AT1G17440

Transcription initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0010142
Physical Location & Seq
Reverse (-)
5983984 .. 5987934
3951 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G17440.1

Sequence Viewer

Length: 2052 bp
ATGGCGGAACCGATTCCCTCATCGTCTCTGTCACCGAAATCTCTACAATCTCCTAATCCTATGGAACCTTCTCCTGCATCTTCTACTCCTTTACCTTCATCATCATCTCAACAACAACAACTCATGACAGCTCCGATTTCCAATTCTGTTAATTCCGCTGCGTCTCCGGCGATGACTGTAACTACCACCGAAGGTATTGTAATTCAGAACAATTCGCAACCTAACATCTCCTCTCCCAACCCTACTTCTTCTAACCCACCAATCGGAGCTCAGATCCCGTCGCCTTCTCCTCTCTCTCACCCTTCTTCATCTTTAGATCAGCAAACACAGACTCAGCAACTCGTTCAACAAACTCAGCAATTGCCTCAACAACAACAACAGATTATGCAGCAAATCTCTTCATCTCCGATTCCACAATTATCGCCGCAACAGCAACAGATTCTGCAGCAACAACACATGACTTCACAGCAAATCCCAATGTCGAGTTACCAAATTGCTCAATCTCTTCAGCGATCCCCTTCTCTTTCTCGCCTGAGCCAAATTCAGCAACAACAGCAGCAGCAGCATCAAGGTCAATACGGCAACGTGTTGAGACAGCAAGCTGGTTTGTACGGAACCATGAACTTTGGTGGCTCAGGTTCAGTTCAACAGAGCCAGCAGAATCAGCAGATGGTTAACCCTAATATGTCCAGAGCAGGTTTAGTTGGCCAAAGCGGTCACTTGCCTATGCTTAACGGTGCTGCTGGAGCTGCTCAGATGAATATTCAACCCCAATTATTGGCTGCTTCGCCGAGGCAGAAATCTGGCATGGTTCAAGGTTCGCAGTTTCATCCGGGAAGTTCTGGACAACAGTTACAAGGGATGCAAGCTATGGGAATGATGGGATCACTGAATTTGACCTCGCAAATGAGAGGTAACCCTGCTCTCTATGCGCAGCAGAGAATCAACCCGGGGCAGATGAGACAGCAATTGTCACAGCAAAACGCTCTTACTTCACCTCAGGTCCAGAACCTCCAGAGAACATCTTCTCTCGCATTTATGAATCCTCAGCTATCGGGTTTGGCCCAGAATGGACAAGCTGGCATGATGCAAAACTCTTTGTCACAGCAGCAATGGCTGAAGCAAATGTCGGGAATAACGAGCCCCAATTCATTCCGACTCCAACCGAGTCAAAGACAGGCTCTTCTCTTACAGCAGCAGCAGCAGCAACAACAACAACTGTCCTCTCCTCAGTTACATCAATCTTCTATGTCCTTGAATCAGCAGCAGATATCACAGATAATACAACAGCAGCAGCAACAATCACAATTAGGCCAGTCGCAGATGAACCAATCCCATTCCCAACAACAACTACAACAGATGCAGCAGCAACTACAGCAGCAACCACAACAGCAGATGCAGCAGCAGCAGCAACAACAACAGCAAATGCAGATTAATCAACAACAGCCATCTCCAAGGATGTTGAGTCATGCAGGACAAAAATCTGTCAGTTTAACGGGTTCACAACCAGAGGCTACACAATCGGGTACAACAACACCAGGTGGTAGCTCAAGCCAGGGAACAGAAGCAACAAACCAACTCCTTGGTAAAAGGAAGATACAGGATCTGGTTTCGCAGGTGGATGTACATGCGAAACTGGATCCTGATGTTGAAGACCTCCTTTTGGAGGTGGCAGATGACTTCATTGATTCGGTCACATCTTTTGCATGTAGCTTGGCTAAGCATCGTAAATCATCTGTATTGGAGCCCAAGGATATATTACTCCACCTAGAGAAAAACTTGCACTTGACAATTCCTGGATTCTCAAGTGAGGATAAACGTCAAACAAAAACTGTACCAACTGATCTCCACAAGAAGCGACTTGCAATGGTGCGTGCATTACTAGAATCCTCAAAACCAGAGACGAATGCAAGCAATTCCAAGGAAACTATGAGACAAGCGATGGTGAACCCAAATGGTCCGAATCATCTCTTAAGACCCTCCCAAAGTTCAGAACAATTGGTTTCGCAGACATCCGGTCCTCACATATTACAACACATGACACGATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000124 