RchiOBHm_Chr2g0145171

Transcription initiation factor TFIID subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0010142
Physical Location & Seq
Forward (+)
62772332 .. 62778124
5793 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51503

Sequence Viewer

Length: 1845 bp
ATGGCCGATAGTGGCTCATCTCCATCCCAAAAACCCCCAAACCCCAATAGCATTGAAGCATCAACAGCAGCCACCCCTAACATTATAATCACCCAAAACCCATCAAACTCCACCTCAAACCCACCAATCCCATCCCCGCAACCTCCTCAAATCTCATCCCCACCCCTCCCTCCTCTCCCCCAGAACCAACAGCTTATTTCCCCCACCGTCGGATTGGATTACACCCAGAAACCGAATCAGCTGCAGCAGCCATTGGTGCAGCAACAAGTGCAGACTCAGAATGTAAATGTGAACGCCATGTCGAATTTCCAGCTGCAGCAGCAGCAGAGCATGCAGCGATCTCCGTCGATGTCGCGGCTGAACCAAATTCAGCAGCAGCAGAATCAGAACCAGAACCAGAGCCAGCAGCAGCAGCATTTCGGCATGATGAGGCAGCAAAGCAATTTGTATAGCCAGGTCAATTTCGGAGGCTCCGGTGCGATTCAGCAGCAGAGCCAGACTCAGCAGCAGCAAATTGGCGGGGGCAACTTGCCCCGAGCTGCCCTGCTTGGCCAGAGTGGCCACTTGCCCATGCTGTCTGGTGCTAACGCAGCTGCGCAATTCAGTATGCAGACGCAGCTGTTGGCTTCGCCGAGACAACAAGGCGGGTTAGTCCAAGGTACCCAATTTAGTTCTCCTGGACAATCTCTACAAGGAACACAAGCAATGGGTATGGGAATGATGAATTCCATTAATTTGACCCCACAACCAAGAGCTAATGGAGCCTTAGCTGCTTATGCTCAGCGATTCAACCAGGGCCAACTTAGACAACAATTGTCCCAGCAAAGTTCGCTCGCCTCTCCGCAAAACTTGCCAAGAACATCCTCACTTGCATTTATGAGCACTCAGCTATCTGGGCTGGCTCAGAATGGACAGCCAGCTATGATACAGAATCCTTTATCACAACAGTGGTTGAAGCAAATGCCAGCAATTTCAGGCCCTGGCTCACCTTCATACCGCCTTCAACAACATAGGCAGCAGGCCATCTTCCAGCAGCAACTGTCTTCACCCACTCAGTTGCATCAACAGCCTATGCCCATGAAACAGCAAAAACAGTTACAGCAACAGCAGCAGCAGCAGCAGCAACAATTGGGGCTTCCTCAACTACAGCATCAACAACAGCAACAGCAGCAGCAAATGCAGCAGCCACTACAACAACAATCACAGCAACAACAGCCCTTCAATCAACAACAGCAGCAGACTTCCCCAAGGATGCCTGTACCCGCAGGCCAGAAATCTCTTAGTTTAACAGGATCACAGCCTGATGCTACTGCATCTGGTACAACTACACCAGGAGGGAGTTCAAGCCAAGGAACAGAAGCAACTAACCAACTTCTTGGGAAGAGAAAGATGCAGGACTTAGTCTCACAGGTTGATTCACAGGGAAGGTTGGATTCTGAAGTTGAAGATCTTCTTTTGGAGATTGCTGATGACTTCATTGATTCAGTGACTACATTTGCATGCAGTTTGGCTAAGCATAGAAAATCTTCAACTTTAGAGTCCAAGGATGTGTTGCTGCACTTAGAAAAAAATTGGCATTTGACAATTCCCGGATTTTCAAGTGAAGAGAGGAAGTACCAAAACAAATCTTTGTCAAGTGACGTACATAAGAAACGTTTAGATATGATACGGACGCTGATGGAATCATCGCACCTGGAAACAAATACTAATAATCCTAAGGAGGTGATCAGAGGGTATGGCAACCCAGTTGGTGCCAACCACTTGATAAGACCTTCCCTTGGTTCAGAACAGTTGGTTTCCCAAGCAGCTGGTTCTCAGATGCTGCAGCAGATAACACGGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000123 GO:0000124 GO:0000125 GO:0000428 GO:0001085 GO:0001101 GO:0001102 GO:0003674 GO:0003676 GO:0003677 GO:0003712 GO:0003713 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0005669 GO:0006139 GO:0006325 GO:0006351 GO:0006352 GO:0006355 GO:0006366 GO:0006367 GO:0006464 GO:0006473 GO:0006475 GO:0006725 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010104 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010646 GO:0016043 GO:0016070 GO:0016569 GO:0016570 GO:0016573 GO:0016591 GO:0017025 GO:0018130 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0022607 GO:0023051 GO:0023052 GO:0030880 GO:0030914 GO:0031248 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032774 GO:0032870 GO:0032991 GO:0033276 GO:0033613 GO:0034622 GO:0034641 GO:0034645 GO:0034654 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043933 GO:0043966 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0045935 GO:0046483 GO:0048518 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051123 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051716 GO:0055029 GO:0060255 GO:0061695 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070013 GO:0070297 GO:0070461 GO:0070887 GO:0070897 GO:0071229 GO:0071310 GO:0071368 GO:0071395 GO:0071495 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090575 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902493 GO:1902494 GO:1902531 GO:1902680 GO:1903506 GO:1903508 GO:1905368 GO:1990234 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03022 map03022
Pfam Domains
Protein Families
TFIID_20kDa

