pycom17g15460

AAA domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
13495968 .. 13505177
9210 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g15460.16

Sequence Viewer

Length: 5349 bp
ATGGAGAAGAAACTATCCTCGAGAAGAGAGCTGTTGGACCGCTGGAGAGTCATTGAGGAGGAAGCGGACGAAGACGACGATCGCATTGACCCCTCCAAACGGCACCGTCTCCACCACAACAAAGAACAATGGTTTGCAGATGCATTTAGTTTCTTGATCTGTTTGCCAAAAGAAAATCATATTTGGTGTGGGTCGTGGGACTTAATGGGGCCTCTTCTGGAGACATTTTATAACTACTTCAAAGATGACAATGCTGATTCTCCTCTTAGACAACTATGGAGGAGAATCTCTGAGGAAATGCGGCAGTGCATCCAGTGCATTTCCCAGCACTATCAAGCCCAAGAGATGTATATCATGGAGTATGAGACAAGTTCTATTGGTCCCCTCTTGGATGTTTTGCGAAGTCTCGATGAGGAAAGAGTGACACAGCACTTGATAGAGATAAATACTAAATTAGCCCGAAAAGAATATGATGCTGCCCGTGATAATGCAGAAGTCATTAGTGTCATGTATGAGGTTCTAATGTTCCCTGTATTATTGGATGATGAGTCCTTATTCACTGAGTTTGAAAGATTCATTGAAGCAGTTGACAGCATGCATGAACTGGCTCTGGCTGGACAGCAACAGTTTCCGGGTGTTTATGCATTATTTTTCTTCAAGAGAAGAGTGCGCTCTGTTGGTCATCGTCTAGCTGGTTCTATGGGAAAACTGAGGAGAGCAACAGATTTGGAACCCTTGCAGCCTATACTTAAGAAATTCATCGGCTTCTTGGAGACTGAAGTGTTACCGTCAACTTTGAAAACTTCAAGGCCCAGAGTGCAGTTGGAGCGTACATCCATATGGGTTGGAATAAAATCTCTGCTTGGGTTTTTGGAACCTCCAGCTTTTGAAGAAGGGATATTAGAGCGCTATCCTATTTTTCTTGATATTGTACTCAACCATATTAGTGGCGATTCATCGGAATTCTCTCATGCAGTTTCTTGCTTGAGAATACTCTTTGAAATGCTTGGTTGTAAGCTTTGGTTGAGATCAACACTGTCTCCAAGTGTGATGCGGAATACTCTGATAGGGCAGTGTTTTCATACTCGAAGCGAGAAAAGCCATAAGGATATTTTTGATCTTCTTCAGCCTTTTCTGCAGTCTCTTGAAGCTTTGCAAGATGGGGAACATGAAAAACAGCGCAGGCATTTTCTCTATTTTCTCCTCATTCAGGTGCCTGCGAGCAGTAACTTCAGTGGCTTAACGAGGCAAAAGGCTTGTCAGATAGCACTCCTTATTATACATCGAGGCTACACGATGAACCCGCCTTGTCCTCCTTCTGAATGCGCACATATGTGGGGCCCTTCTCTTGTGTCATCGTTAAGGGATTCTTCACTTCACAATTCTCTAAGGCAACCTGCCTTTGATCTGATACAAACTATCATGGTGTCTGATGCTGCTGTGTTAGTAAGCACAGTGCTAAATACCCACCTAAACCTTTGTTCTGAAAGAAGCATGTCTTATGAGTTGAATGATGAAGATGATGAGGGGCTTCCATTTGCTGAGAATACAAAAGAGCAGGATAATAGCTCATGGAGTGAATTTAGCATACAAAGTAAAATTGCATCCCGGGAATTTAGAGAGTGGATGTGCATTCCAATGTTATGGATTGATGTCCTTGCTGACATCAATCCATCAGTTCTTCCTATATCATTTTCCAAGGCTGTTTTGTGGGCACGATCTCGTTTTCCTATGGTAGAACCAGTGACTGGTGCAGAAACGGCCCTTGCAGTCAGAACCTGGCTTTCATCATCTTCTGCAGAAATATCTTCAACCTTTGGGTGGAAGGTTCCTACTGGTTCTGATGATGGTGGAGATGTAGTGTCAAAGAATGCAATAAAAGCCTCGACAATGCCTCTTCCTCTAATACGAACATTCAACAGGTTAACAACACATTTTCTGGTTCATGTGGGGCAGGGGGAACTTCGTAAGCAGTGGACGTGGGAGCCAAGGATGGGTGAAAGCTTGTTTCTCTCACTTATAGATCCCAATGATGATGTAAGGAAATTTGGCAAGTCAATCCTGGAACAGGTTTCCAATACACAGGGTCTTGCTTGTAGTTTGACATTCCTATGTTCTTATAGGTCTTCATTGTCTGCTGTCTTTTTGGGCTTGAGACATGCTGTGAAACTGGTCCAACTGGATATTGTTTTATTAAAGTTTCAGACTCTGCATCATTTTTTCTTTGTTCTGCGGAGACTACTTATTGATGGGGATTCACGTGCTGCGGATATTCCAGAATCTGACCACTTAAATATGGCAAAATTCTCTTCCCAAGGTGGATTTCTCAGGCAGCCAGTCTTTGATTCATCCCCTCCCAACAATGGGCATTCACCAAATGTTGACCTAAATTTACTGAAAAGATTTTATAACTTGATATCGGAAACTGCATGGCCTTCCATCTGCAGGTGCTTATTGGAAGGAAAAGCATTTATTGATAACAGTATTAATCAGATGACTTGTGTACGCATACTTGAGATCCTCCCATGTGTATTTGAAAGAATATACTCTGGCATACGGGAAAACACATGTGACTTCTCATGGCTACATGATTTTACGGATTGGGGAAAGTCATCACTTAAAACTGTGGTTGTATACTGGCAACGAACAATCACATCCTTGTTGAAGCTGCTGAAAGGGTCATATAACAGTGCTATTGCATCGACAATCAGCACCATTGAAAATCTCATTTCATGTGATTGCGTTTGCATGGATGAATTGATGGAACAAGTGTCACGCCTTTCTGTTTCTCTATCTAAGGAAGCCTCTTCTAGTATTGGAAAGACCGACCTCTGTTCAAATGCCTTGTTTCCTGAAGGCTTATCTTTTGAGAAGTATTCAGCTCCTTATGTGCAACCCTTGTCCATCAAGGATCCAGATGTCCAAATCTTGCACTCACCATCGGTGGATAATAGAAAGCATAGAGATGACATGATTGTCCTTTCTGATGAGGAAACTAAAGCTGTTTCACCAGATGAAGTAATTTTGTCTGATACTAAGGTGAGTCGGTGTATGGCGGATGACAAGACAATTGCTCGTAATGATGACAAAAGCACTTCATATACCGAATCTGTGAAGAAGGTTTCTGGTGTTTATACATCCAAGTTTTATTTGAAGGCCTTTGAGAAAAGAGATCCTACAGATAGTGCTCACTTGGCTGTTCAGAAACGGGAGATTGATAGATCTATAGGAAAACTGCCACCTGTTTCCTCCCTGAAATCAAAGGATGAAGATAATAGCAGGAAAGCATTAACATCTGATAGCAATATAGCTGATTCTGAAAAATTCCAGAATAGAACTAGTACTAGTAACTCATATGATAGTACGGTTAGTTCCAAAAAGTTGAATCAAGCTCCCAACGCTTCATTGAAAGAGATAGTAAGTGATGCCAAAGACAATTCCTTGGAGTCTTCTCTCAATTCGGCCAAGCATCAGCAGTCACCTTTGGAAAAAATTAGCATTGCTGCTCCTAAACGACAACTCATTCAGCTTAAATCACCTTTGCAGAACAGGCCTGGCCATTTACAAAGGCTGGAAGCTCGAGCGAAAAGGTTCAAGCCGCCAAAGCTTGATGACTGGTATAGACCTATCTTAGAATTAGATTACTTTTCACTGGTGGGGGTAGCATCTGGAAGTGAAAATGATAACCAAAAACGTGCAAAATTAAAGGAGGTTCCTGTGCAGTTCCAATCACCTGAACAGTATGTTGAAATTTTTTGTCCATTGGTTTTGGAGGAGTTTAAAGCACAGTTACATAGTTCTTTTATAGAAATGTCTTCATGGGAAGAGATATATTTTGGAACTTTATCAGTGCTTTCAGTTGAAAGAATTGATGATTTTCATCATGTTCGCTTTGCTCACGATGACAAGGATTCTACAATGTCAAGCAACTTTTCAGAAAATGACCTAGTATTACTAACAAAAGAGCCCCCCCAAAAATCTTCTCATGATGTTCATGTGCTTGGGAAGGTGGAGAGGCGTGAGTGGGACAATAAAAGAAGGTTAAGTATACTACTCATCAGGTTTTATCTGTTGAATGGTACGTCACGTTTACATCAAGCCAGAAGGAACCTCCTTGAACGCAGTAAATGGCATGCAAGTCGTATTATGAACATTACACCTCAACTTCGTGAATTTCAGGCATTATCATCACTAAAGGATATCCCTTTACTTCCAGTTATTTTGAAGCCTGCGAATGATTCTTATGATTCTAGTGAAAGCAAGGAAGTAGATCTGAGCAAACTGTCCCAACCATTGCAGCGTATACTGAAGTCATCCTTTAATGACAGTCAACTTCAAGCTATTAGTGTTGCCACTGGAACACCTAGGCAGAAGAAAGATTTTGAATTATCCCTTATTCAGGGTCCTCCAGGTACTGGTAAGACAAGAACAATTGTGGCCATTGTCAGCGCTTTGCTTGCTTCCCCTACCCATAGGACAGATCCTGACGAAAAAATTCATGATCTCAGTTTGAAGCAAATTTCAGTTCCCAAGATTAACCAGGCTGCTGCTGTTGCAAGGGCGTGGCAGGATGCAGCCTTGGCCAGACAAATAAACGAGGATGCCCAAAGGAATATGAACGCTGTAGAAAGTAGCTTGAGAGGAAGGGTGCTCATCTGTGCCCAGTCTAATGCTGCTGTTGATGAATTAGTGTCAAGGATTTCTAGCCAAGGGCTGTATGGAAGTGATGGAAAGATGTATAAGCCATATCTTGTGCGGGTTGGGAATGCGAAAACAGTTCATCCAAATTCGCTACCATTCTTCATTGATACACTTGTTGATCAACGGTTGGTGGATGAGAAGATGAAATTGACAGACACAAAGAATGATTCGAGTGTCGATTCTTCAACTACACTGCGCTCTAATCTTGAAAAGTTAGTCGATCGAATTAGATTCTATGAAGCCAAACGTGCTAACTTAAATGATCGGGATCCTGACCTTAAAAAGTCTTCTGTAGATGATAATTATAAGGGGGATGATGGGAAGGACATGTCTGATGCAGAAATATCTTTCAAGTTAAGAAAACTTTATGAGCAAAAGAAGCAAATTTATAAGGATCTTAGTATTGTTCAGCAGCAGGAGAAGAAAACTAATGAAGAAATCAGAGGACTTAAATATAAATTGCGGAAGTCTATACTAAGAGAAGCTGCAATAGTGGTAACTACATTAAGTGGCTGCGGGGGATCGATCTTTATGGAGTGTGCTCTGAATCTATGTCAAGTCATAAGTTTGGCAGTCCACCTGAACATACTCTTTTTGATGCTGTTGTTATTGATGAAGCTGCTCAAGCTCTGGAACCTGCTACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1783

Amino Acids

202.55

Weight (kDa)

6.65

Isoelectric Point (pI)

49.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 231, 2409, 5007, 5091
AarI CACCTGC 1 cut(s) 2436
AasI GACNNNNNNGTC 1 cut(s) 2975
Acc16I TGCGCA 1 cut(s) 1327
Acc36I ACCTGC 2 cut(s) 1405, 2436
AccB1I GGYRCC 2 cut(s) 102, 1213
AccB7I CCANNNNNTGG 2 cut(s) 1748, 4415
AccI GTMKAC 3 cut(s) 2634, 4048, 4303
AcoI YGGCCR 4 cut(s) 3462, 3556, 4437, 4581
AcuI CTGAAG 5 cut(s) 798, 1109, 1216, 2874, 4328
AcvI CACGTG 1 cut(s) 2261
AfaI GTAC 7 cut(s) 832, 933, 2505, 3343, 3364, 4081, 4414
AfeI AGCGCT 2 cut(s) 908, 4450
AflII CTTAAG 1 cut(s) 749
AflIII ACRYGT 2 cut(s) 2567, 5028
AhlI ACTAGT 2 cut(s) 3338, 3344
AjiI CACGTC 1 cut(s) 1980
AjnI CCWGG 5 cut(s) 1778, 2061, 3553, 4408, 4539
AjuI GAANNNNNNNTTGG 2 cut(s) 2307, 2339
AleI CACNNNNGTG 1 cut(s) 1333
Alw21I GWGCWC 3 cut(s) 3190, 4653, 5245
Alw26I GTCTC 9 cut(s) 113, 215, 359, 410, 767, 1044, 1146, 2149, 2230
AlwNI CAGNNNCTG 6 cut(s) 1748, 1779, 2209, 2282, 4415, 4484
Ama87I CYCGRG 3 cut(s) 19, 1608, 3579
Aor51HI AGCGCT 2 cut(s) 908, 4450
ApaI GGGCCC 1 cut(s) 1343
ArsI GACNNNNNNTTYG 2 cut(s) 1243, 1275
AseI ATTAAT 1 cut(s) 2487
Asp700I GAANNNNTTC 2 cut(s) 3590, 4494
AspA2I CCTAGG 1 cut(s) 4364
AspLEI GCGC 6 cut(s) 672, 909, 1182, 1328, 4451, 4899
AspS9I GGNCC 9 cut(s) 37, 209, 380, 810, 1339, 1340, 1762, 2173, 4403
AsuC2I CCSGG 3 cut(s) 633, 1609, 1610
AsuHPI GGTGA 8 cut(s) 2009, 2364, 2928, 3000, 3052, 3471, 3528, 3723
AvaI CYCGRG 3 cut(s) 19, 1608, 3579
AvaII GGWCC 4 cut(s) 37, 380, 2173, 4403
AvrII CCTAGG 1 cut(s) 4364
BaeGI GKGCMC 3 cut(s) 1343, 1717, 4663
