	2 cut(s)	250, 412
Cfr13I	GGNCC	6 cut(s)	241, 446, 447, 509, 1162, 1163
CseI	GACGC	1 cut(s)	591
Csp6I	GTAC	6 cut(s)	410, 905, 1436, 1517, 1736, 2053
CspAI	ACCGGT	1 cut(s)	412
CviAII	CATG	8 cut(s)	166, 271, 1499, 1639, 1733, 1834, 1900, 2134
CviQI	GTAC	6 cut(s)	410, 905, 1436, 1517, 1736, 2053
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	5 cut(s)	981, 1452, 1638, 2096, 2220
EarI	CTCTTC	5 cut(s)	981, 1452, 1638, 2096, 2220
EciI	GGCGGA	2 cut(s)	172, 277
Ecl136II	GAGCTC	1 cut(s)	162
Eco130I	CCWWGG	3 cut(s)	165, 1833, 2133
Eco24I	GRGCYC	4 cut(s)	164, 348, 450, 1166
Eco47I	GGWCC	1 cut(s)	241
Eco47III	AGCGCT	1 cut(s)	1686
Eco53kI	GAGCTC	1 cut(s)	162
Eco57I	CTGAAG	6 cut(s)	516, 845, 876, 1452, 1673, 1731
Eco88I	CYCGRG	4 cut(s)	39, 571, 1203, 2251
Eco91I	GGTNACC	2 cut(s)	1957, 2160
EcoICRI	GAGCTC	1 cut(s)	162
EcoO109I	RGGNCCY	1 cut(s)	446
EcoO65I	GGTNACC	2 cut(s)	1957, 2160
EcoRI	GAATTC	2 cut(s)	1663, 2196
EcoRII	CCWGG	3 cut(s)	698, 2094, 2108
EcoT14I	CCWWGG	3 cut(s)	165, 1833, 2133
EcoT38I	GRGCYC	4 cut(s)	164, 348, 450, 1166
ErhI	CCWWGG	3 cut(s)	165, 1833, 2133
Esp3I	CGTCTC	1 cut(s)	170
FaeI	CATG	8 cut(s)	169, 274, 1502, 1642, 1736, 1837, 1903, 2137
FalI	AAGNNNNNCTT	4 cut(s)	311, 343, 989, 1021
FaqI	GGGAC	2 cut(s)	924, 1965
FatI	CATG	8 cut(s)	165, 270, 1498, 1638, 1732, 1833, 1899, 2133
FauNDI	CATATG	1 cut(s)	2188
FbaI	TGATCA	3 cut(s)	1366, 1566, 1729
Fnu4HI	GCNGC	9 cut(s)	6, 11, 255, 258, 291, 1001, 1344, 1398, 1974
FokI	GGATG	2 cut(s)	656, 770
FriOI	GRGCYC	4 cut(s)	164, 348, 450, 1166
Fsp4HI	GCNGC	9 cut(s)	6, 11, 255, 258, 291, 1001, 1344, 1398, 1974
FspBI	CTAG	1 cut(s)	2265
GlaI	GCGC	6 cut(s)	9, 636, 1004, 1056, 1686, 2249
GluI	GCNGC	9 cut(s)	6, 11, 255, 258, 291, 1001, 1344, 1398, 1974
GsaI	CCCAGC	2 cut(s)	945, 1850
HaeII	RGCGCY	2 cut(s)	1688, 2251
HaeIII	GGCC	6 cut(s)	5, 448, 511, 703, 724, 1164
HgaI	GACGC	1 cut(s)	591
HhaI	GCGC	6 cut(s)	10, 637, 1005, 1057, 1687, 2250
Hin1II	CATG	8 cut(s)	169, 274, 1502, 1642, 1736, 1837, 1903, 2137
Hin6I	GCGC	6 cut(s)	8, 635, 1003, 1055, 1685, 2248
HinP1I	GCGC	6 cut(s)	8, 635, 1003, 1055, 1685, 2248
HincII	GTYRAC	1 cut(s)	1210
HindII	GTYRAC	1 cut(s)	1210
HindIII	AAGCTT	3 cut(s)	91, 784, 1308
HpaI	GTTAAC	1 cut(s)	1210
HphI	GGTGA	9 cut(s)	18, 88, 773, 1177, 1271, 1849, 1911, 1969, 2154
