Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0012059

Physical Location & Seq

Genomic Coordinates Forward (+)

3566672 .. 3569638

Gene Structure 2967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG034900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2247 bp

ATGGCCGCGCCGCCGTCGAACAAGTCCCCAATCGCGACCCGAGCGAGCCCTAATTCCCGAAGCTCCGAAATCGCCAACCCCGTCCGGCGAAGCTTCACCGGAAACCCATTCGCCAAGCCTTCAATCGTCGCTAATTCAGAGACTCCTCCTCCACGGCGGAGCTCCATGGGAAGAGAGACGGTGGTTACTTTTTCGGAGGACAAAGAAAACGGGAAAGATTCGAGTTGGAAACAAATCCGGGTCCGGTCGCCGGCGGCGAAGAATTTCATGTCGCCGACCATCTCCGCCGCCTCAAAGATCAACGCTTCTCCGAGAAAGAAGATCTTGGCCGAGAGGAACGAGCCCGTCCGGACTTCTTCTTCTTCTTCTTCTTCCGAGTTCAAAATCAAAAGCGTGTCCTTTGCTCCGGTACCGGTGGAATATCCCGATCACAAGGAGGAGGTGGGCCCCACAACCCCTAAGCCTCCGAAACCCTTAACTGGGGTTGAAGCAATGGTGGGGCCACTTGAATGCCCTGAACCTGTTTGTGAAAATGCCTCAGAGGAACAACCTGACTGTGTGAATCTTGACCCGAGTTTCAAGATTAGTCCTCCGGCTGCGGCGGCGTTTTCGGATTCGGGTCATCGGGTCATTGCGCCGCTGGATGCTGACCCATCTGCTCCTGCTCCTTATGATCCCAAGACCAATTACCTTTCTCCCAGGCCGCAGTTTCTGCATTACAGGCCAAACCCAAGAGTGGAGTATTATCTGAGTAAGGATGGTGAGGGCAAGAGGCTTGAGGAGAGCTTTGTTTCCGAAAGCTTTTCGGATACTGAGGAAACGCGGTCGGAGTATTCTCCGAAGGAGGTAGAAGATGTTACTTCCCCTGCTGAAGTGGTAAAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGTAAAAGAGGAGGAGGTATCTGTTTCGGAACCAATGCCAATCATCAGTCCCAGCACTAAGTCTATGCCAAAGGAGGAGGAGGCTGTTGAAGTGAAAGAGTCCAGCAAGCCGCGCTTCTTGTGGAGATCAAAGTTCACTGCTTTGATAATGGTTTTGGCAGTTGCGCTTTTCGCTGTTTTGGCTGTTGAAGTGAATATTCAGGTTTGGTCTGCAAGCTCTGTGTCTTTTGTTTCTGAGTTCATTTCCAATATCAGAGGTGCCAAGAATTTGGGCCCATTGCAATATTATAACCTCACCTTGATGGAAGATGCTCGGGTTAATGAGTATTCTGTGTTTGATCAATGTAACAAAGAAATGGAAGAAATGGGTGAGTTTGATGTGTTTGGAAATGTAATGGGAAGTGTGTTTGAGGTTGAAGCTTCGGAAGAAAAGGGTCTGCAAGAGATTGGAGCAGCTGAATATGAAGAACCAATTGATCAGGAGGCTGGTCTGGCAGAGATTGGAGCAGCTGAATATGCAGAACCAATTGGTCAGGAGGCTGAAGTACAACACATTGAACGTTTGGAAGAGAACCAGCCAGAGATTGGAGCCGACACTGTGGTGGAACATGTTGAGCAATTGAATGAACAAGTTGAGAATATTGAAGCCTTGGAAGAAGAAATGAGACCTCCACCGATTGGAGCATCTGAGAACCTCGTTGAAGTACATGCTGATCCAGAATTTGAGGAAATGGCTGAATCAACCAACATGGAAGAGGTTTCACTGGAAAAGAATTCTTATGAAGATGGGGAAGTACTTCAGGCTAGACAGGCTATAACTGAAGAAAATATTGTTGTTGATCATGTACATTCCGAGCCAGAAAGTATTGCAAGCATTAAGGAGGAGATTGTAAGCTCAGAAGTATTGAATCTCACAGCTGAGGGGGCTGACAGTATGGTTTCCATGGTGAGTGTGCTGGGAATTGCTTTCTTGGTTCTCACATTGGTCGGATTCACAGCCATCATCTATATGAAGAAACGAGAGAAATCACCTTCAAATCCTGCAAACTATGCTGTTCAACCATTGGTGACCAAGAAATTAGCTGCAAGTCCCATTGTTCCAATTAGCACTGAGCACACCTACTGTCCTTCTGAAATGAGTAGCTTCCAGACGAGTTCAGGGTACCTCTCAAAAGGACTAAAGGCATCAGATGAAGTAGAAAGCCAGGAGAAGAGGGCCAGGAAGAACAACAGGAGAGACTCCATGGCTTCAATTGACTCCTCAATGGGGTCGCCATCTTATGGGAGTTTTACAACATATGAGAGAATTCCAATTAAGAAGGTAACTATCTATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

