AT1G19140

Ubiquinone biosynthesis protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0009366
Physical Location & Seq
Reverse (-)
6610652 .. 6612609
1958 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19140.2

Sequence Viewer

Length: 936 bp
ATGTACCGAACGGCGGCGAAGCGTCTTCTCGCCGGTGGTGGAATCACTACCACCCGTCTCCTCCGATTACCGAAGCTCAGGTCTACAATCATCCCTTCCTCTTACACTTCCGGTCTCTGCACTTCGTCGATTGGTGGTAATACTGAATCACCAATGGGTAAGCAGTCTGTGAACCCTAATCAATCGGGTCCAACGGCGTCGTCTTCTACGGGTACAGGGGAAGGACAACGCCGACATGAGAGCAGAAAGCCGAGAGCTGAGTTCCAAGAAGAGCAGGCTCGTGTTCTCTCTGCGTCTCTCCGTCACGTGCCGAGGTTAGGTTGGACGGAAGAAGCGATGATGGCTGGTTCAAGGGATGTTGGTGTGTCTCCTTCGATTGTTGGGTCTTTCTCCAGGAAAGAAGCTGCTCTTGTTGAGTTCTTCATGGATGAATGCCTTCAATTGCTTATGGATAGAATAGACTCTGGATTGGATTTGCAAAATCTGATTCCAAGTGAACGTATCTCCAAGCTCATTAGAATTCGTCTAGAAATGCAAGTCCCTTACATGTCAAAATGGCCCCAAGCTCTTAGCATTCAGGCGCATCCTCTGAATGTCCCAACGAGTTTTAAGCAACGGGCAATGTTAGTTGATGAGATATGGCATGCTGTTGGAGATGGAGCCTCGGATTTAGATTGGTATGTCAAGCGTACTATTCTTGGAGGCGTTTACTCAACTACCGAGATTTACATGCTCACCGATGACTCCTTAGAACATCGCGATACATGGGCATTCTTGGATGACAGAGTCAAAGATGCTTTTGATCTTAAGAAGAGCATACAAGAGGCCAAGTATTTTGCAGAAGACATAGGAGCTGGAGTTGGGAAGTCGGTTCAAGGACTGATGAATGGAGTTATGCAGACAATGTCCAGAAGAAGTGGTGGCTCTGCGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COQ9

Protein Analysis

311

Amino Acids

34.34

Weight (kDa)

8.8

Isoelectric Point (pI)