Hpy166II	GTNNAC	2 cut(s)	1026, 1210
Hpy188III	TCNNGA	9 cut(s)	57, 328, 352, 566, 580, 1370, 1424, 1607, 2038
Hpy8I	GTNNAC	2 cut(s)	1026, 1210
Hpy99I	CGWCG	3 cut(s)	19, 131, 607
HpyAV	CCTTC	5 cut(s)	129, 820, 1932, 2028, 2203
HpyCH4III	ACNGT	5 cut(s)	181, 557, 708, 1823, 2015
HpyCH4V	TGCA	7 cut(s)	1103, 1171, 1330, 1409, 1760, 1934, 1976
Hsp92II	CATG	8 cut(s)	169, 274, 1502, 1642, 1736, 1837, 1903, 2137
HspAI	GCGC	6 cut(s)	8, 635, 1003, 1055, 1685, 2248
Kpn2I	TCCGGA	1 cut(s)	351
KpnI	GGTACC	3 cut(s)	413, 908, 2056
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Ksp22I	TGATCA	3 cut(s)	1366, 1566, 1729
KspAI	GTTAAC	1 cut(s)	1210
LmnI	GCTCC	7 cut(s)	68, 159, 167, 409, 664, 1340, 1394
Lsp1109I	GCAGC	4 cut(s)	987, 1355, 1409, 1960
LweI	GCATC	3 cut(s)	634, 1189, 2084
MaeI	CTAG	1 cut(s)	2265
MaeIII	GTNAC	9 cut(s)	24, 184, 841, 1235, 1867, 1957, 2160, 2233, 2272
MbiI	CCGCTC	1 cut(s)	2058
MfeI	CAATTG	2 cut(s)	1362, 2142
MflI	RGATCY	1 cut(s)	324
MhlI	GDGCHC	5 cut(s)	164, 348, 450, 1166, 2007
MlyI	GAGTC	5 cut(s)	136, 998, 1488, 2123, 2141
MmeI	TCCRAC	3 cut(s)	206, 792, 1858
MreI	CGCCGGCG	1 cut(s)	250
MroI	TCCGGA	1 cut(s)	351
MroNI	GCCGGC	1 cut(s)	250
MroXI	GAANNNNTTC	2 cut(s)	266, 1686
MseI	TTAA	3 cut(s)	1209, 1767, 2205
MslI	CAYNNNNRTG	2 cut(s)	1190, 1898
MspA1I	CMGCKG	3 cut(s)	1346, 1400, 1808
MspR9I	CCNGG	5 cut(s)	239, 700, 808, 2096, 2110
MunI	CAATTG	2 cut(s)	1362, 2142
Mva1269I	GAATGC	1 cut(s)	1454
MvaI	CCWGG	3 cut(s)	700, 2096, 2110
MvnI	CGCG	2 cut(s)	8, 1064
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	2 cut(s)	239, 808
NcoI	CCATGG	3 cut(s)	165, 1833, 2133
NdeI	CATATG	1 cut(s)	2188
NgoMIV	GCCGGC	1 cut(s)	250
NlaIII	CATG	8 cut(s)	169, 274, 1502, 1642, 1736, 1837, 1903, 2137
NmuCI	GTSAC	6 cut(s)	24, 1235, 1867, 1957, 2160, 2272
NspI	RCATGY	1 cut(s)	1502
PaeR7I	CTCGAG	1 cut(s)	2251
PciI	ACATGT	1 cut(s)	1498
PcsI	WCGNNNNNNNCGW	1 cut(s)	78
PctI	GAATGC	1 cut(s)	1454
PdiI	GCCGGC	1 cut(s)	252
PdmI	GAANNNNTTC	2 cut(s)	266, 1686
PfeI	GAWTC	5 cut(s)	218, 562, 1628, 1798, 1881
PflMI	CCANNNNNTGG	2 cut(s)	1475, 2171
PinAI	ACCGGT	1 cut(s)	412
PkrI	GCNGC	9 cut(s)	7, 12, 256, 259, 292, 1002, 1345, 1399, 1975
PleI	GAGTC	5 cut(s)	136, 997, 1487, 2123, 2141
PpsI	GAGTC	5 cut(s)	136, 997, 1487, 2123, 2141
PscI	ACATGT	1 cut(s)	1498
PsiI	TTATAA	1 cut(s)	1179