748

Amino Acids

82.37

Weight (kDa)

4.61

Isoelectric Point (pI)

69.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16630 AT2G16270
fragaria_vesca	FvH4_2g03070 FvH4_6g23772
prunus_persica	Prupe.8G151500_v2.0.a1 Prupe.8G151700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0247921
rosa_laevigata	RLG00000015172
rosa_multiflora	Rmu_co8497843.1_g000001 Rmu_sc0011977.1_g000002 Rmu_sc0017619.1_g000005
rosa_roxburghii	Rroxscaffold_180G00433180 Rroxscaffold_7G00213580
rosa_rugosa	Rorug05G0529500
rosa_samantha	Rh6AG044300 Rh6BG039100 Rh6CG037900 Rh6DG034900
rosa_wichuraiana	Rw6G003850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1197
Acc65I	GGTACC	2 cut(s)	409, 2070
AccB1I	GGYRCC	3 cut(s)	409, 1166, 2070
AccB7I	CCANNNNNTGG	3 cut(s)	1493, 1586, 2189
AccII	CGCG	4 cut(s)	8, 35, 823, 1021
AccIII	TCCGGA	1 cut(s)	348
AclI	AACGTT	1 cut(s)	1468
AclWI	GGATC	2 cut(s)	668, 1616
AcoI	YGGCCR	2 cut(s)	3, 327
AcsI	RAATTY	5 cut(s)	262, 1174, 1628, 1681, 2214
AcuI	CTGAAG	4 cut(s)	891, 1470, 1691, 1749
AfaI	GTAC	6 cut(s)	411, 1455, 1614, 1704, 1755, 2072
AfiI	CCNNNNNNNGG	8 cut(s)	250, 479, 480, 736, 1493, 1586, 2175, 2189
AflIII	ACRYGT	1 cut(s)	1516
AgeI	ACCGGT	1 cut(s)	412
AjnI	CCWGG	3 cut(s)	698, 2112, 2126
AleI	CACNNNNGTG	1 cut(s)	1508
Alw21I	GWGCWC	2 cut(s)	164, 2025
Alw26I	GTCTC	4 cut(s)	134, 170, 1567, 2139
AlwI	GGATC	2 cut(s)	668, 1616
AlwNI	CAGNNNCTG	1 cut(s)	712
Ama87I	CYCGRG	3 cut(s)	39, 571, 1221
Aor13HI	TCCGGA	1 cut(s)	348
AoxI	GGCC	8 cut(s)	3, 327, 445, 500, 701, 722, 1180, 2124
ApaI	GGGCCC	2 cut(s)	449, 1184
ApeKI	GCWGC	4 cut(s)	596, 1361, 1415, 1991
ApoI	RAATTY	5 cut(s)	262, 1174, 1628, 1681, 2214
AsiGI	ACCGGT	1 cut(s)	412
Asp700I	GAANNNNTTC	2 cut(s)	263, 1704
Asp718I	GGTACC	2 cut(s)	409, 2070
AspLEI	GCGC	4 cut(s)	10, 637, 1023, 1075
AspS9I	GGNCC	7 cut(s)	241, 445, 446, 500, 1180, 1181, 2124
AsuC2I	CCSGG	1 cut(s)	239
AsuHPI	GGTGA	7 cut(s)	88, 773, 1195, 1289, 1867, 1929, 1987
AvaI	CYCGRG	3 cut(s)	39, 571, 1221
AvaII	GGWCC	1 cut(s)	241
BaeGI	GKGCMC	2 cut(s)	449, 1184
BanI	GGYRCC	3 cut(s)	409, 1166, 2070
BanII	GRGCYC	5 cut(s)	50, 164, 345, 449, 1184
Bbv12I	GWGCWC	2 cut(s)	164, 2025
BbvCI	CCTCAGC	1 cut(s)	1827
BbvI	GCAGC	4 cut(s)	583, 1373, 1427, 1978
BccI	CCATC	7 cut(s)	287, 661, 752, 1204, 1688, 1916, 2191
BceAI	ACGGC	1 cut(s)	170
