Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0012059

Physical Location & Seq

Genomic Coordinates Reverse (-)

62651923 .. 62654758

Gene Structure 2836 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015172

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGCCGCGCCGCCGTTGAACAAGTCCCCAATCGCGACCCGAGCAAGCCCTAATTCCCGAAGCTCCGAAATCGCCAACCCCGTCCGGCGAAGCTTCACCGGAAACCCATTCGCCAAGCCTTCAATCGTCGCTAATTCAGAGACTCCTCCTTCACGGCTGAGCTCCATGGGCAGAGAGACGGTGGTTACTTTTTCGGAGGACAAAGAAAACGGGAAAGATTCGAGTTGGAAACAAATTCGGGTGCGGTCGCCGGCGGCGAAGAATTTCATGTCGCCGACCATCTCCGCCGCCTCAAAGATCAACGCTTCTCCGAGAAAGAAGATCTTGACTGAGAGGAACGAGCCCGTCCGGACTTCTTCTTCTTCTTCTTGTTCCGAGTTCAAAATCAAAAGCGTGTCCTTTGCTCCGGTACCGGTGGAATATTCCGATCACAAGGAGGAGGTGGGGCCCACAACCCCACCTGTGGTGGTGGTTTCTAAGCCTCCGAAACCCTCTGAAGCAATGGTGGGGCCACCTGAATGGCCTGAACCTGTTTGTGAAAATGCCTCAGAGGAACAACCTGACTGTGTGAATCTTGACTCGAGTTTCAAGATTAGTCCTCCGGCAACGGCGTCGTTTTCGGGTTCGGGTCATCGGGTCATTGCGCCGCTGGATGCTGACCCATCTGCTCCTCCTCCTTATGATCCCAAGACCAATTACCTTTCTCCCAGGCCACAGTTTCTTCATTACAGGCCAAACCCAAGAGTTGAGTATTATTTGAGTAAGGATGGTGAGGGCAAGAGGCTTGAGGAGAGCTTTTCGGATACTGAGGAAACCCGGTCGGATTATTCTCCAAAGGAAGTAGAAGATGTTACTTCCCCTGCTGAAGTAGTAAAGGAGGAGGAGGAAGAAGAAGAAGCAAAAGAGGAGGAGGTACCTGTTTCGGAACCAATGCCCACCATCATCAGTCCCAGCACTAAGTCGATGCCAAAGGAGGAGGAGGCTGTTGAAGTAGAAACGTCCAGCAAGCCGCGCTTCTCATGGAGATCAAAGCTCACTGCTTTGGTAATGGTTTTGGCAGTTGCGCTTTTCGCGGTTTTGGGTGTTGAAGTGAATGTTCAGGTTTGGTCTGCAAGCTCTGTGTCTTTTGTTTCTGAGTTCATTTCCAATATCAGAGGTGCCAAGAATTTGGGCCCATTGCAATATTATAACCTCACCTTGATGGAAGATGCTCGGGTTAATGAGTATCCTGTGTTCGATCAATGTAACAAAGAAATGGAAGAAATGGGTGAGCTTGATGTGCTTGGAAATGTAATGGGAAGTGTGTTTGAGGTTGAAGCTTCGGAAGAAAAGGGTCTGCAAGAGATTGGATCTGCTGAATATGAAGAACCAATTGATCAGGAGGCTGGTCTGGCAGAGATTGGAGCAGCTGAATATGCAGAACCAATTTATCAGGAGGCTGAAGTACCACAGATCGAATGCTTGGAAGAGAACCAGCCAGAGGTTGGAGCCGACGATGTGGAGGAACATGTTGAGCAAGGGAATGAACAAGTTGAGAATATTGAAGCCTTAGAAGAAGAAATGAGACTTTCAGTGATCAGAGCAACTGAGAACCTCGTTGAAGTACATACTGATCCAGAATTTGAGGAAAAGGCTGAATCAACCAACATGGAAGAGGTTTCACTGGAAAAGAATTCTTATGAAGATGTGGAAGCACTTCAGGCTACACAGGCTATAACTGAAGAAAATATTGTTGTTGATCATGTACATTCTGAGCCAGAAAGTATTGCAAGCATTAAGGAGGAGATTGTAAGCTCAGAAGTATTGAATCTCACAGCTGAGGGGGCTGACAGTATGGTTTCCATGGTGAATGTGCTGGGAATTGCTTTCTTGGTTCTCACATTGGTCGGATTCACAGCCATCATCTACATGAAGAAACGAGAGAACTCACCTTCAAATCCTGCAAACTATGCTGTTCAACCATTGGTGACCGAGAAATTAGCTGCAAGTCCCATTGTTCCAATTAGCACTGAGCACACCTACTGTCCTTCTGAAATGAGTAGCTTCCAGACAAGTTCAGGGTACCGCTCAAAAGGACTAAAGGCATCAGATGAAGTAGAAAGCCAGGAGAAGAGGGCCAGGAAGAACAACAGGAGAGACTCCATGGCTTCAATTGACTCCTCAATGGGGTCGCCATCTTATGGGAGTTTTACAACATATGAGAGAATTCCAATTAAGAAGGGATATGGAGAAGAAGAGATTGTAACTCCTGTTAGGCGCTCGAGCAGAATTACTAGGAAAATACTGTCCTTCATCAACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

