FvH4_6g34640

Transcription initiation factor TFIID subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0010142
Physical Location & Seq
Forward (+)
27318079 .. 27323825
5747 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g34640.t1

Sequence Viewer

Length: 1863 bp
ATGGCTGAGAATGTCTCATCTCCATCCCAAAAACCCCTGCAACCTCCAAACCCCAATAGCATTGAAGCCTCAACAGCAGCAGCCTCCCCAAACATTATAATCACCCAAAACCAAAACCCATCAAACTCAGCAGCCTCAAACCCAGCAATCCCATCTCCCCAAATCTCATCCCCGCCCCTCCCTCCTCTCCCCTCCATCTCCCTCCCACAAAACCAACAGCTCCTCTCCCCCACCGTCGGATTGGACTACACCCAGAAACCCAATCCCCAATCACAGCCGTTGGTTCAGCAACAGAATGTAATGTCGAATTTCCAGCTGCAGCAGAGCATGCAGCGATCGCCGTCCATGTCGCGGCTGAACCAGATTCAGCAGCAGAACCAGAGCCAGCAGCAGCAGCATTTCGGTATGATGAGGCAGCAGCAGGCCAACTTGTATGGCCAGCAGGTCAGTTTCGGAGGCTCCGGCGGAATTCAGCAGTCCAATCAGCAGCAACAGCAGAACCAGACGCAGCAGCAGCAGCAAATTGGCGGGGGCAGCTTGTCCCGAGCTGCCCTGCTCAGCCAGAGCGGCCAACTGCCAATGCTGTCTGGTGCTGCTGCCACGGCTGCGCAGTTCAATATGCAGCCGCAGTTGTTGGCTTCGCCACGACAAAAAAGCGGGTTAGTCCAAGGTACGCAATTTAATTCTCCTGGACAATCTCTACAAGGAACACAAGCCATGGGTATGGGGATGATGGGATCCATCAATTTGACCTCACAGCTAAGAGCTAATGGAGCCCTAGCTTATGCTCAACAACGACTGAACCAGGGCGGCCAACTTAGACAACAATTGTCCCAGCAAAGTTCACTCGCCTCTCCGCAGAACTTGCCAAGAACATCCTCACTTGCATTTATGAACCCTCAGCTATCTGGGCTGGCTCAGAACGGACAGCCAGCTATGATGCAGAATTCTTTATCACAACAGTGGTTGAAGCAAATGCCAGCAATTTCAGGCCCTGGCTCACCTTCATACCGCCTTCAGCAACAGAGACAGCAGGCTATCTTCCAGCAGCAACTGGCTTCATCCACTCAGTTGCATCAAAAGTCCTTGTCGATGAACCAGCAACAGTTATCCCAGATTGTACAGCAACAGCAGCAGCAACAACAGTTGGGGCTTCCACAGCTGCAGCATCAACAACAGCAGCAACATCAACAGCAAATACAGCAGCCACTACAACAACAATCACAGCAACAACAGCCTTTCAATCAGCAGCAGCAGCAGCCGCAGCAGAATTCCCCAAGGATGCCTGTACCGGCAGGCCAGAAATCTCTTAGTTTAACAGGATCACAGCCTGATGCTACTGCATCTGGTACAACTACACCAGGAGGGAGTTCAAGCCAAGGGACAGAAGCAACCAACCAACTTCTTGGGAAGAGAAAAATGCAAGATTTAGTCTCACAGGGAAGGTTGGATTCTGAAGTTGAAGATCTTCTTTTGGAGATTGCAGATGACTTCATTGATTCGGTGACTACATTTGCATGTAGTTTGGCAAAGCATAGAAAATCTTCAACTTTAGAGTCCAAGGATGTGTTGCTACACTTAGAGAAAAATTGGCATTTGACAATTCCCGGATTTTCAAGTGAAGAGAGGAAGTACCAAAACAAATCTTTGTCAAGTGATGTACATAAGAAACGTTTAGATATGATACGGATGCTGATGGAATCATCACAACCAGAAACAAATACTAATAATCCTAAGGAGGTGATCAGAGGGTATGGTAACCCTGTTGGTGCCAACCACTTGATAAGACCTTCCCTTGGTGGAGAACAGTTGGTTTCCCAAGCAACTGGTTCTCAGATGCTGCAGCAGATGACACGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000124 GO:0000125 GO:0000428 GO:0001085 GO:0001101 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010104 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010646 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0023051 GO:0023052 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032870 GO:0032991 GO:0033276 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070297 GO:0070461 GO:0070887 GO:0070897 GO:0071229 GO:0071310 GO:0071368 GO:0071395 GO:0071495 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902493 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1905368 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
TFIID_20kDa