GO:0000125 GO:0000428 GO:0001085 GO:0001101 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010104 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010646 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0023051 GO:0023052 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032870 GO:0032991 GO:0033276 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070297 GO:0070461 GO:0070887 GO:0070897 GO:0071229 GO:0071310 GO:0071368 GO:0071395 GO:0071495 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902493 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1905368 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
TFIID_20kDa

Protein Analysis

683

Amino Acids

74.8

Weight (kDa)

9.84

Isoelectric Point (pI)

79.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIID_20kDa PF03847 529 - 596 6e-31 Transcription initiation factor TFIID subunit A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010142)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17440 AT1G17440
fragaria_vesca FvH4_6g34640 FvH4_6g34640
malus_domestica MD09G1184100.v1.1 MD17G1168400.v1.1
prunus_persica Prupe.3G042400_v2.0.a1
pyrus_communis pycom09g10180 pycom17g16450
rosa_chinensis RchiOBHm_Chr2g0145171
rosa_laevigata RLG00000020131
rosa_multiflora Rmu_sc0002506.1_g000036
rosa_roxburghii Rroxscaffold_2G00100820
rosa_rugosa Rorug02G0390800 Rorug02G0390800 Rorug02G0390900
rosa_samantha Rh2AG443500 Rh2BG454500 Rh2CG430500 Rh2DG464400
rosa_wichuraiana Rw2G036270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1606
Acc16I TGCGCA 1 cut(s) 933
Acc36I ACCTGC 2 cut(s) 686, 1606
AccB7I CCANNNNNTGG 1 cut(s) 778
AciI CCGC 4 cut(s) 5, 156, 425, 714
AclWI GGATC 6 cut(s) 268, 507, 892, 1611, 1634, 1647
AcoI YGGCCR 1 cut(s) 706
AcsI RAATTY 2 cut(s) 540, 892
AcuI CTGAAG 2 cut(s) 491, 1139
AdeI CACNNNGTG 1 cut(s) 1541
AfaI GTAC 4 cut(s) 611, 1528, 1626, 1836
AfiI CCNNNNNNNGG 4 cut(s) 263, 778, 1663, 1666
AflII CTTAAG 1 cut(s) 1972
AflIII ACRYGT 1 cut(s) 585
AgsI TTSAA 6 cut(s) 347, 647, 767, 815, 1258, 1652
AhdI GACNNNNNGTC 1 cut(s) 2016
AjnI CCWGG 3 cut(s) 1537, 1554, 1795