52.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COQ9_N PF21392 92 - 116 7.7e-06 Ubiquinone biosynthesis protein COQ9, N-terminal domain
COQ9 PF08511 199 - 270 3.7e-25 COQ9
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 83
AccII CGCG 1 cut(s) 759
AciI CCGC 1 cut(s) 14
AcsI RAATTY 1 cut(s) 519
AcvI CACGTG 1 cut(s) 307
AcyI GRCGYC 1 cut(s) 197
AfaI GTAC 3 cut(s) 5, 214, 691
AfiI CCNNNNNNNGG 2 cut(s) 13, 317
AflII CTTAAG 1 cut(s) 806
AflIII ACRYGT 1 cut(s) 546
AgsI TTSAA 3 cut(s) 351, 440, 875
AjnI CCWGG 1 cut(s) 392
AluBI AGCT 6 cut(s) 76, 257, 404, 511, 566, 854
AluI AGCT 6 cut(s) 76, 257, 404, 511, 566, 854
Alw26I GTCTC 4 cut(s) 62, 119, 300, 372
AoxI GGCC 2 cut(s) 557, 825
ApeKI GCWGC 1 cut(s) 404
ApoI RAATTY 1 cut(s) 519
ArsI GACNNNNNNTTYG 2 cut(s) 65, 97
Asp700I GAANNNNTTC 1 cut(s) 435
AspLEI GCGC 1 cut(s) 583
AspS9I GGNCC 2 cut(s) 188, 558
AsuHPI GGTGA 2 cut(s) 141, 727
AvaII GGWCC 1 cut(s) 188
BauI CACGAG 1 cut(s) 279
BbrPI CACGTG 1 cut(s) 307
BbsI GAAGAC 3 cut(s) 17, 195, 849
BbvI GCAGC 1 cut(s) 391
BccI CCATC 2 cut(s) 334, 650
BceAI ACGGC 2 cut(s) 27, 210
BciT130I CCWGG 1 cut(s) 394
BcoDI GTCTC 4 cut(s) 62, 119, 300, 372
BfaI CTAG 1 cut(s) 527
BfrI CTTAAG 1 cut(s) 806
BisI GCNGC 2 cut(s) 15, 405
BlsI GCNGC 2 cut(s) 16, 406
Bme1390I CCNGG 1 cut(s) 394
Bme18I GGWCC 1 cut(s) 188
BmgT120I GGNCC 2 cut(s) 188, 558
BmiI GGNNCC 3 cut(s) 189, 560, 661
BmrFI CCNGG 1 cut(s) 394
BmsI GCATC 2 cut(s) 592, 784
BpiI GAAGAC 3 cut(s) 17, 195, 849
BpmI CTGGAG 2 cut(s) 376, 876
Bpu10I CCTNAGC 1 cut(s) 77
BsaAI YACGTR 1 cut(s) 307
BsaHI GRCGYC 1 cut(s) 197
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 2 cut(s) 311, 663
BsaWI WCCGGW 1 cut(s) 110
BsaXI ACNNNNNCTCC 2 cut(s) 843, 873
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 317
Bse118I RCCGGY 1 cut(s) 32
Bse3DI GCAATG 1 cut(s) 627
BseBI CCWGG 1 cut(s) 394
BseDI CCNNGG 2 cut(s) 311, 663
BseGI GGATG 5 cut(s) 90, 361, 433, 583, 784
BseLI CCNNNNNNNGG 2 cut(s) 13, 317
BseMI GCAATG 1 cut(s) 627
BseMII CTCAG 2 cut(s) 91, 249
BseRI GAGGAG 1 cut(s) 50
BseXI GCAGC 1 cut(s) 391
BsgI GTGCAG 1 cut(s) 103
Bsh1236I CGCG 1 cut(s) 759
BshFI GGCC 2 cut(s) 559, 827
BsiSI CCGG 2 cut(s) 33, 111
BslFI GGGAC 2 cut(s) 524, 581
BslI CCNNNNNNNGG 2 cut(s) 13, 317
BsmAI GTCTC 4 cut(s) 62, 119, 300, 372
BsmBI CGTCTC 2 cut(s) 62, 300
BsmFI GGGAC 2 cut(s) 524, 581
BsmI GAATGC 3 cut(s) 437, 573, 770
BsnI GGCC 2 cut(s) 559, 827
Bso31I GGTCTC 1 cut(s) 119
Bsp143I GATC 1 cut(s) 802
Bsp68I TCGCGA 1 cut(s) 759
BspACI CCGC 1 cut(s) 14
BspANI GGCC 2 cut(s) 559, 827
BspCNI CTCAG 2 cut(s) 90, 250
BspFNI CGCG 1 cut(s) 759
BspLI GGNNCC 3 cut(s) 189, 560, 661
BspQI GCTCTTC 2 cut(s) 264, 806
BspTI CTTAAG 1 cut(s) 806
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 1 cut(s) 627
BsrFI RCCGGY 1 cut(s) 32
