AAA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16800 AT1G16800 AT1G16800 |
| fragaria_vesca | FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 |
| malus_domestica | MD17G1161500.v1.1 |
| prunus_persica | Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 |
| pyrus_communis | pycom17g15460 |
| rosa_chinensis | RchiOBHm_Chr2g0149261 |
| rosa_laevigata | RLG00000020388 |
| rosa_multiflora | Rmu_co8056652.1_g000001 Rmu_co8113988.1_g000001 Rmu_sc0001615.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00098260 |
| rosa_rugosa | Rorug02G0410000 |
| rosa_samantha | Rh2AG470900 Rh2BG483100 Rh2CG456800 Rh2DG492100 |
| rosa_wichuraiana | Rw2G038300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2028, 5645 |
| AarI | CACCTGC | 1 cut(s) | 6398 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2855 |
| Acc36I | ACCTGC | 3 cut(s) | 883, 4849, 6398 |
| Acc65I | GGTACC | 2 cut(s) | 3923, 5268 |
| AccB1I | GGYRCC | 2 cut(s) | 3923, 5268 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1122 |
| AccI | GTMKAC | 5 cut(s) | 201, 509, 1140, 1851, 4431 |
| AccII | CGCG | 1 cut(s) | 1195 |
| AciI | CCGC | 7 cut(s) | 307, 918, 1617, 1975, 2429, 4669, 5173 |
| AclI | AACGTT | 2 cut(s) | 4336, 4978 |
| AclWI | GGATC | 9 cut(s) | 1499, 1805, 2405, 2418, 2945, 4608, 4898, 5371, 5731 |
| AcoI | YGGCCR | 4 cut(s) | 3070, 3948, 4993, 5926 |
| AcuI | CTGAAG | 7 cut(s) | 694, 1050, 1593, 2517, 3830, 3839, 4844 |
| AcyI | GRCGYC | 1 cut(s) | 2983 |
| AdeI | CACNNNGTG | 1 cut(s) | 4409 |
| AflII | CTTAAG | 2 cut(s) | 4468, 4490 |
| AflIII | ACRYGT | 3 cut(s) | 2177, 4508, 5974 |
| AgeI | ACCGGT | 1 cut(s) | 3926 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 4492, 5098, 5133 |
| AjnI | CCWGG | 8 cut(s) | 520, 1256, 2036, 3804, 3919, 4050, 4833, 5476 |
| AleI | CACNNNNGTG | 1 cut(s) | 811 |
| Alw21I | GWGCWC | 2 cut(s) | 808, 4174 |
| Alw44I | GTGCAC | 1 cut(s) | 804 |
| AlwI | GGATC | 9 cut(s) | 1499, 1805, 2405, 2418, 2945, 4608, 4898, 5371, 5731 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 223, 1257, 1690, 1748, 1895 |
| Ama87I | CYCGRG | 3 cut(s) | 485, 1086, 1982 |
| ApaI | GGGCCC | 1 cut(s) | 821 |
| ApaLI | GTGCAC | 1 cut(s) | 804 |
| AseI | ATTAAT | 3 cut(s) | 923, 1944, 4635 |
| AsiGI | ACCGGT | 1 cut(s) | 3926 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3890, 5485 |
| Asp718I | GGTACC | 2 cut(s) | 3923, 5268 |
| AspA2I | CCTAGG | 1 cut(s) | 1469 |
| AspLEI | GCGC | 6 cut(s) | 150, 660, 1195, 1498, 2915, 5811 |