AluBI AGCT 9 cut(s) 131, 269, 602, 749, 869, 1051, 1079, 1548, 1713
AluI AGCT 9 cut(s) 131, 269, 602, 749, 869, 1051, 1079, 1548, 1713
Alw21I GWGCWC 1 cut(s) 271
Alw26I GTCTC 6 cut(s) 30, 168, 586, 955, 1895, 1927
AlwI GGATC 6 cut(s) 268, 507, 892, 1611, 1634, 1647
AlwNI CAGNNNCTG 2 cut(s) 442, 1606
Ama87I CYCGRG 1 cut(s) 949
AoxI GGCC 3 cut(s) 706, 1062, 1312
ApoI RAATTY 2 cut(s) 540, 892
AseI ATTAAT 1 cut(s) 1434
Asp700I GAANNNNTTC 2 cut(s) 12, 1024
AspLEI GCGC 1 cut(s) 934
AspS9I GGNCC 4 cut(s) 1003, 1063, 1958, 2018
AsuC2I CCSGG 3 cut(s) 834, 950, 951
AsuHPI GGTGA 4 cut(s) 24, 290, 987, 1957
AvaI CYCGRG 1 cut(s) 949
AvaII GGWCC 3 cut(s) 1003, 1958, 2018
AxyI CCTNAGG 1 cut(s) 999
BalI TGGCCA 1 cut(s) 708
BamHI GGATCC 1 cut(s) 1639
BanII GRGCYC 3 cut(s) 271, 1145, 1749
BbsI GAAGAC 1 cut(s) 1659
Bbv12I GWGCWC 1 cut(s) 271
BbvCI CCTCAGC 1 cut(s) 1047
BccI CCATC 4 cut(s) 664, 874, 1456, 1936
BceAI ACGGC 1 cut(s) 595
BciT130I CCWGG 3 cut(s) 1539, 1556, 1797
BcnI CCSGG 3 cut(s) 834, 950, 951
BcoDI GTCTC 6 cut(s) 30, 168, 586, 955, 1895, 1927
BfaI CTAG 2 cut(s) 1769, 1883
BfmI CTRYAG 2 cut(s) 443, 1373
BfrI CTTAAG 1 cut(s) 1972
BfuAI ACCTGC 2 cut(s) 686, 1606
BlpI GCTNAGC 1 cut(s) 1719
Bme1390I CCNGG 6 cut(s) 834, 950, 951, 1539, 1556, 1797
Bme18I GGWCC 3 cut(s) 1003, 1958, 2018
BmeRI GACNNNNNGTC 1 cut(s) 2016
BmeT110I CYCGRG 1 cut(s) 949
BmgT120I GGNCC 4 cut(s) 1003, 1063, 1958, 2018
BmiI GGNNCC 5 cut(s) 9, 66, 616, 1641, 1746
BmrFI CCNGG 6 cut(s) 834, 950, 951, 1539, 1556, 1797
BmsI GCATC 7 cut(s) 86, 574, 852, 1077, 1350, 1386, 1732
BpiI GAAGAC 1 cut(s) 1659
BpmI CTGGAG 2 cut(s) 765, 998
Bpu10I CCTNAGC 3 cut(s) 533, 634, 1047
Bpu1102I GCTNAGC 1 cut(s) 1719
BpuEI CTTGAG 2 cut(s) 1534, 1789
BpuMI CCSGG 3 cut(s) 834, 950, 951
BsaJI CCNNGG 8 cut(s) 791, 949, 950, 1454, 1555, 1582, 1749, 1920
BsaWI WCCGGW 1 cut(s) 2015
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 778, 1663, 1666
Bse1I ACTGG 2 cut(s) 1315, 1641
Bse21I CCTNAGG 1 cut(s) 999
Bse3DI GCAATG 2 cut(s) 1118, 1872
BseBI CCWGG 3 cut(s) 1539, 1556, 1797
BseDI CCNNGG 8 cut(s) 791, 949, 950, 1454, 1555, 1582, 1749, 1920
BseGI GGATG 5 cut(s) 829, 867, 1464, 1627, 2012
BseLI CCNNNNNNNGG 4 cut(s) 263, 778, 1663, 1666
