AAA domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16800 AT1G16800 AT1G16800 |
| fragaria_vesca | FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 FvH4_6g36870 |
| malus_domestica | MD17G1161500.v1.1 |
| prunus_persica | Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 Prupe.3G023800_v2.0.a1 |
| pyrus_communis | pycom17g15460 |
| rosa_chinensis | RchiOBHm_Chr2g0149261 |
| rosa_laevigata | RLG00000020388 |
| rosa_multiflora | Rmu_co8056652.1_g000001 Rmu_co8113988.1_g000001 Rmu_sc0001615.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00098260 |
| rosa_rugosa | Rorug02G0410000 |
| rosa_samantha | Rh2AG470900 Rh2BG483100 Rh2CG456800 Rh2DG492100 |
| rosa_wichuraiana | Rw2G038300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 267, 3884 |
| AarI | CACCTGC | 1 cut(s) | 4637 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1094 |
| Acc36I | ACCTGC | 2 cut(s) | 3088, 4637 |
| Acc65I | GGTACC | 2 cut(s) | 2162, 3507 |
| AccB1I | GGYRCC | 2 cut(s) | 2162, 3507 |
| AccI | GTMKAC | 2 cut(s) | 90, 2670 |
| AciI | CCGC | 4 cut(s) | 214, 668, 2908, 3412 |
| AclI | AACGTT | 2 cut(s) | 2575, 3217 |
| AclWI | GGATC | 8 cut(s) | 44, 644, 657, 1184, 2847, 3137, 3610, 3970 |
| AcoI | YGGCCR | 4 cut(s) | 1309, 2187, 3232, 4165 |
| AcuI | CTGAAG | 5 cut(s) | 609, 756, 2069, 2078, 3083 |
| AcyI | GRCGYC | 1 cut(s) | 1222 |
| AfaI | GTAC | 7 cut(s) | 1072, 1831, 2164, 2355, 3509, 3908, 4234 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 153, 574, 2044, 2165, 3655, 3841 |
| AflII | CTTAAG | 2 cut(s) | 2707, 2729 |
| AflIII | ACRYGT | 3 cut(s) | 416, 2747, 4213 |
| AgeI | ACCGGT | 1 cut(s) | 2165 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 2731, 3337, 3372 |
| AjnI | CCWGG | 6 cut(s) | 275, 2043, 2158, 2289, 3072, 3715 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 12, 44, 1479, 1511, 4250, 4282 |
| Alw21I | GWGCWC | 1 cut(s) | 2413 |
| Alw26I | GTCTC | 8 cut(s) | 526, 988, 1261, 1770, 2961, 3359, 3564, 4600 |
| AlwI | GGATC | 8 cut(s) | 44, 644, 657, 1184, 2847, 3137, 3610, 3970 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 134 |
| Ama87I | CYCGRG | 1 cut(s) | 221 |
| AoxI | GGCC | 8 cut(s) | 140, 592, 928, 1309, 2187, 2461, 3232, 4165 |
| AseI | ATTAAT | 2 cut(s) | 183, 2874 |
| AsiGI | ACCGGT | 1 cut(s) | 2165 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2129, 3724 |
| Asp718I | GGTACC | 2 cut(s) | 2162, 3507 |
| AspLEI | GCGC | 2 cut(s) | 1154, 4050 |
| AspS9I | GGNCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| AsuHPI | GGTGA | 9 cut(s) | 379, 1473, 1622, 3152, 4103, 4160, 4238, 4361, 4421 |
| AsuII | TTCGAA | 1 cut(s) | 2261 |
| AvaI | CYCGRG | 1 cut(s) | 221 |
| AvaII | GGWCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2550, 2583 |
| BalI | TGGCCA | 4 cut(s) | 1311, 2189, 3234, 4167 |
| BamHI | GGATCC | 1 cut(s) | 649 |
| BanI | GGYRCC | 2 cut(s) | 2162, 3507 |