| AspS9I | GGNCC | 9 cut(s) | 27, 288, 304, 817, 818, 1654, 3914, 5141, 5816 |
| AsuC2I | CCSGG | 1 cut(s) | 111 |
| AsuII | TTCGAA | 2 cut(s) | 1390, 4022 |
| AvaI | CYCGRG | 3 cut(s) | 485, 1086, 1982 |
| AvaII | GGWCC | 6 cut(s) | 27, 304, 1654, 3914, 5141, 5816 |
| AvrII | CCTAGG | 1 cut(s) | 1469 |
| BaeGI | GKGCMC | 2 cut(s) | 808, 821 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1656, 1689, 4311, 4344 |
| BalI | TGGCCA | 4 cut(s) | 3072, 3950, 4995, 5928 |
| BamHI | GGATCC | 1 cut(s) | 2410 |
| BanI | GGYRCC | 2 cut(s) | 3923, 5268 |
| BanII | GRGCYC | 2 cut(s) | 821, 3480 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2490, 2522 |
| BbsI | GAAGAC | 5 cut(s) | 1008, 3318, 3816, 4386, 5845 |
| Bbv12I | GWGCWC | 2 cut(s) | 808, 4174 |
| BceAI | ACGGC | 2 cut(s) | 1628, 5919 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3632, 3666 |
| BciT130I | CCWGG | 8 cut(s) | 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| BciVI | GTATCC | 2 cut(s) | 1018, 4312 |
| BclI | TGATCA | 2 cut(s) | 2751, 4330 |
| BcnI | CCSGG | 1 cut(s) | 111 |
| BfmI | CTRYAG | 7 cut(s) | 614, 1275, 2676, 3426, 4134, 5235, 6405 |
| BfoI | RGCGCY | 1 cut(s) | 2916 |
| BfrI | CTTAAG | 2 cut(s) | 4468, 4490 |
| BfuAI | ACCTGC | 3 cut(s) | 883, 4849, 6398 |
| BfuI | GTATCC | 2 cut(s) | 1018, 4312 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3115 |
| BglII | AGATCT | 3 cut(s) | 883, 3781, 5888 |
| BlnI | CCTAGG | 1 cut(s) | 1469 |
| Bme1390I | CCNGG | 9 cut(s) | 111, 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| Bme18I | GGWCC | 6 cut(s) | 27, 304, 1654, 3914, 5141, 5816 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 4492, 5098, 5133 |
| BmeT110I | CYCGRG | 3 cut(s) | 485, 1086, 1982 |
| BmgT120I | GGNCC | 9 cut(s) | 27, 288, 304, 817, 818, 1654, 3914, 5141, 5816 |
| BmrFI | CCNGG | 9 cut(s) | 111, 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| BmrI | ACTGGG | 4 cut(s) | 554, 1874, 4994, 5611 |
| BmuI | ACTGGG | 4 cut(s) | 554, 1874, 4994, 5611 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1970, 5043 |
| BpiI | GAAGAC | 5 cut(s) | 1008, 3318, 3816, 4386, 5845 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 5535, 5567 |
| BpmI | CTGGAG | 5 cut(s) | 342, 3827, 3903, 5151, 5672 |
| Bpu14I | TTCGAA | 2 cut(s) | 1390, 4022 |
| BpuEI | CTTGAG | 6 cut(s) | 484, 1654, 2384, 4812, 5234, 6249 |
| BpuMI | CCSGG | 1 cut(s) | 111 |
| BsaHI | GRCGYC | 1 cut(s) | 2983 |