768

Amino Acids

84.54

Weight (kDa)

4.61

Isoelectric Point (pI)

69.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012059)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16630 AT2G16270
fragaria_vesca	FvH4_2g03070 FvH4_6g23772
prunus_persica	Prupe.8G151500_v2.0.a1 Prupe.8G151700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0247921
rosa_laevigata	RLG00000015172
rosa_multiflora	Rmu_co8497843.1_g000001 Rmu_sc0011977.1_g000002 Rmu_sc0017619.1_g000005
rosa_roxburghii	Rroxscaffold_180G00433180 Rroxscaffold_7G00213580
rosa_rugosa	Rorug05G0529500
rosa_samantha	Rh6AG044300 Rh6BG039100 Rh6CG037900 Rh6DG034900
rosa_wichuraiana	Rw6G003850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1188
Acc65I	GGTACC	3 cut(s)	409, 913, 2061
AccB1I	GGYRCC	4 cut(s)	409, 913, 1157, 2061
AccB7I	CCANNNNNTGG	2 cut(s)	1484, 2180
AccBSI	CCGCTC	1 cut(s)	2067
AccII	CGCG	4 cut(s)	8, 35, 1012, 1073
AccIII	TCCGGA	1 cut(s)	348
AclWI	GGATC	3 cut(s)	677, 1357, 1607
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	6 cut(s)	234, 262, 1165, 1619, 1672, 2205
AcuI	CTGAAG	5 cut(s)	516, 885, 1461, 1682, 1740
AcyI	GRCGYC	1 cut(s)	611
AfaI	GTAC	6 cut(s)	411, 915, 1446, 1605, 1746, 2063
AfiI	CCNNNNNNNGG	5 cut(s)	463, 1480, 1484, 2166, 2180
AflIII	ACRYGT	1 cut(s)	1507
AgeI	ACCGGT	1 cut(s)	412
AjnI	CCWGG	3 cut(s)	707, 2103, 2117
Alw21I	GWGCWC	2 cut(s)	164, 2016
Alw26I	GTCTC	4 cut(s)	134, 170, 1558, 2130
AlwI	GGATC	3 cut(s)	677, 1357, 1607
Ama87I	CYCGRG	4 cut(s)	39, 580, 1212, 2260
Aor13HI	TCCGGA	1 cut(s)	348
AoxI	GGCC	8 cut(s)	3, 446, 509, 521, 710, 731, 1171, 2115
ApaI	GGGCCC	2 cut(s)	450, 1175
ApeKI	GCWGC	2 cut(s)	1406, 1982
ApoI	RAATTY	6 cut(s)	234, 262, 1165, 1619, 1672, 2205
AsiGI	ACCGGT	1 cut(s)	412
Asp700I	GAANNNNTTC	2 cut(s)	263, 1695
Asp718I	GGTACC	3 cut(s)	409, 913, 2061
AspLEI	GCGC	5 cut(s)	10, 646, 1014, 1066, 2259
AspS9I	GGNCC	6 cut(s)	446, 447, 509, 1171, 1172, 2115
AsuC2I	CCSGG	1 cut(s)	817
AsuHPI	GGTGA	7 cut(s)	88, 782, 1186, 1280, 1858, 1920, 1978
AvaI	CYCGRG	4 cut(s)	39, 580, 1212, 2260
BaeGI	GKGCMC	2 cut(s)	450, 1175
BanI	GGYRCC	4 cut(s)	409, 913, 1157, 2061
BanII	GRGCYC	4 cut(s)	164, 345, 450, 1175
Bbv12I	GWGCWC	2 cut(s)	164, 2016
BbvCI	CCTCAGC	1 cut(s)	1818
