RLG00000020131

Transcription initiation factor TFIID subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0010142
Physical Location & Seq
Forward (+)
61412473 .. 61417276
4804 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020131

Sequence Viewer

Length: 1881 bp
ATGGCCGAGAGTGGCTCATCTCCATCCCAAAAACCCTTGCAACCCCCAAACCCCAATAGCATTGAAGCATCAACAGCAGCCACCCCTAACATTATAATCACCCAAAACCCATCAAACCCTACCTCAAACCCACCAATCCCATCCCCTCAAACTCTCTCCCAATCTCCTCAAATCTCATCCCCACCCCTCCCTTCTCTCCCCACCATCTCTCTCCCCCAGAACCAACAGCTTATTTCCCCCACCGTCGGATTGGATTACACCCAGAAACCGAATCAGCTGCAGCAGCCATTGGTGCAGCAACAAGTGCAGGCTCAGAATGTAAATGTGAACGCCCTGTCGAATTTCCAGCTGCAGCAGCAGAGCATGCAGCGATCTCCGTCGATGTCGCGGCTGAACCAAATTCAGCAGCAGCAGCAGAATCAGAACCAGAGCCAGCAGCAGCAGCATTTCGGCATGATGAGGCAGCAAGGCAATTTGTATAGCCAGGTCAATTTCGGAGGCTCCGGTGCGATTCAGCAGCAGAACCAGACTCAGCAGCAGCAAATTGGCGGGGGGTCCCGAGCTGCCCTGCTTGGCCAGAGTGGCCACTTGCCCATGCTGTCTGGTGCTGCCGCTGCCGCAGCTGCGCAATACAGTATGCAGACGCAGTTGTTGGCTTCGCCGAGACAACAAGGCGGGTTAGTCCAAGGTACCCAATTTAGTTCTCCTGGACAATCTCTACAAGGAACACAAGCAATGGGTATGGGAATGATGAATTCCATGAATTTGACCCCACAACCAAGAGCTAATGGAGCCTTAGCTGCTTTTGCTCAGCGATTGAACCAGGGCCAACTTAGACAACAATTGTCCCAGCAAAGTTCGCTCGCCTCTCCGCAAAACTTGCCAAGAACATCCTCACTTGCATTTATGAACACTCAGCTATCTGGGCTGGCTCAGAATGGACAGCCAGCTATGATGCAGAATCCTTTATCACAACAGTGGGGGTTGAAGCAAATGCCAGCAATTTCAGGCCCTGGCTCACCTTCATACCGCCTTCAACAACAGAGGCAGCAGGCCATCTTCCAGCAGCAACTGGCTTCACCCACTCAGTTGCATCAACAGCCCATGTCCATGAAACAGCAAAAACAGTTACAGCAACAGCAGCAGCAGCAACAATTGGGGCTTCCTCAACTACAGCATCAACAACAGCAACAGCAGCAGCAAATACAGCAGCCACTACAACAACAATCACAGCAACAACAGCCCTTCAATCAACAACAGCAGCAACAGCAGCAGAATTCCCCAAGGATGCCTGTACCCGCAGGCCAGAAATCTCTTAGTTTAACAGGATCACAGCCTGATGCTACTGCATCTGGTACAACTACACCAGGAGGGAGTTCAAGCCAAGGAACAGAAGCAACTAACCAACTTCTTGGGAAGAGAAAGATGCAGGACTTAGTCTCACAGGTTGATTCACAGGGAAGGTTGGATTCTGAAGTTGAAGATCTTCTTTTGGAGATTGCTGATGACTTCATCGATTCAGTGACTACATTTGCATGCAGTTTGGCTAAGCATAGAAAATCTTCAACTTTAGAGTCCAAGGATGTGTTGCTGCACTTAGAAAAAAATTGGCATTTGACAATTCCCGGATTTTCAAGTGAAGAGAGGAAGTACCAAAATAAATCTTTGTCAAGTGATGTACATAAGAAACGTTTAGATATGATACGGACGCTGATGGAATCATCGCACCTGGAAACAAATACTAATAATCCTAAGGAGGGGATCAGAGGGTATGGCAACCCAGTTGGTGCCAACCACTTGATAAGACCTTCCCTTGGTTCAGAACAGTTGGTTTCCCAAGCAACTGGTTCTCAGATGCTGCAGCAGATAACACGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000124 GO:0000125 GO:0000428 GO:0001085 GO:0001101 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010104 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010646 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0023051 GO:0023052 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032870 GO:0032991 GO:0033276 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070297 GO:0070461 GO:0070887 GO:0070897 GO:0071229 GO:0071310 GO:0071368 GO:0071395 GO:0071495 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902493 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1905368 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
TFIID_20kDa