| BsaI | GGTCTC | 2 cut(s) | 4722, 6361 |
| BsaWI | WCCGGW | 1 cut(s) | 3926 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 502, 532 |
| Bse118I | RCCGGY | 2 cut(s) | 1816, 3926 |
| Bse3DI | GCAATG | 2 cut(s) | 3962, 5967 |
| BseBI | CCWGG | 8 cut(s) | 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| BseMI | GCAATG | 2 cut(s) | 3962, 5967 |
| BseMII | CTCAG | 9 cut(s) | 179, 1167, 2714, 2988, 3575, 3776, 4618, 5765, 5840 |
| BseRI | GAGGAG | 5 cut(s) | 205, 671, 2264, 3966, 6120 |
| BseSI | GKGCMC | 2 cut(s) | 808, 821 |
| BseYI | CCCAGC | 1 cut(s) | 5951 |
| BsgI | GTGCAG | 5 cut(s) | 317, 1251, 4984, 5457, 5799 |
| Bsh1236I | CGCG | 1 cut(s) | 1195 |
| Bsh1285I | CGRYCG | 1 cut(s) | 4435 |
| BshNI | GGYRCC | 2 cut(s) | 3923, 5268 |
| BshTI | ACCGGT | 1 cut(s) | 3926 |
| BsiEI | CGRYCG | 1 cut(s) | 4435 |
| BsiHKAI | GWGCWC | 2 cut(s) | 808, 4174 |
| BsiHKCI | CYCGRG | 3 cut(s) | 485, 1086, 1982 |
| BsiSI | CCGG | 3 cut(s) | 110, 1817, 3927 |
| BslFI | GGGAC | 6 cut(s) | 13, 2188, 2411, 2881, 3781, 5191 |
| BsmFI | GGGAC | 6 cut(s) | 13, 2188, 2411, 2881, 3781, 5191 |
| BsmI | GAATGC | 3 cut(s) | 1110, 2357, 4553 |
| Bso31I | GGTCTC | 2 cut(s) | 4722, 6361 |
| BsoBI | CYCGRG | 3 cut(s) | 485, 1086, 1982 |
| Bsp119I | TTCGAA | 2 cut(s) | 1390, 4022 |
| Bsp120I | GGGCCC | 1 cut(s) | 817 |
| Bsp1286I | GDGCHC | 4 cut(s) | 808, 821, 3480, 4174 |
| Bsp1407I | TGTACA | 2 cut(s) | 757, 4114 |
| Bsp19I | CCATGG | 3 cut(s) | 2244, 2439, 4219 |
| BspACI | CCGC | 7 cut(s) | 307, 918, 1617, 1975, 2429, 4669, 5173 |
| BspCNI | CTCAG | 9 cut(s) | 180, 1166, 2713, 2987, 3576, 3777, 4617, 5764, 5839 |
| BspFNI | CGCG | 1 cut(s) | 1195 |
| BspHI | TCATGA | 3 cut(s) | 2083, 3409, 5122 |
| BspMAI | CTGCAG | 3 cut(s) | 618, 5239, 6409 |
| BspMI | ACCTGC | 3 cut(s) | 883, 4849, 6398 |
| BspPI | GGATC | 9 cut(s) | 1499, 1805, 2405, 2418, 2945, 4608, 4898, 5371, 5731 |
| BspQI | GCTCTTC | 1 cut(s) | 1248 |
| BspT104I | TTCGAA | 2 cut(s) | 1390, 4022 |
| BspT107I | GGYRCC | 2 cut(s) | 3923, 5268 |
| BspTI | CTTAAG | 2 cut(s) | 4468, 4490 |
| BspTNI | GGTCTC | 2 cut(s) | 4722, 6361 |
| BsrDI | GCAATG | 2 cut(s) | 3962, 5967 |
| BsrFI | RCCGGY | 2 cut(s) | 1816, 3926 |
| BsrGI | TGTACA | 2 cut(s) | 757, 4114 |
| BssAI | RCCGGY | 2 cut(s) | 1816, 3926 |
| BssNI | GRCGYC | 1 cut(s) | 2983 |
| Bst2UI | CCWGG | 8 cut(s) | 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| Bst6I | CTCTTC | 7 cut(s) | 136, 1026, 1248, 1383, 2440, 3330, 4863 |