BciT130I	CCWGG	3 cut(s)	700, 2114, 2128
BciVI	GTATCC	1 cut(s)	802
BclI	TGATCA	3 cut(s)	1246, 1384, 1747
BcnI	CCSGG	1 cut(s)	239
BcoDI	GTCTC	4 cut(s)	134, 170, 1567, 2139
BfaI	CTAG	1 cut(s)	1713
BfuI	GTATCC	1 cut(s)	802
BglII	AGATCT	1 cut(s)	321
BmcAI	AGTACT	1 cut(s)	1704
Bme1390I	CCNGG	4 cut(s)	239, 700, 2114, 2128
Bme18I	GGWCC	1 cut(s)	241
BmeT110I	CYCGRG	3 cut(s)	39, 571, 1221
BmgT120I	GGNCC	7 cut(s)	241, 445, 446, 500, 1180, 1181, 2124
BmrFI	CCNGG	4 cut(s)	239, 700, 2114, 2128
BmrI	ACTGGG	1 cut(s)	489
BmsI	GCATC	4 cut(s)	634, 1207, 1601, 2102
BmuI	ACTGGG	1 cut(s)	489
Bpu10I	CCTNAGC	2 cut(s)	459, 1827
BpuEI	CTTGAG	1 cut(s)	797
BpuMI	CCSGG	1 cut(s)	239
BsaI	GGTCTC	1 cut(s)	1567
BsaJI	CCNNGG	6 cut(s)	152, 165, 698, 1557, 1851, 2151
BsaWI	WCCGGW	5 cut(s)	98, 243, 348, 406, 412
BsaXI	ACNNNNNCTCC	2 cut(s)	133, 163
Bsc4I	CCNNNNNNNGG	8 cut(s)	250, 479, 480, 736, 1493, 1586, 2175, 2189
Bse118I	RCCGGY	2 cut(s)	250, 412
Bse1I	ACTGG	2 cut(s)	484, 1677
Bse3DI	GCAATG	3 cut(s)	498, 630, 1184
BseAI	TCCGGA	1 cut(s)	348
BseBI	CCWGG	3 cut(s)	700, 2114, 2128
BseDI	CCNNGG	6 cut(s)	152, 165, 698, 1557, 1851, 2151
BseGI	GGATG	2 cut(s)	649, 763
BseLI	CCNNNNNNNGG	8 cut(s)	250, 479, 480, 736, 1493, 1586, 2175, 2189
BseMI	GCAATG	3 cut(s)	498, 630, 1184
BseMII	CTCAG	8 cut(s)	552, 740, 804, 1134, 1587, 1818, 1818, 2010
BseNI	ACTGG	2 cut(s)	484, 1677
BseSI	GKGCMC	2 cut(s)	449, 1184
BseXI	GCAGC	4 cut(s)	583, 1373, 1427, 1978
BseYI	CCCAGC	2 cut(s)	959, 1864
Bsh1236I	CGCG	4 cut(s)	8, 35, 823, 1021
Bsh1285I	CGRYCG	2 cut(s)	248, 827
BshFI	GGCC	8 cut(s)	5, 329, 447, 502, 703, 724, 1182, 2126
BshNI	GGYRCC	3 cut(s)	409, 1166, 2070
BshTI	ACCGGT	1 cut(s)	412
BsiEI	CGRYCG	2 cut(s)	248, 827
BsiHKAI	GWGCWC	2 cut(s)	164, 2025
BsiHKCI	CYCGRG	3 cut(s)	39, 571, 1221
BsiSI	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 407, 413, 593
BslFI	GGGAC	3 cut(s)	10, 942, 1983
BslI	CCNNNNNNNGG	8 cut(s)	250, 479, 480, 736, 1493, 1586, 2175, 2189
BsmAI	GTCTC	4 cut(s)	134, 170, 1567, 2139
BsmBI	CGTCTC	1 cut(s)	170
BsmFI	GGGAC	3 cut(s)	10, 942, 1983
BsmI	GAATGC	1 cut(s)	515
BsnI	GGCC	8 cut(s)	5, 329, 447, 502, 703, 724, 1182, 2126
Bso31I	GGTCTC	1 cut(s)	1567
BsoBI	CYCGRG	3 cut(s)	39, 571, 1221
Bsp120I	GGGCCC	2 cut(s)	445, 1180
Bsp1286I	GDGCHC	6 cut(s)	50, 164, 345, 449, 1184, 2025