Protein Analysis

614

Amino Acids

67.44

Weight (kDa)

9.88

Isoelectric Point (pI)

74.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TFIID_20kDa PF03847 460 - 527 7.1e-32 Transcription initiation factor TFIID subunit A
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010142)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17440 AT1G17440
fragaria_vesca FvH4_6g34640 FvH4_6g34640
malus_domestica MD09G1184100.v1.1 MD17G1168400.v1.1
prunus_persica Prupe.3G042400_v2.0.a1
pyrus_communis pycom09g10180 pycom17g16450
rosa_chinensis RchiOBHm_Chr2g0145171
rosa_laevigata RLG00000020131
rosa_multiflora Rmu_sc0002506.1_g000036
rosa_roxburghii Rroxscaffold_2G00100820
rosa_rugosa Rorug02G0390800 Rorug02G0390800 Rorug02G0390900
rosa_samantha Rh2AG443500 Rh2BG454500 Rh2CG430500 Rh2DG464400
rosa_wichuraiana Rw2G036270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 86
Acc16I TGCGCA 1 cut(s) 597
Acc65I GGTACC 1 cut(s) 659
AccB1I GGYRCC 2 cut(s) 659, 1751
AccII CGCG 1 cut(s) 355
AciI CCGC 7 cut(s) 137, 355, 519, 645, 842, 997, 1263
AclI AACGTT 1 cut(s) 1654
AclWI GGATC 1 cut(s) 1300
AcoI YGGCCR 3 cut(s) 3, 550, 559
AcsI RAATTY 3 cut(s) 304, 366, 724
AcuI CTGAAG 1 cut(s) 1458
AfaI GTAC 5 cut(s) 661, 1260, 1321, 1616, 1644
AfiI CCNNNNNNNGG 2 cut(s) 209, 1778
AgsI TTSAA 9 cut(s) 56, 790, 955, 1004, 1222, 1344, 1445, 1530, 1599
AjnI CCWGG 6 cut(s) 453, 676, 792, 979, 1330, 1692
AleI CACNNNNGTG 1 cut(s) 946
Alw21I GWGCWC 1 cut(s) 884
Alw26I GTCTC 2 cut(s) 628, 1408
AlwI GGATC 1 cut(s) 1300
AlwNI CAGNNNCTG 3 cut(s) 980, 1039, 1822
Ama87I CYCGRG 1 cut(s) 534
AoxI GGCC 7 cut(s) 3, 550, 559, 796, 976, 1020, 1267
ApoI RAATTY 3 cut(s) 304, 366, 724
AseI ATTAAT 1 cut(s) 732
Asp700I GAANNNNTTC 2 cut(s) 1449, 1525
Asp718I GGTACC 1 cut(s) 659
AspLEI GCGC 1 cut(s) 598
AspS9I GGNCC 2 cut(s) 796, 977
AsuC2I CCSGG 1 cut(s) 1590
AsuHPI GGTGA 4 cut(s) 82, 978, 1038, 1735
AvaI CYCGRG 1 cut(s) 534
AxyI CCTNAGG 1 cut(s) 1716
BalI TGGCCA 2 cut(s) 552, 561
BanI GGYRCC 2 cut(s) 659, 1751
BbsI GAAGAC 1 cut(s) 1035
Bbv12I GWGCWC 1 cut(s) 884
BccI CCATC 5 cut(s) 31, 109, 139, 1031, 1672
BcgI CGANNNNNNTGC 2 cut(s) 223, 257
BciT130I CCWGG 6 cut(s) 455, 678, 794, 981, 1332, 1694
BclI TGATCA 1 cut(s) 1725
