Prupe.3G042400_v2.0.a1

Transcription initiation factor TFIID subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
3016383 .. 3022559
6177 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G042400.1

Sequence Viewer

Length: 1908 bp
ATGGCTGAAAGTGGCCCATCTTCATCCCCAAAACCCCTGCAACCCTCAAACCCCAACAGCATTGACCCAACTGCAGCATCAACAGCAGCAGCCACAAACATTATAATTAACCAAAACCCATCAAACTCTTCCGCAAACCCACCAATTCCATCCCCTTCAGCTCTCGCCCAATCTCCTCAAATCTCATCCCCTCCCCTCCCTCCTTTGTCCAACATCTCTCTCCCTCAAAACCAGCATATTACACCCACTGTTGGATTAGATTACACGCAAAAATTGAACCAACAGCAGCAGCAACAGCAATCTCAGTCATTGGTGCAACAATCCCAGAATGTGAATGTGAATTCCATGTCCAATTACCAGCTCCAGCAGACCCTGCAGAGGTCTACTTCGATGTCCCGAGTGAACCAACTTCAGCAACAGACTCAGAACCAGCAGCAGCAGCAGCATTTTGGTATGATGAGGCAGCAGGGGGGTTCGTATCCGCAGGTGAATTTTGGTGGCTCCGGTGCTATTCAACAGCAGAATCAGCTGCAACAGCAAAACCAGCCACAGCAGTCGCAGCAACAAATTGGTGGCGGAAACTTGTCGCGATCTGCTTTGATGGCGCAGAGTGGCCACTTACCCATGTTGTCTAGCGCTGCTGCTGTGGCAGCTGCACAATTCAATCTGCAGCCGCAGATGTTGGCCTCGCCGAGACAAAAAGGTGGGCTCGTCCAAGGTTCCCAGTTTCATGCAGGTAATTCTCCTGCGCAATCTTTACAAGGGACACAAGCAATGGGGATGATGGGATCCATCAATTTAAGTTCTCAACTAAGAGCTAATGGGGCGCTCGCCTCTTTTGCTCAACAGAGAATGAATTCGGGCCAACTTAGGCAACAATTGGCCCAACAAAGTTCTCTCACCTCTGCACAGGTTCAGAGCTTGCCAAGAACACCTTCACTTGCATTTATGAACCCCCAGCCATCTGGGATGACTCAGAATGGACAGCCAGCGATGGTGCAGAATTCTTTATCACAACAGTGGTTCAAGCAAATGCCAACCATTTCTGGCACTGGCTCACCTTCATTCCGTCTTCAACAGCAGAGGCAGCAACAGGTTCTCTATCAGCAGCAGTTGGCTTCGCAAAAGTCTATGCCCTTGAACCAGCAACAGTTATCCCAGCTTGTACAGCAGCAGCAACAACTGAGCCATCCACAGCTCCAACAGCAACAGCAACAGCAACTGCAGCAGCTGCCGCAGCATCAACAACAGCAGCAGCAAATACAGCAACAATCACAGCAACAGCCCTTGAATCAGCAGCAGCAGAACTCCCCGAGAATGGCTGTACCTGCAGGCCAGAAATCTCTTAGTTTAACAGGATCACAGCCTGATGCTACTGCATCTGGTACAACTACACCAGGAGGAAGTTCAAGCCAAGGAACAGAAGCAACTAACCAACTTCTTGGGAAGAGAAAGATACAAGATTTAGTCTCTCAGATTGATTCACAGGGAAGGCTGGATCCTGAAGTTGAAGATCTTCTCTTGGAGATTGCTGATGACTTCATTGATTCTGTGACAACATATGCATGCAATTTGGCAAAGCATAGAAAATCTTCAACGTTGGAGTCCAAGGATGTGTTGCTACACCTAGAGAAAAATTGGAATTTGACAATTCCTGGATTTTCAAGTGAAGAGAGGAAGTACCAAAACAAATCTTTGTCAAGTGATCTACACAAGAAGCGTTTAGATATGATACGGACGCTGATGGAATCATCGCACCTGGAAACGAATACCAATAATCCTAAAGAGATGATGAGAGGGTTTGGCAATCCAGTTGGTGCCAACCACTTAAGACCTTCACTTGGTGCAGAACAGTTGGTTTCACAATCAACTGGTTCTCAAATGCTGCAGCAAATGACGCGATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000124 GO:0000125 GO:0000428 GO:0001085 GO:0001101 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010104 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010646 