BseMI GCAATG 2 cut(s) 1118, 1872
BseMII CTCAG 9 cut(s) 284, 347, 368, 524, 648, 767, 1013, 1061, 1244
BseNI ACTGG 2 cut(s) 1315, 1641
BseRI GAGGAG 3 cut(s) 220, 279, 1218
BshFI GGCC 3 cut(s) 708, 1064, 1314
BsiHKAI GWGCWC 1 cut(s) 271
BsiHKCI CYCGRG 1 cut(s) 949
BsiSI CCGG 4 cut(s) 167, 833, 950, 2016
BslI CCNNNNNNNGG 4 cut(s) 263, 778, 1663, 1666
BsmAI GTCTC 6 cut(s) 30, 168, 586, 955, 1895, 1927
BsmBI CGTCTC 3 cut(s) 30, 168, 1895
BsmI GAATGC 1 cut(s) 1912
BsnI GGCC 3 cut(s) 708, 1064, 1314
BsoBI CYCGRG 1 cut(s) 949
Bsp1286I GDGCHC 3 cut(s) 271, 1145, 1749
Bsp1407I TGTACA 1 cut(s) 1624
Bsp143I GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
Bsp1720I GCTNAGC 1 cut(s) 1719
BspACI CCGC 4 cut(s) 5, 156, 425, 714
BspANI GGCC 3 cut(s) 708, 1064, 1314
BspCNI CTCAG 9 cut(s) 283, 346, 367, 525, 647, 766, 1012, 1060, 1243
BspHI TCATGA 1 cut(s) 123
BspLI GGNNCC 5 cut(s) 9, 66, 616, 1641, 1746
BspMAI CTGCAG 1 cut(s) 447
BspMI ACCTGC 2 cut(s) 686, 1606
BspPI GGATC 6 cut(s) 268, 507, 892, 1611, 1634, 1647
BspQI GCTCTTC 1 cut(s) 1188
BspTI CTTAAG 1 cut(s) 1972
BsrDI GCAATG 2 cut(s) 1118, 1872
BsrGI TGTACA 1 cut(s) 1624
BsrI ACTGG 2 cut(s) 1315, 1641
BssECI CCNNGG 8 cut(s) 791, 949, 950, 1454, 1555, 1582, 1749, 1920
BssMI GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
BssT1I CCWWGG 4 cut(s) 1454, 1582, 1749, 1920
Bst2UI CCWGG 3 cut(s) 1539, 1556, 1797
Bst4CI ACNGT 5 cut(s) 178, 737, 852, 1221, 1834
Bst6I CTCTTC 3 cut(s) 403, 510, 1188
BstAFI CTTAAG 1 cut(s) 1972
BstAUI TGTACA 1 cut(s) 1624
BstC8I GCNNGC 6 cut(s) 600, 656, 867, 1081, 1875, 1912
BstEII GGTNACC 1 cut(s) 914
BstENI CCTNNNNNAGG 1 cut(s) 1664
BstF5I GGATG 5 cut(s) 829, 867, 1464, 1627, 2012
BstHHI GCGC 1 cut(s) 934
BstKTI GATC 7 cut(s) 276, 319, 515, 887, 1606, 1642, 1846
BstMAI GTCTC 6 cut(s) 30, 168, 586, 955, 1895, 1927
BstMBI GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
BstNI CCWGG 3 cut(s) 1539, 1556, 1797
BstNSI RCATGY 2 cut(s) 1631, 1710
BstPI GGTNACC 1 cut(s) 914
BstSCI CCNGG 6 cut(s) 832, 948, 949, 1537, 1554, 1795
BstSFI CTRYAG 2 cut(s) 443, 1373
BstV2I GAAGAC 1 cut(s) 1659
BstX2I RGATCY 3 cut(s) 273, 1603, 1639
BstXI CCANNNNNNTGG 1 cut(s) 1583
BstYI RGATCY 3 cut(s) 273, 1603, 1639
Bsu36I CCTNAGG 1 cut(s) 999