BcnI CCSGG 1 cut(s) 1590
BcoDI GTCTC 2 cut(s) 628, 1408
BfmI CTRYAG 4 cut(s) 242, 314, 1145, 1823
BglI GCCNNNNNGGC 1 cut(s) 558
BglII AGATCT 1 cut(s) 1447
BlpI GCTNAGC 2 cut(s) 780, 1512
Bme1390I CCNGG 7 cut(s) 455, 678, 794, 981, 1332, 1590, 1694
BmeT110I CYCGRG 1 cut(s) 534
BmgT120I GGNCC 2 cut(s) 796, 977
BmiI GGNNCC 4 cut(s) 472, 661, 763, 1753
BmrFI CCNGG 7 cut(s) 455, 678, 794, 981, 1332, 1590, 1694
BmrI ACTGGG 1 cut(s) 1739
BmsI GCATC 8 cut(s) 68, 1069, 1159, 1242, 1294, 1322, 1380, 1809
BmuI ACTGGG 1 cut(s) 1739
BpiI GAAGAC 1 cut(s) 1035
BplI GAGNNNNNCTC 2 cut(s) 484, 516
Bpu10I CCTNAGC 1 cut(s) 766
Bpu1102I GCTNAGC 2 cut(s) 780, 1512
BpuMI CCSGG 1 cut(s) 1590
BsaJI CCNNGG 7 cut(s) 655, 793, 979, 1247, 1348, 1542, 1777
BsaWI WCCGGW 1 cut(s) 473
Bsc4I CCNNNNNNNGG 2 cut(s) 209, 1778
Bse1I ACTGG 1 cut(s) 1745
Bse21I CCTNAGG 1 cut(s) 1716
Bse3DI GCAATG 1 cut(s) 711
BseBI CCWGG 6 cut(s) 455, 678, 794, 981, 1332, 1694
BseDI CCNNGG 7 cut(s) 655, 793, 979, 1247, 1348, 1542, 1777
BseGI GGATG 6 cut(s) 23, 131, 155, 860, 1257, 1552
BseLI CCNNNNNNNGG 2 cut(s) 209, 1778
BseMI GCAATG 1 cut(s) 711
BseMII CTCAG 7 cut(s) 290, 515, 794, 899, 917, 1067, 1829
BseNI ACTGG 1 cut(s) 1745
BseRI GAGGAG 2 cut(s) 135, 162
BseYI CCCAGC 1 cut(s) 819
BsgI GTGCAG 3 cut(s) 278, 290, 1541
Bsh1236I CGCG 1 cut(s) 355
BshFI GGCC 7 cut(s) 5, 552, 561, 798, 978, 1022, 1269
BshNI GGYRCC 2 cut(s) 659, 1751
BsiHKAI GWGCWC 1 cut(s) 884
BsiHKCI CYCGRG 1 cut(s) 534
BsiSI CCGG 2 cut(s) 474, 1590
BslFI GGGAC 1 cut(s) 802
BslI CCNNNNNNNGG 2 cut(s) 209, 1778
BsmAI GTCTC 2 cut(s) 628, 1408
BsmFI GGGAC 1 cut(s) 802
BsnI GGCC 7 cut(s) 5, 552, 561, 798, 978, 1022, 1269
BsoBI CYCGRG 1 cut(s) 534
Bsp1286I GDGCHC 1 cut(s) 884
Bsp143I GATC 4 cut(s) 338, 1292, 1447, 1725
Bsp1720I GCTNAGC 2 cut(s) 780, 1512
BspACI CCGC 7 cut(s) 137, 355, 519, 645, 842, 997, 1263
BspANI GGCC 7 cut(s) 5, 552, 561, 798, 978, 1022, 1269
BspCNI CTCAG 7 cut(s) 289, 514, 793, 898, 916, 1066, 1828
BspFNI CGCG 1 cut(s) 355
BspLI GGNNCC 4 cut(s) 472, 661, 763, 1753
BspMAI CTGCAG 3 cut(s) 246, 318, 1827
BspPI GGATC 1 cut(s) 1300
BspT107I GGYRCC 2 cut(s) 659, 1751
BsrDI GCAATG 1 cut(s) 711
BsrI ACTGG 1 cut(s) 1745