Bsp13I	TCCGGA	1 cut(s)	348
Bsp1407I	TGTACA	1 cut(s)	1753
Bsp143I	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
Bsp19I	CCATGG	3 cut(s)	165, 1851, 2151
Bsp68I	TCGCGA	1 cut(s)	35
BspANI	GGCC	8 cut(s)	5, 329, 447, 502, 703, 724, 1182, 2126
BspCNI	CTCAG	8 cut(s)	551, 741, 805, 1135, 1588, 1817, 1819, 2011
BspEI	TCCGGA	1 cut(s)	348
BspFNI	CGCG	4 cut(s)	8, 35, 823, 1021
BspHI	TCATGA	1 cut(s)	2243
BspPI	GGATC	2 cut(s)	668, 1616
BspT107I	GGYRCC	3 cut(s)	409, 1166, 2070
BspTNI	GGTCTC	1 cut(s)	1567
BsrDI	GCAATG	3 cut(s)	498, 630, 1184
BsrFI	RCCGGY	2 cut(s)	250, 412
BsrGI	TGTACA	1 cut(s)	1753
BsrI	ACTGG	2 cut(s)	484, 1677
BssAI	RCCGGY	2 cut(s)	250, 412
BssECI	CCNNGG	6 cut(s)	152, 165, 698, 1557, 1851, 2151
BssMI	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
BssT1I	CCWWGG	4 cut(s)	165, 1557, 1851, 2151
Bst2UI	CCWGG	3 cut(s)	700, 2114, 2128
Bst4CI	ACNGT	5 cut(s)	181, 557, 1507, 1841, 2033
Bst6I	CTCTTC	4 cut(s)	166, 1470, 1656, 2114
BstAPI	GCANNNNNTGC	2 cut(s)	712, 1958
BstAUI	TGTACA	1 cut(s)	1753
BstC8I	GCNNGC	5 cut(s)	46, 252, 1016, 1123, 1780
BstDSI	CCRYGG	4 cut(s)	152, 165, 1851, 2151
BstEII	GGTNACC	1 cut(s)	1975
BstF5I	GGATG	2 cut(s)	649, 763
BstFNI	CGCG	4 cut(s)	8, 35, 823, 1021
BstHHI	GCGC	4 cut(s)	10, 637, 1023, 1075
BstKTI	GATC	9 cut(s)	300, 324, 430, 676, 1037, 1249, 1387, 1624, 1750
BstMAI	GTCTC	4 cut(s)	134, 170, 1567, 2139
BstMBI	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
BstMCI	CGRYCG	2 cut(s)	248, 827
BstNI	CCWGG	3 cut(s)	700, 2114, 2128
BstNSI	RCATGY	2 cut(s)	1520, 1619
BstPI	GGTNACC	1 cut(s)	1975
BstSCI	CCNGG	4 cut(s)	237, 698, 2112, 2126
BstSLI	GKGCMC	2 cut(s)	449, 1184
BstUI	CGCG	4 cut(s)	8, 35, 823, 1021
BstV1I	GCAGC	4 cut(s)	583, 1373, 1427, 1978
BstX2I	RGATCY	1 cut(s)	321
BstXI	CCANNNNNNTGG	1 cut(s)	1177
BstYI	RGATCY	1 cut(s)	321
BsuI	GTATCC	1 cut(s)	802
BsuRI	GGCC	8 cut(s)	5, 329, 447, 502, 703, 724, 1182, 2126
BtgI	CCRYGG	4 cut(s)	152, 165, 1851, 2151
BtsCI	GGATG	2 cut(s)	649, 763
BtsI	GCAGTG	1 cut(s)	1044
BtsIMutI	CAGTG	4 cut(s)	1044, 1503, 1670, 2016
BtuMI	TCGCGA	1 cut(s)	35
Cac8I	GCNNGC	5 cut(s)	46, 252, 1016, 1123, 1780
CaiI	CAGNNNCTG	1 cut(s)	712
CciI	TCATGA	1 cut(s)	2243
CfoI	GCGC	4 cut(s)	10, 637, 1023, 1075
Cfr10I	RCCGGY	2 cut(s)	250, 412
Cfr13I	GGNCC	7 cut(s)	241, 445, 446, 500, 1180, 1181, 2124
