Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008380

Physical Location & Seq

Genomic Coordinates Reverse (-)

6627683 .. 6633133

Gene Structure 5451 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G19220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3261 bp

ATGAAAGCTCCATCAAATGGATTTCTTCCAAGTTCCAACGAAGGAGAGAAGAAGCCAATCAATTCTCAACTATGGCACGCTTGTGCAGGGCCTTTAGTTTCATTACCTCCTGTGGGAAGTCTTGTGGTTTACTTCCCTCAAGGACACAGCGAGCAAGTTGCAGCATCGATGCAGAAGCAAACAGATTTTATACCAAATTACCCAAATCTTCCTTCTAAGCTGATTTGCTTGCTTCACAGTGTTACATTACATGCTGATACCGAAACAGATGAAGTCTATGCACAAATGACTCTTCAACCTGTGAATAAGTATGATAGAGAAGCATTGCTAGCTTCTGATATGGGCTTGAAGCTAAACAGACAACCTACTGAGTTTTTTTGCAAGACTCTTACTGCAAGTGACACAAGCACTCATGGTGGATTCTCTGTACCGCGTCGTGCAGCTGAGAAAATATTCCCTCCTCTTGATTTCTCGATGCAACCGCCTGCGCAAGAGATTGTAGCTAAAGATTTACATGATACTACATGGACTTTCAGACATATCTATCGAGGCCAACCAAAAAGACACTTGCTTACCACAGGTTGGAGCGTTTTTGTTAGCACAAAGAGACTATTTGCGGGTGATTCAGTTTTGTTTGTAAGAGATGAGAAATCACAGCTGATGTTGGGTATAAGACGTGCAAATAGACAAACTCCGACTCTTTCCTCATCGGTCATATCCAGCGACAGTATGCACATTGGGATACTTGCAGCTGCAGCTCATGCTAATGCCAATAGTAGCCCTTTTACCATCTTCTTCAATCCAAGGGCAAGTCCTTCAGAGTTTGTAGTTCCTTTAGCCAAATACAACAAAGCCTTATACGCTCAAGTATCTCTAGGAATGAGATTCCGGATGATGTTTGAGACTGAGGATTGTGGGGTTCGTAGATATATGGGTACAGTCACAGGTATTAGTGATCTTGACCCTGTAAGATGGAAAGGCTCACAATGGCGTAATCTTCAGGTAGGATGGGATGAATCAACAGCTGGAGATAGGCCAAGCCGAGTATCCATATGGGAAATCGAACCCGTCATAACTCCTTTTTACATATGTCCTCCTCCATTTTTCAGACCTAAGTACCCGAGGCAACCCGGGATGCCAGATGATGAGTTAGACATGGAAAATGCTTTCAAAAGAGCAATGCCTTGGATGGGAGAAGACTTTGGGATGAAGGACGCACAGAGTTCGATGTTCCCTGGTTTAAGTCTAGTTCAATGGATGAGTATGCAGCAAAACAATCCATTGTCAGGTTCTGCTACTCCTCAGCTCCCGTCCGCGCTCTCATCTTTTAACCTACCAAACAATTTTGCTTCCAACGACCCTTCCAAGCTGTTGAACTTCCAATCCCCAAACCTCTCTTCCGCAAATTCCCAATTCAACAAACCGAACACGGTTAACCATATCAGCCAACAGATGCAAGCACAACCAGCCATGGTGAAATCTCAACAACAACAACAACAACAACAACAACAACACCAACACCAACAACAACAACTGCAACAACAACAACAACTACAGATGTCACAGCAACAGGTGCAGCAACAAGGGATTTATAACAATGGTACGATTGCTGTTGCTAACCAAGTCTCTTGTCAAAGTCCAAACCAACCTACTGGATTCTCTCAGTCTCAGCTTCAGCAGCAGTCAATGCTCCCTACTGGTGCTAAAATGACACACCAGAACATAAATTCTATGGGGAATAAAGGCTTGTCTCAAATGACATCGTTTGCGCAAGAAATGCAGTTTCAGCAGCAACTGGAAATGCATAACAGTAGCCAGTTATTAAGAAACCAGCAAGAACAGTCCTCTCTCCATTCATTACAACAAAATCTGTCCCAAAATCCTCAGCAACTCCAAATGCAACAACAATCATCAAAACCAAGTCCTTCACAACAGCTTCAGTTGCAGCTACTGCAGAAGCTACAGCAGCAGCAACAGCAGCAGTCGATTCCTCCAGTAAGCTCATCCTTACAGCCACAATTATCAGCGTTGCAGCAGACACAAAGCCATCAATTGCAACAACTTCTGTCGTCTCAAAATCAACAGCCCTTGGCACATGGTAATAACAGCTTCCCAGCTTCAACTTTCATGCAGCCTCCACAGATTCAGGTGAGTCCTCAGCAGCAAGGACAGATGAGTAACAAAAATCTTGTAGCCGCTGGAAGATCACATTCTGGCCACACAGATGGAGAAGCTCCTTCTTGTTCAACCTCACCTTCCGCCAATAACACGGGACATGATAATGTTTCACCGACAAATTTCCTGAGCAGAAATCAACAGCAAGGACAAGCTGCATCTGTATCTGCATCTGATTCAGTCTTTGAGCGCGCAAGCAATCCGGTCCAAGAGCTTTATACAAAAACTGAGAGCCGGATCAGTCAAGGCATGATGAATATGAAGAGTGCTGGTGAACATTTCAGATTTAAAAGCGCGGTAACAGATCAAATCGATGTATCCACAGCGGGAACGACGTACTGTCCTGATGTTGTTGGCCCTGTACAGCAGCAACAAACTTTCCCACTACCATCATTTGGTTTTGATGGAGACTGCCAATCTCATCATCCAAGAAACAACTTAGCTTTCCCTGGTAATCTCGAAGCCGTAACTTCTGATCCACTCTATTCTCAAAAGGACTTTCAAAACTTGGTTCCCAACTATGGCAACACACCAAGAGACATTGAGACGGAGCTGTCCAGTGCTGCAATCAGTTCTCAGTCATTTGGTATTCCCAGCATTCCCTTTAAGCCCGGATGTTCAAATGAGGTTGGCGGCATCAATGATTCAGGAATCATGAATGGTGGAGGACTGTGGCCCAATCAGACTCAACGAATGCGAACATATACAAAGGTTCAAAAACGAGGGTCAGTAGGTAGATCAATAGATGTTACCCGTTATAGCGGCTATGATGAACTTAGGCATGACTTAGCGAGAATGTTTGGCATCGAAGGACAGCTCGAAGATCCGCTAACCTCTGATTGGAAACTCGTCTACACCGATCACGAAAACGATATTTTACTAGTTGGTGATGATCCTTGGGAAGAGTTTGTGAACTGCGTGCAGAACATAAAGATACTATCATCAGTAGAAGTTCAGCAAATGAGCTTAGACGGAGATCTTGCAGCTATCCCAACCACAAACCAAGCCTGCAGCGAAACAGACAGCGGAAATGCTTGGAAAGTACACTATGAAGACACTTCTGCTGCAGCTTCTTTCAACAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046983 GO:0048364 GO:0048366 GO:0048367 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

1086

Amino Acids

120.57

Weight (kDa)

6.2

Isoelectric Point (pI)

64.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	126 - 228	9.2e-22	B3 DNA binding domain
ARF_AD	PF06507	275 - 357	1.3e-35	Auxin response factor ancillary domain
AUX_IAA	PF02309	955 - 1044	4.6e-09	AUX/IAA family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19220 AT5G20730 AT5G20730 AT5G20730