BssECI CCNNGG 7 cut(s) 655, 793, 979, 1247, 1348, 1542, 1777
BssMI GATC 4 cut(s) 338, 1292, 1447, 1725
BssT1I CCWWGG 5 cut(s) 655, 1247, 1348, 1542, 1777
Bst2UI CCWGG 6 cut(s) 455, 678, 794, 981, 1332, 1694
Bst4CI ACNGT 6 cut(s) 208, 948, 1041, 1095, 1791, 1839
Bst6I CTCTTC 2 cut(s) 1376, 1599
BstAPI GCANNNNNTGC 4 cut(s) 268, 331, 850, 1177
BstC8I GCNNGC 9 cut(s) 332, 404, 834, 900, 918, 966, 1020, 1267, 1501
BstF5I GGATG 6 cut(s) 23, 131, 155, 860, 1257, 1552
BstFNI CGCG 1 cut(s) 355
BstHHI GCGC 1 cut(s) 598
BstKTI GATC 4 cut(s) 341, 1295, 1450, 1728
BstMAI GTCTC 2 cut(s) 628, 1408
BstMBI GATC 4 cut(s) 338, 1292, 1447, 1725
BstNI CCWGG 6 cut(s) 455, 678, 794, 981, 1332, 1694
BstNSI RCATGY 2 cut(s) 334, 1503
BstSCI CCNGG 7 cut(s) 453, 676, 792, 979, 1330, 1588, 1692
BstSFI CTRYAG 4 cut(s) 242, 314, 1145, 1823
BstUI CGCG 1 cut(s) 355
BstV2I GAAGAC 1 cut(s) 1035
BstX2I RGATCY 1 cut(s) 1447
BstXI CCANNNNNNTGG 2 cut(s) 1376, 1808
BstYI RGATCY 1 cut(s) 1447
Bsu36I CCTNAGG 1 cut(s) 1716
BsuRI GGCC 7 cut(s) 5, 552, 561, 798, 978, 1022, 1269
BtgZI GCGATG 1 cut(s) 1671
BtsCI GGATG 6 cut(s) 23, 131, 155, 860, 1257, 1552
BtsIMutI CAGTG 2 cut(s) 953, 1491
Cac8I GCNNGC 9 cut(s) 332, 404, 834, 900, 918, 966, 1020, 1267, 1501
CaiI CAGNNNCTG 3 cut(s) 980, 1039, 1822
CfoI GCGC 1 cut(s) 598
Cfr13I GGNCC 2 cut(s) 796, 977
CseI GACGC 2 cut(s) 622, 1681
Csp6I GTAC 5 cut(s) 660, 1259, 1320, 1615, 1643
CviAII CATG 6 cut(s) 298, 331, 424, 571, 1078, 1500
CviQI GTAC 5 cut(s) 660, 1259, 1320, 1615, 1643
DpnI GATC 4 cut(s) 340, 1294, 1449, 1727
DpnII GATC 4 cut(s) 338, 1292, 1447, 1725
EaeI YGGCCR 3 cut(s) 3, 550, 559
Eam1104I CTCTTC 2 cut(s) 1376, 1599
EarI CTCTTC 2 cut(s) 1376, 1599
Eco130I CCWWGG 5 cut(s) 655, 1247, 1348, 1542, 1777
Eco57I CTGAAG 1 cut(s) 1458
Eco81I CCTNAGG 1 cut(s) 1716
Eco88I CYCGRG 1 cut(s) 534
EcoO109I RGGNCCY 1 cut(s) 977
EcoRI GAATTC 1 cut(s) 724
EcoRII CCWGG 6 cut(s) 453, 676, 792, 979, 1330, 1692
EcoT14I CCWWGG 5 cut(s) 655, 1247, 1348, 1542, 1777
ErhI CCWWGG 5 cut(s) 655, 1247, 1348, 1542, 1777
FaeI CATG 6 cut(s) 301, 334, 427, 574, 1081, 1503
FalI AAGNNNNNCTT 2 cut(s) 1437, 1469
FaqI GGGAC 1 cut(s) 802
FatI CATG 6 cut(s) 297, 330, 423, 570, 1077, 1499
FauI CCCGC 4 cut(s) 144, 512, 638, 1270