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 2 cut(s) 311, 663
BssMI GATC 1 cut(s) 802
BssNI GRCGYC 1 cut(s) 197
BssSI CACGAG 1 cut(s) 279
Bst2BI CACGAG 1 cut(s) 279
Bst2UI CCWGG 1 cut(s) 394
Bst6I CTCTTC 2 cut(s) 264, 806
BstACI GRCGYC 1 cut(s) 197
BstAFI CTTAAG 1 cut(s) 806
BstBAI YACGTR 1 cut(s) 307
BstC8I GCNNGC 2 cut(s) 276, 645
BstDEI CTNAG 4 cut(s) 77, 258, 569, 748
BstF5I GGATG 5 cut(s) 90, 361, 433, 583, 784
BstFNI CGCG 1 cut(s) 759
BstHHI GCGC 1 cut(s) 583
BstKTI GATC 1 cut(s) 805
BstMAI GTCTC 4 cut(s) 62, 119, 300, 372
BstMBI GATC 1 cut(s) 802
BstMWI GCNNNNNNNGC 1 cut(s) 341
BstNI CCWGG 1 cut(s) 394
BstNSI RCATGY 3 cut(s) 550, 647, 733
BstSCI CCNGG 1 cut(s) 392
BstUI CGCG 1 cut(s) 759
BstV1I GCAGC 1 cut(s) 391
BstV2I GAAGAC 3 cut(s) 17, 195, 849
BsuRI GGCC 2 cut(s) 559, 827
BtgZI GCGATG 2 cut(s) 350, 740
BtsCI GGATG 5 cut(s) 90, 361, 433, 583, 784
BtuMI TCGCGA 1 cut(s) 759
Cac8I GCNNGC 2 cut(s) 276, 645
CfoI GCGC 1 cut(s) 583
Cfr10I RCCGGY 1 cut(s) 32
Cfr13I GGNCC 2 cut(s) 188, 558
CseI GACGC 3 cut(s) 11, 186, 282
Csp6I GTAC 3 cut(s) 4, 213, 690
CviAII CATG 6 cut(s) 236, 424, 547, 644, 730, 765
CviQI GTAC 3 cut(s) 4, 213, 690
DdeI CTNAG 4 cut(s) 77, 258, 569, 748
DpnI GATC 1 cut(s) 804
DpnII GATC 1 cut(s) 802
Eam1104I CTCTTC 2 cut(s) 264, 806
EarI CTCTTC 2 cut(s) 264, 806
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 1 cut(s) 188
Eco72I CACGTG 1 cut(s) 307
EcoRI GAATTC 1 cut(s) 519
EcoRII CCWGG 1 cut(s) 392
Esp3I CGTCTC 2 cut(s) 62, 300
FaeI CATG 6 cut(s) 239, 427, 550, 647, 733, 768
FalI AAGNNNNNCTT 2 cut(s) 393, 425
FaqI GGGAC 2 cut(s) 524, 581
FatI CATG 6 cut(s) 235, 423, 546, 643, 729, 764
FblI GTMKAC 1 cut(s) 83
Fnu4HI GCNGC 2 cut(s) 15, 405
FokI GGATG 5 cut(s) 77, 368, 440, 570, 791
Fsp4HI GCNGC 2 cut(s) 15, 405
FspBI CTAG 1 cut(s) 527
GlaI GCGC 1 cut(s) 582
GluI GCNGC 2 cut(s) 15, 405
GsuI CTGGAG 2 cut(s) 376, 876
HaeIII GGCC 2 cut(s) 559, 827
HapII CCGG 2 cut(s) 33, 111
HgaI GACGC 3 cut(s) 11, 186, 282
HhaI GCGC 1 cut(s) 583
Hin1I GRCGYC 1 cut(s) 197
Hin1II CATG 6 cut(s) 239, 427, 550, 647, 733, 768
Hin6I GCGC 1 cut(s) 581
HinP1I GCGC 1 cut(s) 581
HinfI GANTC 6 cut(s) 42, 146, 461, 487, 743, 786
HpaII CCGG 2 cut(s) 33, 111
HphI GGTGA 2 cut(s) 141, 727
Hpy166II GTNNAC 4 cut(s) 84, 172, 497, 709
Hpy188I TCNGA 4 cut(s) 65, 486, 591, 667
Hpy188III TCNNGA 4 cut(s) 465, 527, 758, 909
Hpy8I GTNNAC 4 cut(s) 84, 172, 497, 709
Hpy99I CGWCG 2 cut(s) 130, 202
HpyAV CCTTC 4 cut(s) 105, 215, 381, 446
HpyCH4IV ACGT 2 cut(s) 306, 499
HpyCH4V TGCA 5 cut(s) 120, 478, 535, 839, 898
HpyF10VI GCNNNNNNNGC 1 cut(s) 341
HpyF3I CTNAG 4 cut(s) 77, 258, 569, 748
HpySE526I ACGT 2 cut(s) 306, 499
Hsp92I GRCGYC 1 cut(s) 197
Hsp92II CATG 6 cut(s) 239, 427, 550, 647, 733, 768
HspAI GCGC 1 cut(s) 581
Kzo9I GATC 1 cut(s) 802
LguI GCTCTTC 2 cut(s) 264, 806