Protein Analysis

621

Amino Acids

67.82

Weight (kDa)

9.96

Isoelectric Point (pI)

73.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIID_20kDa PF03847 470 - 533 1.9e-26 Transcription initiation factor TFIID subunit A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010142)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17440 AT1G17440
fragaria_vesca FvH4_6g34640 FvH4_6g34640
malus_domestica MD09G1184100.v1.1 MD17G1168400.v1.1
prunus_persica Prupe.3G042400_v2.0.a1
pyrus_communis pycom09g10180 pycom17g16450
rosa_chinensis RchiOBHm_Chr2g0145171
rosa_laevigata RLG00000020131
rosa_multiflora Rmu_sc0002506.1_g000036
rosa_roxburghii Rroxscaffold_2G00100820
rosa_rugosa Rorug02G0390800 Rorug02G0390800 Rorug02G0390900
rosa_samantha Rh2AG443500 Rh2BG454500 Rh2CG430500 Rh2DG464400
rosa_wichuraiana Rw2G036270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 98
Acc16I TGCGCA 1 cut(s) 609
Acc36I ACCTGC 1 cut(s) 433
AccB1I GGYRCC 1 cut(s) 1769
AccBSI CCGCTC 1 cut(s) 567
AccII CGCG 1 cut(s) 352
AclI AACGTT 1 cut(s) 1672
AclWI GGATC 3 cut(s) 732, 745, 1330
AcoI YGGCCR 3 cut(s) 436, 568, 811
AcsI RAATTY 4 cut(s) 307, 468, 946, 1270
AcuI CTGAAG 2 cut(s) 1001, 1476
AfaI GTAC 6 cut(s) 673, 1122, 1290, 1351, 1634, 1662
AfiI CCNNNNNNNGG 3 cut(s) 236, 351, 1796
AgsI TTSAA 8 cut(s) 65, 616, 970, 1243, 1374, 1463, 1548, 1617
AjnI CCWGG 4 cut(s) 688, 804, 994, 1360
AleI CACNNNNGTG 1 cut(s) 961
Alw26I GTCTC 3 cut(s) 19, 1021, 1438
AlwI GGATC 3 cut(s) 732, 745, 1330
AlwNI CAGNNNCTG 3 cut(s) 995, 1054, 1840
Ama87I CYCGRG 1 cut(s) 543
AoxI GGCC 6 cut(s) 423, 436, 568, 811, 991, 1297
ApoI RAATTY 4 cut(s) 307, 468, 946, 1270
AsiSI GCGATCGC 1 cut(s) 338
Asp700I GAANNNNTTC 2 cut(s) 1467, 1543
AspLEI GCGC 1 cut(s) 610
AspS9I GGNCC 1 cut(s) 992
AsuC2I CCSGG 1 cut(s) 1608
AsuHPI GGTGA 4 cut(s) 94, 993, 1516, 1753
AvaI CYCGRG 1 cut(s) 543
AxyI CCTNAGG 1 cut(s) 1734
BalI TGGCCA 1 cut(s) 438
BamHI GGATCC 1 cut(s) 737
BanI GGYRCC 1 cut(s) 1769
BanII GRGCYC 1 cut(s) 778
BbvCI CCTCAGC 1 cut(s) 900
BccI CCATC 7 cut(s) 31, 127, 160, 203, 727, 749, 1690
BceAI ACGGC 3 cut(s) 262, 325, 618
BciT130I CCWGG 4 cut(s) 690, 806, 996, 1362
BclI TGATCA 1 cut(s) 1743
BcnI CCSGG 1 cut(s) 1608
BcoDI GTCTC 3 cut(s) 19, 1021, 1438
BfaI CTAG 1 cut(s) 779
