AAA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16800 AT1G16800 AT1G16800 |
| fragaria_vesca | FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 |
| malus_domestica | MD17G1161500.v1.1 |
| prunus_persica | Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 |
| pyrus_communis | pycom17g15460 |
| rosa_chinensis | RchiOBHm_Chr2g0149261 |
| rosa_laevigata | RLG00000020388 |
| rosa_multiflora | Rmu_co8056652.1_g000001 Rmu_co8113988.1_g000001 Rmu_sc0001615.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00098260 |
| rosa_rugosa | Rorug02G0410000 |
| rosa_samantha | Rh2AG470900 Rh2BG483100 Rh2CG456800 Rh2DG492100 |
| rosa_wichuraiana | Rw2G038300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 5312 |
| Acc16I | TGCGCA | 1 cut(s) | 309 |
| Acc36I | ACCTGC | 2 cut(s) | 1276, 1813 |
| Acc65I | GGTACC | 3 cut(s) | 1636, 5007, 5274 |
| AccB1I | GGYRCC | 3 cut(s) | 1636, 5007, 5274 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3929 |
| AccBSI | CCGCTC | 1 cut(s) | 828 |
| AccII | CGCG | 4 cut(s) | 791, 3684, 3940, 5350 |
| AccIII | TCCGGA | 1 cut(s) | 1799 |
| AclI | AACGTT | 2 cut(s) | 1655, 4950 |
| AcoI | YGGCCR | 3 cut(s) | 1126, 1911, 5182 |
| AcyI | GRCGYC | 2 cut(s) | 103, 4491 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 1081, 1646, 1944, 2083, 3075, 3929, 5602 |
| AflII | CTTAAG | 2 cut(s) | 2270, 3736 |
| AflIII | ACRYGT | 7 cut(s) | 1203, 1720, 1810, 2123, 2374, 5109, 5670 |
| AgeI | ACCGGT | 1 cut(s) | 39 |
| AhlI | ACTAGT | 2 cut(s) | 3992, 5899 |
| AleI | CACNNNNGTG | 1 cut(s) | 942 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 454, 486 |
| Alw21I | GWGCWC | 8 cut(s) | 33, 368, 1201, 1838, 3052, 4177, 4944, 5611 |
| Alw44I | GTGCAC | 1 cut(s) | 3048 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 1493, 1861, 3929, 4846, 4937 |
| Aor13HI | TCCGGA | 1 cut(s) | 1799 |
| ApaI | GGGCCC | 2 cut(s) | 1214, 3015 |
| ApaLI | GTGCAC | 1 cut(s) | 3048 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 3018, 3050, 3547, 3579 |
| AsiGI | ACCGGT | 1 cut(s) | 39 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3443, 4250 |
| Asp718I | GGTACC | 3 cut(s) | 1636, 5007, 5274 |
| AspLEI | GCGC | 6 cut(s) | 117, 310, 732, 3237, 3942, 4413 |
| AsuC2I | CCSGG | 2 cut(s) | 630, 2015 |
| AsuII | TTCGAA | 1 cut(s) | 6020 |
| AsuNHI | GCTAGC | 1 cut(s) | 2041 |
| AvaII | GGWCC | 9 cut(s) | 206, 377, 1084, 1629, 1825, 3429, 3555, 3917, 5153 |
| AxyI | CCTNAGG | 1 cut(s) | 6309 |