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0023051 GO:0023052 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032870 GO:0032991 GO:0033276 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070297 GO:0070461 GO:0070887 GO:0070897 GO:0071229 GO:0071310 GO:0071368 GO:0071395 GO:0071495 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902493 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1905368 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

636

Amino Acids

69.43

Weight (kDa)

9.88

Isoelectric Point (pI)

75.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010142)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 104
AarI CACCTGC 1 cut(s) 475
Acc16I TGCGCA 1 cut(s) 750
Acc36I ACCTGC 3 cut(s) 475, 725, 1336
AccB1I GGYRCC 1 cut(s) 1817
AccI GTMKAC 1 cut(s) 383
AccII CGCG 2 cut(s) 589, 1900
AciI CCGC 5 cut(s) 132, 482, 576, 674, 1235
AclI AACGTT 1 cut(s) 1598
AclWI GGATC 5 cut(s) 783, 796, 1366, 1493, 1506
AcoI YGGCCR 1 cut(s) 613
AcsI RAATTY 5 cut(s) 340, 490, 856, 1003, 1642
AcuI CTGAAG 3 cut(s) 141, 395, 1524
AdeI CACNNNGTG 1 cut(s) 1844
AfaI GTAC 4 cut(s) 1167, 1326, 1387, 1682
AfeI AGCGCT 1 cut(s) 637
AfiI CCNNNNNNNGG 4 cut(s) 251, 378, 1318, 1841
AflII CTTAAG 1 cut(s) 1828
AjnI CCWGG 3 cut(s) 1396, 1654, 1758
AjuI GAANNNNNNNTTGG 2 cut(s) 919, 951
AleI CACNNNNGTG 1 cut(s) 1018
AluBI AGCT 9 cut(s) 161, 361, 529, 653, 818, 921, 1162, 1198, 1231
AluI AGCT 9 cut(s) 161, 361, 529, 653, 818, 921, 1162, 1198, 1231
Alw26I GTCTC 2 cut(s) 688, 1474
AlwI GGATC 5 cut(s) 783, 796, 1366, 1493, 1506
AlwNI CAGNNNCTG 3 cut(s) 373, 1222, 1231
Ama87I CYCGRG 2 cut(s) 396, 1312
Aor51HI AGCGCT 1 cut(s) 637
AoxI GGCC 6 cut(s) 13, 613, 684, 862, 882, 1333
ApoI RAATTY 5 cut(s) 340, 490, 856, 1003, 1642
Asp700I GAANNNNTTC 4 cut(s) 856, 934, 1515, 1591
AspLEI GCGC 4 cut(s) 607, 638, 751, 829
AspS9I GGNCC 3 cut(s) 14, 862, 883
AsuHPI GGTGA 3 cut(s) 499, 892, 1050
AvaI CYCGRG 2 cut(s) 396, 1312
BalI TGGCCA 1 cut(s) 615
BamHI GGATCC 2 cut(s) 788, 1498
BanI GGYRCC 1 cut(s) 1817
BanII GRGCYC 1 cut(s) 711
BbsI GAAGAC 1 cut(s) 1064
BciT130I CCWGG 3 cut(s) 1398, 1656, 1760
BciVI GTATCC 1 cut(s) 489
BcoDI GTCTC 2 cut(s) 688, 1474
BfaI CTAG 2 cut(s) 633, 1628
BfmI CTRYAG 6 cut(s) 72, 374, 668, 1223, 1329, 1886
BfoI RGCGCY 2 cut(s) 639, 830
BfrI CTTAAG 1 cut(s) 1828
BfuAI ACCTGC 3 cut(s) 475, 725, 1336