Protein Analysis

627

Amino Acids

68.45

Weight (kDa)

9.88

Isoelectric Point (pI)

71.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIID_20kDa PF03847 472 - 539 7.3e-32 Transcription initiation factor TFIID subunit A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010142)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17440 AT1G17440
fragaria_vesca FvH4_6g34640 FvH4_6g34640
malus_domestica MD09G1184100.v1.1 MD17G1168400.v1.1
prunus_persica Prupe.3G042400_v2.0.a1
pyrus_communis pycom09g10180 pycom17g16450
rosa_chinensis RchiOBHm_Chr2g0145171
rosa_laevigata RLG00000020131
rosa_multiflora Rmu_sc0002506.1_g000036
rosa_roxburghii Rroxscaffold_2G00100820
rosa_rugosa Rorug02G0390800 Rorug02G0390800 Rorug02G0390900
rosa_samantha Rh2AG443500 Rh2BG454500 Rh2CG430500 Rh2DG464400
rosa_wichuraiana Rw2G036270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 95
Acc16I TGCGCA 1 cut(s) 627
Acc65I GGTACC 1 cut(s) 689
AccB1I GGYRCC 2 cut(s) 689, 1787
AccII CGCG 1 cut(s) 388
AciI CCGC 8 cut(s) 388, 549, 612, 618, 675, 872, 1030, 1299
AclI AACGTT 1 cut(s) 1690
AclWI GGATC 2 cut(s) 1336, 1769
AcoI YGGCCR 3 cut(s) 3, 574, 583
AcsI RAATTY 5 cut(s) 340, 399, 754, 763, 1276
AcuI CTGAAG 1 cut(s) 1494
AfaI GTAC 5 cut(s) 691, 1296, 1357, 1652, 1680
AfiI CCNNNNNNNGG 3 cut(s) 245, 1757, 1814
AgsI TTSAA 9 cut(s) 65, 820, 988, 1037, 1249, 1380, 1481, 1566, 1635
AjnI CCWGG 6 cut(s) 483, 706, 822, 1012, 1366, 1728
AleI CACNNNNGTG 1 cut(s) 976
AluBI AGCT 9 cut(s) 229, 277, 349, 563, 623, 785, 800, 919, 950
AluI AGCT 9 cut(s) 229, 277, 349, 563, 623, 785, 800, 919, 950
Alw26I GTCTC 2 cut(s) 658, 1444
AlwI GGATC 2 cut(s) 1336, 1769
AlwNI CAGNNNCTG 3 cut(s) 1013, 1072, 1858
Ama87I CYCGRG 1 cut(s) 558
AoxI GGCC 7 cut(s) 3, 574, 583, 826, 1009, 1053, 1303
ApoI RAATTY 5 cut(s) 340, 399, 754, 763, 1276
Asp700I GAANNNNTTC 2 cut(s) 1485, 1561
Asp718I GGTACC 1 cut(s) 689
AspLEI GCGC 1 cut(s) 628
AspS9I GGNCC 3 cut(s) 555, 826, 1010
AsuC2I CCSGG 1 cut(s) 1626
AsuHPI GGTGA 3 cut(s) 91, 1011, 1071
AvaI CYCGRG 1 cut(s) 558
AvaII GGWCC 1 cut(s) 555
AxyI CCTNAGG 1 cut(s) 1752
BalI TGGCCA 2 cut(s) 576, 585
BanI GGYRCC 2 cut(s) 689, 1787
BccI CCATC 6 cut(s) 31, 118, 148, 212, 1064, 1708
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BciT130I CCWGG 6 cut(s) 485, 708, 824, 1014, 1368, 1730