Csp6I	GTAC	6 cut(s)	410, 1454, 1613, 1703, 1754, 2071
CspAI	ACCGGT	1 cut(s)	412
CviAII	CATG	9 cut(s)	166, 268, 1517, 1616, 1657, 1751, 1852, 2152, 2244
CviQI	GTAC	6 cut(s)	410, 1454, 1613, 1703, 1754, 2071
DpnI	GATC	9 cut(s)	299, 323, 429, 675, 1036, 1248, 1386, 1623, 1749
DpnII	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
EaeI	YGGCCR	2 cut(s)	3, 327
Eam1104I	CTCTTC	4 cut(s)	166, 1470, 1656, 2114
EarI	CTCTTC	4 cut(s)	166, 1470, 1656, 2114
EciI	GGCGGA	2 cut(s)	172, 274
Ecl136II	GAGCTC	1 cut(s)	162
Eco130I	CCWWGG	4 cut(s)	165, 1557, 1851, 2151
Eco24I	GRGCYC	5 cut(s)	50, 164, 345, 449, 1184
Eco31I	GGTCTC	1 cut(s)	1567
Eco47I	GGWCC	1 cut(s)	241
Eco53kI	GAGCTC	1 cut(s)	162
Eco57I	CTGAAG	4 cut(s)	891, 1470, 1691, 1749
Eco88I	CYCGRG	3 cut(s)	39, 571, 1221
Eco91I	GGTNACC	1 cut(s)	1975
EcoICRI	GAGCTC	1 cut(s)	162
EcoO109I	RGGNCCY	1 cut(s)	446
EcoO65I	GGTNACC	1 cut(s)	1975
EcoRI	GAATTC	2 cut(s)	1681, 2214
EcoRII	CCWGG	3 cut(s)	698, 2112, 2126
EcoT14I	CCWWGG	4 cut(s)	165, 1557, 1851, 2151
EcoT38I	GRGCYC	5 cut(s)	50, 164, 345, 449, 1184
ErhI	CCWWGG	4 cut(s)	165, 1557, 1851, 2151
Esp3I	CGTCTC	1 cut(s)	170
FaeI	CATG	9 cut(s)	169, 271, 1520, 1619, 1660, 1754, 1855, 2155, 2247
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 1007, 1039
FaqI	GGGAC	3 cut(s)	10, 942, 1983
FatI	CATG	9 cut(s)	165, 267, 1516, 1615, 1656, 1750, 1851, 2151, 2243
FauNDI	CATATG	1 cut(s)	2206
FbaI	TGATCA	3 cut(s)	1246, 1384, 1747
FokI	GGATG	2 cut(s)	656, 770
FriOI	GRGCYC	5 cut(s)	50, 164, 345, 449, 1184
FspBI	CTAG	1 cut(s)	1713
GlaI	GCGC	4 cut(s)	9, 636, 1022, 1074
GsaI	CCCAGC	2 cut(s)	963, 1868
HaeIII	GGCC	8 cut(s)	5, 329, 447, 502, 703, 724, 1182, 2126
HapII	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 407, 413, 593
HhaI	GCGC	4 cut(s)	10, 637, 1023, 1075
Hin1II	CATG	9 cut(s)	169, 271, 1520, 1619, 1660, 1754, 1855, 2155, 2247
Hin6I	GCGC	4 cut(s)	8, 635, 1021, 1073
HinP1I	GCGC	4 cut(s)	8, 635, 1021, 1073
HindIII	AAGCTT	3 cut(s)	91, 799, 1326
HpaII	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 407, 413, 593
HphI	GGTGA	7 cut(s)	88, 773, 1195, 1289, 1867, 1929, 1987
Hpy166II	GTNNAC	1 cut(s)	1044
Hpy8I	GTNNAC	1 cut(s)	1044
Hpy99I	CGWCG	2 cut(s)	19, 131
HpyAV	CCTTC	5 cut(s)	129, 835, 1950, 2046, 2221
HpyCH4III	ACNGT	5 cut(s)	181, 557, 1507, 1841, 2033