fragaria_vesca	FvH4_1g09150 FvH4_1g09150 FvH4_1g09150
malus_domestica	MD02G1096700.v1.1 MD15G1221400.v1.1
prunus_persica	Prupe.7G194200_v2.0.a1 Prupe.7G194200_v2.0.a1
pyrus_communis	pycom02g07670
rosa_chinensis	RchiOBHm_Chr2g0095551
rosa_laevigata	RLG00000016578
rosa_multiflora	Rmu_sc0005382.1_g000007 Rmu_sc0038699.1_g000002
rosa_roxburghii	Rroxscaffold_2G00146200
rosa_rugosa	Rorug02G0052300
rosa_samantha	Rh2AG100100 Rh2BG101600 Rh2CG103700 Rh2DG101000
rosa_wichuraiana	Rw2G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1593
AasI	GACNNNNNNGTC	1 cut(s)	2728
Acc16I	TGCGCA	2 cut(s)	489, 1770
AccB7I	CCANNNNNTGG	3 cut(s)	17, 582, 2570
AccI	GTMKAC	1 cut(s)	3027
AccII	CGCG	4 cut(s)	433, 1316, 2367, 2471
AccIII	TCCGGA	1 cut(s)	888
AclWI	GGATC	4 cut(s)	2420, 2645, 2993, 3062
AcoI	YGGCCR	1 cut(s)	2215
AcsI	RAATTY	3 cut(s)	1405, 1726, 2296
AcuI	CTGAAG	4 cut(s)	801, 983, 1658, 1922
AfaI	GTAC	7 cut(s)	429, 937, 1118, 1603, 2513, 2538, 3219
AfiI	CCNNNNNNNGG	8 cut(s)	17, 113, 582, 1190, 1286, 2570, 2696, 3015
AhdI	GACNNNNNGTC	1 cut(s)	2514
AhlI	ACTAGT	1 cut(s)	3055
AjiI	CACGTC	1 cut(s)	677
AjnI	CCWGG	2 cut(s)	1234, 2623
AjuI	GAANNNNNNNTTGG	4 cut(s)	196, 228, 1381, 1413
AleI	CACNNNNGTG	1 cut(s)	81
AloI	GAACNNNNNNTCC	2 cut(s)	1367, 1399
Alw26I	GTCTC	9 cut(s)	601, 896, 1630, 1671, 1755, 2076, 2577, 2706, 2714
AlwI	GGATC	4 cut(s)	2420, 2645, 2993, 3062
AlwNI	CAGNNNCTG	3 cut(s)	1292, 1795, 1951
Ama87I	CYCGRG	2 cut(s)	1120, 1130
Aor13HI	TCCGGA	1 cut(s)	888
AoxI	GGCC	6 cut(s)	89, 550, 1034, 2215, 2530, 2849
ApoI	RAATTY	3 cut(s)	1405, 1726, 2296
Asp700I	GAANNNNTTC	1 cut(s)	452
AspLEI	GCGC	6 cut(s)	490, 1318, 1771, 2367, 2369, 2471
AspS9I	GGNCC	4 cut(s)	89, 2380, 2531, 2850
AsuC2I	CCSGG	3 cut(s)	1131, 1132, 2787
AsuHPI	GGTGA	7 cut(s)	632, 1486, 2161, 2244, 2280, 2459, 3074
AsuNHI	GCTAGC	1 cut(s)	328
AvaI	CYCGRG	2 cut(s)	1120, 1130
AvaII	GGWCC	1 cut(s)	2380
BaeI	ACNNNNGTAYC	2 cut(s)	1100, 1133
BalI	TGGCCA	1 cut(s)	2217
BbsI	GAAGAC	2 cut(s)	1203, 3234
BbvCI	CCTCAGC	3 cut(s)	1302, 1884, 2157
BccI	CCATC	9 cut(s)	19, 797, 966, 1002, 1183, 2055, 2219, 2572, 2573