| BaeGI | GKGCMC | 4 cut(s) | 192, 1214, 3015, 3052 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 1620, 1653, 3563, 3596, 4314, 4347 |
| BalI | TGGCCA | 3 cut(s) | 1128, 1913, 5184 |
| BanI | GGYRCC | 3 cut(s) | 1636, 5007, 5274 |
| BanII | GRGCYC | 5 cut(s) | 33, 1214, 1838, 3015, 5374 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 2018, 2050, 2641, 2673, 5628, 5660 |
| BauI | CACGAG | 3 cut(s) | 596, 2862, 5135 |
| BbsI | GAAGAC | 1 cut(s) | 66 |
| Bbv12I | GWGCWC | 8 cut(s) | 33, 368, 1201, 1838, 3052, 4177, 4944, 5611 |
| BceAI | ACGGC | 4 cut(s) | 2163, 2999, 3617, 5321 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 412, 446, 3635, 3669, 6000, 6034 |
| BciVI | GTATCC | 1 cut(s) | 1154 |
| BclI | TGATCA | 2 cut(s) | 4333, 4435 |
| BcnI | CCSGG | 2 cut(s) | 630, 2015 |
| BcuI | ACTAGT | 2 cut(s) | 3992, 5899 |
| BfmI | CTRYAG | 2 cut(s) | 3809, 4188 |
| BfoI | RGCGCY | 1 cut(s) | 733 |
| BfrI | CTTAAG | 2 cut(s) | 2270, 3736 |
| BfuAI | ACCTGC | 2 cut(s) | 1276, 1813 |
| BfuI | GTATCC | 1 cut(s) | 1154 |
| BglII | AGATCT | 3 cut(s) | 2619, 3784, 4612 |
| BlpI | GCTNAGC | 1 cut(s) | 4458 |
| BmcAI | AGTACT | 2 cut(s) | 2036, 2641 |
| Bme18I | GGWCC | 9 cut(s) | 206, 377, 1084, 1629, 1825, 3429, 3555, 3917, 5153 |
| BmrI | ACTGGG | 3 cut(s) | 715, 1082, 5611 |
| BmtI | GCTAGC | 1 cut(s) | 2045 |
| BmuI | ACTGGG | 3 cut(s) | 715, 1082, 5611 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1614, 6268 |
| BpiI | GAAGAC | 1 cut(s) | 66 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 5535, 5567 |
| BpmI | CTGGAG | 6 cut(s) | 719, 788, 2692, 3356, 3906, 4868 |
| Bpu10I | CCTNAGC | 3 cut(s) | 3249, 4839, 5730 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 4458 |
| Bpu14I | TTCGAA | 1 cut(s) | 6020 |
| BpuEI | CTTGAG | 9 cut(s) | 248, 321, 731, 881, 1037, 2023, 2159, 4617, 5358 |
| BpuMI | CCSGG | 2 cut(s) | 630, 2015 |
| Bsa29I | ATCGAT | 1 cut(s) | 3371 |
| BsaAI | YACGTR | 1 cut(s) | 1334 |
| BsaBI | GATNNNNATC | 4 cut(s) | 84, 474, 480, 3178 |
| BsaHI | GRCGYC | 2 cut(s) | 103, 4491 |
| BsaI | GGTCTC | 4 cut(s) | 799, 4734, 4908, 5586 |
| BsaWI | WCCGGW | 2 cut(s) | 39, 1799 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 5802, 5832 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 1081, 1646, 1944, 2083, 3075, 3929, 5602 |
| Bse118I | RCCGGY | 2 cut(s) | 39, 6287 |
| Bse21I | CCTNAGG | 1 cut(s) | 6309 |
| Bse3DI | GCAATG | 6 cut(s) | 317, 740, 1256, 3502, 5227, 6148 |