BaeI ACNNNNGTAYC 4 cut(s) 3024, 3057, 4800, 4833
BalI TGGCCA 3 cut(s) 3558, 4439, 4583
BamHI GGATCC 2 cut(s) 2911, 4969
BanI GGYRCC 2 cut(s) 102, 1213
BanII GRGCYC 2 cut(s) 1343, 3969
BbrPI CACGTG 1 cut(s) 2261
BbsI GAAGAC 5 cut(s) 78, 2118, 3441, 3807, 4980
Bbv12I GWGCWC 3 cut(s) 3190, 4653, 5245
BceAI ACGGC 2 cut(s) 116, 1776
BcgI CGANNNNNNTGC 2 cut(s) 4121, 4155
BciT130I CCWGG 5 cut(s) 1780, 2063, 3555, 4410, 4541
BclI TGATCA 1 cut(s) 4819
BcnI CCSGG 3 cut(s) 633, 1609, 1610
BcoDI GTCTC 9 cut(s) 113, 215, 359, 410, 767, 1044, 1146, 2149, 2230
BcuI ACTAGT 2 cut(s) 3338, 3344
BfaI CTAG 8 cut(s) 689, 2811, 3339, 3345, 3947, 4251, 4365, 4704
BfmI CTRYAG 7 cut(s) 1136, 1797, 2443, 3177, 3225, 4623, 4992
BfoI RGCGCY 2 cut(s) 910, 4452
BfrI CTTAAG 1 cut(s) 749
BfuAI ACCTGC 2 cut(s) 1405, 2436
BglII AGATCT 2 cut(s) 3221, 4270
BlnI CCTAGG 1 cut(s) 4364
BmcAI AGTACT 1 cut(s) 3343
Bme1390I CCNGG 8 cut(s) 633, 1609, 1610, 1780, 2063, 3555, 4410, 4541
Bme18I GGWCC 4 cut(s) 37, 380, 2173, 4403
BmeT110I CYCGRG 3 cut(s) 19, 1608, 3579
BmgBI CACGTC 1 cut(s) 1980
BmgT120I GGNCC 9 cut(s) 37, 209, 380, 810, 1339, 1340, 1762, 2173, 4403
BmrFI CCNGG 8 cut(s) 633, 1609, 1610, 1780, 2063, 3555, 4410, 4541
BmrI ACTGGG 1 cut(s) 4657
BmuI ACTGGG 1 cut(s) 4657
BpiI GAAGAC 5 cut(s) 78, 2118, 3441, 3807, 4980
BpmI CTGGAG 4 cut(s) 64, 239, 864, 4392
BpuEI CTTGAG 5 cut(s) 1006, 2173, 2534, 4657, 5309
BpuMI CCSGG 3 cut(s) 633, 1609, 1610
Bsa29I ATCGAT 1 cut(s) 5225
BsaAI YACGTR 1 cut(s) 2261
BsaBI GATNNNNATC 3 cut(s) 350, 3879, 4968
BsaJI CCNNGG 8 cut(s) 1608, 1698, 1988, 2314, 3441, 4364, 4578, 4708
BsaXI ACNNNNNCTCC 4 cut(s) 1024, 1054, 1845, 1875
Bse3DI GCAATG 2 cut(s) 3498, 4292
Bse8I GATNNNNATC 3 cut(s) 350, 3879, 4968
BseBI CCWGG 5 cut(s) 1780, 2063, 3555, 4410, 4541
BseCI ATCGAT 1 cut(s) 5225
BseDI CCNNGG 8 cut(s) 1608, 1698, 1988, 2314, 3441, 4364, 4578, 4708
BseJI GATNNNNATC 3 cut(s) 350, 3879, 4968
BseMI GCAATG 2 cut(s) 3498, 4292
BseMII CTCAG 7 cut(s) 282, 552, 701, 1533, 2341, 4265, 4519
BseRI GAGGAG 6 cut(s) 71, 252, 295, 727, 1193, 3788
BseSI GKGCMC 3 cut(s) 1343, 1717, 4663
BseYI CCCAGC 1 cut(s) 324
BsgI GTGCAG 3 cut(s) 839, 1773, 3740
Bsh1285I CGRYCG 2 cut(s) 82, 4924
BshNI GGYRCC 2 cut(s) 102, 1213
BshVI ATCGAT 1 cut(s) 5225
BsiEI CGRYCG 2 cut(s) 82, 4924
BsiHKAI GWGCWC 3 cut(s) 3190, 4653, 5245
BsiHKCI CYCGRG 3 cut(s) 19, 1608, 3579