BfuI GTATCC 1 cut(s) 489
BglII AGATCT 1 cut(s) 1513
Bme1390I CCNGG 3 cut(s) 1398, 1656, 1760
BmeT110I CYCGRG 2 cut(s) 396, 1312
BmgT120I GGNCC 3 cut(s) 14, 862, 883
BmiI GGNNCC 5 cut(s) 502, 721, 790, 1500, 1819
BmrFI CCNGG 3 cut(s) 1398, 1656, 1760
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 4 cut(s) 86, 1249, 1360, 1388
BmuI ACTGGG 1 cut(s) 718
BpiI GAAGAC 1 cut(s) 1064
BpmI CTGGAG 1 cut(s) 347
BsaJI CCNNGG 3 cut(s) 715, 1414, 1608
BsaWI WCCGGW 1 cut(s) 503
Bsc4I CCNNNNNNNGG 4 cut(s) 251, 378, 1318, 1841
Bse1I ACTGG 4 cut(s) 724, 1057, 1811, 1876
Bse3DI GCAATG 1 cut(s) 780
BseBI CCWGG 3 cut(s) 1398, 1656, 1760
BseDI CCNNGG 3 cut(s) 715, 1414, 1608
BseGI GGATG 7 cut(s) 23, 149, 185, 786, 975, 1189, 1618
BseLI CCNNNNNNNGG 4 cut(s) 251, 378, 1318, 1841
BseMI GCAATG 1 cut(s) 780
BseMII CTCAG 5 cut(s) 317, 437, 989, 1175, 1487
BseNI ACTGG 4 cut(s) 724, 1057, 1811, 1876
BseRI GAGGAG 1 cut(s) 165
BseYI CCCAGC 2 cut(s) 957, 1158
BsgI GTGCAG 4 cut(s) 639, 891, 1019, 1866
Bsh1236I CGCG 2 cut(s) 589, 1900
BshFI GGCC 6 cut(s) 15, 615, 686, 864, 884, 1335
BshNI GGYRCC 1 cut(s) 1817
BsiHKCI CYCGRG 2 cut(s) 396, 1312
BsiSI CCGG 1 cut(s) 504
BslFI GGGAC 2 cut(s) 379, 778
BslI CCNNNNNNNGG 4 cut(s) 251, 378, 1318, 1841
BsmAI GTCTC 2 cut(s) 688, 1474
BsmFI GGGAC 2 cut(s) 379, 778
BsnI GGCC 6 cut(s) 15, 615, 686, 864, 884, 1335
BsoBI CYCGRG 2 cut(s) 396, 1312
Bsp1286I GDGCHC 1 cut(s) 711
Bsp1407I TGTACA 1 cut(s) 1165
Bsp143I GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
Bsp68I TCGCGA 1 cut(s) 589
BspACI CCGC 5 cut(s) 132, 482, 576, 674, 1235
BspANI GGCC 6 cut(s) 15, 615, 686, 864, 884, 1335
BspCNI CTCAG 5 cut(s) 316, 436, 988, 1176, 1486
BspFNI CGCG 2 cut(s) 589, 1900
BspLI GGNNCC 5 cut(s) 502, 721, 790, 1500, 1819
BspMAI CTGCAG 6 cut(s) 76, 378, 672, 1227, 1333, 1890
BspMI ACCTGC 3 cut(s) 475, 725, 1336
BspPI GGATC 5 cut(s) 783, 796, 1366, 1493, 1506
BspT107I GGYRCC 1 cut(s) 1817
BspTI CTTAAG 1 cut(s) 1828
BsrDI GCAATG 1 cut(s) 780
BsrGI TGTACA 1 cut(s) 1165
BsrI ACTGG 4 cut(s) 724, 1057, 1811, 1876
BssECI CCNNGG 3 cut(s) 715, 1414, 1608
BssMI GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
BssT1I CCWWGG 3 cut(s) 715, 1414, 1608
Bst2UI CCWGG 3 cut(s) 1398, 1656, 1760
Bst4CI ACNGT 4 cut(s) 250, 1020, 1152, 1854
Bst6I CTCTTC 3 cut(s) 133, 1442, 1665
BstAFI CTTAAG 1 cut(s) 1828