BbvI	GCAGC	2 cut(s)	1418, 1969
BccI	CCATC	7 cut(s)	287, 670, 761, 947, 1195, 1907, 2182
BceAI	ACGGC	2 cut(s)	170, 624
BcgI	CGANNNNNNTGC	2 cut(s)	594, 628
BciT130I	CCWGG	3 cut(s)	709, 2105, 2119
BciVI	GTATCC	2 cut(s)	796, 1236
BclI	TGATCA	3 cut(s)	1375, 1575, 1738
BcnI	CCSGG	1 cut(s)	817
BcoDI	GTCTC	4 cut(s)	134, 170, 1558, 2130
BfaI	CTAG	1 cut(s)	2274
BfoI	RGCGCY	1 cut(s)	2260
BfuI	GTATCC	2 cut(s)	796, 1236
BglII	AGATCT	1 cut(s)	321
BisI	GCNGC	8 cut(s)	6, 11, 255, 288, 647, 1010, 1407, 1983
BlpI	GCTNAGC	1 cut(s)	158
BlsI	GCNGC	8 cut(s)	7, 12, 256, 289, 648, 1011, 1408, 1984
Bme1390I	CCNGG	4 cut(s)	709, 817, 2105, 2119
BmeT110I	CYCGRG	4 cut(s)	39, 580, 1212, 2260
BmgT120I	GGNCC	6 cut(s)	446, 447, 509, 1171, 1172, 2115
BmrFI	CCNGG	4 cut(s)	709, 817, 2105, 2119
BmsI	GCATC	4 cut(s)	643, 954, 1198, 2093
Bpu10I	CCTNAGC	1 cut(s)	1818
Bpu1102I	GCTNAGC	1 cut(s)	158
BpuEI	CTTGAG	1 cut(s)	806
BpuMI	CCSGG	1 cut(s)	817
BsaHI	GRCGYC	1 cut(s)	611
BsaJI	CCNNGG	4 cut(s)	165, 707, 1842, 2142
BsaWI	WCCGGW	4 cut(s)	98, 348, 406, 412
Bsc4I	CCNNNNNNNGG	5 cut(s)	463, 1480, 1484, 2166, 2180
Bse118I	RCCGGY	2 cut(s)	250, 412
Bse1I	ACTGG	1 cut(s)	1668
Bse3DI	GCAATG	3 cut(s)	507, 639, 1175
BseAI	TCCGGA	1 cut(s)	348
BseBI	CCWGG	3 cut(s)	709, 2105, 2119
BseDI	CCNNGG	4 cut(s)	165, 707, 1842, 2142
BseGI	GGATG	2 cut(s)	658, 772
BseLI	CCNNNNNNNGG	5 cut(s)	463, 1480, 1484, 2166, 2180
BseMI	GCAATG	3 cut(s)	507, 639, 1175
BseNI	ACTGG	1 cut(s)	1668
BseSI	GKGCMC	2 cut(s)	450, 1175
BseXI	GCAGC	2 cut(s)	1418, 1969
BseYI	CCCAGC	2 cut(s)	950, 1855
Bsh1236I	CGCG	4 cut(s)	8, 35, 1012, 1073
Bsh1285I	CGRYCG	2 cut(s)	248, 821
BshFI	GGCC	8 cut(s)	5, 448, 511, 523, 712, 733, 1173, 2117
BshNI	GGYRCC	4 cut(s)	409, 913, 1157, 2061
BshTI	ACCGGT	1 cut(s)	412
BsiEI	CGRYCG	2 cut(s)	248, 821
BsiHKAI	GWGCWC	2 cut(s)	164, 2016
BsiHKCI	CYCGRG	4 cut(s)	39, 580, 1212, 2260
BsiSI	CCGG	8 cut(s)	85, 99, 251, 349, 407, 413, 602, 817
BslFI	GGGAC	3 cut(s)	10, 933, 1974
BslI	CCNNNNNNNGG	5 cut(s)	463, 1480, 1484, 2166, 2180
BsmAI	GTCTC	4 cut(s)	134, 170, 1558, 2130
BsmBI	CGTCTC	1 cut(s)	170
BsmFI	GGGAC	3 cut(s)	10, 933, 1974
BsmI	GAATGC	1 cut(s)	1463
BsnI	GGCC	8 cut(s)	5, 448, 511, 523, 712, 733, 1173, 2117