| BstACI | GRCGYC | 1 cut(s) | 2983 |
| BstAFI | CTTAAG | 2 cut(s) | 4468, 4490 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 223, 3968, 4409 |
| BstAUI | TGTACA | 2 cut(s) | 757, 4114 |
| BstBI | TTCGAA | 2 cut(s) | 1390, 4022 |
| BstDSI | CCRYGG | 3 cut(s) | 2244, 2439, 4219 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 686 |
| BstFNI | CGCG | 1 cut(s) | 1195 |
| BstH2I | RGCGCY | 1 cut(s) | 2916 |
| BstHHI | GCGC | 6 cut(s) | 150, 660, 1195, 1498, 2915, 5811 |
| BstMCI | CGRYCG | 1 cut(s) | 4435 |
| BstNI | CCWGG | 8 cut(s) | 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| BstNSI | RCATGY | 8 cut(s) | 247, 1643, 2181, 3647, 4512, 4972, 5759, 5978 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1970, 5043 |
| BstSCI | CCNGG | 9 cut(s) | 109, 520, 1256, 2036, 3804, 3919, 4050, 4833, 5476 |
| BstSFI | CTRYAG | 7 cut(s) | 614, 1275, 2676, 3426, 4134, 5235, 6405 |
| BstSLI | GKGCMC | 2 cut(s) | 808, 821 |
| BstUI | CGCG | 1 cut(s) | 1195 |
| BstV2I | GAAGAC | 5 cut(s) | 1008, 3318, 3816, 4386, 5845 |
| BstX2I | RGATCY | 9 cut(s) | 883, 1504, 2410, 2950, 3781, 4600, 5363, 5736, 5888 |
| BstYI | RGATCY | 9 cut(s) | 883, 1504, 2410, 2950, 3781, 4600, 5363, 5736, 5888 |
| BsuI | GTATCC | 2 cut(s) | 1018, 4312 |
| BtgI | CCRYGG | 3 cut(s) | 2244, 2439, 4219 |
| BtsI | GCAGTG | 2 cut(s) | 1460, 4403 |
| BveI | ACCTGC | 3 cut(s) | 883, 4849, 6398 |
| CaiI | CAGNNNCTG | 5 cut(s) | 223, 1257, 1690, 1748, 1895 |
| CciI | TCATGA | 3 cut(s) | 2083, 3409, 5122 |
| CfoI | GCGC | 6 cut(s) | 150, 660, 1195, 1498, 2915, 5811 |
| Cfr10I | RCCGGY | 2 cut(s) | 1816, 3926 |
| Cfr13I | GGNCC | 9 cut(s) | 27, 288, 304, 817, 818, 1654, 3914, 5141, 5816 |
| CseI | GACGC | 2 cut(s) | 2991, 3165 |
| CspAI | ACCGGT | 1 cut(s) | 3926 |
| DraI | TTTAAA | 4 cut(s) | 2821, 3292, 4869, 5260 |
| DraIII | CACNNNGTG | 1 cut(s) | 4409 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2855 |
| DriI | GACNNNNNGTC | 3 cut(s) | 4492, 5098, 5133 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2855 |
| EaeI | YGGCCR | 4 cut(s) | 3070, 3948, 4993, 5926 |
| Eam1104I | CTCTTC | 7 cut(s) | 136, 1026, 1248, 1383, 2440, 3330, 4863 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 4492, 5098, 5133 |
| EarI | CTCTTC | 7 cut(s) | 136, 1026, 1248, 1383, 2440, 3330, 4863 |
| Eco24I | GRGCYC | 2 cut(s) | 821, 3480 |
| Eco31I | GGTCTC | 2 cut(s) | 4722, 6361 |
| Eco32I | GATATC | 2 cut(s) | 744, 3712 |