HpyCH4IV	ACGT	1 cut(s)	1468
HpyCH4V	TGCA	8 cut(s)	715, 1121, 1189, 1348, 1427, 1778, 1952, 1994
HpySE526I	ACGT	1 cut(s)	1468
Hsp92II	CATG	9 cut(s)	169, 271, 1520, 1619, 1660, 1754, 1855, 2155, 2247
HspAI	GCGC	4 cut(s)	8, 635, 1021, 1073
Kpn2I	TCCGGA	1 cut(s)	348
KpnI	GGTACC	2 cut(s)	413, 2074
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Ksp22I	TGATCA	3 cut(s)	1246, 1384, 1747
Kzo9I	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
Lsp1109I	GCAGC	4 cut(s)	583, 1373, 1427, 1978
LweI	GCATC	4 cut(s)	634, 1207, 1601, 2102
MaeI	CTAG	1 cut(s)	1713
MaeII	ACGT	1 cut(s)	1468
MaeIII	GTNAC	5 cut(s)	184, 856, 1253, 1975, 2230
MalI	GATC	9 cut(s)	299, 323, 429, 675, 1036, 1248, 1386, 1623, 1749
MboI	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
MfeI	CAATTG	4 cut(s)	1380, 1434, 1526, 2160
MflI	RGATCY	1 cut(s)	321
MhlI	GDGCHC	6 cut(s)	50, 164, 345, 449, 1184, 2025
MlyI	GAGTC	4 cut(s)	136, 1016, 2141, 2159
MmeI	TCCRAC	3 cut(s)	206, 807, 1876
MreI	CGCCGGCG	1 cut(s)	250
MroI	TCCGGA	1 cut(s)	348
MroNI	GCCGGC	1 cut(s)	250
MroXI	GAANNNNTTC	2 cut(s)	263, 1704
MseI	TTAA	4 cut(s)	476, 1227, 1785, 2223
MslI	CAYNNNNRTG	4 cut(s)	508, 1208, 1508, 1916
MspA1I	CMGCKG	4 cut(s)	640, 1364, 1418, 1826
MspI	CCGG	9 cut(s)	85, 99, 238, 244, 251, 349, 407, 413, 593
MspR9I	CCNGG	4 cut(s)	239, 700, 2114, 2128
MunI	CAATTG	4 cut(s)	1380, 1434, 1526, 2160
Mva1269I	GAATGC	1 cut(s)	515
MvaI	CCWGG	3 cut(s)	700, 2114, 2128
MvnI	CGCG	4 cut(s)	8, 35, 823, 1021
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	1 cut(s)	239
NcoI	CCATGG	3 cut(s)	165, 1851, 2151
NdeI	CATATG	1 cut(s)	2206
NdeII	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
NgoMIV	GCCGGC	1 cut(s)	250
NlaIII	CATG	9 cut(s)	169, 271, 1520, 1619, 1660, 1754, 1855, 2155, 2247
NmeAIII	GCCGAG	1 cut(s)	355
NmuCI	GTSAC	1 cut(s)	1975
NruI	TCGCGA	1 cut(s)	35
NspI	RCATGY	2 cut(s)	1520, 1619
OliI	CACNNNNGTG	1 cut(s)	1508
PagI	TCATGA	1 cut(s)	2243
PciI	ACATGT	1 cut(s)	1516
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 254
PctI	GAATGC	1 cut(s)	515
PdiI	GCCGGC	1 cut(s)	252
PdmI	GAANNNNTTC	2 cut(s)	263, 1704
PfeI	GAWTC	6 cut(s)	218, 562, 614, 1646, 1816, 1899
PflMI	CCANNNNNTGG	3 cut(s)	1493, 1586, 2189
PinAI	ACCGGT	1 cut(s)	412
PleI	GAGTC	4 cut(s)	136, 1015, 2141, 2159
PpsI	GAGTC	4 cut(s)	136, 1015, 2141, 2159