BsoBI	CYCGRG	4 cut(s)	39, 580, 1212, 2260
Bsp120I	GGGCCC	2 cut(s)	446, 1171
Bsp1286I	GDGCHC	5 cut(s)	164, 345, 450, 1175, 2016
Bsp13I	TCCGGA	1 cut(s)	348
Bsp1407I	TGTACA	1 cut(s)	1744
Bsp1720I	GCTNAGC	1 cut(s)	158
Bsp19I	CCATGG	3 cut(s)	165, 1842, 2142
Bsp68I	TCGCGA	1 cut(s)	35
BspANI	GGCC	8 cut(s)	5, 448, 511, 523, 712, 733, 1173, 2117
BspEI	TCCGGA	1 cut(s)	348
BspFNI	CGCG	4 cut(s)	8, 35, 1012, 1073
BspPI	GGATC	3 cut(s)	677, 1357, 1607
BspT107I	GGYRCC	4 cut(s)	409, 913, 1157, 2061
BsrBI	CCGCTC	1 cut(s)	2067
BsrDI	GCAATG	3 cut(s)	507, 639, 1175
BsrFI	RCCGGY	2 cut(s)	250, 412
BsrGI	TGTACA	1 cut(s)	1744
BsrI	ACTGG	1 cut(s)	1668
BssAI	RCCGGY	2 cut(s)	250, 412
BssECI	CCNNGG	4 cut(s)	165, 707, 1842, 2142
BssNI	GRCGYC	1 cut(s)	611
BssT1I	CCWWGG	3 cut(s)	165, 1842, 2142
Bst2UI	CCWGG	3 cut(s)	709, 2105, 2119
Bst4CI	ACNGT	6 cut(s)	181, 566, 717, 1832, 2024, 2286
Bst6I	CTCTTC	4 cut(s)	1461, 1647, 2105, 2229
BstACI	GRCGYC	1 cut(s)	611
BstAPI	GCANNNNNTGC	1 cut(s)	1949
BstAUI	TGTACA	1 cut(s)	1744
BstC8I	GCNNGC	5 cut(s)	46, 252, 1007, 1114, 1771
BstDSI	CCRYGG	3 cut(s)	165, 1842, 2142
BstEII	GGTNACC	1 cut(s)	1966
BstF5I	GGATG	2 cut(s)	658, 772
BstFNI	CGCG	4 cut(s)	8, 35, 1012, 1073
BstH2I	RGCGCY	1 cut(s)	2260
BstHHI	GCGC	5 cut(s)	10, 646, 1014, 1066, 2259
BstMAI	GTCTC	4 cut(s)	134, 170, 1558, 2130
BstMCI	CGRYCG	2 cut(s)	248, 821
BstNI	CCWGG	3 cut(s)	709, 2105, 2119
BstNSI	RCATGY	1 cut(s)	1511
BstPI	GGTNACC	1 cut(s)	1966
BstSCI	CCNGG	4 cut(s)	707, 815, 2103, 2117
BstSLI	GKGCMC	2 cut(s)	450, 1175
BstUI	CGCG	4 cut(s)	8, 35, 1012, 1073
BstV1I	GCAGC	2 cut(s)	1418, 1969
BstX2I	RGATCY	2 cut(s)	321, 1349
BstXI	CCANNNNNNTGG	2 cut(s)	519, 1168
BstYI	RGATCY	2 cut(s)	321, 1349
BsuI	GTATCC	2 cut(s)	796, 1236
BsuRI	GGCC	8 cut(s)	5, 448, 511, 523, 712, 733, 1173, 2117
BtgI	CCRYGG	3 cut(s)	165, 1842, 2142
BtsCI	GGATG	2 cut(s)	658, 772
BtsI	GCAGTG	1 cut(s)	1035
BtsIMutI	CAGTG	4 cut(s)	1035, 1578, 1661, 2007
BtuMI	TCGCGA	1 cut(s)	35
Cac8I	GCNNGC	5 cut(s)	46, 252, 1007, 1114, 1771
CfoI	GCGC	5 cut(s)	10, 646, 1014, 1066, 2259
Cfr10I	RCCGGY	2 cut(s)	250, 412
Cfr13I	GGNCC	6 cut(s)	446, 447, 509, 1171, 1172, 2115
CseI	GACGC	1 cut(s)	600
Csp6I	GTAC	6 cut(s)	410, 914, 1445, 1604, 1745, 2062
CspAI	ACCGGT	1 cut(s)	412