| Eco47I | GGWCC | 6 cut(s) | 27, 304, 1654, 3914, 5141, 5816 |
| Eco57I | CTGAAG | 7 cut(s) | 694, 1050, 1593, 2517, 3830, 3839, 4844 |
| Eco88I | CYCGRG | 3 cut(s) | 485, 1086, 1982 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 686 |
| EcoO109I | RGGNCCY | 5 cut(s) | 27, 817, 818, 3914, 5816 |
| EcoRI | GAATTC | 1 cut(s) | 5191 |
| EcoRII | CCWGG | 8 cut(s) | 520, 1256, 2036, 3804, 3919, 4050, 4833, 5476 |
| EcoRV | GATATC | 2 cut(s) | 744, 3712 |
| EcoT22I | ATGCAT | 3 cut(s) | 78, 124, 5064 |
| EcoT38I | GRGCYC | 2 cut(s) | 821, 3480 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1526, 1558, 1759, 1791 |
| FaqI | GGGAC | 6 cut(s) | 13, 2188, 2411, 2881, 3781, 5191 |
| FauI | CCCGC | 2 cut(s) | 2436, 5166 |
| FauNDI | CATATG | 5 cut(s) | 317, 810, 3507, 4166, 5042 |
| FbaI | TGATCA | 2 cut(s) | 2751, 4330 |
| FblI | GTMKAC | 5 cut(s) | 201, 509, 1140, 1851, 4431 |
| FriOI | GRGCYC | 2 cut(s) | 821, 3480 |
| GlaI | GCGC | 6 cut(s) | 149, 659, 1194, 1497, 2914, 5810 |
| GsaI | CCCAGC | 1 cut(s) | 5955 |
| GsuI | CTGGAG | 5 cut(s) | 342, 3827, 3903, 5151, 5672 |
| HaeII | RGCGCY | 1 cut(s) | 2916 |
| HapII | CCGG | 3 cut(s) | 110, 1817, 3927 |
| HgaI | GACGC | 2 cut(s) | 2991, 3165 |
| HhaI | GCGC | 6 cut(s) | 150, 660, 1195, 1498, 2915, 5811 |
| Hin1I | GRCGYC | 1 cut(s) | 2983 |
| Hin6I | GCGC | 6 cut(s) | 148, 658, 1193, 1496, 2913, 5809 |
| HinP1I | GCGC | 6 cut(s) | 148, 658, 1193, 1496, 2913, 5809 |
| HincII | GTYRAC | 6 cut(s) | 1141, 1407, 2635, 3842, 4432, 4875 |
| HindII | GTYRAC | 6 cut(s) | 1141, 1407, 2635, 3842, 4432, 4875 |
| HindIII | AAGCTT | 6 cut(s) | 627, 1483, 1935, 2298, 2621, 2880 |
| HpaI | GTTAAC | 1 cut(s) | 1407 |
| HpaII | CCGG | 3 cut(s) | 110, 1817, 3927 |
| Hpy99I | CGWCG | 2 cut(s) | 2203, 5096 |
| HpyCH4IV | ACGT | 4 cut(s) | 3631, 4336, 4459, 4978 |
| HpySE526I | ACGT | 4 cut(s) | 3631, 4336, 4459, 4978 |
| Hsp92I | GRCGYC | 1 cut(s) | 2983 |
| HspAI | GCGC | 6 cut(s) | 148, 658, 1193, 1496, 2913, 5809 |
| KflI | GGGWCCC | 1 cut(s) | 27 |
| KpnI | GGTACC | 2 cut(s) | 3927, 5272 |
| Ksp22I | TGATCA | 2 cut(s) | 2751, 4330 |
| KspAI | GTTAAC | 1 cut(s) | 1407 |
| LguI | GCTCTTC | 1 cut(s) | 1248 |
| LmnI | GCTCC | 7 cut(s) | 523, 2277, 3025, 3808, 4308, 5176, 6205 |
| MaeII | ACGT | 4 cut(s) | 3631, 4336, 4459, 4978 |
| MfeI | CAATTG | 2 cut(s) | 4323, 4398 |
| MflI | RGATCY | 9 cut(s) | 883, 1504, 2410, 2950, 3781, 4600, 5363, 5736, 5888 |
| MhlI | GDGCHC | 4 cut(s) | 808, 821, 3480, 4174 |