BsuRI GGCC 3 cut(s) 708, 1064, 1314
BtgZI GCGATG 2 cut(s) 185, 1955
BtsCI GGATG 5 cut(s) 829, 867, 1464, 1627, 2012
BtsIMutI CAGTG 1 cut(s) 887
BveI ACCTGC 2 cut(s) 686, 1606
Cac8I GCNNGC 6 cut(s) 600, 656, 867, 1081, 1875, 1912
CaiI CAGNNNCTG 2 cut(s) 442, 1606
CciI TCATGA 1 cut(s) 123
CfoI GCGC 1 cut(s) 934
Cfr13I GGNCC 4 cut(s) 1003, 1063, 1958, 2018
Cfr9I CCCGGG 1 cut(s) 949
CseI GACGC 1 cut(s) 150
CsiI ACCWGGT 1 cut(s) 1537
Csp6I GTAC 4 cut(s) 610, 1527, 1625, 1835
CviAII CATG 9 cut(s) 124, 457, 619, 808, 1084, 1469, 1628, 1707, 2038
CviQI GTAC 4 cut(s) 610, 1527, 1625, 1835
DpnI GATC 7 cut(s) 275, 318, 514, 886, 1605, 1641, 1845
DpnII GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
DraIII CACNNNGTG 1 cut(s) 1541
DriI GACNNNNNGTC 1 cut(s) 2016
EaeI YGGCCR 1 cut(s) 706
Eam1104I CTCTTC 3 cut(s) 403, 510, 1188
Eam1105I GACNNNNNGTC 1 cut(s) 2016
EarI CTCTTC 3 cut(s) 403, 510, 1188
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 269
Eco130I CCWWGG 4 cut(s) 1454, 1582, 1749, 1920
Eco24I GRGCYC 3 cut(s) 271, 1145, 1749
Eco32I GATATC 1 cut(s) 1272
Eco47I GGWCC 3 cut(s) 1003, 1958, 2018
Eco53kI GAGCTC 1 cut(s) 269
Eco57I CTGAAG 2 cut(s) 491, 1139
Eco81I CCTNAGG 1 cut(s) 999
Eco88I CYCGRG 1 cut(s) 949
Eco91I GGTNACC 1 cut(s) 914
EcoICRI GAGCTC 1 cut(s) 269
EcoNI CCTNNNNNAGG 1 cut(s) 1664
EcoO65I GGTNACC 1 cut(s) 914
EcoRII CCWGG 3 cut(s) 1537, 1554, 1795
EcoRV GATATC 1 cut(s) 1272
EcoT14I CCWWGG 4 cut(s) 1454, 1582, 1749, 1920
EcoT38I GRGCYC 3 cut(s) 271, 1145, 1749
ErhI CCWWGG 4 cut(s) 1454, 1582, 1749, 1920
Esp3I CGTCTC 3 cut(s) 30, 168, 1895
FaeI CATG 9 cut(s) 127, 460, 622, 811, 1087, 1472, 1631, 1710, 2041
FalI AAGNNNNNCTT 2 cut(s) 1644, 1676
FatI CATG 9 cut(s) 123, 456, 618, 807, 1083, 1468, 1627, 1706, 2037
FokI GGATG 5 cut(s) 816, 874, 1471, 1634, 1999
FriOI GRGCYC 3 cut(s) 271, 1145, 1749
FspBI CTAG 2 cut(s) 1769, 1883
FspI TGCGCA 1 cut(s) 933
GlaI GCGC 1 cut(s) 933
GsuI CTGGAG 2 cut(s) 765, 998
HaeIII GGCC 3 cut(s) 708, 1064, 1314
HapII CCGG 4 cut(s) 167, 833, 950, 2016
HgaI GACGC 1 cut(s) 150
HhaI GCGC 1 cut(s) 934
Hin1II CATG 9 cut(s) 127, 460, 622, 811, 1087, 1472, 1631, 1710, 2041
Hin6I GCGC 1 cut(s) 932
HinP1I GCGC 1 cut(s) 932
HincII GTYRAC 1 cut(s) 676