CviAII	CATG	9 cut(s)	166, 268, 1020, 1508, 1648, 1742, 1843, 1909, 2143
CviQI	GTAC	6 cut(s)	410, 914, 1445, 1604, 1745, 2062
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	4 cut(s)	1461, 1647, 2105, 2229
EarI	CTCTTC	4 cut(s)	1461, 1647, 2105, 2229
EciI	GGCGGA	1 cut(s)	274
Ecl136II	GAGCTC	1 cut(s)	162
Eco130I	CCWWGG	3 cut(s)	165, 1842, 2142
Eco24I	GRGCYC	4 cut(s)	164, 345, 450, 1175
Eco53kI	GAGCTC	1 cut(s)	162
Eco57I	CTGAAG	5 cut(s)	516, 885, 1461, 1682, 1740
Eco88I	CYCGRG	4 cut(s)	39, 580, 1212, 2260
Eco91I	GGTNACC	1 cut(s)	1966
EcoICRI	GAGCTC	1 cut(s)	162
EcoO109I	RGGNCCY	1 cut(s)	446
EcoO65I	GGTNACC	1 cut(s)	1966
EcoRI	GAATTC	2 cut(s)	1672, 2205
EcoRII	CCWGG	3 cut(s)	707, 2103, 2117
EcoT14I	CCWWGG	3 cut(s)	165, 1842, 2142
EcoT38I	GRGCYC	4 cut(s)	164, 345, 450, 1175
ErhI	CCWWGG	3 cut(s)	165, 1842, 2142
Esp3I	CGTCTC	1 cut(s)	170
FaeI	CATG	9 cut(s)	169, 271, 1023, 1511, 1651, 1745, 1846, 1912, 2146
FalI	AAGNNNNNCTT	4 cut(s)	308, 340, 998, 1030
FaqI	GGGAC	3 cut(s)	10, 933, 1974
FatI	CATG	9 cut(s)	165, 267, 1019, 1507, 1647, 1741, 1842, 1908, 2142
FauNDI	CATATG	1 cut(s)	2197
FbaI	TGATCA	3 cut(s)	1375, 1575, 1738
Fnu4HI	GCNGC	8 cut(s)	6, 11, 255, 288, 647, 1010, 1407, 1983
FokI	GGATG	2 cut(s)	665, 779
FriOI	GRGCYC	4 cut(s)	164, 345, 450, 1175
Fsp4HI	GCNGC	8 cut(s)	6, 11, 255, 288, 647, 1010, 1407, 1983
FspBI	CTAG	1 cut(s)	2274
GlaI	GCGC	5 cut(s)	9, 645, 1013, 1065, 2258
GluI	GCNGC	8 cut(s)	6, 11, 255, 288, 647, 1010, 1407, 1983
GsaI	CCCAGC	2 cut(s)	954, 1859
HaeII	RGCGCY	1 cut(s)	2260
HaeIII	GGCC	8 cut(s)	5, 448, 511, 523, 712, 733, 1173, 2117
HapII	CCGG	8 cut(s)	85, 99, 251, 349, 407, 413, 602, 817
HgaI	GACGC	1 cut(s)	600
HhaI	GCGC	5 cut(s)	10, 646, 1014, 1066, 2259
Hin1I	GRCGYC	1 cut(s)	611
Hin1II	CATG	9 cut(s)	169, 271, 1023, 1511, 1651, 1745, 1846, 1912, 2146
Hin6I	GCGC	5 cut(s)	8, 644, 1012, 1064, 2257
HinP1I	GCGC	5 cut(s)	8, 644, 1012, 1064, 2257
HindIII	AAGCTT	2 cut(s)	91, 1317
HinfI	GANTC	9 cut(s)	142, 218, 571, 578, 1637, 1807, 1890, 2138, 2156
HpaII	CCGG	8 cut(s)	85, 99, 251, 349, 407, 413, 602, 817
HphI	GGTGA	7 cut(s)	88, 782, 1186, 1280, 1858, 1920, 1978
Hpy99I	CGWCG	3 cut(s)	131, 616, 1496
HpyAV	CCTTC	6 cut(s)	129, 159, 1941, 2037, 2212, 2299