| Bse8I | GATNNNNATC | 4 cut(s) | 84, 474, 480, 3178 |
| BseAI | TCCGGA | 1 cut(s) | 1799 |
| BseCI | ATCGAT | 1 cut(s) | 3371 |
| BseJI | GATNNNNATC | 4 cut(s) | 84, 474, 480, 3178 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 1081, 1646, 1944, 2083, 3075, 3929, 5602 |
| BseMI | GCAATG | 6 cut(s) | 317, 740, 1256, 3502, 5227, 6148 |
| BseRI | GAGGAG | 8 cut(s) | 61, 83, 1919, 2614, 3302, 3353, 4364, 4752 |
| BseSI | GKGCMC | 4 cut(s) | 192, 1214, 3015, 3052 |
| BseYI | CCCAGC | 2 cut(s) | 5003, 5028 |
| BsgI | GTGCAG | 2 cut(s) | 1847, 4410 |
| Bsh1236I | CGCG | 4 cut(s) | 791, 3684, 3940, 5350 |
| Bsh1285I | CGRYCG | 2 cut(s) | 3073, 5660 |
| BshNI | GGYRCC | 3 cut(s) | 1636, 5007, 5274 |
| BshTI | ACCGGT | 1 cut(s) | 39 |
| BshVI | ATCGAT | 1 cut(s) | 3371 |
| BsiEI | CGRYCG | 2 cut(s) | 3073, 5660 |
| BsiHKAI | GWGCWC | 8 cut(s) | 33, 368, 1201, 1838, 3052, 4177, 4944, 5611 |
| BsiSI | CCGG | 6 cut(s) | 40, 629, 1800, 2015, 4505, 6288 |
| BslFI | GGGAC | 6 cut(s) | 219, 792, 997, 1070, 3940, 6256 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 1081, 1646, 1944, 2083, 3075, 3929, 5602 |
| BsmBI | CGTCTC | 4 cut(s) | 798, 2933, 5935, 6231 |
| BsmFI | GGGAC | 6 cut(s) | 219, 792, 997, 1070, 3940, 6256 |
| BsmI | GAATGC | 5 cut(s) | 140, 3595, 3657, 4362, 5746 |
| Bso31I | GGTCTC | 4 cut(s) | 799, 4734, 4908, 5586 |
| Bsp119I | TTCGAA | 1 cut(s) | 6020 |
| Bsp120I | GGGCCC | 2 cut(s) | 1210, 3011 |
| Bsp13I | TCCGGA | 1 cut(s) | 1799 |
| Bsp1407I | TGTACA | 1 cut(s) | 4746 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 4458 |
| Bsp19I | CCATGG | 1 cut(s) | 696 |
| Bsp68I | TCGCGA | 1 cut(s) | 3684 |
| BspDI | ATCGAT | 1 cut(s) | 3371 |
| BspEI | TCCGGA | 1 cut(s) | 1799 |
| BspFNI | CGCG | 4 cut(s) | 791, 3684, 3940, 5350 |
| BspMAI | CTGCAG | 1 cut(s) | 4192 |
| BspMI | ACCTGC | 2 cut(s) | 1276, 1813 |
| BspOI | GCTAGC | 1 cut(s) | 2045 |
| BspQI | GCTCTTC | 2 cut(s) | 373, 1146 |
| BspT104I | TTCGAA | 1 cut(s) | 6020 |
| BspT107I | GGYRCC | 3 cut(s) | 1636, 5007, 5274 |
| BspTI | CTTAAG | 2 cut(s) | 2270, 3736 |
| BspTNI | GGTCTC | 4 cut(s) | 799, 4734, 4908, 5586 |
| BsrBI | CCGCTC | 1 cut(s) | 828 |
| BsrDI | GCAATG | 6 cut(s) | 317, 740, 1256, 3502, 5227, 6148 |
| BsrFI | RCCGGY | 2 cut(s) | 39, 6287 |
| BsrGI | TGTACA | 1 cut(s) | 4746 |
| BssAI | RCCGGY | 2 cut(s) | 39, 6287 |
| BssNI | GRCGYC | 2 cut(s) | 103, 4491 |
| BssSI | CACGAG | 3 cut(s) | 596, 2862, 5135 |
| BssT1I | CCWWGG | 4 cut(s) | 696, 809, 2439, 3276 |