BfmI CTRYAG 3 cut(s) 317, 1163, 1841
BfuAI ACCTGC 1 cut(s) 433
BglI GCCNNNNNGGC 1 cut(s) 567
BglII AGATCT 1 cut(s) 1465
BlpI GCTNAGC 1 cut(s) 557
Bme1390I CCNGG 5 cut(s) 690, 806, 996, 1362, 1608
BmeT110I CYCGRG 1 cut(s) 543
BmgT120I GGNCC 1 cut(s) 992
BmiI GGNNCC 4 cut(s) 460, 739, 775, 1771
BmrFI CCNGG 5 cut(s) 690, 806, 996, 1362, 1608
BmsI GCATC 8 cut(s) 930, 1084, 1177, 1272, 1324, 1352, 1680, 1827
BplI GAGNNNNNCTC 1 cut(s) 31
Bpu10I CCTNAGC 1 cut(s) 900
Bpu1102I GCTNAGC 1 cut(s) 557
BpuMI CCSGG 1 cut(s) 1608
BsaJI CCNNGG 9 cut(s) 600, 667, 717, 805, 994, 1277, 1378, 1560, 1795
Bsc4I CCNNNNNNNGG 3 cut(s) 236, 351, 1796
Bse118I RCCGGY 1 cut(s) 1291
Bse1I ACTGG 2 cut(s) 1059, 1831
Bse21I CCTNAGG 1 cut(s) 1734
BseBI CCWGG 4 cut(s) 690, 806, 996, 1362
BseDI CCNNGG 9 cut(s) 600, 667, 717, 805, 994, 1277, 1378, 1560, 1795
BseGI GGATG 8 cut(s) 23, 167, 735, 875, 1061, 1287, 1570, 1695
BseLI CCNNNNNNNGG 3 cut(s) 236, 351, 1796
BseMII CTCAG 6 cut(s) 141, 571, 914, 932, 1082, 1847
BseNI ACTGG 2 cut(s) 1059, 1831
BseRI GAGGAG 2 cut(s) 174, 212
BseYI CCCAGC 2 cut(s) 142, 834
Bsh1236I CGCG 1 cut(s) 352
Bsh1285I CGRYCG 1 cut(s) 338
BshFI GGCC 6 cut(s) 425, 438, 570, 813, 993, 1299
BshNI GGYRCC 1 cut(s) 1769
BsiEI CGRYCG 1 cut(s) 338
BsiHKCI CYCGRG 1 cut(s) 543
BsiSI CCGG 3 cut(s) 462, 1292, 1608
BslFI GGGAC 3 cut(s) 526, 817, 1396
BslI CCNNNNNNNGG 3 cut(s) 236, 351, 1796
BsmAI GTCTC 3 cut(s) 19, 1021, 1438
BsmFI GGGAC 3 cut(s) 526, 817, 1396
BsnI GGCC 6 cut(s) 425, 438, 570, 813, 993, 1299
BsoBI CYCGRG 1 cut(s) 543
Bsp1286I GDGCHC 1 cut(s) 778
Bsp1407I TGTACA 2 cut(s) 1120, 1660
Bsp143I GATC 5 cut(s) 335, 737, 1322, 1465, 1743
Bsp1720I GCTNAGC 1 cut(s) 557
Bsp19I CCATGG 1 cut(s) 717
BspANI GGCC 6 cut(s) 425, 438, 570, 813, 993, 1299
BspCNI CTCAG 6 cut(s) 140, 570, 913, 931, 1081, 1846
BspFNI CGCG 1 cut(s) 352
BspLI GGNNCC 4 cut(s) 460, 739, 775, 1771
BspMAI CTGCAG 3 cut(s) 321, 1167, 1845
BspMI ACCTGC 1 cut(s) 433
BspPI GGATC 3 cut(s) 732, 745, 1330
BspT107I GGYRCC 1 cut(s) 1769
BsrBI CCGCTC 1 cut(s) 567
BsrFI RCCGGY 1 cut(s) 1291
BsrGI TGTACA 2 cut(s) 1120, 1660
BsrI ACTGG 2 cut(s) 1059, 1831
BssAI RCCGGY 1 cut(s) 1291
BssECI CCNNGG 9 cut(s) 600, 667, 717, 805, 994, 1277, 1378, 1560, 1795
BssMI GATC 5 cut(s) 335, 737, 1322, 1465, 1743