BcnI CCSGG 1 cut(s) 1626
BcoDI GTCTC 2 cut(s) 658, 1444
BfmI CTRYAG 4 cut(s) 278, 350, 1172, 1859
BglI GCCNNNNNGGC 1 cut(s) 582
BglII AGATCT 1 cut(s) 1483
BlpI GCTNAGC 2 cut(s) 810, 1548
Bme1390I CCNGG 7 cut(s) 485, 708, 824, 1014, 1368, 1626, 1730
Bme18I GGWCC 1 cut(s) 555
BmeT110I CYCGRG 1 cut(s) 558
BmgT120I GGNCC 3 cut(s) 555, 826, 1010
BmiI GGNNCC 6 cut(s) 502, 556, 557, 691, 793, 1789
BmrFI CCNGG 7 cut(s) 485, 708, 824, 1014, 1368, 1626, 1730
BmrI ACTGGG 1 cut(s) 1775
BmsI GCATC 9 cut(s) 77, 945, 1102, 1186, 1278, 1330, 1358, 1416, 1845
BmuI ACTGGG 1 cut(s) 1775
BplI GAGNNNNNCTC 1 cut(s) 31
Bpu10I CCTNAGC 1 cut(s) 796
Bpu1102I GCTNAGC 2 cut(s) 810, 1548
BpuMI CCSGG 1 cut(s) 1626
Bsa29I ATCGAT 1 cut(s) 1515
BsaJI CCNNGG 7 cut(s) 685, 823, 1012, 1283, 1384, 1578, 1813
BsaWI WCCGGW 1 cut(s) 503
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 1757, 1814
Bse1I ACTGG 3 cut(s) 1077, 1781, 1849
Bse21I CCTNAGG 1 cut(s) 1752
Bse3DI GCAATG 1 cut(s) 741
BseBI CCWGG 6 cut(s) 485, 708, 824, 1014, 1368, 1730
BseCI ATCGAT 1 cut(s) 1515
BseDI CCNNGG 7 cut(s) 685, 823, 1012, 1283, 1384, 1578, 1813
BseGI GGATG 6 cut(s) 23, 140, 176, 890, 1293, 1588
BseLI CCNNNNNNNGG 3 cut(s) 245, 1757, 1814
BseMI GCAATG 1 cut(s) 741
BseMII CTCAG 7 cut(s) 326, 545, 824, 929, 947, 1100, 1865
BseNI ACTGG 3 cut(s) 1077, 1781, 1849
BseRI GAGGAG 1 cut(s) 156
BseYI CCCAGC 1 cut(s) 849
BsgI GTGCAG 3 cut(s) 314, 326, 1577
Bsh1236I CGCG 1 cut(s) 388
BshFI GGCC 7 cut(s) 5, 576, 585, 828, 1011, 1055, 1305
BshNI GGYRCC 2 cut(s) 689, 1787
BshVI ATCGAT 1 cut(s) 1515
BsiHKCI CYCGRG 1 cut(s) 558
BsiSI CCGG 2 cut(s) 504, 1626
BslFI GGGAC 2 cut(s) 541, 832
BslI CCNNNNNNNGG 3 cut(s) 245, 1757, 1814
BsmAI GTCTC 2 cut(s) 658, 1444
BsmFI GGGAC 2 cut(s) 541, 832
BsnI GGCC 7 cut(s) 5, 576, 585, 828, 1011, 1055, 1305
BsoBI CYCGRG 1 cut(s) 558
Bsp1407I TGTACA 1 cut(s) 1678
Bsp143I GATC 4 cut(s) 371, 1328, 1483, 1761
Bsp1720I GCTNAGC 2 cut(s) 810, 1548
BspACI CCGC 8 cut(s) 388, 549, 612, 618, 675, 872, 1030, 1299
BspANI GGCC 7 cut(s) 5, 576, 585, 828, 1011, 1055, 1305
BspCNI CTCAG 7 cut(s) 325, 544, 823, 928, 946, 1099, 1864
BspDI ATCGAT 1 cut(s) 1515
BspFNI CGCG 1 cut(s) 388
BspLI GGNNCC 6 cut(s) 502, 556, 557, 691, 793, 1789
BspMAI CTGCAG 3 cut(s) 282, 354, 1863