BsiSI CCGG 2 cut(s) 632, 1609
BslFI GGGAC 4 cut(s) 212, 366, 4040, 4270
BsmAI GTCTC 9 cut(s) 113, 215, 359, 410, 767, 1044, 1146, 2149, 2230
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 4 cut(s) 212, 366, 4040, 4270
BsmI GAATGC 5 cut(s) 1328, 1632, 1876, 2368, 4771
BsoBI CYCGRG 3 cut(s) 19, 1608, 3579
Bsp120I GGGCCC 1 cut(s) 1339
Bsp1286I GDGCHC 7 cut(s) 1343, 1717, 3190, 3969, 4653, 4663, 5245
BspCNI CTCAG 7 cut(s) 283, 553, 702, 1534, 2340, 4266, 4518
BspDI ATCGAT 1 cut(s) 5225
BspHI TCATGA 2 cut(s) 3985, 4498
BspMAI CTGCAG 3 cut(s) 1140, 1801, 2447
BspMI ACCTGC 2 cut(s) 1405, 2436
BspT107I GGYRCC 2 cut(s) 102, 1213
BspTI CTTAAG 1 cut(s) 749
BsrDI GCAATG 2 cut(s) 3498, 4292
BssECI CCNNGG 8 cut(s) 1608, 1698, 1988, 2314, 3441, 4364, 4578, 4708
BssNAI GTATAC 3 cut(s) 2635, 4049, 4304
BssT1I CCWWGG 7 cut(s) 1698, 1988, 2314, 3441, 4364, 4578, 4708
Bst1107I GTATAC 3 cut(s) 2635, 4049, 4304
Bst2UI CCWGG 5 cut(s) 1780, 2063, 3555, 4410, 4541
Bst6I CTCTTC 7 cut(s) 19, 219, 658, 1902, 2314, 2812, 3819
BstAFI CTTAAG 1 cut(s) 749
BstAPI GCANNNNNTGC 1 cut(s) 315
BstBAI YACGTR 1 cut(s) 2261
BstC8I GCNNGC 7 cut(s) 596, 1184, 1218, 1222, 4134, 4230, 4458
BstENI CCTNNNNNAGG 3 cut(s) 1208, 2066, 4397
BstH2I RGCGCY 2 cut(s) 910, 4452
BstHHI GCGC 6 cut(s) 672, 909, 1182, 1328, 4451, 4899
BstMAI GTCTC 9 cut(s) 113, 215, 359, 410, 767, 1044, 1146, 2149, 2230
BstMCI CGRYCG 2 cut(s) 82, 4924
BstNI CCWGG 5 cut(s) 1780, 2063, 3555, 4410, 4541
BstNSI RCATGY 6 cut(s) 598, 1498, 2162, 2571, 4136, 5032
BstSCI CCNGG 8 cut(s) 631, 1607, 1608, 1778, 2061, 3553, 4408, 4539
BstSFI CTRYAG 7 cut(s) 1136, 1797, 2443, 3177, 3225, 4623, 4992
BstSLI GKGCMC 3 cut(s) 1343, 1717, 4663
BstV2I GAAGAC 5 cut(s) 78, 2118, 3441, 3807, 4980
BstX2I RGATCY 9 cut(s) 2023, 2517, 2911, 3172, 3221, 4270, 4480, 4969, 5095
BstXI CCANNNNNNTGG 2 cut(s) 947, 1644
BstYI RGATCY 9 cut(s) 2023, 2517, 2911, 3172, 3221, 4270, 4480, 4969, 5095
BstZ17I GTATAC 3 cut(s) 2635, 4049, 4304
Bsu15I ATCGAT 1 cut(s) 5225
BsuTUI ATCGAT 1 cut(s) 5225
BtrI CACGTC 1 cut(s) 1980
BtsI GCAGTG 4 cut(s) 311, 1079, 1979, 4892
BveI ACCTGC 2 cut(s) 1405, 2436
Cac8I GCNNGC 7 cut(s) 596, 1184, 1218, 1222, 4134, 4230, 4458
CaiI CAGNNNCTG 6 cut(s) 1748, 1779, 2209, 2282, 4415, 4484
CciI TCATGA 2 cut(s) 3985, 4498
CfoI GCGC 6 cut(s) 672, 909, 1182, 1328, 4451, 4899
Cfr13I GGNCC 9 cut(s) 37, 209, 380, 810, 1339, 1340, 1762, 2173, 4403