LmnI GCTCC 2 cut(s) 659, 851
Lsp1109I GCAGC 1 cut(s) 391
LweI GCATC 2 cut(s) 592, 784
MaeI CTAG 1 cut(s) 527
MaeII ACGT 2 cut(s) 306, 499
MaeIII GTNAC 1 cut(s) 302
MalI GATC 1 cut(s) 804
MboI GATC 1 cut(s) 802
MboII GAAGA 8 cut(s) 17, 195, 281, 341, 412, 823, 854, 924
MfeI CAATTG 1 cut(s) 440
MluCI AATT 2 cut(s) 440, 519
MlyI GAGTC 3 cut(s) 455, 737, 795
MmeI TCCRAC 3 cut(s) 215, 302, 631
MnlI CCTC 7 cut(s) 71, 109, 306, 597, 673, 695, 817
MroXI GAANNNNTTC 1 cut(s) 435
MseI TTAA 2 cut(s) 609, 807
MspCI CTTAAG 1 cut(s) 806
MspI CCGG 2 cut(s) 33, 111
MspR9I CCNGG 1 cut(s) 394
MunI CAATTG 1 cut(s) 440
Mva1269I GAATGC 3 cut(s) 437, 573, 770
MvaI CCWGG 1 cut(s) 394
MvnI CGCG 1 cut(s) 759
MwoI GCNNNNNNNGC 1 cut(s) 341
NdeII GATC 1 cut(s) 802
NlaIII CATG 6 cut(s) 239, 427, 550, 647, 733, 768
NlaIV GGNNCC 3 cut(s) 189, 560, 661
NmeAIII GCCGAG 2 cut(s) 276, 336
NmuCI GTSAC 1 cut(s) 302
NruI TCGCGA 1 cut(s) 759
NspI RCATGY 3 cut(s) 550, 647, 733
PaeI GCATGC 1 cut(s) 647
PciI ACATGT 1 cut(s) 546
PciSI GCTCTTC 2 cut(s) 264, 806
PcsI WCGNNNNNNNCGW 1 cut(s) 332
PctI GAATGC 3 cut(s) 437, 573, 770
PdmI GAANNNNTTC 1 cut(s) 435
PfeI GAWTC 3 cut(s) 42, 146, 487
PflFI GACNNNGTC 2 cut(s) 785, 904
PfoI TCCNGGA 1 cut(s) 392
PkrI GCNGC 2 cut(s) 16, 406
PleI GAGTC 3 cut(s) 455, 737, 794
PmaCI CACGTG 1 cut(s) 307
PmlI CACGTG 1 cut(s) 307
PpsI GAGTC 3 cut(s) 455, 737, 794
Ppu21I YACGTR 1 cut(s) 307
PscI ACATGT 1 cut(s) 546
Psp6I CCWGG 1 cut(s) 392
PspCI CACGTG 1 cut(s) 307
PspGI CCWGG 1 cut(s) 392
PspN4I GGNNCC 3 cut(s) 189, 560, 661
PspPI GGNCC 2 cut(s) 188, 558
PsyI GACNNNGTC 2 cut(s) 785, 904
RruI TCGCGA 1 cut(s) 759
RsaI GTAC 3 cut(s) 5, 214, 691
RsaNI GTAC 3 cut(s) 4, 213, 690
SapI GCTCTTC 2 cut(s) 264, 806
SaqAI TTAA 2 cut(s) 609, 807
SatI GCNGC 2 cut(s) 15, 405
Sau3AI GATC 1 cut(s) 802
Sau96I GGNCC 2 cut(s) 188, 558
SchI GAGTC 3 cut(s) 455, 737, 795
ScrFI CCNGG 1 cut(s) 394
SfaNI GCATC 2 cut(s) 592, 784
SgrAI CRCCGGYG 1 cut(s) 32
SinI GGWCC 1 cut(s) 188
SmlI CTYRAG 1 cut(s) 806
SmoI CTYRAG 1 cut(s) 806
SphI GCATGC 1 cut(s) 647
Sse9I AATT 2 cut(s) 440, 519
SsiI CCGC 1 cut(s) 14
SspMI CTAG 1 cut(s) 527
StyD4I CCNGG 1 cut(s) 392
TaiI ACGT 2 cut(s) 309, 502
TaqI TCGA 2 cut(s) 128, 374
TasI AATT 2 cut(s) 440, 519
TauI GCSGC 1 cut(s) 17
TfiI GAWTC 3 cut(s) 42, 146, 487
Tru1I TTAA 2 cut(s) 609, 807
Tru9I TTAA 2 cut(s) 609, 807
TseFI GTSAC 1 cut(s) 302
TseI GCWGC 1 cut(s) 404
Tsp45I GTSAC 1 cut(s) 302
TspDTI ATGAA 3 cut(s) 412, 444, 899
TspGWI ACGGA 2 cut(s) 290, 341
Tth111I GACNNNGTC 2 cut(s) 785, 904
Vha464I CTTAAG 1 cut(s) 806
VpaK11BI GGWCC 1 cut(s) 188
XapI RAATTY 1 cut(s) 519
XbaI TCTAGA 1 cut(s) 526
XceI RCATGY 3 cut(s) 550, 647, 733
XmiI GTMKAC 1 cut(s) 83
XmnI GAANNNNTTC 1 cut(s) 435
XspI CTAG 1 cut(s) 527
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.