BssT1I CCWWGG 6 cut(s) 667, 717, 1277, 1378, 1560, 1795
Bst2UI CCWGG 4 cut(s) 690, 806, 996, 1362
Bst4CI ACNGT 6 cut(s) 235, 963, 1107, 1146, 1809, 1857
Bst6I CTCTTC 2 cut(s) 1406, 1617
BstAPI GCANNNNNTGC 2 cut(s) 328, 865
BstAUI TGTACA 2 cut(s) 1120, 1660
BstC8I GCNNGC 9 cut(s) 329, 386, 423, 440, 915, 933, 981, 1035, 1297
BstDSI CCRYGG 2 cut(s) 600, 717
BstEII GGTNACC 1 cut(s) 1757
BstF5I GGATG 8 cut(s) 23, 167, 735, 875, 1061, 1287, 1570, 1695
BstFNI CGCG 1 cut(s) 352
BstHHI GCGC 1 cut(s) 610
BstKTI GATC 5 cut(s) 338, 740, 1325, 1468, 1746
BstMAI GTCTC 3 cut(s) 19, 1021, 1438
BstMBI GATC 5 cut(s) 335, 737, 1322, 1465, 1743
BstMCI CGRYCG 1 cut(s) 338
BstNI CCWGG 4 cut(s) 690, 806, 996, 1362
BstNSI RCATGY 2 cut(s) 331, 1521
BstPI GGTNACC 1 cut(s) 1757
BstSCI CCNGG 5 cut(s) 688, 804, 994, 1360, 1606
BstSFI CTRYAG 3 cut(s) 317, 1163, 1841
BstUI CGCG 1 cut(s) 352
BstX2I RGATCY 2 cut(s) 737, 1465
BstXI CCANNNNNNTGG 3 cut(s) 724, 1406, 1826
BstYI RGATCY 2 cut(s) 737, 1465
Bsu36I CCTNAGG 1 cut(s) 1734
BsuRI GGCC 6 cut(s) 425, 438, 570, 813, 993, 1299
BtgI CCRYGG 2 cut(s) 600, 717
BtsCI GGATG 8 cut(s) 23, 167, 735, 875, 1061, 1287, 1570, 1695
BtsIMutI CAGTG 1 cut(s) 968
BveI ACCTGC 1 cut(s) 433
Cac8I GCNNGC 9 cut(s) 329, 386, 423, 440, 915, 933, 981, 1035, 1297
CaiI CAGNNNCTG 3 cut(s) 995, 1054, 1840
CfoI GCGC 1 cut(s) 610
Cfr10I RCCGGY 1 cut(s) 1291
Cfr13I GGNCC 1 cut(s) 992
CseI GACGC 1 cut(s) 514
Csp6I GTAC 6 cut(s) 672, 1121, 1289, 1350, 1633, 1661
CviAII CATG 4 cut(s) 328, 346, 718, 1518
CviQI GTAC 6 cut(s) 672, 1121, 1289, 1350, 1633, 1661
DpnI GATC 5 cut(s) 337, 739, 1324, 1467, 1745
DpnII GATC 5 cut(s) 335, 737, 1322, 1465, 1743
EaeI YGGCCR 3 cut(s) 436, 568, 811
Eam1104I CTCTTC 2 cut(s) 1406, 1617
EarI CTCTTC 2 cut(s) 1406, 1617
EciI GGCGGA 1 cut(s) 480
Eco130I CCWWGG 6 cut(s) 667, 717, 1277, 1378, 1560, 1795
Eco24I GRGCYC 1 cut(s) 778
Eco57I CTGAAG 2 cut(s) 1001, 1476
Eco81I CCTNAGG 1 cut(s) 1734
Eco88I CYCGRG 1 cut(s) 543
Eco91I GGTNACC 1 cut(s) 1757
EcoO109I RGGNCCY 1 cut(s) 992
EcoO65I GGTNACC 1 cut(s) 1757
EcoRI GAATTC 3 cut(s) 468, 946, 1270
EcoRII CCWGG 4 cut(s) 688, 804, 994, 1360
EcoT14I CCWWGG 6 cut(s) 667, 717, 1277, 1378, 1560, 1795
EcoT38I GRGCYC 1 cut(s) 778
ErhI CCWWGG 6 cut(s) 667, 717, 1277, 1378, 1560, 1795