Cfr9I CCCGGG 1 cut(s) 1608
ClaI ATCGAT 1 cut(s) 5225
Csp6I GTAC 7 cut(s) 831, 932, 2504, 3342, 3363, 4080, 4413
CviQI GTAC 7 cut(s) 831, 932, 2504, 3342, 3363, 4080, 4413
DraI TTTAAA 1 cut(s) 3781
DrdI GACNNNNNNGTC 1 cut(s) 2975
DseDI GACNNNNNNGTC 1 cut(s) 2975
EaeI YGGCCR 4 cut(s) 3462, 3556, 4437, 4581
Eam1104I CTCTTC 7 cut(s) 19, 219, 658, 1902, 2314, 2812, 3819
EarI CTCTTC 7 cut(s) 19, 219, 658, 1902, 2314, 2812, 3819
EciI GGCGGA 1 cut(s) 3071
Eco130I CCWWGG 7 cut(s) 1698, 1988, 2314, 3441, 4364, 4578, 4708
Eco147I AGGCCT 2 cut(s) 3158, 3553
Eco24I GRGCYC 2 cut(s) 1343, 3969
Eco32I GATATC 2 cut(s) 2418, 4201
Eco47I GGWCC 4 cut(s) 37, 380, 2173, 4403
Eco47III AGCGCT 2 cut(s) 908, 4450
Eco57I CTGAAG 5 cut(s) 798, 1109, 1216, 2874, 4328
Eco72I CACGTG 1 cut(s) 2261
Eco88I CYCGRG 3 cut(s) 19, 1608, 3579
EcoNI CCTNNNNNAGG 3 cut(s) 1208, 2066, 4397
EcoO109I RGGNCCY 4 cut(s) 209, 1339, 1340, 4403
EcoRI GAATTC 1 cut(s) 962
EcoRII CCWGG 5 cut(s) 1778, 2061, 3553, 4408, 4539
EcoRV GATATC 2 cut(s) 2418, 4201
EcoT14I CCWWGG 7 cut(s) 1698, 1988, 2314, 3441, 4364, 4578, 4708
EcoT22I ATGCAT 3 cut(s) 145, 600, 646
EcoT38I GRGCYC 2 cut(s) 1343, 3969
ErhI CCWWGG 7 cut(s) 1698, 1988, 2314, 3441, 4364, 4578, 4708
Esp3I CGTCTC 1 cut(s) 113
FalI AAGNNNNNCTT 6 cut(s) 1354, 1386, 1483, 1515, 4301, 4333
FaqI GGGAC 4 cut(s) 212, 366, 4040, 4270
FauI CCCGC 3 cut(s) 1311, 4749, 5210
FauNDI CATATG 3 cut(s) 839, 1332, 3355
FbaI TGATCA 1 cut(s) 4819
FblI GTMKAC 3 cut(s) 2634, 4048, 4303
FriOI GRGCYC 2 cut(s) 1343, 3969
FspAI RTGCGCAY 1 cut(s) 1327
FspBI CTAG 8 cut(s) 689, 2811, 3339, 3345, 3947, 4251, 4365, 4704
FspI TGCGCA 1 cut(s) 1327
GlaI GCGC 6 cut(s) 671, 908, 1181, 1327, 4450, 4898
GsaI CCCAGC 1 cut(s) 328
GsuI CTGGAG 4 cut(s) 64, 239, 864, 4392
HaeII RGCGCY 2 cut(s) 910, 4452
HapII CCGG 2 cut(s) 632, 1609
HhaI GCGC 6 cut(s) 672, 909, 1182, 1328, 4451, 4899
Hin6I GCGC 6 cut(s) 670, 907, 1180, 1326, 4449, 4897
HinP1I GCGC 6 cut(s) 670, 907, 1180, 1326, 4449, 4897
HincII GTYRAC 5 cut(s) 589, 792, 1926, 2383, 4331
HindII GTYRAC 5 cut(s) 589, 792, 1926, 2383, 4331
HindIII AAGCTT 4 cut(s) 1016, 1149, 2002, 3605
HpaI GTTAAC 1 cut(s) 1926
HpaII CCGG 2 cut(s) 632, 1609
HphI GGTGA 8 cut(s) 2009, 2364, 2928, 3000, 3052, 3471, 3528, 3723
Hpy99I CGWCG 1 cut(s) 80
HpyCH4IV ACGT 6 cut(s) 1979, 2260, 3694, 4082, 4087, 4948
HpySE526I ACGT 6 cut(s) 1979, 2260, 3694, 4082, 4087, 4948