| Bst2BI | CACGAG | 3 cut(s) | 596, 2862, 5135 |
| BstACI | GRCGYC | 2 cut(s) | 103, 4491 |
| BstAFI | CTTAAG | 2 cut(s) | 2270, 3736 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2051 |
| BstAUI | TGTACA | 1 cut(s) | 4746 |
| BstBAI | YACGTR | 1 cut(s) | 1334 |
| BstBI | TTCGAA | 1 cut(s) | 6020 |
| BstDSI | CCRYGG | 1 cut(s) | 696 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1079, 2081 |
| BstFNI | CGCG | 4 cut(s) | 791, 3684, 3940, 5350 |
| BstH2I | RGCGCY | 1 cut(s) | 733 |
| BstHHI | GCGC | 6 cut(s) | 117, 310, 732, 3237, 3942, 4413 |
| BstMCI | CGRYCG | 2 cut(s) | 3073, 5660 |
| BstNSI | RCATGY | 8 cut(s) | 1207, 1814, 2127, 2378, 3650, 4984, 5113, 5674 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1614, 6268 |
| BstSFI | CTRYAG | 2 cut(s) | 3809, 4188 |
| BstSLI | GKGCMC | 4 cut(s) | 192, 1214, 3015, 3052 |
| BstSNI | TACGTA | 1 cut(s) | 1334 |
| BstUI | CGCG | 4 cut(s) | 791, 3684, 3940, 5350 |
| BstV2I | GAAGAC | 1 cut(s) | 66 |
| BstX2I | RGATCY | 8 cut(s) | 1490, 1857, 2506, 2619, 2725, 2803, 3784, 4612 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2914, 5150 |
| BstYI | RGATCY | 8 cut(s) | 1490, 1857, 2506, 2619, 2725, 2803, 3784, 4612 |
| Bsu15I | ATCGAT | 1 cut(s) | 3371 |
| Bsu36I | CCTNAGG | 1 cut(s) | 6309 |
| BsuI | GTATCC | 1 cut(s) | 1154 |
| BsuTUI | ATCGAT | 1 cut(s) | 3371 |
| BtgI | CCRYGG | 1 cut(s) | 696 |
| BtsI | GCAGTG | 1 cut(s) | 854 |
| BtuMI | TCGCGA | 1 cut(s) | 3684 |
| BveI | ACCTGC | 2 cut(s) | 1276, 1813 |
| CaiI | CAGNNNCTG | 5 cut(s) | 1493, 1861, 3929, 4846, 4937 |
| CfoI | GCGC | 6 cut(s) | 117, 310, 732, 3237, 3942, 4413 |
| Cfr10I | RCCGGY | 2 cut(s) | 39, 6287 |
| ClaI | ATCGAT | 1 cut(s) | 3371 |
| CseI | GACGC | 8 cut(s) | 92, 780, 2208, 2351, 3946, 4499, 5315, 5529 |
| CsiI | ACCWGGT | 1 cut(s) | 4015 |
| CspAI | ACCGGT | 1 cut(s) | 39 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2943, 2978 |
| DraI | TTTAAA | 1 cut(s) | 3295 |
| EaeI | YGGCCR | 3 cut(s) | 1126, 1911, 5182 |
| EciI | GGCGGA | 1 cut(s) | 3967 |
| Ecl136II | GAGCTC | 2 cut(s) | 31, 1836 |
| Eco105I | TACGTA | 1 cut(s) | 1334 |
| Eco130I | CCWWGG | 4 cut(s) | 696, 809, 2439, 3276 |
| Eco24I | GRGCYC | 5 cut(s) | 33, 1214, 1838, 3015, 5374 |
| Eco31I | GGTCTC | 4 cut(s) | 799, 4734, 4908, 5586 |
| Eco32I | GATATC | 3 cut(s) | 156, 3327, 6177 |
| Eco47I | GGWCC | 9 cut(s) | 206, 377, 1084, 1629, 1825, 3429, 3555, 3917, 5153 |
| Eco53kI | GAGCTC | 2 cut(s) | 31, 1836 |