| BanII | GRGCYC | 1 cut(s) | 1719 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 729, 761 |
| BauI | CACGAG | 1 cut(s) | 867 |
| BbsI | GAAGAC | 4 cut(s) | 1557, 2055, 2625, 4084 |
| Bbv12I | GWGCWC | 1 cut(s) | 2413 |
| BceAI | ACGGC | 1 cut(s) | 4158 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1871, 1905 |
| BciT130I | CCWGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| BciVI | GTATCC | 1 cut(s) | 2551 |
| BclI | TGATCA | 2 cut(s) | 990, 2569 |
| BcoDI | GTCTC | 8 cut(s) | 526, 988, 1261, 1770, 2961, 3359, 3564, 4600 |
| BfmI | CTRYAG | 5 cut(s) | 915, 1665, 2373, 3474, 4644 |
| BfoI | RGCGCY | 1 cut(s) | 1155 |
| BfrI | CTTAAG | 2 cut(s) | 2707, 2729 |
| BfuAI | ACCTGC | 2 cut(s) | 3088, 4637 |
| BfuI | GTATCC | 1 cut(s) | 2551 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1354 |
| BglII | AGATCT | 2 cut(s) | 2020, 4127 |
| Bme1390I | CCNGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| Bme18I | GGWCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 2731, 3337, 3372 |
| BmeT110I | CYCGRG | 1 cut(s) | 221 |
| BmgT120I | GGNCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| BmrFI | CCNGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| BmrI | ACTGGG | 2 cut(s) | 113, 3850 |
| BmuI | ACTGGG | 2 cut(s) | 113, 3850 |
| BoxI | GACNNNNGTC | 2 cut(s) | 209, 3282 |
| BpiI | GAAGAC | 4 cut(s) | 1557, 2055, 2625, 4084 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3774, 3806 |
| BpmI | CTGGAG | 4 cut(s) | 2066, 2142, 3390, 3911 |
| Bpu14I | TTCGAA | 1 cut(s) | 2261 |
| BpuEI | CTTGAG | 4 cut(s) | 623, 3051, 3473, 4488 |
| Bsa29I | ATCGAT | 1 cut(s) | 4012 |
| BsaHI | GRCGYC | 1 cut(s) | 1222 |
| BsaI | GGTCTC | 2 cut(s) | 2961, 4600 |
| BsaWI | WCCGGW | 1 cut(s) | 2165 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 153, 574, 2044, 2165, 3655, 3841 |
| Bse118I | RCCGGY | 2 cut(s) | 55, 2165 |
| Bse3DI | GCAATG | 2 cut(s) | 2201, 4206 |
| BseBI | CCWGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| BseCI | ATCGAT | 1 cut(s) | 4012 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 153, 574, 2044, 2165, 3655, 3841 |
| BseMI | GCAATG | 2 cut(s) | 2201, 4206 |
| BseMII | CTCAG | 7 cut(s) | 953, 1227, 1814, 2015, 2857, 4004, 4079 |
| BseRI | GAGGAG | 3 cut(s) | 503, 2205, 4359 |
| BsgI | GTGCAG | 3 cut(s) | 3223, 3696, 4038 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2674 |
| BshFI | GGCC | 8 cut(s) | 142, 594, 930, 1311, 2189, 2463, 3234, 4167 |
| BshNI | GGYRCC | 2 cut(s) | 2162, 3507 |
| BshTI | ACCGGT | 1 cut(s) | 2165 |
| BshVI | ATCGAT | 1 cut(s) | 4012 |
| BsiEI | CGRYCG | 1 cut(s) | 2674 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2413 |
| BsiHKCI | CYCGRG | 1 cut(s) | 221 |
| BsiSI | CCGG | 2 cut(s) | 56, 2166 |
| BslFI | GGGAC | 5 cut(s) | 427, 650, 1120, 2020, 3430 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 153, 574, 2044, 2165, 3655, 3841 |