BstAPI GCANNNNNTGC 2 cut(s) 373, 1231
BstAUI TGTACA 1 cut(s) 1165
BstC8I GCNNGC 5 cut(s) 831, 923, 990, 1333, 1567
BstDEI CTNAG 8 cut(s) 303, 423, 812, 869, 975, 1184, 1346, 1473
BstF5I GGATG 7 cut(s) 23, 149, 185, 786, 975, 1189, 1618
BstFNI CGCG 2 cut(s) 589, 1900
BstH2I RGCGCY 2 cut(s) 639, 830
BstHHI GCGC 4 cut(s) 607, 638, 751, 829
BstKTI GATC 6 cut(s) 593, 791, 1361, 1501, 1516, 1708
BstMAI GTCTC 2 cut(s) 688, 1474
BstMBI GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
BstNI CCWGG 3 cut(s) 1398, 1656, 1760
BstNSI RCATGY 1 cut(s) 1569
BstSCI CCNGG 3 cut(s) 1396, 1654, 1758
BstSFI CTRYAG 6 cut(s) 72, 374, 668, 1223, 1329, 1886
BstUI CGCG 2 cut(s) 589, 1900
BstV2I GAAGAC 1 cut(s) 1064
BstX2I RGATCY 3 cut(s) 788, 1498, 1513
BstXI CCANNNNNNTGG 2 cut(s) 965, 1442
BstYI RGATCY 3 cut(s) 788, 1498, 1513
BsuI GTATCC 1 cut(s) 489
BsuRI GGCC 6 cut(s) 15, 615, 686, 864, 884, 1335
BtgZI GCGATG 2 cut(s) 1007, 1737
BtsCI GGATG 7 cut(s) 23, 149, 185, 786, 975, 1189, 1618
BtsIMutI CAGTG 3 cut(s) 246, 1025, 1050
BtuMI TCGCGA 1 cut(s) 589
BveI ACCTGC 3 cut(s) 475, 725, 1336
Cac8I GCNNGC 5 cut(s) 831, 923, 990, 1333, 1567
CaiI CAGNNNCTG 3 cut(s) 373, 1222, 1231
CfoI GCGC 4 cut(s) 607, 638, 751, 829
Cfr13I GGNCC 3 cut(s) 14, 862, 883
CseI GACGC 1 cut(s) 1747
Csp6I GTAC 4 cut(s) 1166, 1325, 1386, 1681
CviAII CATG 4 cut(s) 346, 625, 731, 1566
CviQI GTAC 4 cut(s) 1166, 1325, 1386, 1681
DdeI CTNAG 8 cut(s) 303, 423, 812, 869, 975, 1184, 1346, 1473
DpnI GATC 6 cut(s) 592, 790, 1360, 1500, 1515, 1707
DpnII GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
DraIII CACNNNGTG 1 cut(s) 1844
EaeI YGGCCR 1 cut(s) 613
Eam1104I CTCTTC 3 cut(s) 133, 1442, 1665
EarI CTCTTC 3 cut(s) 133, 1442, 1665
EciI GGCGGA 1 cut(s) 591
Eco130I CCWWGG 3 cut(s) 715, 1414, 1608
Eco24I GRGCYC 1 cut(s) 711
Eco47III AGCGCT 1 cut(s) 637
Eco57I CTGAAG 3 cut(s) 141, 395, 1524
Eco88I CYCGRG 2 cut(s) 396, 1312
EcoRI GAATTC 3 cut(s) 340, 856, 1003
EcoRII CCWGG 3 cut(s) 1396, 1654, 1758
EcoT14I CCWWGG 3 cut(s) 715, 1414, 1608
EcoT22I ATGCAT 1 cut(s) 1567
EcoT38I GRGCYC 1 cut(s) 711
ErhI CCWWGG 3 cut(s) 715, 1414, 1608
FaeI CATG 4 cut(s) 349, 628, 734, 1569
FalI AAGNNNNNCTT 2 cut(s) 919, 951
FaqI GGGAC 2 cut(s) 379, 778
FatI CATG 4 cut(s) 345, 624, 730, 1565
FauNDI CATATG 1 cut(s) 1561
FblI GTMKAC 1 cut(s) 383
FokI GGATG 7 cut(s) 10, 136, 172, 793, 982, 1176, 1625