BceAI	ACGGC	1 cut(s)	2624
BcgI	CGANNNNNNTGC	4 cut(s)	140, 174, 1206, 1240
BciT130I	CCWGG	2 cut(s)	1236, 2625
BciVI	GTATCC	3 cut(s)	735, 1057, 2503
BcnI	CCSGG	3 cut(s)	1131, 1132, 2787
BcoDI	GTCTC	9 cut(s)	601, 896, 1630, 1671, 1755, 2076, 2577, 2706, 2714
BcuI	ACTAGT	1 cut(s)	3055
BfaI	CTAG	4 cut(s)	329, 875, 1247, 3056
BfmI	CTRYAG	6 cut(s)	753, 1553, 1952, 1961, 3184, 3240
BfuI	GTATCC	3 cut(s)	735, 1057, 2503
BglII	AGATCT	1 cut(s)	3151
Bme1390I	CCNGG	5 cut(s)	1131, 1132, 1236, 2625, 2787
Bme18I	GGWCC	1 cut(s)	2380
BmeRI	GACNNNNNGTC	1 cut(s)	2514
BmeT110I	CYCGRG	2 cut(s)	1120, 1130
BmgBI	CACGTC	1 cut(s)	677
BmgT120I	GGNCC	4 cut(s)	89, 2380, 2531, 2850
BmiI	GGNNCC	1 cut(s)	2688
BmrFI	CCNGG	5 cut(s)	1131, 1132, 1236, 2625, 2787
BmsI	GCATC	9 cut(s)	159, 173, 465, 1125, 1443, 2342, 2354, 2820, 2988
BmtI	GCTAGC	1 cut(s)	332
BpiI	GAAGAC	2 cut(s)	1203, 3234
BpmI	CTGGAG	2 cut(s)	1047, 1977
Bpu10I	CCTNAGC	4 cut(s)	1302, 1884, 2157, 2303
BpuEI	CTTGAG	2 cut(s)	123, 849
BpuMI	CCSGG	3 cut(s)	1131, 1132, 2787
Bsa29I	ATCGAT	2 cut(s)	167, 2487
BsaJI	CCNNGG	9 cut(s)	803, 1121, 1130, 1184, 1234, 1470, 2088, 2623, 3071
BsaWI	WCCGGW	2 cut(s)	888, 2377
Bsc4I	CCNNNNNNNGG	8 cut(s)	17, 113, 582, 1190, 1286, 2570, 2696, 3015
Bse1I	ACTGG	6 cut(s)	1657, 1702, 1800, 1816, 1994, 2733
Bse3DI	GCAATG	2 cut(s)	323, 1185
BseAI	TCCGGA	1 cut(s)	888
BseBI	CCWGG	2 cut(s)	1236, 2625
BseCI	ATCGAT	2 cut(s)	167, 2487
BseDI	CCNNGG	9 cut(s)	803, 1121, 1130, 1184, 1234, 1470, 2088, 2623, 3071
BseLI	CCNNNNNNNGG	8 cut(s)	17, 113, 582, 1190, 1286, 2570, 2696, 3015
BseMI	GCAATG	2 cut(s)	323, 1185
BseNI	ACTGG	6 cut(s)	1657, 1702, 1800, 1816, 1994, 2733
BsePI	GCGCGC	1 cut(s)	2365
BseRI	GAGGAG	3 cut(s)	450, 1086, 1290
BseYI	CCCAGC	2 cut(s)	2113, 2768
BsgI	GTGCAG	4 cut(s)	105, 459, 1595, 3116
Bsh1236I	CGCG	4 cut(s)	433, 1316, 2367, 2471
BshFI	GGCC	6 cut(s)	91, 552, 1036, 2217, 2532, 2851
BshVI	ATCGAT	2 cut(s)	167, 2487
BsiHKCI	CYCGRG	2 cut(s)	1120, 1130
BsiSI	CCGG	5 cut(s)	889, 1131, 2378, 2410, 2787
BslFI	GGGAC	2 cut(s)	1858, 2286