FaeI CATG 4 cut(s) 331, 349, 721, 1521
FalI AAGNNNNNCTT 2 cut(s) 1455, 1487
FaqI GGGAC 3 cut(s) 526, 817, 1396
FatI CATG 4 cut(s) 327, 345, 717, 1517
FauI CCCGC 3 cut(s) 180, 521, 650
FbaI TGATCA 1 cut(s) 1743
FokI GGATG 8 cut(s) 10, 154, 742, 862, 1048, 1294, 1577, 1702
FriOI GRGCYC 1 cut(s) 778
FspBI CTAG 1 cut(s) 779
FspI TGCGCA 1 cut(s) 609
GlaI GCGC 1 cut(s) 609
GsaI CCCAGC 2 cut(s) 146, 838
HaeIII GGCC 6 cut(s) 425, 438, 570, 813, 993, 1299
HapII CCGG 3 cut(s) 462, 1292, 1608
HgaI GACGC 1 cut(s) 514
HhaI GCGC 1 cut(s) 610
Hin1II CATG 4 cut(s) 331, 349, 721, 1521
Hin6I GCGC 1 cut(s) 608
HinP1I GCGC 1 cut(s) 608
HinfI GANTC 5 cut(s) 364, 1451, 1499, 1556, 1700
HpaII CCGG 3 cut(s) 462, 1292, 1608
HphI GGTGA 4 cut(s) 94, 993, 1516, 1753
Hpy166II GTNNAC 1 cut(s) 845
Hpy188I TCNGA 6 cut(s) 239, 455, 921, 1456, 1748, 1836
Hpy188III TCNNGA 1 cut(s) 543
Hpy8I GTNNAC 1 cut(s) 845
Hpy99I CGWCG 1 cut(s) 239
HpyAV CCTTC 4 cut(s) 1014, 1025, 1437, 1800
HpyCH4III ACNGT 6 cut(s) 235, 963, 1107, 1146, 1809, 1857
HpyCH4IV ACGT 1 cut(s) 1672
HpySE526I ACGT 1 cut(s) 1672
Hsp92II CATG 4 cut(s) 331, 349, 721, 1521
HspAI GCGC 1 cut(s) 608
Ksp22I TGATCA 1 cut(s) 1743
Kzo9I GATC 5 cut(s) 335, 737, 1322, 1465, 1743
LmnI GCTCC 3 cut(s) 225, 464, 773
LweI GCATC 8 cut(s) 930, 1084, 1177, 1272, 1324, 1352, 1680, 1827
MaeI CTAG 1 cut(s) 779
MaeII ACGT 1 cut(s) 1672
MaeIII GTNAC 2 cut(s) 1504, 1757
MalI GATC 5 cut(s) 337, 739, 1324, 1467, 1745
MbiI CCGCTC 1 cut(s) 567
MboI GATC 5 cut(s) 335, 737, 1322, 1465, 1743
MboII GAAGA 6 cut(s) 1033, 1423, 1460, 1475, 1536, 1634
MfeI CAATTG 1 cut(s) 827
MflI RGATCY 2 cut(s) 737, 1465
MhlI GDGCHC 1 cut(s) 778
MlsI TGGCCA 1 cut(s) 438
MluNI TGGCCA 1 cut(s) 438
MlyI GAGTC 1 cut(s) 1565
MmeI TCCRAC 2 cut(s) 217, 1428
Mox20I TGGCCA 1 cut(s) 438
MroXI GAANNNNTTC 2 cut(s) 1467, 1543
MscI TGGCCA 1 cut(s) 438
MseI TTAA 2 cut(s) 681, 1316
MslI CAYNNNNRTG 3 cut(s) 722, 961, 1516
Msp20I TGGCCA 1 cut(s) 438
MspA1I CMGCKG 2 cut(s) 316, 1162
MspI CCGG 3 cut(s) 462, 1292, 1608
MspR9I CCNGG 5 cut(s) 690, 806, 996, 1362, 1608
MunI CAATTG 1 cut(s) 827
MvaI CCWGG 4 cut(s) 690, 806, 996, 1362
MvnI CGCG 1 cut(s) 352
NciI CCSGG 1 cut(s) 1608
NcoI CCATGG 1 cut(s) 717
NdeII GATC 5 cut(s) 335, 737, 1322, 1465, 1743