HpyCH4III	ACNGT	6 cut(s)	181, 566, 717, 1832, 2024, 2286
HpyCH4IV	ACGT	1 cut(s)	998
HpyCH4V	TGCA	7 cut(s)	1112, 1180, 1339, 1418, 1769, 1943, 1985
HpySE526I	ACGT	1 cut(s)	998
Hsp92I	GRCGYC	1 cut(s)	611
Hsp92II	CATG	9 cut(s)	169, 271, 1023, 1511, 1651, 1745, 1846, 1912, 2146
HspAI	GCGC	5 cut(s)	8, 644, 1012, 1064, 2257
Kpn2I	TCCGGA	1 cut(s)	348
KpnI	GGTACC	3 cut(s)	413, 917, 2065
KroI	GCCGGC	1 cut(s)	250
KroNI	GCCGGC	1 cut(s)	252
Ksp22I	TGATCA	3 cut(s)	1375, 1575, 1738
LmnI	GCTCC	6 cut(s)	68, 167, 409, 673, 1403, 1487
Lsp1109I	GCAGC	2 cut(s)	1418, 1969
LweI	GCATC	4 cut(s)	643, 954, 1198, 2093
MaeI	CTAG	1 cut(s)	2274
MaeII	ACGT	1 cut(s)	998
MaeIII	GTNAC	5 cut(s)	184, 850, 1244, 1966, 2242
MbiI	CCGCTC	1 cut(s)	2067
MfeI	CAATTG	2 cut(s)	1371, 2151
MflI	RGATCY	2 cut(s)	321, 1349
MhlI	GDGCHC	5 cut(s)	164, 345, 450, 1175, 2016
MlyI	GAGTC	4 cut(s)	136, 572, 2132, 2150
MmeI	TCCRAC	4 cut(s)	206, 801, 1465, 1867
MreI	CGCCGGCG	1 cut(s)	250
MroI	TCCGGA	1 cut(s)	348
MroNI	GCCGGC	1 cut(s)	250
MroXI	GAANNNNTTC	2 cut(s)	263, 1695
MseI	TTAA	3 cut(s)	1218, 1776, 2214
MslI	CAYNNNNRTG	3 cut(s)	517, 1199, 1907
MspA1I	CMGCKG	3 cut(s)	649, 1409, 1817
MspI	CCGG	8 cut(s)	85, 99, 251, 349, 407, 413, 602, 817
MspR9I	CCNGG	4 cut(s)	709, 817, 2105, 2119
MunI	CAATTG	2 cut(s)	1371, 2151
Mva1269I	GAATGC	1 cut(s)	1463
MvaI	CCWGG	3 cut(s)	709, 2105, 2119
MvnI	CGCG	4 cut(s)	8, 35, 1012, 1073
NaeI	GCCGGC	1 cut(s)	252
NciI	CCSGG	1 cut(s)	817
NcoI	CCATGG	3 cut(s)	165, 1842, 2142
NdeI	CATATG	1 cut(s)	2197
NgoMIV	GCCGGC	1 cut(s)	250
NlaIII	CATG	9 cut(s)	169, 271, 1023, 1511, 1651, 1745, 1846, 1912, 2146
NmuCI	GTSAC	1 cut(s)	1966
NruI	TCGCGA	1 cut(s)	35
NspI	RCATGY	1 cut(s)	1511
PaeR7I	CTCGAG	2 cut(s)	580, 2260
PciI	ACATGT	1 cut(s)	1507
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 254
PctI	GAATGC	1 cut(s)	1463
PdiI	GCCGGC	1 cut(s)	252
PdmI	GAANNNNTTC	2 cut(s)	263, 1695
PfeI	GAWTC	5 cut(s)	218, 571, 1637, 1807, 1890
PflMI	CCANNNNNTGG	2 cut(s)	1484, 2180
PinAI	ACCGGT	1 cut(s)	412
PkrI	GCNGC	8 cut(s)	7, 12, 256, 289, 648, 1011, 1408, 1984
PleI	GAGTC	4 cut(s)	136, 572, 2132, 2150
PpsI	GAGTC	4 cut(s)	136, 572, 2132, 2150
PscI	ACATGT	1 cut(s)	1507
PsiI	TTATAA	1 cut(s)	1188