| BsmAI | GTCTC | 8 cut(s) | 526, 988, 1261, 1770, 2961, 3359, 3564, 4600 |
| BsmFI | GGGAC | 5 cut(s) | 427, 650, 1120, 2020, 3430 |
| BsmI | GAATGC | 1 cut(s) | 2792 |
| BsnI | GGCC | 8 cut(s) | 142, 594, 930, 1311, 2189, 2463, 3234, 4167 |
| Bso31I | GGTCTC | 2 cut(s) | 2961, 4600 |
| BsoBI | CYCGRG | 1 cut(s) | 221 |
| Bsp119I | TTCGAA | 1 cut(s) | 2261 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1719, 2413 |
| Bsp1407I | TGTACA | 1 cut(s) | 2353 |
| Bsp19I | CCATGG | 3 cut(s) | 483, 678, 2458 |
| BspACI | CCGC | 4 cut(s) | 214, 668, 2908, 3412 |
| BspANI | GGCC | 8 cut(s) | 142, 594, 930, 1311, 2189, 2463, 3234, 4167 |
| BspCNI | CTCAG | 7 cut(s) | 952, 1226, 1815, 2016, 2856, 4003, 4078 |
| BspDI | ATCGAT | 1 cut(s) | 4012 |
| BspHI | TCATGA | 3 cut(s) | 322, 1648, 3361 |
| BspMAI | CTGCAG | 2 cut(s) | 3478, 4648 |
| BspMI | ACCTGC | 2 cut(s) | 3088, 4637 |
| BspPI | GGATC | 8 cut(s) | 44, 644, 657, 1184, 2847, 3137, 3610, 3970 |
| BspT104I | TTCGAA | 1 cut(s) | 2261 |
| BspT107I | GGYRCC | 2 cut(s) | 2162, 3507 |
| BspTI | CTTAAG | 2 cut(s) | 2707, 2729 |
| BspTNI | GGTCTC | 2 cut(s) | 2961, 4600 |
| BsrDI | GCAATG | 2 cut(s) | 2201, 4206 |
| BsrFI | RCCGGY | 2 cut(s) | 55, 2165 |
| BsrGI | TGTACA | 1 cut(s) | 2353 |
| BssAI | RCCGGY | 2 cut(s) | 55, 2165 |
| BssNI | GRCGYC | 1 cut(s) | 1222 |
| BssSI | CACGAG | 1 cut(s) | 867 |
| BssT1I | CCWWGG | 9 cut(s) | 19, 483, 678, 882, 1352, 2328, 2458, 3649, 4182 |
| Bst2BI | CACGAG | 1 cut(s) | 867 |
| Bst2UI | CCWGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| Bst6I | CTCTTC | 3 cut(s) | 679, 1569, 3102 |
| BstACI | GRCGYC | 1 cut(s) | 1222 |
| BstAFI | CTTAAG | 2 cut(s) | 2707, 2729 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2207 |
| BstAUI | TGTACA | 1 cut(s) | 2353 |
| BstBI | TTCGAA | 1 cut(s) | 2261 |
| BstC8I | GCNNGC | 8 cut(s) | 1123, 1226, 1309, 1884, 2208, 3232, 3996, 4617 |
| BstDSI | CCRYGG | 3 cut(s) | 483, 678, 2458 |
| BstH2I | RGCGCY | 1 cut(s) | 1155 |
| BstHHI | GCGC | 2 cut(s) | 1154, 4050 |
| BstMAI | GTCTC | 8 cut(s) | 526, 988, 1261, 1770, 2961, 3359, 3564, 4600 |
| BstMCI | CGRYCG | 1 cut(s) | 2674 |
| BstNI | CCWGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| BstNSI | RCATGY | 6 cut(s) | 420, 1886, 2751, 3211, 3998, 4217 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 209, 3282 |
| BstSCI | CCNGG | 6 cut(s) | 275, 2043, 2158, 2289, 3072, 3715 |
| BstSFI | CTRYAG | 5 cut(s) | 915, 1665, 2373, 3474, 4644 |
| BstV2I | GAAGAC | 4 cut(s) | 1557, 2055, 2625, 4084 |
| BstX2I | RGATCY | 7 cut(s) | 649, 1189, 2020, 2839, 3602, 3975, 4127 |
| BstYI | RGATCY | 7 cut(s) | 649, 1189, 2020, 2839, 3602, 3975, 4127 |
| Bsu15I | ATCGAT | 1 cut(s) | 4012 |
| BsuI | GTATCC | 1 cut(s) | 2551 |
| BsuRI | GGCC | 8 cut(s) | 142, 594, 930, 1311, 2189, 2463, 3234, 4167 |