BspPI GGATC 2 cut(s) 1336, 1769
BspT107I GGYRCC 2 cut(s) 689, 1787
BsrDI GCAATG 1 cut(s) 741
BsrGI TGTACA 1 cut(s) 1678
BsrI ACTGG 3 cut(s) 1077, 1781, 1849
BssECI CCNNGG 7 cut(s) 685, 823, 1012, 1283, 1384, 1578, 1813
BssMI GATC 4 cut(s) 371, 1328, 1483, 1761
BssT1I CCWWGG 5 cut(s) 685, 1283, 1384, 1578, 1813
Bst2UI CCWGG 6 cut(s) 485, 708, 824, 1014, 1368, 1730
Bst4CI ACNGT 6 cut(s) 244, 635, 978, 1128, 1827, 1875
Bst6I CTCTTC 2 cut(s) 1412, 1635
BstAPI GCANNNNNTGC 3 cut(s) 304, 364, 880
BstAUI TGTACA 1 cut(s) 1678
BstF5I GGATG 6 cut(s) 23, 140, 176, 890, 1293, 1588
BstFNI CGCG 1 cut(s) 388
BstHHI GCGC 1 cut(s) 628
BstKTI GATC 4 cut(s) 374, 1331, 1486, 1764
BstMAI GTCTC 2 cut(s) 658, 1444
BstMBI GATC 4 cut(s) 371, 1328, 1483, 1761
BstNI CCWGG 6 cut(s) 485, 708, 824, 1014, 1368, 1730
BstNSI RCATGY 2 cut(s) 367, 1539
BstSCI CCNGG 7 cut(s) 483, 706, 822, 1012, 1366, 1624, 1728
BstSFI CTRYAG 4 cut(s) 278, 350, 1172, 1859
BstUI CGCG 1 cut(s) 388
BstX2I RGATCY 1 cut(s) 1483
BstXI CCANNNNNNTGG 2 cut(s) 1412, 1844
BstYI RGATCY 1 cut(s) 1483
Bsu15I ATCGAT 1 cut(s) 1515
Bsu36I CCTNAGG 1 cut(s) 1752
BsuRI GGCC 7 cut(s) 5, 576, 585, 828, 1011, 1055, 1305
BsuTUI ATCGAT 1 cut(s) 1515
BtgZI GCGATG 1 cut(s) 1707
BtsCI GGATG 6 cut(s) 23, 140, 176, 890, 1293, 1588
BtsIMutI CAGTG 2 cut(s) 983, 1527
CaiI CAGNNNCTG 3 cut(s) 1013, 1072, 1858
CfoI GCGC 1 cut(s) 628
Cfr13I GGNCC 3 cut(s) 555, 826, 1010
ClaI ATCGAT 1 cut(s) 1515
CseI GACGC 2 cut(s) 652, 1717
Csp6I GTAC 5 cut(s) 690, 1295, 1356, 1651, 1679
CviAII CATG 7 cut(s) 364, 454, 595, 760, 1105, 1111, 1536
CviQI GTAC 5 cut(s) 690, 1295, 1356, 1651, 1679
DpnI GATC 4 cut(s) 373, 1330, 1485, 1763
DpnII GATC 4 cut(s) 371, 1328, 1483, 1761
EaeI YGGCCR 3 cut(s) 3, 574, 583
Eam1104I CTCTTC 2 cut(s) 1412, 1635
EarI CTCTTC 2 cut(s) 1412, 1635
Eco130I CCWWGG 5 cut(s) 685, 1283, 1384, 1578, 1813
Eco47I GGWCC 1 cut(s) 555
Eco57I CTGAAG 1 cut(s) 1494
Eco81I CCTNAGG 1 cut(s) 1752
Eco88I CYCGRG 1 cut(s) 558
EcoO109I RGGNCCY 2 cut(s) 555, 1010
EcoRI GAATTC 2 cut(s) 754, 1276
EcoRII CCWGG 6 cut(s) 483, 706, 822, 1012, 1366, 1728
EcoT14I CCWWGG 5 cut(s) 685, 1283, 1384, 1578, 1813
ErhI CCWWGG 5 cut(s) 685, 1283, 1384, 1578, 1813
FaeI CATG 7 cut(s) 367, 457, 598, 763, 1108, 1114, 1539
FalI AAGNNNNNCTT 2 cut(s) 1473, 1505