BslI	CCNNNNNNNGG	8 cut(s)	17, 113, 582, 1190, 1286, 2570, 2696, 3015
BsmAI	GTCTC	9 cut(s)	601, 896, 1630, 1671, 1755, 2076, 2577, 2706, 2714
BsmBI	CGTCTC	2 cut(s)	2076, 2714
BsmFI	GGGAC	2 cut(s)	1858, 2286
BsmI	GAATGC	2 cut(s)	2772, 2874
BsnI	GGCC	6 cut(s)	91, 552, 1036, 2217, 2532, 2851
BsoBI	CYCGRG	2 cut(s)	1120, 1130
Bsp13I	TCCGGA	1 cut(s)	888
Bsp1407I	TGTACA	1 cut(s)	2536
Bsp19I	CCATGG	1 cut(s)	1470
BspANI	GGCC	6 cut(s)	91, 552, 1036, 2217, 2532, 2851
BspDI	ATCGAT	2 cut(s)	167, 2487
BspEI	TCCGGA	1 cut(s)	888
BspFNI	CGCG	4 cut(s)	433, 1316, 2367, 2471
BspHI	TCATGA	1 cut(s)	2829
BspLI	GGNNCC	1 cut(s)	2688
BspMAI	CTGCAG	4 cut(s)	757, 1956, 3188, 3244
BspOI	GCTAGC	1 cut(s)	332
BspPI	GGATC	4 cut(s)	2420, 2645, 2993, 3062
BsrDI	GCAATG	2 cut(s)	323, 1185
BsrGI	TGTACA	1 cut(s)	2536
BsrI	ACTGG	6 cut(s)	1657, 1702, 1800, 1816, 1994, 2733
BssECI	CCNNGG	9 cut(s)	803, 1121, 1130, 1184, 1234, 1470, 2088, 2623, 3071
BssHII	GCGCGC	1 cut(s)	2365
BssT1I	CCWWGG	5 cut(s)	803, 1184, 1470, 2088, 3071
Bst2UI	CCWGG	2 cut(s)	1236, 2625
Bst4CI	ACNGT	8 cut(s)	239, 728, 940, 1432, 1811, 1842, 2516, 2847
Bst6I	CTCTTC	4 cut(s)	297, 1402, 2432, 3072
BstAPI	GCANNNNNTGC	5 cut(s)	761, 1573, 1687, 1777, 1951
BstAUI	TGTACA	1 cut(s)	2536
BstDSI	CCRYGG	1 cut(s)	1470
BstFNI	CGCG	4 cut(s)	433, 1316, 2367, 2471
BstHHI	GCGC	6 cut(s)	490, 1318, 1771, 2367, 2369, 2471
BstMAI	GTCTC	9 cut(s)	601, 896, 1630, 1671, 1755, 2076, 2577, 2706, 2714
BstNI	CCWGG	2 cut(s)	1236, 2625
BstNSI	RCATGY	1 cut(s)	254
BstSCI	CCNGG	5 cut(s)	1129, 1130, 1234, 2623, 2785
BstSFI	CTRYAG	6 cut(s)	753, 1553, 1952, 1961, 3184, 3240
BstUI	CGCG	4 cut(s)	433, 1316, 2367, 2471
BstV2I	GAAGAC	2 cut(s)	1203, 3234
BstX2I	RGATCY	2 cut(s)	2998, 3151
BstXI	CCANNNNNNTGG	2 cut(s)	1652, 2225
BstYI	RGATCY	2 cut(s)	2998, 3151
Bsu15I	ATCGAT	2 cut(s)	167, 2487
BsuI	GTATCC	3 cut(s)	735, 1057, 2503
BsuRI	GGCC	6 cut(s)	91, 552, 1036, 2217, 2532, 2851
BsuTUI	ATCGAT	2 cut(s)	167, 2487
BtgI	CCRYGG	1 cut(s)	1470
BtrI	CACGTC	1 cut(s)	677
BtsIMutI	CAGTG	2 cut(s)	244, 2740
CaiI	CAGNNNCTG	3 cut(s)	1292, 1795, 1951