NlaIII CATG 4 cut(s) 331, 349, 721, 1521
NlaIV GGNNCC 4 cut(s) 460, 739, 775, 1771
NmuCI GTSAC 1 cut(s) 1504
NsbI TGCGCA 1 cut(s) 609
NspI RCATGY 2 cut(s) 331, 1521
OliI CACNNNNGTG 1 cut(s) 961
PaeI GCATGC 1 cut(s) 331
PdmI GAANNNNTTC 2 cut(s) 1467, 1543
PfeI GAWTC 4 cut(s) 364, 1451, 1499, 1700
PfoI TCCNGGA 2 cut(s) 688, 1606
Ple19I CGATCG 1 cut(s) 338
PleI GAGTC 1 cut(s) 1564
PpsI GAGTC 1 cut(s) 1564
PsiI TTATAA 1 cut(s) 98
Psp1406I AACGTT 1 cut(s) 1672
Psp6I CCWGG 4 cut(s) 688, 804, 994, 1360
PspEI GGTNACC 1 cut(s) 1757
PspFI CCCAGC 2 cut(s) 142, 834
PspGI CCWGG 4 cut(s) 688, 804, 994, 1360
PspN4I GGNNCC 4 cut(s) 460, 739, 775, 1771
PspPI GGNCC 1 cut(s) 992
PstI CTGCAG 3 cut(s) 321, 1167, 1845
PstNI CAGNNNCTG 3 cut(s) 995, 1054, 1840
PsuI RGATCY 2 cut(s) 737, 1465
PvuI CGATCG 1 cut(s) 338
PvuII CAGCTG 2 cut(s) 316, 1162
RgaI GCGATCGC 1 cut(s) 338
RsaI GTAC 6 cut(s) 673, 1122, 1290, 1351, 1634, 1662
RsaNI GTAC 6 cut(s) 672, 1121, 1289, 1350, 1633, 1661
RseI CAYNNNNRTG 3 cut(s) 722, 961, 1516
SaqAI TTAA 2 cut(s) 681, 1316
Sau3AI GATC 5 cut(s) 335, 737, 1322, 1465, 1743
Sau96I GGNCC 1 cut(s) 992
SchI GAGTC 1 cut(s) 1565
ScrFI CCNGG 5 cut(s) 690, 806, 996, 1362, 1608
SduI GDGCHC 1 cut(s) 778
SfaAI GCGATCGC 1 cut(s) 338
SfaNI GCATC 8 cut(s) 930, 1084, 1177, 1272, 1324, 1352, 1680, 1827
SfcI CTRYAG 3 cut(s) 317, 1163, 1841
SgfI GCGATCGC 1 cut(s) 338
SmiMI CAYNNNNRTG 3 cut(s) 722, 961, 1516
SphI GCATGC 1 cut(s) 331
SspMI CTAG 1 cut(s) 779
StyD4I CCNGG 5 cut(s) 688, 804, 994, 1360, 1606
StyI CCWWGG 6 cut(s) 667, 717, 1277, 1378, 1560, 1795
TaaI ACNGT 6 cut(s) 235, 963, 1107, 1146, 1809, 1857
TaiI ACGT 1 cut(s) 1675
TaqI TCGA 2 cut(s) 305, 1091
TatI WGTACW 2 cut(s) 1120, 1660
TauI GCSGC 5 cut(s) 355, 570, 628, 813, 1264
TfiI GAWTC 4 cut(s) 364, 1451, 1499, 1700
Tru1I TTAA 2 cut(s) 681, 1316
Tru9I TTAA 2 cut(s) 681, 1316
TscAI CASTG 1 cut(s) 968
TseFI GTSAC 1 cut(s) 1504
Tsp45I GTSAC 1 cut(s) 1504
TspDTI ATGAA 5 cut(s) 908, 996, 1050, 1109, 1483
TspGWI ACGGA 2 cut(s) 939, 1702
TspRI CASTG 1 cut(s) 968
XapI RAATTY 4 cut(s) 307, 468, 946, 1270
XceI RCATGY 2 cut(s) 331, 1521
XcmI CCANNNNNNNNNTGG 1 cut(s) 238
XmnI GAANNNNTTC 2 cut(s) 1467, 1543
XspI CTAG 1 cut(s) 779
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.