PscI	ACATGT	1 cut(s)	1516
PsiI	TTATAA	1 cut(s)	1197
Psp124BI	GAGCTC	1 cut(s)	164
Psp1406I	AACGTT	1 cut(s)	1468
Psp6I	CCWGG	3 cut(s)	698, 2112, 2126
PspEI	GGTNACC	1 cut(s)	1975
PspFI	CCCAGC	2 cut(s)	959, 1864
PspGI	CCWGG	3 cut(s)	698, 2112, 2126
PspOMI	GGGCCC	2 cut(s)	445, 1180
PspPI	GGNCC	7 cut(s)	241, 445, 446, 500, 1180, 1181, 2124
PstNI	CAGNNNCTG	1 cut(s)	712
PsuI	RGATCY	1 cut(s)	321
PvuII	CAGCTG	3 cut(s)	1364, 1418, 1826
RruI	TCGCGA	1 cut(s)	35
RsaI	GTAC	6 cut(s)	411, 1455, 1614, 1704, 1755, 2072
RsaNI	GTAC	6 cut(s)	410, 1454, 1613, 1703, 1754, 2071
RseI	CAYNNNNRTG	4 cut(s)	508, 1208, 1508, 1916
SacI	GAGCTC	1 cut(s)	164
SaqAI	TTAA	4 cut(s)	476, 1227, 1785, 2223
Sau3AI	GATC	9 cut(s)	297, 321, 427, 673, 1034, 1246, 1384, 1621, 1747
Sau96I	GGNCC	7 cut(s)	241, 445, 446, 500, 1180, 1181, 2124
ScaI	AGTACT	1 cut(s)	1704
SchI	GAGTC	4 cut(s)	136, 1016, 2141, 2159
ScrFI	CCNGG	4 cut(s)	239, 700, 2114, 2128
SduI	GDGCHC	6 cut(s)	50, 164, 345, 449, 1184, 2025
SfaNI	GCATC	4 cut(s)	634, 1207, 1601, 2102
SgrAI	CRCCGGYG	1 cut(s)	250
SinI	GGWCC	1 cut(s)	241
SmiMI	CAYNNNNRTG	4 cut(s)	508, 1208, 1508, 1916
SmlI	CTYRAG	1 cut(s)	776
SmoI	CTYRAG	1 cut(s)	776
SspI	AATATT	4 cut(s)	1105, 1193, 1549, 1738
SspMI	CTAG	1 cut(s)	1713
SstI	GAGCTC	1 cut(s)	164
StyD4I	CCNGG	4 cut(s)	237, 698, 2112, 2126
StyI	CCWWGG	4 cut(s)	165, 1557, 1851, 2151
TaaI	ACNGT	5 cut(s)	181, 557, 1507, 1841, 2033
TaiI	ACGT	1 cut(s)	1471
TaqI	TCGA	2 cut(s)	17, 221
TatI	WGTACW	4 cut(s)	1453, 1612, 1702, 1753
TauI	GCSGC	9 cut(s)	8, 13, 257, 290, 602, 605, 640, 706, 1021
TfiI	GAWTC	6 cut(s)	218, 562, 614, 1646, 1816, 1899
Tru1I	TTAA	4 cut(s)	476, 1227, 1785, 2223
Tru9I	TTAA	4 cut(s)	476, 1227, 1785, 2223
TscAI	CASTG	4 cut(s)	1051, 1510, 1677, 2023
TseFI	GTSAC	1 cut(s)	1975
TseI	GCWGC	4 cut(s)	596, 1361, 1415, 1991
Tsp45I	GTSAC	1 cut(s)	1975
TspDTI	ATGAA	8 cut(s)	256, 1138, 1386, 1548, 1704, 1934, 2115, 2232
TspRI	CASTG	4 cut(s)	1051, 1510, 1677, 2023
Van91I	CCANNNNNTGG	3 cut(s)	1493, 1586, 2189
VpaK11BI	GGWCC	1 cut(s)	241
XapI	RAATTY	5 cut(s)	262, 1174, 1628, 1681, 2214
XceI	RCATGY	2 cut(s)	1520, 1619
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1490
XmnI	GAANNNNTTC	2 cut(s)	263, 1704
XspI	CTAG	1 cut(s)	1713
ZrmI	AGTACT	1 cut(s)	1704

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.