CciI	TCATGA	1 cut(s)	2829
CfoI	GCGC	6 cut(s)	490, 1318, 1771, 2367, 2369, 2471
Cfr13I	GGNCC	4 cut(s)	89, 2380, 2531, 2850
Cfr9I	CCCGGG	1 cut(s)	1130
ClaI	ATCGAT	2 cut(s)	167, 2487
CseI	GACGC	2 cut(s)	422, 1223
Csp6I	GTAC	7 cut(s)	428, 936, 1117, 1602, 2512, 2537, 3218
CviQI	GTAC	7 cut(s)	428, 936, 1117, 1602, 2512, 2537, 3218
DraI	TTTAAA	1 cut(s)	2464
DrdI	GACNNNNNNGTC	1 cut(s)	2728
DriI	GACNNNNNGTC	1 cut(s)	2514
DseDI	GACNNNNNNGTC	1 cut(s)	2728
EaeI	YGGCCR	1 cut(s)	2215
Eam1104I	CTCTTC	4 cut(s)	297, 1402, 2432, 3072
Eam1105I	GACNNNNNGTC	1 cut(s)	2514
EarI	CTCTTC	4 cut(s)	297, 1402, 2432, 3072
EciI	GGCGGA	1 cut(s)	2248
Eco130I	CCWWGG	5 cut(s)	803, 1184, 1470, 2088, 3071
Eco47I	GGWCC	1 cut(s)	2380
Eco57I	CTGAAG	4 cut(s)	801, 983, 1658, 1922
Eco88I	CYCGRG	2 cut(s)	1120, 1130
EcoO109I	RGGNCCY	1 cut(s)	89
EcoRII	CCWGG	2 cut(s)	1234, 2623
EcoT14I	CCWWGG	5 cut(s)	803, 1184, 1470, 2088, 3071
EcoT22I	ATGCAT	1 cut(s)	1806
ErhI	CCWWGG	5 cut(s)	803, 1184, 1470, 2088, 3071
Esp3I	CGTCTC	2 cut(s)	2076, 2714
FaqI	GGGAC	2 cut(s)	1858, 2286
FauI	CCCGC	2 cut(s)	610, 2494
FauNDI	CATATG	2 cut(s)	1052, 1088
FblI	GTMKAC	1 cut(s)	3027
FspBI	CTAG	4 cut(s)	329, 875, 1247, 3056
FspI	TGCGCA	2 cut(s)	489, 1770
GlaI	GCGC	6 cut(s)	489, 1317, 1770, 2366, 2368, 2470
GsaI	CCCAGC	2 cut(s)	2117, 2772
GsuI	CTGGAG	2 cut(s)	1047, 1977
HaeIII	GGCC	6 cut(s)	91, 552, 1036, 2217, 2532, 2851
HapII	CCGG	5 cut(s)	889, 1131, 2378, 2410, 2787
HgaI	GACGC	2 cut(s)	422, 1223
HhaI	GCGC	6 cut(s)	490, 1318, 1771, 2367, 2369, 2471
Hin6I	GCGC	6 cut(s)	488, 1316, 1769, 2365, 2367, 2469
HinP1I	GCGC	6 cut(s)	488, 1316, 1769, 2365, 2367, 2469
HincII	GTYRAC	1 cut(s)	1435
HindII	GTYRAC	1 cut(s)	1435
HpaI	GTTAAC	1 cut(s)	1435
HpaII	CCGG	5 cut(s)	889, 1131, 2378, 2410, 2787
HphI	GGTGA	7 cut(s)	632, 1486, 2161, 2244, 2280, 2459, 3074
Hpy166II	GTNNAC	6 cut(s)	130, 1435, 2450, 3028, 3088, 3220
Hpy8I	GTNNAC	6 cut(s)	130, 1435, 2450, 3028, 3088, 3220
Hpy99I	CGWCG	2 cut(s)	438, 2512
HpyAV	CCTTC	9 cut(s)	35, 222, 825, 1204, 1371, 1935, 2247, 2265, 2978