FbaI TGATCA 1 cut(s) 1725
FokI GGATG 6 cut(s) 10, 118, 142, 847, 1264, 1559
FspI TGCGCA 1 cut(s) 597
GlaI GCGC 1 cut(s) 597
GsaI CCCAGC 1 cut(s) 823
HaeIII GGCC 7 cut(s) 5, 552, 561, 798, 978, 1022, 1269
HapII CCGG 2 cut(s) 474, 1590
HgaI GACGC 2 cut(s) 622, 1681
HhaI GCGC 1 cut(s) 598
Hin1II CATG 6 cut(s) 301, 334, 427, 574, 1081, 1503
Hin6I GCGC 1 cut(s) 596
HinP1I GCGC 1 cut(s) 596
HpaII CCGG 2 cut(s) 474, 1590
HphI GGTGA 4 cut(s) 82, 978, 1038, 1735
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 9 cut(s) 212, 279, 387, 467, 906, 1438, 1730, 1786, 1818
Hpy8I GTNNAC 1 cut(s) 292
Hpy99I CGWCG 2 cut(s) 212, 349
HpyAV CCTTC 5 cut(s) 999, 1010, 1228, 1419, 1782
HpyCH4III ACNGT 6 cut(s) 208, 948, 1041, 1095, 1791, 1839
HpyCH4IV ACGT 2 cut(s) 1641, 1654
HpySE526I ACGT 2 cut(s) 1641, 1654
Hsp92II CATG 6 cut(s) 301, 334, 427, 574, 1081, 1503
HspAI GCGC 1 cut(s) 596
KpnI GGTACC 1 cut(s) 663
Ksp22I TGATCA 1 cut(s) 1725
Kzo9I GATC 4 cut(s) 338, 1292, 1447, 1725
LmnI GCTCC 2 cut(s) 476, 761
LweI GCATC 8 cut(s) 68, 1069, 1159, 1242, 1294, 1322, 1380, 1809
MaeII ACGT 2 cut(s) 1641, 1654
MaeIII GTNAC 3 cut(s) 1095, 1486, 1637
MalI GATC 4 cut(s) 340, 1294, 1449, 1727
MboI GATC 4 cut(s) 338, 1292, 1447, 1725
MboII GAAGA 7 cut(s) 1018, 1035, 1393, 1442, 1457, 1518, 1616
MfeI CAATTG 2 cut(s) 812, 1127
MflI RGATCY 1 cut(s) 1447
MhlI GDGCHC 1 cut(s) 884
MlsI TGGCCA 2 cut(s) 552, 561
MluNI TGGCCA 2 cut(s) 552, 561
MlyI GAGTC 3 cut(s) 268, 493, 1547
MmeI TCCRAC 2 cut(s) 190, 1410
Mox20I TGGCCA 2 cut(s) 552, 561
MroXI GAANNNNTTC 2 cut(s) 1449, 1525
MscI TGGCCA 2 cut(s) 552, 561
MseI TTAA 2 cut(s) 732, 1286
MslI CAYNNNNRTG 2 cut(s) 946, 1498
Msp20I TGGCCA 2 cut(s) 552, 561
MspA1I CMGCKG 5 cut(s) 241, 313, 593, 619, 1808
MspI CCGG 2 cut(s) 474, 1590
MspR9I CCNGG 7 cut(s) 455, 678, 794, 981, 1332, 1590, 1694
MunI CAATTG 2 cut(s) 812, 1127
MvaI CCWGG 6 cut(s) 455, 678, 794, 981, 1332, 1694
MvnI CGCG 1 cut(s) 355
NciI CCSGG 1 cut(s) 1590
NdeII GATC 4 cut(s) 338, 1292, 1447, 1725
NlaIII CATG 6 cut(s) 301, 334, 427, 574, 1081, 1503
NlaIV GGNNCC 4 cut(s) 472, 661, 763, 1753
NmeAIII GCCGAG 1 cut(s) 657
NmuCI GTSAC 2 cut(s) 1486, 1637
NsbI TGCGCA 1 cut(s) 597
NspI RCATGY 2 cut(s) 334, 1503