| Eco81I | CCTNAGG | 1 cut(s) | 6309 |
| EcoICRI | GAGCTC | 2 cut(s) | 31, 1836 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1079, 2081 |
| EcoO109I | RGGNCCY | 7 cut(s) | 206, 875, 1084, 1210, 3011, 3917, 4843 |
| EcoRI | GAATTC | 1 cut(s) | 762 |
| EcoRV | GATATC | 3 cut(s) | 156, 3327, 6177 |
| EcoT14I | CCWWGG | 4 cut(s) | 696, 809, 2439, 3276 |
| EcoT22I | ATGCAT | 5 cut(s) | 142, 317, 3595, 5046, 5076 |
| EcoT38I | GRGCYC | 5 cut(s) | 33, 1214, 1838, 3015, 5374 |
| ErhI | CCWWGG | 4 cut(s) | 696, 809, 2439, 3276 |
| Esp3I | CGTCTC | 4 cut(s) | 798, 2933, 5935, 6231 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1452, 1484 |
| FaqI | GGGAC | 6 cut(s) | 219, 792, 997, 1070, 3940, 6256 |
| FauNDI | CATATG | 2 cut(s) | 466, 5158 |
| FbaI | TGATCA | 2 cut(s) | 4333, 4435 |
| FriOI | GRGCYC | 5 cut(s) | 33, 1214, 1838, 3015, 5374 |
| FspI | TGCGCA | 1 cut(s) | 309 |
| GlaI | GCGC | 6 cut(s) | 116, 309, 731, 3236, 3941, 4412 |
| GsaI | CCCAGC | 2 cut(s) | 5007, 5032 |
| GsuI | CTGGAG | 6 cut(s) | 719, 788, 2692, 3356, 3906, 4868 |
| HaeII | RGCGCY | 1 cut(s) | 733 |
| HapII | CCGG | 6 cut(s) | 40, 629, 1800, 2015, 4505, 6288 |
| HgaI | GACGC | 8 cut(s) | 92, 780, 2208, 2351, 3946, 4499, 5315, 5529 |
| HhaI | GCGC | 6 cut(s) | 117, 310, 732, 3237, 3942, 4413 |
| Hin1I | GRCGYC | 2 cut(s) | 103, 4491 |
| Hin6I | GCGC | 6 cut(s) | 115, 308, 730, 3235, 3940, 4411 |
| HinP1I | GCGC | 6 cut(s) | 115, 308, 730, 3235, 3940, 4411 |
| HincII | GTYRAC | 7 cut(s) | 2398, 3058, 3385, 3845, 5107, 5431, 6327 |
| HindII | GTYRAC | 7 cut(s) | 2398, 3058, 3385, 3845, 5107, 5431, 6327 |
| HindIII | AAGCTT | 7 cut(s) | 1849, 2663, 3119, 3693, 3891, 5877, 6071 |
| HpaII | CCGG | 6 cut(s) | 40, 629, 1800, 2015, 4505, 6288 |
| Hpy99I | CGWCG | 1 cut(s) | 1382 |
| HpyCH4IV | ACGT | 9 cut(s) | 1333, 1655, 1722, 1923, 2131, 3634, 4859, 4950, 4990 |
| HpySE526I | ACGT | 9 cut(s) | 1333, 1655, 1722, 1923, 2131, 3634, 4859, 4950, 4990 |
| Hsp92I | GRCGYC | 2 cut(s) | 103, 4491 |
| HspAI | GCGC | 6 cut(s) | 115, 308, 730, 3235, 3940, 4411 |
| Kpn2I | TCCGGA | 1 cut(s) | 1799 |
| KpnI | GGTACC | 3 cut(s) | 1640, 5011, 5278 |
| KroI | GCCGGC | 1 cut(s) | 6287 |
| KroNI | GCCGGC | 1 cut(s) | 6289 |
| Ksp22I | TGATCA | 2 cut(s) | 4333, 4435 |
| LguI | GCTCTTC | 2 cut(s) | 373, 1146 |
| LmnI | GCTCC | 6 cut(s) | 2711, 4558, 4849, 5216, 5476, 5946 |
| MabI | ACCWGGT | 1 cut(s) | 4015 |
| MaeII | ACGT | 9 cut(s) | 1333, 1655, 1722, 1923, 2131, 3634, 4859, 4950, 4990 |