FaqI GGGAC 2 cut(s) 541, 832
FatI CATG 7 cut(s) 363, 453, 594, 759, 1104, 1110, 1535
FauI CCCGC 3 cut(s) 542, 668, 1306
FokI GGATG 6 cut(s) 10, 127, 163, 877, 1300, 1595
FspI TGCGCA 1 cut(s) 627
GlaI GCGC 1 cut(s) 627
GsaI CCCAGC 1 cut(s) 853
HaeIII GGCC 7 cut(s) 5, 576, 585, 828, 1011, 1055, 1305
HapII CCGG 2 cut(s) 504, 1626
HgaI GACGC 2 cut(s) 652, 1717
HhaI GCGC 1 cut(s) 628
Hin1II CATG 7 cut(s) 367, 457, 598, 763, 1108, 1114, 1539
Hin6I GCGC 1 cut(s) 626
HinP1I GCGC 1 cut(s) 626
HpaII CCGG 2 cut(s) 504, 1626
HphI GGTGA 3 cut(s) 91, 1011, 1071
Hpy166II GTNNAC 1 cut(s) 328
Hpy188I TCNGA 9 cut(s) 248, 315, 423, 497, 936, 1474, 1766, 1822, 1854
Hpy188III TCNNGA 1 cut(s) 558
Hpy8I GTNNAC 1 cut(s) 328
Hpy99I CGWCG 2 cut(s) 248, 382
HpyAV CCTTC 6 cut(s) 201, 1032, 1043, 1255, 1455, 1818
HpyCH4III ACNGT 6 cut(s) 244, 635, 978, 1128, 1827, 1875
HpyCH4IV ACGT 1 cut(s) 1690
HpySE526I ACGT 1 cut(s) 1690
Hsp92II CATG 7 cut(s) 367, 457, 598, 763, 1108, 1114, 1539
HspAI GCGC 1 cut(s) 626
KflI GGGWCCC 1 cut(s) 555
KpnI GGTACC 1 cut(s) 693
Kzo9I GATC 4 cut(s) 371, 1328, 1483, 1761
LmnI GCTCC 2 cut(s) 506, 791
LweI GCATC 9 cut(s) 77, 945, 1102, 1186, 1278, 1330, 1358, 1416, 1845
MaeII ACGT 1 cut(s) 1690
MaeIII GTNAC 2 cut(s) 1128, 1522
MalI GATC 4 cut(s) 373, 1330, 1485, 1763
MboI GATC 4 cut(s) 371, 1328, 1483, 1761
MboII GAAGA 6 cut(s) 1051, 1429, 1478, 1493, 1554, 1652
MfeI CAATTG 2 cut(s) 842, 1154
MflI RGATCY 1 cut(s) 1483
MlsI TGGCCA 2 cut(s) 576, 585
MluNI TGGCCA 2 cut(s) 576, 585
MlyI GAGTC 2 cut(s) 523, 1583
MmeI TCCRAC 2 cut(s) 226, 1446
Mox20I TGGCCA 2 cut(s) 576, 585
MroXI GAANNNNTTC 2 cut(s) 1485, 1561
MscI TGGCCA 2 cut(s) 576, 585
MseI TTAA 1 cut(s) 1322
MslI CAYNNNNRTG 3 cut(s) 976, 1109, 1534
Msp20I TGGCCA 2 cut(s) 576, 585
MspA1I CMGCKG 4 cut(s) 277, 349, 614, 623
MspI CCGG 2 cut(s) 504, 1626
MspR9I CCNGG 7 cut(s) 485, 708, 824, 1014, 1368, 1626, 1730
MunI CAATTG 2 cut(s) 842, 1154
MvaI CCWGG 6 cut(s) 485, 708, 824, 1014, 1368, 1730
MvnI CGCG 1 cut(s) 388
NciI CCSGG 1 cut(s) 1626
NdeII GATC 4 cut(s) 371, 1328, 1483, 1761
NlaIII CATG 7 cut(s) 367, 457, 598, 763, 1108, 1114, 1539
NlaIV GGNNCC 6 cut(s) 502, 556, 557, 691, 793, 1789
NmeAIII GCCGAG 2 cut(s) 31, 687
NmuCI GTSAC 1 cut(s) 1522
NsbI TGCGCA 1 cut(s) 627
NspI RCATGY 2 cut(s) 367, 1539