OliI CACNNNNGTG 1 cut(s) 946
PaeI GCATGC 2 cut(s) 334, 1503
PdmI GAANNNNTTC 2 cut(s) 1449, 1525
PfeI GAWTC 9 cut(s) 235, 382, 481, 786, 931, 1415, 1433, 1481, 1682
PflFI GACNNNGTC 1 cut(s) 1400
PfoI TCCNGGA 2 cut(s) 676, 1588
PleI GAGTC 3 cut(s) 268, 493, 1546
PpsI GAGTC 3 cut(s) 268, 493, 1546
PshBI ATTAAT 1 cut(s) 732
PsiI TTATAA 1 cut(s) 86
Psp1406I AACGTT 1 cut(s) 1654
Psp6I CCWGG 6 cut(s) 453, 676, 792, 979, 1330, 1692
PspFI CCCAGC 1 cut(s) 819
PspGI CCWGG 6 cut(s) 453, 676, 792, 979, 1330, 1692
PspN4I GGNNCC 4 cut(s) 472, 661, 763, 1753
PspPI GGNCC 2 cut(s) 796, 977
PstI CTGCAG 3 cut(s) 246, 318, 1827
PstNI CAGNNNCTG 3 cut(s) 980, 1039, 1822
PsuI RGATCY 1 cut(s) 1447
PsyI GACNNNGTC 1 cut(s) 1400
PvuII CAGCTG 5 cut(s) 241, 313, 593, 619, 1808
RsaI GTAC 5 cut(s) 661, 1260, 1321, 1616, 1644
RsaNI GTAC 5 cut(s) 660, 1259, 1320, 1615, 1643
RseI CAYNNNNRTG 2 cut(s) 946, 1498
SaqAI TTAA 2 cut(s) 732, 1286
Sau3AI GATC 4 cut(s) 338, 1292, 1447, 1725
Sau96I GGNCC 2 cut(s) 796, 977
SchI GAGTC 3 cut(s) 268, 493, 1547
ScrFI CCNGG 7 cut(s) 455, 678, 794, 981, 1332, 1590, 1694
SduI GDGCHC 1 cut(s) 884
SfaNI GCATC 8 cut(s) 68, 1069, 1159, 1242, 1294, 1322, 1380, 1809
SfcI CTRYAG 4 cut(s) 242, 314, 1145, 1823
SfiI GGCCNNNNNGGCC 1 cut(s) 558
SmiMI CAYNNNNRTG 2 cut(s) 946, 1498
SphI GCATGC 2 cut(s) 334, 1503
SsiI CCGC 7 cut(s) 137, 355, 519, 645, 842, 997, 1263
StyD4I CCNGG 7 cut(s) 453, 676, 792, 979, 1330, 1588, 1692
StyI CCWWGG 5 cut(s) 655, 1247, 1348, 1542, 1777
TaaI ACNGT 6 cut(s) 208, 948, 1041, 1095, 1791, 1839
TaiI ACGT 2 cut(s) 1644, 1657
TaqI TCGA 2 cut(s) 302, 347
TauI GCSGC 1 cut(s) 358
TfiI GAWTC 9 cut(s) 235, 382, 481, 786, 931, 1415, 1433, 1481, 1682
Tru1I TTAA 2 cut(s) 732, 1286
Tru9I TTAA 2 cut(s) 732, 1286
TscAI CASTG 2 cut(s) 953, 1491
TseFI GTSAC 2 cut(s) 1486, 1637
Tsp45I GTSAC 2 cut(s) 1486, 1637
TspDTI ATGAA 4 cut(s) 737, 981, 1094, 1465
TspGWI ACGGA 2 cut(s) 333, 1684
TspRI CASTG 2 cut(s) 953, 1491
Tth111I GACNNNGTC 1 cut(s) 1400
VspI ATTAAT 1 cut(s) 732
XapI RAATTY 3 cut(s) 304, 366, 724
XceI RCATGY 2 cut(s) 334, 1503
XcmI CCANNNNNNNNNTGG 1 cut(s) 211
XmnI GAANNNNTTC 2 cut(s) 1449, 1525
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.