HindII GTYRAC 1 cut(s) 676
HpaI GTTAAC 1 cut(s) 676
HpaII CCGG 4 cut(s) 167, 833, 950, 2016
HphI GGTGA 4 cut(s) 24, 290, 987, 1957
Hpy166II GTNNAC 3 cut(s) 676, 1502, 1948
Hpy188I TCNGA 9 cut(s) 135, 207, 266, 273, 408, 756, 1157, 1962, 1993
Hpy188III TCNNGA 7 cut(s) 124, 690, 843, 1006, 1015, 1131, 1643
Hpy8I GTNNAC 3 cut(s) 676, 1502, 1948
Hpy99I CGWCG 1 cut(s) 283
HpyAV CCTTC 6 cut(s) 78, 105, 185, 294, 312, 528
HpyCH4III ACNGT 5 cut(s) 178, 737, 852, 1221, 1834
HpyCH4IV ACGT 2 cut(s) 585, 1819
HpySE526I ACGT 2 cut(s) 585, 1819
Hsp92II CATG 9 cut(s) 127, 460, 622, 811, 1087, 1472, 1631, 1710, 2041
HspAI GCGC 1 cut(s) 932
KspAI GTTAAC 1 cut(s) 676
Kzo9I GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
LguI GCTCTTC 1 cut(s) 1188
LmnI GCTCC 4 cut(s) 136, 266, 746, 1744
LweI GCATC 7 cut(s) 86, 574, 852, 1077, 1350, 1386, 1732
MabI ACCWGGT 1 cut(s) 1537
MaeI CTAG 2 cut(s) 1769, 1883
MaeII ACGT 2 cut(s) 585, 1819
MalI GATC 7 cut(s) 275, 318, 514, 886, 1605, 1641, 1845
MboI GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
MfeI CAATTG 3 cut(s) 359, 968, 1997
MflI RGATCY 3 cut(s) 273, 1603, 1639
MhlI GDGCHC 3 cut(s) 271, 1145, 1749
MlsI TGGCCA 1 cut(s) 708
MluNI TGGCCA 1 cut(s) 708
MlyI GAGTC 4 cut(s) 325, 1152, 1177, 1474
MmeI TCCRAC 2 cut(s) 1180, 1186
Mox20I TGGCCA 1 cut(s) 708
MroXI GAANNNNTTC 2 cut(s) 12, 1024
MscI TGGCCA 1 cut(s) 708
MseI TTAA 6 cut(s) 150, 675, 732, 1434, 1493, 1973
Msp20I TGGCCA 1 cut(s) 708
MspA1I CMGCKG 1 cut(s) 158
MspCI CTTAAG 1 cut(s) 1972
MspI CCGG 4 cut(s) 167, 833, 950, 2016
MspR9I CCNGG 6 cut(s) 834, 950, 951, 1539, 1556, 1797
MunI CAATTG 3 cut(s) 359, 968, 1997
Mva1269I GAATGC 1 cut(s) 1912
MvaI CCWGG 3 cut(s) 1539, 1556, 1797
NciI CCSGG 3 cut(s) 834, 950, 951
NdeII GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
NlaIII CATG 9 cut(s) 127, 460, 622, 811, 1087, 1472, 1631, 1710, 2041
NlaIV GGNNCC 5 cut(s) 9, 66, 616, 1641, 1746
NmeAIII GCCGAG 1 cut(s) 816
NmuCI GTSAC 5 cut(s) 30, 716, 972, 1101, 1693
NsbI TGCGCA 1 cut(s) 933
NspI RCATGY 2 cut(s) 1631, 1710
PagI TCATGA 1 cut(s) 123
PaqCI CACCTGC 1 cut(s) 1606
PciSI GCTCTTC 1 cut(s) 1188
PcsI WCGNNNNNNNCGW 1 cut(s) 1136
PctI GAATGC 1 cut(s) 1912
PdmI GAANNNNTTC 2 cut(s) 12, 1024