| MbiI | CCGCTC | 1 cut(s) | 828 |
| MflI | RGATCY | 8 cut(s) | 1490, 1857, 2506, 2619, 2725, 2803, 3784, 4612 |
| MlsI | TGGCCA | 3 cut(s) | 1128, 1913, 5184 |
| MluNI | TGGCCA | 3 cut(s) | 1128, 1913, 5184 |
| MlyI | GAGTC | 8 cut(s) | 328, 587, 1526, 2195, 3208, 3850, 5929, 6332 |
| MmeI | TCCRAC | 6 cut(s) | 2925, 3190, 3456, 4255, 4891, 5474 |
| Mox20I | TGGCCA | 3 cut(s) | 1128, 1913, 5184 |
| Mph1103I | ATGCAT | 5 cut(s) | 142, 317, 3595, 5046, 5076 |
| MroI | TCCGGA | 1 cut(s) | 1799 |
| MroNI | GCCGGC | 1 cut(s) | 6287 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3443, 4250 |
| MscI | TGGCCA | 3 cut(s) | 1128, 1913, 5184 |
| MslI | CAYNNNNRTG | 4 cut(s) | 483, 835, 942, 5196 |
| Msp20I | TGGCCA | 3 cut(s) | 1128, 1913, 5184 |
| MspA1I | CMGCKG | 2 cut(s) | 3304, 4339 |
| MspCI | CTTAAG | 2 cut(s) | 2270, 3736 |
| MspI | CCGG | 6 cut(s) | 40, 629, 1800, 2015, 4505, 6288 |
| Mva1269I | GAATGC | 5 cut(s) | 140, 3595, 3657, 4362, 5746 |
| MvnI | CGCG | 4 cut(s) | 791, 3684, 3940, 5350 |
| NaeI | GCCGGC | 1 cut(s) | 6289 |
| NciI | CCSGG | 2 cut(s) | 630, 2015 |
| NcoI | CCATGG | 1 cut(s) | 696 |
| NdeI | CATATG | 2 cut(s) | 466, 5158 |
| NgoMIV | GCCGGC | 1 cut(s) | 6287 |
| NheI | GCTAGC | 1 cut(s) | 2041 |
| NmeAIII | GCCGAG | 1 cut(s) | 2835 |
| NmuCI | GTSAC | 6 cut(s) | 418, 1531, 1607, 2262, 2339, 3995 |
| NruI | TCGCGA | 1 cut(s) | 3684 |
| NsbI | TGCGCA | 1 cut(s) | 309 |
| NsiI | ATGCAT | 5 cut(s) | 142, 317, 3595, 5046, 5076 |
| NspI | RCATGY | 8 cut(s) | 1207, 1814, 2127, 2378, 3650, 4984, 5113, 5674 |
| NspV | TTCGAA | 1 cut(s) | 6020 |
| OliI | CACNNNNGTG | 1 cut(s) | 942 |
| PaeI | GCATGC | 1 cut(s) | 3650 |
| PciI | ACATGT | 6 cut(s) | 1203, 1810, 2123, 2374, 5109, 5670 |
| PciSI | GCTCTTC | 2 cut(s) | 373, 1146 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 60 |
| PctI | GAATGC | 5 cut(s) | 140, 3595, 3657, 4362, 5746 |
| PdiI | GCCGGC | 1 cut(s) | 6289 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3443, 4250 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3929 |
| PfoI | TCCNGGA | 1 cut(s) | 3318 |
| PinAI | ACCGGT | 1 cut(s) | 39 |
| Ple19I | CGATCG | 1 cut(s) | 3073 |
| PleI | GAGTC | 8 cut(s) | 328, 586, 1525, 2194, 3207, 3849, 5929, 6331 |
| PpsI | GAGTC | 8 cut(s) | 328, 586, 1525, 2194, 3207, 3849, 5929, 6331 |
| Ppu21I | YACGTR | 1 cut(s) | 1334 |
| PpuMI | RGGWCCY | 3 cut(s) | 206, 1084, 3917 |