Psp124BI	GAGCTC	1 cut(s)	164
Psp6I	CCWGG	3 cut(s)	698, 2094, 2108
PspEI	GGTNACC	2 cut(s)	1957, 2160
PspFI	CCCAGC	2 cut(s)	941, 1846
PspGI	CCWGG	3 cut(s)	698, 2094, 2108
PspOMI	GGGCCC	2 cut(s)	446, 1162
PspPI	GGNCC	6 cut(s)	241, 446, 447, 509, 1162, 1163
PspXI	VCTCGAGB	1 cut(s)	2251
PsrI	GAACNNNNNNTAC	2 cut(s)	1208, 1240
PsuI	RGATCY	1 cut(s)	324
PvuII	CAGCTG	3 cut(s)	1346, 1400, 1808
RsaI	GTAC	6 cut(s)	411, 906, 1437, 1518, 1737, 2054
RsaNI	GTAC	6 cut(s)	410, 905, 1436, 1517, 1736, 2053
RseI	CAYNNNNRTG	2 cut(s)	1190, 1898
SacI	GAGCTC	1 cut(s)	164
SaqAI	TTAA	3 cut(s)	1209, 1767, 2205
SatI	GCNGC	9 cut(s)	6, 11, 255, 258, 291, 1001, 1344, 1398, 1974
Sau96I	GGNCC	6 cut(s)	241, 446, 447, 509, 1162, 1163
SchI	GAGTC	5 cut(s)	136, 998, 1488, 2123, 2141
ScrFI	CCNGG	5 cut(s)	239, 700, 808, 2096, 2110
SduI	GDGCHC	5 cut(s)	164, 348, 450, 1166, 2007
SfaNI	GCATC	3 cut(s)	634, 1189, 2084
Sfr274I	CTCGAG	1 cut(s)	2251
SgrAI	CRCCGGYG	1 cut(s)	250
SinI	GGWCC	1 cut(s)	241
SlaI	CTCGAG	1 cut(s)	2251
SmiMI	CAYNNNNRTG	2 cut(s)	1190, 1898
SmlI	CTYRAG	2 cut(s)	776, 2251
SmoI	CTYRAG	2 cut(s)	776, 2251
SsiI	CCGC	9 cut(s)	6, 11, 157, 254, 257, 288, 291, 1064, 2056
SspI	AATATT	4 cut(s)	422, 1175, 1531, 1720
SspMI	CTAG	1 cut(s)	2265
SstI	GAGCTC	1 cut(s)	164
StyD4I	CCNGG	5 cut(s)	237, 698, 806, 2094, 2108
StyI	CCWWGG	3 cut(s)	165, 1833, 2133
TaaI	ACNGT	5 cut(s)	181, 557, 708, 1823, 2015
TaqI	TCGA	4 cut(s)	17, 221, 1227, 2252
TaqII	GACCGA	2 cut(s)	347, 1976
TatI	WGTACW	2 cut(s)	1516, 1735
TauI	GCSGC	5 cut(s)	8, 13, 257, 260, 293
TfiI	GAWTC	5 cut(s)	218, 562, 1628, 1798, 1881
Tru1I	TTAA	3 cut(s)	1209, 1767, 2205
Tru9I	TTAA	3 cut(s)	1209, 1767, 2205
TscAI	CASTG	5 cut(s)	645, 1033, 1569, 1659, 2005
TseFI	GTSAC	6 cut(s)	24, 1235, 1867, 1957, 2160, 2272
TseI	GCWGC	4 cut(s)	1000, 1343, 1397, 1973
Tsp45I	GTSAC	6 cut(s)	24, 1235, 1867, 1957, 2160, 2272
TspDTI	ATGAA	7 cut(s)	259, 704, 1120, 1368, 1686, 1916, 2097
TspRI	CASTG	5 cut(s)	645, 1033, 1569, 1659, 2005
Van91I	CCANNNNNTGG	2 cut(s)	1475, 2171
VpaK11BI	GGWCC	1 cut(s)	241
XapI	RAATTY	5 cut(s)	265, 1156, 1610, 1663, 2196
XceI	RCATGY	1 cut(s)	1502
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1472
XhoI	CTCGAG	1 cut(s)	2251
XmnI	GAANNNNTTC	2 cut(s)	266, 1686
XspI	CTAG	1 cut(s)	2265

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.