HspAI GCGC 6 cut(s) 670, 907, 1180, 1326, 4449, 4897
Ksp22I TGATCA 1 cut(s) 4819
KspAI GTTAAC 1 cut(s) 1926
LmnI GCTCC 5 cut(s) 826, 1984, 2887, 3397, 3511
MaeI CTAG 8 cut(s) 689, 2811, 3339, 3345, 3947, 4251, 4365, 4704
MaeII ACGT 6 cut(s) 1979, 2260, 3694, 4082, 4087, 4948
MfeI CAATTG 2 cut(s) 3069, 4431
MflI RGATCY 9 cut(s) 2023, 2517, 2911, 3172, 3221, 4270, 4480, 4969, 5095
MhlI GDGCHC 7 cut(s) 1343, 1717, 3190, 3969, 4653, 4663, 5245
MlsI TGGCCA 3 cut(s) 3558, 4439, 4583
MluNI TGGCCA 3 cut(s) 3558, 4439, 4583
MlyI GAGTC 5 cut(s) 57, 557, 2200, 3052, 3455
MmeI TCCRAC 4 cut(s) 15, 804, 826, 2200
Mox20I TGGCCA 3 cut(s) 3558, 4439, 4583
Mph1103I ATGCAT 3 cut(s) 145, 600, 646
MroXI GAANNNNTTC 2 cut(s) 3590, 4494
MscI TGGCCA 3 cut(s) 3558, 4439, 4583
MslI CAYNNNNRTG 7 cut(s) 838, 945, 1211, 1333, 1637, 2110, 2964
Msp20I TGGCCA 3 cut(s) 3558, 4439, 4583
MspA1I CMGCKG 1 cut(s) 42
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 2 cut(s) 632, 1609
MspR9I CCNGG 8 cut(s) 633, 1609, 1610, 1780, 2063, 3555, 4410, 4541
MunI CAATTG 2 cut(s) 3069, 4431
Mva1269I GAATGC 5 cut(s) 1328, 1632, 1876, 2368, 4771
MvaI CCWGG 5 cut(s) 1780, 2063, 3555, 4410, 4541
NciI CCSGG 3 cut(s) 633, 1609, 1610
NdeI CATATG 3 cut(s) 839, 1332, 3355
NmuCI GTSAC 6 cut(s) 421, 1744, 2570, 2772, 3477, 4083
NsbI TGCGCA 1 cut(s) 1327
NsiI ATGCAT 3 cut(s) 145, 600, 646
NspI RCATGY 6 cut(s) 598, 1498, 2162, 2571, 4136, 5032
OliI CACNNNNGTG 1 cut(s) 1333
PaeI GCATGC 2 cut(s) 598, 4136
PaeR7I CTCGAG 2 cut(s) 19, 3579
PagI TCATGA 2 cut(s) 3985, 4498
PaqCI CACCTGC 1 cut(s) 2436
PceI AGGCCT 2 cut(s) 3158, 3553
PciI ACATGT 2 cut(s) 2567, 5028
PcsI WCGNNNNNNNCGW 1 cut(s) 75
PctI GAATGC 5 cut(s) 1328, 1632, 1876, 2368, 4771
PdmI GAANNNNTTC 2 cut(s) 3590, 4494
PflMI CCANNNNNTGG 2 cut(s) 1748, 4415
PfoI TCCNGGA 1 cut(s) 2061
Ple19I CGATCG 2 cut(s) 82, 4924
PleI GAGTC 5 cut(s) 56, 556, 2200, 3051, 3454
PmaCI CACGTG 1 cut(s) 2261
PmlI CACGTG 1 cut(s) 2261
PpsI GAGTC 5 cut(s) 56, 556, 2200, 3051, 3454
Ppu21I YACGTR 1 cut(s) 2261
PpuMI RGGWCCY 1 cut(s) 4403
PscI ACATGT 2 cut(s) 2567, 5028
PshBI ATTAAT 1 cut(s) 2487
PsiI TTATAA 4 cut(s) 231, 2409, 5007, 5091
Psp5II RGGWCCY 1 cut(s) 4403
Psp6I CCWGG 5 cut(s) 1778, 2061, 3553, 4408, 4539
PspCI CACGTG 1 cut(s) 2261
PspFI CCCAGC 1 cut(s) 324
PspGI CCWGG 5 cut(s) 1778, 2061, 3553, 4408, 4539
PspOMI GGGCCC 1 cut(s) 1339
PspPI GGNCC 9 cut(s) 37, 209, 380, 810, 1339, 1340, 1762, 2173, 4403