Psp124BI	GAGCTC	1 cut(s)	164
Psp6I	CCWGG	3 cut(s)	707, 2103, 2117
PspEI	GGTNACC	1 cut(s)	1966
PspFI	CCCAGC	2 cut(s)	950, 1855
PspGI	CCWGG	3 cut(s)	707, 2103, 2117
PspOMI	GGGCCC	2 cut(s)	446, 1171
PspPI	GGNCC	6 cut(s)	446, 447, 509, 1171, 1172, 2115
PspXI	VCTCGAGB	2 cut(s)	580, 2260
PsrI	GAACNNNNNNTAC	2 cut(s)	1217, 1249
PsuI	RGATCY	2 cut(s)	321, 1349
PvuII	CAGCTG	2 cut(s)	1409, 1817
RruI	TCGCGA	1 cut(s)	35
RsaI	GTAC	6 cut(s)	411, 915, 1446, 1605, 1746, 2063
RsaNI	GTAC	6 cut(s)	410, 914, 1445, 1604, 1745, 2062
RseI	CAYNNNNRTG	3 cut(s)	517, 1199, 1907
SacI	GAGCTC	1 cut(s)	164
SaqAI	TTAA	3 cut(s)	1218, 1776, 2214
SatI	GCNGC	8 cut(s)	6, 11, 255, 288, 647, 1010, 1407, 1983
Sau96I	GGNCC	6 cut(s)	446, 447, 509, 1171, 1172, 2115
SchI	GAGTC	4 cut(s)	136, 572, 2132, 2150
ScrFI	CCNGG	4 cut(s)	709, 817, 2105, 2119
SduI	GDGCHC	5 cut(s)	164, 345, 450, 1175, 2016
SfaNI	GCATC	4 cut(s)	643, 954, 1198, 2093
Sfr274I	CTCGAG	2 cut(s)	580, 2260
SgrAI	CRCCGGYG	1 cut(s)	250
SlaI	CTCGAG	2 cut(s)	580, 2260
SmiMI	CAYNNNNRTG	3 cut(s)	517, 1199, 1907
SmlI	CTYRAG	3 cut(s)	580, 785, 2260
SmoI	CTYRAG	3 cut(s)	580, 785, 2260
SspI	AATATT	4 cut(s)	422, 1184, 1540, 1729
SspMI	CTAG	1 cut(s)	2274
SstI	GAGCTC	1 cut(s)	164
StyD4I	CCNGG	4 cut(s)	707, 815, 2103, 2117
StyI	CCWWGG	3 cut(s)	165, 1842, 2142
TaaI	ACNGT	6 cut(s)	181, 566, 717, 1832, 2024, 2286
TaiI	ACGT	1 cut(s)	1001
TaqI	TCGA	6 cut(s)	221, 581, 962, 1236, 1455, 2261
TaqII	GACCGA	1 cut(s)	1985
TatI	WGTACW	2 cut(s)	1603, 1744
TauI	GCSGC	6 cut(s)	8, 13, 257, 290, 649, 1012
TfiI	GAWTC	5 cut(s)	218, 571, 1637, 1807, 1890
Tru1I	TTAA	3 cut(s)	1218, 1776, 2214
Tru9I	TTAA	3 cut(s)	1218, 1776, 2214
TscAI	CASTG	4 cut(s)	1042, 1578, 1668, 2014
TseFI	GTSAC	1 cut(s)	1966
TseI	GCWGC	2 cut(s)	1406, 1982
Tsp45I	GTSAC	1 cut(s)	1966
TspDTI	ATGAA	9 cut(s)	256, 713, 1129, 1377, 1539, 1695, 1925, 2106, 2281
TspRI	CASTG	4 cut(s)	1042, 1578, 1668, 2014
Van91I	CCANNNNNTGG	2 cut(s)	1484, 2180
XapI	RAATTY	6 cut(s)	234, 262, 1165, 1619, 1672, 2205
XceI	RCATGY	1 cut(s)	1511
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1481
XhoI	CTCGAG	2 cut(s)	580, 2260
XmnI	GAANNNNTTC	2 cut(s)	263, 1695
XspI	CTAG	1 cut(s)	2274

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.