| BsuTUI | ATCGAT | 1 cut(s) | 4012 |
| BtgI | CCRYGG | 3 cut(s) | 483, 678, 2458 |
| BtsI | GCAGTG | 1 cut(s) | 2642 |
| BtsIMutI | CAGTG | 9 cut(s) | 76, 196, 430, 813, 1400, 1605, 2203, 2642, 3681 |
| BveI | ACCTGC | 2 cut(s) | 3088, 4637 |
| Cac8I | GCNNGC | 8 cut(s) | 1123, 1226, 1309, 1884, 2208, 3232, 3996, 4617 |
| CaiI | CAGNNNCTG | 1 cut(s) | 134 |
| CciI | TCATGA | 3 cut(s) | 322, 1648, 3361 |
| CfoI | GCGC | 2 cut(s) | 1154, 4050 |
| Cfr10I | RCCGGY | 2 cut(s) | 55, 2165 |
| Cfr13I | GGNCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| ClaI | ATCGAT | 1 cut(s) | 4012 |
| CseI | GACGC | 2 cut(s) | 1230, 1404 |
| Csp6I | GTAC | 7 cut(s) | 1071, 1830, 2163, 2354, 3508, 3907, 4233 |
| CspAI | ACCGGT | 1 cut(s) | 2165 |
| CviQI | GTAC | 7 cut(s) | 1071, 1830, 2163, 2354, 3508, 3907, 4233 |
| DraI | TTTAAA | 4 cut(s) | 1060, 1531, 3108, 3499 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1094 |
| DriI | GACNNNNNGTC | 3 cut(s) | 2731, 3337, 3372 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1094 |
| EaeI | YGGCCR | 4 cut(s) | 1309, 2187, 3232, 4165 |
| Eam1104I | CTCTTC | 3 cut(s) | 679, 1569, 3102 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 2731, 3337, 3372 |
| EarI | CTCTTC | 3 cut(s) | 679, 1569, 3102 |
| Eco130I | CCWWGG | 9 cut(s) | 19, 483, 678, 882, 1352, 2328, 2458, 3649, 4182 |
| Eco147I | AGGCCT | 1 cut(s) | 594 |
| Eco24I | GRGCYC | 1 cut(s) | 1719 |
| Eco31I | GGTCTC | 2 cut(s) | 2961, 4600 |
| Eco32I | GATATC | 1 cut(s) | 1951 |
| Eco47I | GGWCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| Eco57I | CTGAAG | 5 cut(s) | 609, 756, 2069, 2078, 3083 |
| Eco88I | CYCGRG | 1 cut(s) | 221 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2153, 2398, 4055 |
| EcoRI | GAATTC | 1 cut(s) | 3430 |
| EcoRII | CCWGG | 6 cut(s) | 275, 2043, 2158, 2289, 3072, 3715 |
| EcoRV | GATATC | 1 cut(s) | 1951 |
| EcoT14I | CCWWGG | 9 cut(s) | 19, 483, 678, 882, 1352, 2328, 2458, 3649, 4182 |
| EcoT22I | ATGCAT | 1 cut(s) | 3303 |
| EcoT38I | GRGCYC | 1 cut(s) | 1719 |
| ErhI | CCWWGG | 9 cut(s) | 19, 483, 678, 882, 1352, 2328, 2458, 3649, 4182 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 30 |
| FaqI | GGGAC | 5 cut(s) | 427, 650, 1120, 2020, 3430 |
| FauI | CCCGC | 2 cut(s) | 675, 3405 |
| FauNDI | CATATG | 3 cut(s) | 1746, 2405, 3281 |
| FbaI | TGATCA | 2 cut(s) | 990, 2569 |
| FblI | GTMKAC | 2 cut(s) | 90, 2670 |
| FriOI | GRGCYC | 1 cut(s) | 1719 |
| GlaI | GCGC | 2 cut(s) | 1153, 4049 |
| GsuI | CTGGAG | 4 cut(s) | 2066, 2142, 3390, 3911 |
| HaeII | RGCGCY | 1 cut(s) | 1155 |
| HaeIII | GGCC | 8 cut(s) | 142, 594, 930, 1311, 2189, 2463, 3234, 4167 |
| HapII | CCGG | 2 cut(s) | 56, 2166 |
| HgaI | GACGC | 2 cut(s) | 1230, 1404 |
| HhaI | GCGC | 2 cut(s) | 1154, 4050 |
| Hin1I | GRCGYC | 1 cut(s) | 1222 |
| Hin6I | GCGC | 2 cut(s) | 1152, 4048 |
| HinP1I | GCGC | 2 cut(s) | 1152, 4048 |