HpyCH4III	ACNGT	8 cut(s)	239, 728, 940, 1432, 1811, 1842, 2516, 2847
HpyCH4IV	ACGT	2 cut(s)	676, 2510
HpySE526I	ACGT	2 cut(s)	676, 2510
HspAI	GCGC	6 cut(s)	488, 1316, 1769, 2365, 2367, 2469
Kpn2I	TCCGGA	1 cut(s)	888
KspAI	GTTAAC	1 cut(s)	1435
LmnI	GCTCC	6 cut(s)	13, 585, 1311, 1695, 2239, 2725
LweI	GCATC	9 cut(s)	159, 173, 465, 1125, 1443, 2342, 2354, 2820, 2988
MaeI	CTAG	4 cut(s)	329, 875, 1247, 3056
MaeII	ACGT	2 cut(s)	676, 2510
MaeIII	GTNAC	8 cut(s)	241, 398, 940, 1560, 2177, 2473, 2641, 2923
MfeI	CAATTG	1 cut(s)	2051
MflI	RGATCY	2 cut(s)	2998, 3151
MlsI	TGGCCA	1 cut(s)	2217
MluCI	AATT	9 cut(s)	61, 196, 1342, 1405, 1412, 1726, 2018, 2051, 2296
MluNI	TGGCCA	1 cut(s)	2217
MlyI	GAGTC	5 cut(s)	283, 379, 691, 2161, 2854
MmeI	TCCRAC	4 cut(s)	60, 563, 719, 1377
Mox20I	TGGCCA	1 cut(s)	2217
Mph1103I	ATGCAT	1 cut(s)	1806
MroI	TCCGGA	1 cut(s)	888
MroXI	GAANNNNTTC	1 cut(s)	452
MscI	TGGCCA	1 cut(s)	2217
MseI	TTAA	6 cut(s)	1241, 1329, 1434, 1823, 2463, 2781
MslI	CAYNNNNRTG	4 cut(s)	81, 765, 2223, 2280
Msp20I	TGGCCA	1 cut(s)	2217
MspA1I	CMGCKG	7 cut(s)	443, 658, 752, 1025, 2198, 2501, 3201
MspI	CCGG	5 cut(s)	889, 1131, 2378, 2410, 2787
MspR9I	CCNGG	5 cut(s)	1131, 1132, 1236, 2625, 2787
MunI	CAATTG	1 cut(s)	2051
Mva1269I	GAATGC	2 cut(s)	2772, 2874
MvaI	CCWGG	2 cut(s)	1236, 2625
MvnI	CGCG	4 cut(s)	433, 1316, 2367, 2471
NciI	CCSGG	3 cut(s)	1131, 1132, 2787
NcoI	CCATGG	1 cut(s)	1470
NdeI	CATATG	2 cut(s)	1052, 1088
NheI	GCTAGC	1 cut(s)	328
NlaIV	GGNNCC	1 cut(s)	2688
NmeAIII	GCCGAG	1 cut(s)	1067
NmuCI	GTSAC	3 cut(s)	398, 940, 1560
NsbI	TGCGCA	2 cut(s)	489, 1770
NsiI	ATGCAT	1 cut(s)	1806
NspI	RCATGY	1 cut(s)	254
OliI	CACNNNNGTG	1 cut(s)	81
PagI	TCATGA	1 cut(s)	2829
PauI	GCGCGC	1 cut(s)	2365
PcsI	WCGNNNNNNNCGW	1 cut(s)	3030
PctI	GAATGC	2 cut(s)	2772, 2874
PdmI	GAANNNNTTC	1 cut(s)	452
PflMI	CCANNNNNTGG	3 cut(s)	17, 582, 2570
PleI	GAGTC	5 cut(s)	283, 379, 691, 2160, 2854
PpsI	GAGTC	5 cut(s)	283, 379, 691, 2160, 2854
PsiI	TTATAA	1 cut(s)	1593
Psp6I	CCWGG	2 cut(s)	1234, 2623
PspFI	CCCAGC	2 cut(s)	2113, 2768
PspGI	CCWGG	2 cut(s)	1234, 2623