PflMI CCANNNNNTGG 1 cut(s) 778
PfoI TCCNGGA 2 cut(s) 832, 1795
PleI GAGTC 4 cut(s) 325, 1152, 1176, 1473
PpsI GAGTC 4 cut(s) 325, 1152, 1176, 1473
PshBI ATTAAT 1 cut(s) 1434
Psp124BI GAGCTC 1 cut(s) 271
Psp6I CCWGG 3 cut(s) 1537, 1554, 1795
PspEI GGTNACC 1 cut(s) 914
PspGI CCWGG 3 cut(s) 1537, 1554, 1795
PspN4I GGNNCC 5 cut(s) 9, 66, 616, 1641, 1746
PspPI GGNCC 4 cut(s) 1003, 1063, 1958, 2018
PstI CTGCAG 1 cut(s) 447
PstNI CAGNNNCTG 2 cut(s) 442, 1606
PsuI RGATCY 3 cut(s) 273, 1603, 1639
RsaI GTAC 4 cut(s) 611, 1528, 1626, 1836
RsaNI GTAC 4 cut(s) 610, 1527, 1625, 1835
SacI GAGCTC 1 cut(s) 271
SapI GCTCTTC 1 cut(s) 1188
SaqAI TTAA 6 cut(s) 150, 675, 732, 1434, 1493, 1973
Sau3AI GATC 7 cut(s) 273, 316, 512, 884, 1603, 1639, 1843
Sau96I GGNCC 4 cut(s) 1003, 1063, 1958, 2018
SchI GAGTC 4 cut(s) 325, 1152, 1177, 1474
ScrFI CCNGG 6 cut(s) 834, 950, 951, 1539, 1556, 1797
SduI GDGCHC 3 cut(s) 271, 1145, 1749
SexAI ACCWGGT 1 cut(s) 1537
SfaNI GCATC 7 cut(s) 86, 574, 852, 1077, 1350, 1386, 1732
SfcI CTRYAG 2 cut(s) 443, 1373
SinI GGWCC 3 cut(s) 1003, 1958, 2018
SmaI CCCGGG 1 cut(s) 951
SmlI CTYRAG 3 cut(s) 1549, 1804, 1972
SmoI CTYRAG 3 cut(s) 1549, 1804, 1972
SsiI CCGC 4 cut(s) 5, 156, 425, 714
SspI AATATT 1 cut(s) 763
SspMI CTAG 2 cut(s) 1769, 1883
SstI GAGCTC 1 cut(s) 271
StyD4I CCNGG 6 cut(s) 832, 948, 949, 1537, 1554, 1795
StyI CCWWGG 4 cut(s) 1454, 1582, 1749, 1920
TaaI ACNGT 5 cut(s) 178, 737, 852, 1221, 1834
TaiI ACGT 2 cut(s) 588, 1822
TaqI TCGA 1 cut(s) 482
TaqII GACCGA 1 cut(s) 1681
TatI WGTACW 1 cut(s) 1624
TauI GCSGC 1 cut(s) 427
Tru1I TTAA 6 cut(s) 150, 675, 732, 1434, 1493, 1973
Tru9I TTAA 6 cut(s) 150, 675, 732, 1434, 1493, 1973
TscAI CASTG 1 cut(s) 894
TseFI GTSAC 5 cut(s) 30, 716, 972, 1101, 1693
Tsp45I GTSAC 5 cut(s) 30, 716, 972, 1101, 1693
TspGWI ACGGA 1 cut(s) 627
TspMI CCCGGG 1 cut(s) 949
TspRI CASTG 1 cut(s) 894
Van91I CCANNNNNTGG 1 cut(s) 778
Vha464I CTTAAG 1 cut(s) 1972
VpaK11BI GGWCC 3 cut(s) 1003, 1958, 2018
VspI ATTAAT 1 cut(s) 1434
XagI CCTNNNNNAGG 1 cut(s) 1664
XapI RAATTY 2 cut(s) 540, 892
XceI RCATGY 2 cut(s) 1631, 1710
XmaI CCCGGG 1 cut(s) 949
XmnI GAANNNNTTC 2 cut(s) 12, 1024
XspI CTAG 2 cut(s) 1769, 1883
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.