FriOI GRGCYC 1 cut(s) 711
FspBI CTAG 2 cut(s) 633, 1628
FspI TGCGCA 1 cut(s) 750
GlaI GCGC 4 cut(s) 606, 637, 750, 828
GsaI CCCAGC 2 cut(s) 961, 1162
GsuI CTGGAG 1 cut(s) 347
HaeII RGCGCY 2 cut(s) 639, 830
HaeIII GGCC 6 cut(s) 15, 615, 686, 864, 884, 1335
HapII CCGG 1 cut(s) 504
HgaI GACGC 1 cut(s) 1747
HhaI GCGC 4 cut(s) 607, 638, 751, 829
Hin1II CATG 4 cut(s) 349, 628, 734, 1569
Hin6I GCGC 4 cut(s) 605, 636, 749, 827
HinP1I GCGC 4 cut(s) 605, 636, 749, 827
HinfI GANTC 9 cut(s) 421, 523, 973, 1291, 1481, 1547, 1604, 1748, 1902
HpaII CCGG 1 cut(s) 504
HphI GGTGA 3 cut(s) 499, 892, 1050
Hpy166II GTNNAC 2 cut(s) 384, 403
Hpy188I TCNGA 4 cut(s) 426, 918, 978, 1476
Hpy188III TCNNGA 3 cut(s) 396, 588, 1502
Hpy8I GTNNAC 2 cut(s) 384, 403
HpyAV CCTTC 5 cut(s) 165, 945, 1071, 1485, 1845
HpyCH4III ACNGT 4 cut(s) 250, 1020, 1152, 1854
HpyCH4IV ACGT 1 cut(s) 1598
HpyF3I CTNAG 8 cut(s) 303, 423, 812, 869, 975, 1184, 1346, 1473
HpySE526I ACGT 1 cut(s) 1598
Hsp92II CATG 4 cut(s) 349, 628, 734, 1569
HspAI GCGC 4 cut(s) 605, 636, 749, 827
Kzo9I GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
LmnI GCTCC 3 cut(s) 366, 506, 1203
LweI GCATC 4 cut(s) 86, 1249, 1360, 1388
MaeI CTAG 2 cut(s) 633, 1628
MaeII ACGT 1 cut(s) 1598
MaeIII GTNAC 1 cut(s) 1552
MalI GATC 6 cut(s) 592, 790, 1360, 1500, 1515, 1707
MboI GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
MboII GAAGA 8 cut(s) 12, 120, 1064, 1459, 1508, 1523, 1584, 1682
MfeI CAATTG 1 cut(s) 878
MflI RGATCY 3 cut(s) 788, 1498, 1513
MhlI GDGCHC 1 cut(s) 711
MlsI TGGCCA 1 cut(s) 615
MluNI TGGCCA 1 cut(s) 615
MlyI GAGTC 3 cut(s) 415, 967, 1613
MmeI TCCRAC 4 cut(s) 232, 234, 1225, 1581
Mox20I TGGCCA 1 cut(s) 615
Mph1103I ATGCAT 1 cut(s) 1567
MroXI GAANNNNTTC 4 cut(s) 856, 934, 1515, 1591
MscI TGGCCA 1 cut(s) 615
MseI TTAA 4 cut(s) 108, 800, 1352, 1829
MslI CAYNNNNRTG 2 cut(s) 1018, 1564
Msp20I TGGCCA 1 cut(s) 615
MspA1I CMGCKG 3 cut(s) 529, 653, 1231
MspCI CTTAAG 1 cut(s) 1828
MspI CCGG 1 cut(s) 504
MspR9I CCNGG 3 cut(s) 1398, 1656, 1760
MunI CAATTG 1 cut(s) 878
MvaI CCWGG 3 cut(s) 1398, 1656, 1760
MvnI CGCG 2 cut(s) 589, 1900
NdeI CATATG 1 cut(s) 1561
NdeII GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
NlaIII CATG 4 cut(s) 349, 628, 734, 1569
NlaIV GGNNCC 5 cut(s) 502, 721, 790, 1500, 1819
NmeAIII GCCGAG 1 cut(s) 717
NmuCI GTSAC 1 cut(s) 1552
NruI TCGCGA 1 cut(s) 589