PspN4I	GGNNCC	1 cut(s)	2688
PspPI	GGNCC	4 cut(s)	89, 2380, 2531, 2850
PstI	CTGCAG	4 cut(s)	757, 1956, 3188, 3244
PstNI	CAGNNNCTG	3 cut(s)	1292, 1795, 1951
PsuI	RGATCY	2 cut(s)	2998, 3151
PteI	GCGCGC	1 cut(s)	2365
PvuII	CAGCTG	4 cut(s)	443, 658, 752, 1025
RsaI	GTAC	7 cut(s)	429, 937, 1118, 1603, 2513, 2538, 3219
RsaNI	GTAC	7 cut(s)	428, 936, 1117, 1602, 2512, 2537, 3218
RseI	CAYNNNNRTG	4 cut(s)	81, 765, 2223, 2280
SaqAI	TTAA	6 cut(s)	1241, 1329, 1434, 1823, 2463, 2781
Sau96I	GGNCC	4 cut(s)	89, 2380, 2531, 2850
SchI	GAGTC	5 cut(s)	283, 379, 691, 2161, 2854
ScrFI	CCNGG	5 cut(s)	1131, 1132, 1236, 2625, 2787
SfaNI	GCATC	9 cut(s)	159, 173, 465, 1125, 1443, 2342, 2354, 2820, 2988
SfcI	CTRYAG	6 cut(s)	753, 1553, 1952, 1961, 3184, 3240
SinI	GGWCC	1 cut(s)	2380
SmaI	CCCGGG	1 cut(s)	1132
SmiMI	CAYNNNNRTG	4 cut(s)	81, 765, 2223, 2280
SmlI	CTYRAG	2 cut(s)	138, 864
SmoI	CTYRAG	2 cut(s)	138, 864
SpeI	ACTAGT	1 cut(s)	3055
Sse9I	AATT	9 cut(s)	61, 196, 1342, 1405, 1412, 1726, 2018, 2051, 2296
SspI	AATATT	1 cut(s)	453
SspMI	CTAG	4 cut(s)	329, 875, 1247, 3056
StyD4I	CCNGG	5 cut(s)	1129, 1130, 1234, 2623, 2785
StyI	CCWWGG	5 cut(s)	803, 1184, 1470, 2088, 3071
TaaI	ACNGT	8 cut(s)	239, 728, 940, 1432, 1811, 1842, 2516, 2847
TaiI	ACGT	2 cut(s)	679, 2513
TaqII	GACCGA	1 cut(s)	700
TasI	AATT	9 cut(s)	61, 196, 1342, 1405, 1412, 1726, 2018, 2051, 2296
TatI	WGTACW	2 cut(s)	2536, 3217
TauI	GCSGC	3 cut(s)	2198, 2811, 2940
Tru1I	TTAA	6 cut(s)	1241, 1329, 1434, 1823, 2463, 2781
Tru9I	TTAA	6 cut(s)	1241, 1329, 1434, 1823, 2463, 2781
TscAI	CASTG	2 cut(s)	244, 2740
TseFI	GTSAC	3 cut(s)	398, 940, 1560
Tsp45I	GTSAC	3 cut(s)	398, 940, 1560
TspGWI	ACGGA	2 cut(s)	2738, 3162
TspMI	CCCGGG	1 cut(s)	1130
TspRI	CASTG	2 cut(s)	244, 2740
Van91I	CCANNNNNTGG	3 cut(s)	17, 582, 2570
VpaK11BI	GGWCC	1 cut(s)	2380
XapI	RAATTY	3 cut(s)	1405, 1726, 2296
XceI	RCATGY	1 cut(s)	254
XmaI	CCCGGG	1 cut(s)	1130
XmiI	GTMKAC	1 cut(s)	3027
XmnI	GAANNNNTTC	1 cut(s)	452
XspI	CTAG	4 cut(s)	329, 875, 1247, 3056
Zsp2I	ATGCAT	1 cut(s)	1806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.