| MlsI | TGGCCA | 4 cut(s) | 3072, 3950, 4995, 5928 |
| MluNI | TGGCCA | 4 cut(s) | 3072, 3950, 4995, 5928 |
| MmeI | TCCRAC | 7 cut(s) | 228, 1313, 1681, 3066, 3238, 3261, 4252 |
| Mox20I | TGGCCA | 4 cut(s) | 3072, 3950, 4995, 5928 |
| Mph1103I | ATGCAT | 3 cut(s) | 78, 124, 5064 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3890, 5485 |
| MscI | TGGCCA | 4 cut(s) | 3072, 3950, 4995, 5928 |
| MslI | CAYNNNNRTG | 8 cut(s) | 242, 316, 423, 811, 1115, 3877, 5067, 5850 |
| Msp20I | TGGCCA | 4 cut(s) | 3072, 3950, 4995, 5928 |
| MspA1I | CMGCKG | 2 cut(s) | 301, 1619 |
| MspCI | CTTAAG | 2 cut(s) | 4468, 4490 |
| MspI | CCGG | 3 cut(s) | 110, 1817, 3927 |
| MspR9I | CCNGG | 9 cut(s) | 111, 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| MunI | CAATTG | 2 cut(s) | 4323, 4398 |
| Mva1269I | GAATGC | 3 cut(s) | 1110, 2357, 4553 |
| MvaI | CCWGG | 8 cut(s) | 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| MvnI | CGCG | 1 cut(s) | 1195 |
| NciI | CCSGG | 1 cut(s) | 111 |
| NcoI | CCATGG | 3 cut(s) | 2244, 2439, 4219 |
| NdeI | CATATG | 5 cut(s) | 317, 810, 3507, 4166, 5042 |
| NmeAIII | GCCGAG | 1 cut(s) | 6302 |
| NmuCI | GTSAC | 3 cut(s) | 691, 2066, 2231 |
| NsiI | ATGCAT | 3 cut(s) | 78, 124, 5064 |
| NspI | RCATGY | 8 cut(s) | 247, 1643, 2181, 3647, 4512, 4972, 5759, 5978 |
| NspV | TTCGAA | 2 cut(s) | 1390, 4022 |
| OliI | CACNNNNGTG | 1 cut(s) | 811 |
| PaeI | GCATGC | 1 cut(s) | 3647 |
| PaeR7I | CTCGAG | 1 cut(s) | 1982 |
| PagI | TCATGA | 3 cut(s) | 2083, 3409, 5122 |
| PaqCI | CACCTGC | 1 cut(s) | 6398 |
| PciI | ACATGT | 3 cut(s) | 2177, 4508, 5974 |
| PciSI | GCTCTTC | 1 cut(s) | 1248 |
| PctI | GAATGC | 3 cut(s) | 1110, 2357, 4553 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3890, 5485 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1122 |
| PfoI | TCCNGGA | 1 cut(s) | 2036 |
| PinAI | ACCGGT | 1 cut(s) | 3926 |
| PpuMI | RGGWCCY | 3 cut(s) | 27, 3914, 5816 |
| PscI | ACATGT | 3 cut(s) | 2177, 4508, 5974 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1970, 5043 |
| PshBI | ATTAAT | 3 cut(s) | 923, 1944, 4635 |
| PsiI | TTATAA | 2 cut(s) | 2028, 5645 |
| Psp1406I | AACGTT | 2 cut(s) | 4336, 4978 |
| Psp5II | RGGWCCY | 3 cut(s) | 27, 3914, 5816 |
| Psp6I | CCWGG | 8 cut(s) | 520, 1256, 2036, 3804, 3919, 4050, 4833, 5476 |
| PspFI | CCCAGC | 1 cut(s) | 5951 |
| PspGI | CCWGG | 8 cut(s) | 520, 1256, 2036, 3804, 3919, 4050, 4833, 5476 |
| PspOMI | GGGCCC | 1 cut(s) | 817 |