| HincII | GTYRAC | 4 cut(s) | 874, 2081, 2671, 3114 |
| HindII | GTYRAC | 4 cut(s) | 874, 2081, 2671, 3114 |
| HindIII | AAGCTT | 4 cut(s) | 174, 537, 860, 1119 |
| HpaII | CCGG | 2 cut(s) | 56, 2166 |
| HphI | GGTGA | 9 cut(s) | 379, 1473, 1622, 3152, 4103, 4160, 4238, 4361, 4421 |
| Hpy166II | GTNNAC | 8 cut(s) | 91, 874, 2081, 2671, 3114, 3221, 3909, 4160 |
| Hpy8I | GTNNAC | 8 cut(s) | 91, 874, 2081, 2671, 3114, 3221, 3909, 4160 |
| Hpy99I | CGWCG | 2 cut(s) | 442, 3335 |
| HpyCH4IV | ACGT | 4 cut(s) | 1870, 2575, 2698, 3217 |
| HpySE526I | ACGT | 4 cut(s) | 1870, 2575, 2698, 3217 |
| Hsp92I | GRCGYC | 1 cut(s) | 1222 |
| HspAI | GCGC | 2 cut(s) | 1152, 4048 |
| KpnI | GGTACC | 2 cut(s) | 2166, 3511 |
| Ksp22I | TGATCA | 2 cut(s) | 990, 2569 |
| LmnI | GCTCC | 6 cut(s) | 516, 1264, 2047, 2547, 3415, 4444 |
| MaeII | ACGT | 4 cut(s) | 1870, 2575, 2698, 3217 |
| MaeIII | GTNAC | 9 cut(s) | 116, 305, 419, 470, 1539, 2101, 2941, 4070, 4138 |
| MfeI | CAATTG | 2 cut(s) | 2562, 2637 |
| MflI | RGATCY | 7 cut(s) | 649, 1189, 2020, 2839, 3602, 3975, 4127 |
| MhlI | GDGCHC | 2 cut(s) | 1719, 2413 |
| MlsI | TGGCCA | 4 cut(s) | 1311, 2189, 3234, 4167 |
| MluNI | TGGCCA | 4 cut(s) | 1311, 2189, 3234, 4167 |
| MlyI | GAGTC | 8 cut(s) | 86, 790, 1123, 1193, 1991, 2639, 3965, 4388 |
| MmeI | TCCRAC | 4 cut(s) | 1305, 1477, 1500, 2491 |
| Mox20I | TGGCCA | 4 cut(s) | 1311, 2189, 3234, 4167 |
| Mph1103I | ATGCAT | 1 cut(s) | 3303 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2129, 3724 |
| MscI | TGGCCA | 4 cut(s) | 1311, 2189, 3234, 4167 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2116, 3306, 4089 |
| Msp20I | TGGCCA | 4 cut(s) | 1311, 2189, 3234, 4167 |
| MspCI | CTTAAG | 2 cut(s) | 2707, 2729 |
| MspI | CCGG | 2 cut(s) | 56, 2166 |
| MspR9I | CCNGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| MunI | CAATTG | 2 cut(s) | 2562, 2637 |
| Mva1269I | GAATGC | 1 cut(s) | 2792 |
| MvaI | CCWGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| NcoI | CCATGG | 3 cut(s) | 483, 678, 2458 |
| NdeI | CATATG | 3 cut(s) | 1746, 2405, 3281 |
| NmeAIII | GCCGAG | 1 cut(s) | 4541 |
| NmuCI | GTSAC | 2 cut(s) | 305, 470 |
| NsiI | ATGCAT | 1 cut(s) | 3303 |
| NspI | RCATGY | 6 cut(s) | 420, 1886, 2751, 3211, 3998, 4217 |
| NspV | TTCGAA | 1 cut(s) | 2261 |
| PaeI | GCATGC | 2 cut(s) | 1886, 3998 |
| PaeR7I | CTCGAG | 1 cut(s) | 221 |
| PagI | TCATGA | 3 cut(s) | 322, 1648, 3361 |
| PaqCI | CACCTGC | 1 cut(s) | 4637 |
| PceI | AGGCCT | 1 cut(s) | 594 |
| PciI | ACATGT | 3 cut(s) | 416, 2747, 4213 |
| PctI | GAATGC | 1 cut(s) | 2792 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2129, 3724 |
| PfoI | TCCNGGA | 1 cut(s) | 275 |
| PinAI | ACCGGT | 1 cut(s) | 2165 |
| PleI | GAGTC | 8 cut(s) | 86, 789, 1122, 1193, 1991, 2638, 3964, 4387 |
| PpsI | GAGTC | 8 cut(s) | 86, 789, 1122, 1193, 1991, 2638, 3964, 4387 |