OliI CACNNNNGTG 1 cut(s) 976
PaeI GCATGC 2 cut(s) 367, 1539
PdmI GAANNNNTTC 2 cut(s) 1485, 1561
PfeI GAWTC 8 cut(s) 271, 418, 511, 961, 1451, 1469, 1517, 1718
PflFI GACNNNGTC 1 cut(s) 1436
PfoI TCCNGGA 2 cut(s) 706, 1624
PleI GAGTC 2 cut(s) 523, 1582
PpsI GAGTC 2 cut(s) 523, 1582
PpuMI RGGWCCY 1 cut(s) 555
PsiI TTATAA 1 cut(s) 95
Psp1406I AACGTT 1 cut(s) 1690
Psp5II RGGWCCY 1 cut(s) 555
Psp6I CCWGG 6 cut(s) 483, 706, 822, 1012, 1366, 1728
PspFI CCCAGC 1 cut(s) 849
PspGI CCWGG 6 cut(s) 483, 706, 822, 1012, 1366, 1728
PspN4I GGNNCC 6 cut(s) 502, 556, 557, 691, 793, 1789
PspPI GGNCC 3 cut(s) 555, 826, 1010
PspPPI RGGWCCY 1 cut(s) 555
PstI CTGCAG 3 cut(s) 282, 354, 1863
PstNI CAGNNNCTG 3 cut(s) 1013, 1072, 1858
PsuI RGATCY 1 cut(s) 1483
PsyI GACNNNGTC 1 cut(s) 1436
PvuII CAGCTG 3 cut(s) 277, 349, 623
RsaI GTAC 5 cut(s) 691, 1296, 1357, 1652, 1680
RsaNI GTAC 5 cut(s) 690, 1295, 1356, 1651, 1679
RseI CAYNNNNRTG 3 cut(s) 976, 1109, 1534
SaqAI TTAA 1 cut(s) 1322
Sau3AI GATC 4 cut(s) 371, 1328, 1483, 1761
Sau96I GGNCC 3 cut(s) 555, 826, 1010
SchI GAGTC 2 cut(s) 523, 1583
ScrFI CCNGG 7 cut(s) 485, 708, 824, 1014, 1368, 1626, 1730
SfaNI GCATC 9 cut(s) 77, 945, 1102, 1186, 1278, 1330, 1358, 1416, 1845
SfcI CTRYAG 4 cut(s) 278, 350, 1172, 1859
SfiI GGCCNNNNNGGCC 1 cut(s) 582
SinI GGWCC 1 cut(s) 555
SmiMI CAYNNNNRTG 3 cut(s) 976, 1109, 1534
SphI GCATGC 2 cut(s) 367, 1539
SsiI CCGC 8 cut(s) 388, 549, 612, 618, 675, 872, 1030, 1299
StyD4I CCNGG 7 cut(s) 483, 706, 822, 1012, 1366, 1624, 1728
StyI CCWWGG 5 cut(s) 685, 1283, 1384, 1578, 1813
TaaI ACNGT 6 cut(s) 244, 635, 978, 1128, 1827, 1875
TaiI ACGT 1 cut(s) 1693
TaqI TCGA 3 cut(s) 338, 380, 1515
TatI WGTACW 1 cut(s) 1678
TauI GCSGC 3 cut(s) 391, 614, 620
TfiI GAWTC 8 cut(s) 271, 418, 511, 961, 1451, 1469, 1517, 1718
Tru1I TTAA 1 cut(s) 1322
Tru9I TTAA 1 cut(s) 1322
TscAI CASTG 2 cut(s) 983, 1527
TseFI GTSAC 1 cut(s) 1522
Tsp45I GTSAC 1 cut(s) 1522
TspDTI ATGAA 6 cut(s) 767, 776, 923, 1014, 1127, 1501
TspGWI ACGGA 2 cut(s) 366, 1720
TspRI CASTG 2 cut(s) 983, 1527
Tth111I GACNNNGTC 1 cut(s) 1436
VpaK11BI GGWCC 1 cut(s) 555
XapI RAATTY 5 cut(s) 340, 399, 754, 763, 1276
XceI RCATGY 2 cut(s) 367, 1539
XcmI CCANNNNNNNNNTGG 1 cut(s) 247
XmnI GAANNNNTTC 2 cut(s) 1485, 1561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.