| PspPI | GGNCC | 9 cut(s) | 27, 288, 304, 817, 818, 1654, 3914, 5141, 5816 |
| PspPPI | RGGWCCY | 3 cut(s) | 27, 3914, 5816 |
| PstI | CTGCAG | 3 cut(s) | 618, 5239, 6409 |
| PstNI | CAGNNNCTG | 5 cut(s) | 223, 1257, 1690, 1748, 1895 |
| PsuI | RGATCY | 9 cut(s) | 883, 1504, 2410, 2950, 3781, 4600, 5363, 5736, 5888 |
| PvuII | CAGCTG | 1 cut(s) | 301 |
| RseI | CAYNNNNRTG | 8 cut(s) | 242, 316, 423, 811, 1115, 3877, 5067, 5850 |
| SalI | GTCGAC | 2 cut(s) | 1139, 4430 |
| SapI | GCTCTTC | 1 cut(s) | 1248 |
| Sau96I | GGNCC | 9 cut(s) | 27, 288, 304, 817, 818, 1654, 3914, 5141, 5816 |
| ScrFI | CCNGG | 9 cut(s) | 111, 522, 1258, 2038, 3806, 3921, 4052, 4835, 5478 |
| SduI | GDGCHC | 4 cut(s) | 808, 821, 3480, 4174 |
| SfcI | CTRYAG | 7 cut(s) | 614, 1275, 2676, 3426, 4134, 5235, 6405 |
| Sfr274I | CTCGAG | 1 cut(s) | 1982 |
| SfuI | TTCGAA | 2 cut(s) | 1390, 4022 |
| SinI | GGWCC | 6 cut(s) | 27, 304, 1654, 3914, 5141, 5816 |
| SlaI | CTCGAG | 1 cut(s) | 1982 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 242, 316, 423, 811, 1115, 3877, 5067, 5850 |
| SmlI | CTYRAG | 9 cut(s) | 463, 1633, 1982, 2363, 4468, 4490, 4827, 5249, 6264 |
| SmoI | CTYRAG | 9 cut(s) | 463, 1633, 1982, 2363, 4468, 4490, 4827, 5249, 6264 |
| SphI | GCATGC | 1 cut(s) | 3647 |
| SsiI | CCGC | 7 cut(s) | 307, 918, 1617, 1975, 2429, 4669, 5173 |
| StyD4I | CCNGG | 9 cut(s) | 109, 520, 1256, 2036, 3804, 3919, 4050, 4833, 5476 |
| TaiI | ACGT | 4 cut(s) | 3634, 4339, 4462, 4981 |
| TatI | WGTACW | 5 cut(s) | 10, 757, 4114, 5667, 5993 |
| TauI | GCSGC | 1 cut(s) | 920 |
| TseFI | GTSAC | 3 cut(s) | 691, 2066, 2231 |
| Tsp45I | GTSAC | 3 cut(s) | 691, 2066, 2231 |
| TspGWI | ACGGA | 3 cut(s) | 1830, 2368, 5906 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1122 |
| Vha464I | CTTAAG | 2 cut(s) | 4468, 4490 |
| VneI | GTGCAC | 1 cut(s) | 804 |
| VpaK11BI | GGWCC | 6 cut(s) | 27, 304, 1654, 3914, 5141, 5816 |
| VspI | ATTAAT | 3 cut(s) | 923, 1944, 4635 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 686 |
| XbaI | TCTAGA | 4 cut(s) | 1094, 2383, 3316, 4417 |
| XceI | RCATGY | 8 cut(s) | 247, 1643, 2181, 3647, 4512, 4972, 5759, 5978 |
| XcmI | CCANNNNNNNNNTGG | 6 cut(s) | 298, 1254, 1296, 4226, 4891, 5696 |
| XhoI | CTCGAG | 1 cut(s) | 1982 |
| XmaJI | CCTAGG | 1 cut(s) | 1469 |
| XmiI | GTMKAC | 5 cut(s) | 201, 509, 1140, 1851, 4431 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3890, 5485 |
| Zsp2I | ATGCAT | 3 cut(s) | 78, 124, 5064 |