| PscI | ACATGT | 6 cut(s) | 1203, 1810, 2123, 2374, 5109, 5670 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1614, 6268 |
| PsiI | TTATAA | 1 cut(s) | 5312 |
| Psp124BI | GAGCTC | 2 cut(s) | 33, 1838 |
| Psp1406I | AACGTT | 2 cut(s) | 1655, 4950 |
| Psp5II | RGGWCCY | 3 cut(s) | 206, 1084, 3917 |
| PspFI | CCCAGC | 2 cut(s) | 5003, 5028 |
| PspOMI | GGGCCC | 2 cut(s) | 1210, 3011 |
| PspPPI | RGGWCCY | 3 cut(s) | 206, 1084, 3917 |
| PstI | CTGCAG | 1 cut(s) | 4192 |
| PstNI | CAGNNNCTG | 5 cut(s) | 1493, 1861, 3929, 4846, 4937 |
| PsuI | RGATCY | 8 cut(s) | 1490, 1857, 2506, 2619, 2725, 2803, 3784, 4612 |
| PvuI | CGATCG | 1 cut(s) | 3073 |
| PvuII | CAGCTG | 1 cut(s) | 3304 |
| RruI | TCGCGA | 1 cut(s) | 3684 |
| RseI | CAYNNNNRTG | 4 cut(s) | 483, 835, 942, 5196 |
| SacI | GAGCTC | 2 cut(s) | 33, 1838 |
| SapI | GCTCTTC | 2 cut(s) | 373, 1146 |
| ScaI | AGTACT | 2 cut(s) | 2036, 2641 |
| SchI | GAGTC | 8 cut(s) | 328, 587, 1526, 2195, 3208, 3850, 5929, 6332 |
| SexAI | ACCWGGT | 1 cut(s) | 4015 |
| SfcI | CTRYAG | 2 cut(s) | 3809, 4188 |
| SfuI | TTCGAA | 1 cut(s) | 6020 |
| SinI | GGWCC | 9 cut(s) | 206, 377, 1084, 1629, 1825, 3429, 3555, 3917, 5153 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 483, 835, 942, 5196 |
| SnaBI | TACGTA | 1 cut(s) | 1334 |
| SpeI | ACTAGT | 2 cut(s) | 3992, 5899 |
| SphI | GCATGC | 1 cut(s) | 3650 |
| SspI | AATATT | 1 cut(s) | 2716 |
| SstI | GAGCTC | 2 cut(s) | 33, 1838 |
| StyI | CCWWGG | 4 cut(s) | 696, 809, 2439, 3276 |
| TaiI | ACGT | 9 cut(s) | 1336, 1658, 1725, 1926, 2134, 3637, 4862, 4953, 4993 |
| TatI | WGTACW | 4 cut(s) | 1150, 2034, 2639, 4746 |
| TauI | GCSGC | 2 cut(s) | 301, 5757 |
| TseFI | GTSAC | 6 cut(s) | 418, 1531, 1607, 2262, 2339, 3995 |
| Tsp45I | GTSAC | 6 cut(s) | 418, 1531, 1607, 2262, 2339, 3995 |
| TspGWI | ACGGA | 5 cut(s) | 149, 2957, 3568, 5203, 5959 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3929 |
| Vha464I | CTTAAG | 2 cut(s) | 2270, 3736 |
| VneI | GTGCAC | 1 cut(s) | 3048 |
| VpaK11BI | GGWCC | 9 cut(s) | 206, 377, 1084, 1629, 1825, 3429, 3555, 3917, 5153 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1079, 2081 |
| XbaI | TCTAGA | 2 cut(s) | 820, 4420 |
| XceI | RCATGY | 8 cut(s) | 1207, 1814, 2127, 2378, 3650, 4984, 5113, 5674 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1591 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3443, 4250 |
| ZrmI | AGTACT | 2 cut(s) | 2036, 2641 |
| Zsp2I | ATGCAT | 5 cut(s) | 142, 317, 3595, 5046, 5076 |