| PpuMI | RGGWCCY | 3 cut(s) | 2153, 2398, 4055 |
| PscI | ACATGT | 3 cut(s) | 416, 2747, 4213 |
| PshAI | GACNNNNGTC | 2 cut(s) | 209, 3282 |
| PshBI | ATTAAT | 2 cut(s) | 183, 2874 |
| PsiI | TTATAA | 2 cut(s) | 267, 3884 |
| Psp1406I | AACGTT | 2 cut(s) | 2575, 3217 |
| Psp5II | RGGWCCY | 3 cut(s) | 2153, 2398, 4055 |
| Psp6I | CCWGG | 6 cut(s) | 275, 2043, 2158, 2289, 3072, 3715 |
| PspGI | CCWGG | 6 cut(s) | 275, 2043, 2158, 2289, 3072, 3715 |
| PspPI | GGNCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| PspPPI | RGGWCCY | 3 cut(s) | 2153, 2398, 4055 |
| PstI | CTGCAG | 2 cut(s) | 3478, 4648 |
| PstNI | CAGNNNCTG | 1 cut(s) | 134 |
| PsuI | RGATCY | 7 cut(s) | 649, 1189, 2020, 2839, 3602, 3975, 4127 |
| RsaI | GTAC | 7 cut(s) | 1072, 1831, 2164, 2355, 3509, 3908, 4234 |
| RsaNI | GTAC | 7 cut(s) | 1071, 1830, 2163, 2354, 3508, 3907, 4233 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2116, 3306, 4089 |
| SalI | GTCGAC | 1 cut(s) | 2669 |
| Sau96I | GGNCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| SchI | GAGTC | 8 cut(s) | 86, 790, 1123, 1193, 1991, 2639, 3965, 4388 |
| ScrFI | CCNGG | 6 cut(s) | 277, 2045, 2160, 2291, 3074, 3717 |
| SduI | GDGCHC | 2 cut(s) | 1719, 2413 |
| SfcI | CTRYAG | 5 cut(s) | 915, 1665, 2373, 3474, 4644 |
| Sfr274I | CTCGAG | 1 cut(s) | 221 |
| SfuI | TTCGAA | 1 cut(s) | 2261 |
| SinI | GGWCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| SlaI | CTCGAG | 1 cut(s) | 221 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2116, 3306, 4089 |
| SmlI | CTYRAG | 7 cut(s) | 221, 602, 2707, 2729, 3066, 3488, 4503 |
| SmoI | CTYRAG | 7 cut(s) | 221, 602, 2707, 2729, 3066, 3488, 4503 |
| SphI | GCATGC | 2 cut(s) | 1886, 3998 |
| SseBI | AGGCCT | 1 cut(s) | 594 |
| SsiI | CCGC | 4 cut(s) | 214, 668, 2908, 3412 |
| StuI | AGGCCT | 1 cut(s) | 594 |
| StyD4I | CCNGG | 6 cut(s) | 275, 2043, 2158, 2289, 3072, 3715 |
| StyI | CCWWGG | 9 cut(s) | 19, 483, 678, 882, 1352, 2328, 2458, 3649, 4182 |
| TaiI | ACGT | 4 cut(s) | 1873, 2578, 2701, 3220 |
| TatI | WGTACW | 3 cut(s) | 2353, 3906, 4232 |
| TscAI | CASTG | 9 cut(s) | 76, 196, 430, 813, 1407, 1605, 2203, 2649, 3688 |
| TseFI | GTSAC | 2 cut(s) | 305, 470 |
| Tsp45I | GTSAC | 2 cut(s) | 305, 470 |
| TspGWI | ACGGA | 3 cut(s) | 69, 607, 4145 |
| TspRI | CASTG | 9 cut(s) | 76, 196, 430, 813, 1407, 1605, 2203, 2649, 3688 |
| Vha464I | CTTAAG | 2 cut(s) | 2707, 2729 |
| VpaK11BI | GGWCC | 4 cut(s) | 2153, 2398, 3380, 4055 |
| VspI | ATTAAT | 2 cut(s) | 183, 2874 |
| XbaI | TCTAGA | 2 cut(s) | 1555, 2656 |
| XceI | RCATGY | 6 cut(s) | 420, 1886, 2751, 3211, 3998, 4217 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 2465, 3130, 3935 |
| XhoI | CTCGAG | 1 cut(s) | 221 |
| XmiI | GTMKAC | 2 cut(s) | 90, 2670 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2129, 3724 |
| Zsp2I | ATGCAT | 1 cut(s) | 3303 |