NsbI TGCGCA 1 cut(s) 750
NsiI ATGCAT 1 cut(s) 1567
NspI RCATGY 1 cut(s) 1569
OliI CACNNNNGTG 1 cut(s) 1018
PaeI GCATGC 1 cut(s) 1569
PaqCI CACCTGC 1 cut(s) 475
PdmI GAANNNNTTC 4 cut(s) 856, 934, 1515, 1591
PfeI GAWTC 6 cut(s) 523, 1291, 1481, 1547, 1748, 1902
PfoI TCCNGGA 1 cut(s) 1654
PleI GAGTC 3 cut(s) 415, 967, 1612
PpsI GAGTC 3 cut(s) 415, 967, 1612
PsiI TTATAA 1 cut(s) 104
Psp1406I AACGTT 1 cut(s) 1598
Psp6I CCWGG 3 cut(s) 1396, 1654, 1758
PspFI CCCAGC 2 cut(s) 957, 1158
PspGI CCWGG 3 cut(s) 1396, 1654, 1758
PspN4I GGNNCC 5 cut(s) 502, 721, 790, 1500, 1819
PspPI GGNCC 3 cut(s) 14, 862, 883
PstI CTGCAG 6 cut(s) 76, 378, 672, 1227, 1333, 1890
PstNI CAGNNNCTG 3 cut(s) 373, 1222, 1231
PsuI RGATCY 3 cut(s) 788, 1498, 1513
PvuII CAGCTG 3 cut(s) 529, 653, 1231
RruI TCGCGA 1 cut(s) 589
RsaI GTAC 4 cut(s) 1167, 1326, 1387, 1682
RsaNI GTAC 4 cut(s) 1166, 1325, 1386, 1681
RseI CAYNNNNRTG 2 cut(s) 1018, 1564
SaqAI TTAA 4 cut(s) 108, 800, 1352, 1829
Sau3AI GATC 6 cut(s) 590, 788, 1358, 1498, 1513, 1705
Sau96I GGNCC 3 cut(s) 14, 862, 883
SbfI CCTGCAGG 1 cut(s) 1333
SchI GAGTC 3 cut(s) 415, 967, 1613
ScrFI CCNGG 3 cut(s) 1398, 1656, 1760
SdaI CCTGCAGG 1 cut(s) 1333
SduI GDGCHC 1 cut(s) 711
SfaNI GCATC 4 cut(s) 86, 1249, 1360, 1388
SfcI CTRYAG 6 cut(s) 72, 374, 668, 1223, 1329, 1886
SmiMI CAYNNNNRTG 2 cut(s) 1018, 1564
SmlI CTYRAG 1 cut(s) 1828
SmoI CTYRAG 1 cut(s) 1828
SphI GCATGC 1 cut(s) 1569
Sse8387I CCTGCAGG 1 cut(s) 1333
SsiI CCGC 5 cut(s) 132, 482, 576, 674, 1235
SspMI CTAG 2 cut(s) 633, 1628
StyD4I CCNGG 3 cut(s) 1396, 1654, 1758
StyI CCWWGG 3 cut(s) 715, 1414, 1608
TaaI ACNGT 4 cut(s) 250, 1020, 1152, 1854
TaiI ACGT 1 cut(s) 1601
TaqI TCGA 1 cut(s) 389
TatI WGTACW 1 cut(s) 1165
TauI GCSGC 2 cut(s) 676, 1237
TfiI GAWTC 6 cut(s) 523, 1291, 1481, 1547, 1748, 1902
Tru1I TTAA 4 cut(s) 108, 800, 1352, 1829
Tru9I TTAA 4 cut(s) 108, 800, 1352, 1829
TscAI CASTG 3 cut(s) 253, 1025, 1057
TseFI GTSAC 1 cut(s) 1552
Tsp45I GTSAC 1 cut(s) 1552
TspDTI ATGAA 6 cut(s) 12, 719, 869, 965, 1053, 1531
TspGWI ACGGA 2 cut(s) 1058, 1750
TspRI CASTG 3 cut(s) 253, 1025, 1057
Vha464I CTTAAG 1 cut(s) 1828
XapI RAATTY 5 cut(s) 340, 490, 856, 1003, 1642
XceI RCATGY 1 cut(s) 1569
XmiI GTMKAC 1 cut(s) 383
XmnI GAANNNNTTC 4 cut(s) 856, 934, 1515, 1591
XspI CTAG 2 cut(s) 633, 1628
Zsp2I ATGCAT 1 cut(s) 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.