PspPPI RGGWCCY 1 cut(s) 4403
PspXI VCTCGAGB 1 cut(s) 3579
PsrI GAACNNNNNNTAC 2 cut(s) 3355, 3387
PstI CTGCAG 3 cut(s) 1140, 1801, 2447
PstNI CAGNNNCTG 6 cut(s) 1748, 1779, 2209, 2282, 4415, 4484
PsuI RGATCY 9 cut(s) 2023, 2517, 2911, 3172, 3221, 4270, 4480, 4969, 5095
PvuI CGATCG 2 cut(s) 82, 4924
RsaI GTAC 7 cut(s) 832, 933, 2505, 3343, 3364, 4081, 4414
RsaNI GTAC 7 cut(s) 831, 932, 2504, 3342, 3363, 4080, 4413
RseI CAYNNNNRTG 7 cut(s) 838, 945, 1211, 1333, 1637, 2110, 2964
Sau96I GGNCC 9 cut(s) 37, 209, 380, 810, 1339, 1340, 1762, 2173, 4403
ScaI AGTACT 1 cut(s) 3343
SchI GAGTC 5 cut(s) 57, 557, 2200, 3052, 3455
ScrFI CCNGG 8 cut(s) 633, 1609, 1610, 1780, 2063, 3555, 4410, 4541
SduI GDGCHC 7 cut(s) 1343, 1717, 3190, 3969, 4653, 4663, 5245
SfcI CTRYAG 7 cut(s) 1136, 1797, 2443, 3177, 3225, 4623, 4992
Sfr274I CTCGAG 2 cut(s) 19, 3579
SinI GGWCC 4 cut(s) 37, 380, 2173, 4403
SlaI CTCGAG 2 cut(s) 19, 3579
SmaI CCCGGG 1 cut(s) 1610
SmiMI CAYNNNNRTG 7 cut(s) 838, 945, 1211, 1333, 1637, 2110, 2964
SmlI CTYRAG 8 cut(s) 19, 749, 985, 2152, 2513, 3579, 4636, 5324
SmoI CTYRAG 8 cut(s) 19, 749, 985, 2152, 2513, 3579, 4636, 5324
SpeI ACTAGT 2 cut(s) 3338, 3344
SphI GCATGC 2 cut(s) 598, 4136
SseBI AGGCCT 2 cut(s) 3158, 3553
SspMI CTAG 8 cut(s) 689, 2811, 3339, 3345, 3947, 4251, 4365, 4704
StuI AGGCCT 2 cut(s) 3158, 3553
StyD4I CCNGG 8 cut(s) 631, 1607, 1608, 1778, 2061, 3553, 4408, 4539
StyI CCWWGG 7 cut(s) 1698, 1988, 2314, 3441, 4364, 4578, 4708
TaiI ACGT 6 cut(s) 1982, 2263, 3697, 4085, 4090, 4951
TaqII GACCGA 1 cut(s) 2840
TatI WGTACW 2 cut(s) 931, 3341
TauI GCSGC 2 cut(s) 304, 3601
TseFI GTSAC 6 cut(s) 421, 1744, 2570, 2772, 3477, 4083
Tsp45I GTSAC 6 cut(s) 421, 1744, 2570, 2772, 3477, 4083
TspGWI ACGGA 1 cut(s) 2612
TspMI CCCGGG 1 cut(s) 1608
Van91I CCANNNNNTGG 2 cut(s) 1748, 4415
Vha464I CTTAAG 1 cut(s) 749
VpaK11BI GGWCC 4 cut(s) 37, 380, 2173, 4403
VspI ATTAAT 1 cut(s) 2487
XagI CCTNNNNNAGG 3 cut(s) 1208, 2066, 4397
XceI RCATGY 6 cut(s) 598, 1498, 2162, 2571, 4136, 5032
XcmI CCANNNNNNNNNTGG 2 cut(s) 820, 4715
XhoI CTCGAG 2 cut(s) 19, 3579
XmaI CCCGGG 1 cut(s) 1608
XmaJI CCTAGG 1 cut(s) 4364
XmiI GTMKAC 3 cut(s) 2634, 4048, 4303
XmnI GAANNNNTTC 2 cut(s) 3590, 4494
XspI CTAG 8 cut(s) 689, 2811, 3339, 3345, 3947, 4251, 4365, 4704
ZrmI AGTACT 1 cut(s) 3343
Zsp2I ATGCAT 3 cut(s) 145, 600, 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.