Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0008380

Physical Location & Seq

Genomic Coordinates Reverse (-)

5373306 .. 5376801

Gene Structure 3496 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g07670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGAAGGTTCCCACCAATGGGTTTTTAGCAAATTCTGGGGAAGCCGGAGAACAAAAGAGAATTAATTCAGAGTTATGGCATGCTTGTGCTGGGCCATTGGTTTCTTTGCCTCCGGTTGGAAGTCTTGTGGTGTACTTCCCACAAGGCCACAGCGAGCAAGTTGCAGCATCGATGCAAAAGGAGACTGATTTCATACCGAACTACACCAATCTTCCGTCTAAATTGATATGCATGCTTCACAATGTCACATTGCATGCTGATACCGAAACAGATGAGGTCTACGCACAAATGACTCTCCAACCAGTAAACAAATATGAGAAGGAAGCATTGCTGGCATCTGACATGGGCCTCAGACAAAGTAGGCAACCTACTGAGTTTTTCTGCAAAACTCTTACAGCTAGCGACACGAGCACTCATGGTGGATTTTCTGTACCTCGTAGAGCAGCTGAGAAGATCCTCCCACCTCTAGATTTTTCTATGCAACCACCTGCTCAGGAGCTTGTTGCAAAAGATTTGCATGATAGTGTGTGGACATTTAGACATATCTATCGAGGCCAACCAAAACGGCACCTGCTGACTACAGGTTGGAGTGTTTTTGTTAGCAACAAAAGACTCTTTGCTGGAGATTCTGTTCTTTTTATAAGGGATGAAAAATCTCAGCTTCTCTTGGGTATAAGGCGTGCTAATAGACAGCAGCCAGCTCTCTCGTCATCAGTCATTTCCAGTGATAGCATGCATATCGGCATTCTTGCGGCTGCAGCTCATGCTGCTGCAAATAACAGTCCCTTTACCATATTTTACAACCCAAGGGCAAGCCCTTCTGAATTTGTAGTACCTCTAGCCAAGTACAATAAAGCGATGTATACCCAGGTTTCACTTGGCATGCGATTCAGAATGATGTTTGAGACTGAAGAGTCAGGAGTACGCAGATACATGGGCACAGTCACTGGCATCAGCGATTTCGATCCTGTTCGATGGAAAGGTTCGCAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCAACAGCTGGTGACCGGCCTAGCCGAGTTTCAATTTGGGAAATTGAGCCTGTTATAACTCCTTTCTACATATGCCCTCCTCCATTTTTCAGACCCAAGTTTCCCAAGCAACCAGGGATGCCAGATGATGTATCCGACATCGATAATGCTTTCAGGAGAGCCATGCCTTGGCTTGGAGATGAATTTGGCATGAAGAACTCGCCAAGCTCGTTTTTCCCTGGTTTGAGTTTGGTGCAGTGGATGAACATGCAACAAAATAATCAGTTTTCTGCTGCTCAGTCTGGATTTTTCCCATCCATGGTCCCTCCAACCGGCCTGCAAAATAACCTTGGTACTGATGATCCATCCAAGTTGTTGAGTTTTCAAGCCCCGGTGCTGTCTTTGCCCAGTTTCCAGTCAAATAAATCAGCTCCACAAAACCATGCTAGTCAAATGCAGCAGCCAAATGTGACATGGGCTCAACAGCAGCAGCTGCAGCAGTTGATGTATAATCCTATGAACCAACAACAGCAAAGTAACCCCCAACAGCAGCAGCTGCAGCAATTATTGAATTCTTCGGCGAACCAACATCAGCAAAATCAGCCCCAGCACAGCAGCAGCAATTATTGCAGACTCCAACGAACCAACAGCTCCATAATTTCTCCCATCAGCAGCAGCAGCGGGAGCCTCAACAACAGCAAGAGCCACAAAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009791 GO:0009889 GO:0010015 GO:0010033 GO:0010101 GO:0010102 GO:0010311 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0046983 GO:0048364 GO:0048366 GO:0048367 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

AUX_IAA Auxin_resp B3

Protein Analysis

572

Amino Acids

63.92

Weight (kDa)

8.93

Isoelectric Point (pI)

67.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	127 - 228	1.7e-21	B3 DNA binding domain
BRWD_AD	PF25313	255 - 358	1.1e-06	BRWD/PHIP ancillary domain-like domain
ARF_AD	PF06507	276 - 358	3.7e-36	Auxin response factor ancillary domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008380)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19220 AT5G20730 AT5G20730 AT5G20730
fragaria_vesca	FvH4_1g09150 FvH4_1g09150 FvH4_1g09150
malus_domestica	MD02G1096700.v1.1 MD15G1221400.v1.1
prunus_persica	Prupe.7G194200_v2.0.a1 Prupe.7G194200_v2.0.a1
pyrus_communis	pycom02g07670
rosa_chinensis	RchiOBHm_Chr2g0095551
rosa_laevigata	RLG00000016578
rosa_multiflora	Rmu_sc0005382.1_g000007 Rmu_sc0038699.1_g000002
rosa_roxburghii	Rroxscaffold_2G00146200
rosa_rugosa	Rorug02G0052300
rosa_samantha	Rh2AG100100 Rh2BG101600 Rh2CG103700 Rh2DG101000
rosa_wichuraiana	Rw2G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	641, 1076
AarI	CACCTGC	2 cut(s)	496, 579
AasI	GACNNNNNNGTC	1 cut(s)	913
Acc36I	ACCTGC	2 cut(s)	496, 579
AccB1I	GGYRCC	1 cut(s)	567
AccB7I	CCANNNNNTGG	1 cut(s)	1188
AccI	GTMKAC	2 cut(s)	279, 863
AciI	CCGC	2 cut(s)	752, 1680
AclWI	GGATC	3 cut(s)	448, 959, 1355
AcsI	RAATTY	4 cut(s)	31, 824, 1202, 1570
AcuI	CTGAAG	2 cut(s)	930, 986
AfaI	GTAC	6 cut(s)	134, 432, 834, 848, 924, 1354
AfiI	CCNNNNNNNGG	7 cut(s)	17, 18, 116, 1188, 1193, 1318, 1331
AgsI	TTSAA	3 cut(s)	1053, 1385, 1570
AjnI	CCWGG	3 cut(s)	867, 1132, 1237
AloI	GAACNNNNNNTCC	2 cut(s)	615, 647
Alw21I	GWGCWC	1 cut(s)	413
Alw26I	GTCTC	2 cut(s)	176, 899
AlwI	GGATC	3 cut(s)	448, 959, 1355
AlwNI	CAGNNNCTG	3 cut(s)	947, 1492, 1555
AoxI	GGCC	6 cut(s)	92, 145, 346, 553, 1037, 1333
ApoI	RAATTY	4 cut(s)	31, 824, 1202, 1570
AseI	ATTAAT	1 cut(s)	63
Asp700I	GAANNNNTTC	1 cut(s)	64
AspLEI	GCGC	1 cut(s)	996
AspS9I	GGNCC	3 cut(s)	92, 346, 1321
AsuC2I	CCSGG	1 cut(s)	1391
AsuHPI	GGTGA	1 cut(s)	1043
AsuNHI	GCTAGC	1 cut(s)	398
AvaII	GGWCC	1 cut(s)	1321
BaeGI	GKGCMC	1 cut(s)	941
BanI	GGYRCC	1 cut(s)	567
BanII	GRGCYC	1 cut(s)	1480
BauI	CACGAG	1 cut(s)	406
Bbv12I	GWGCWC	1 cut(s)	413
BccI	CCATC	5 cut(s)	969, 1005, 1321, 1372, 1673
BceAI	ACGGC	1 cut(s)	581
BcgI	CGANNNNNNTGC	4 cut(s)	143, 177, 721, 755
BciT130I	CCWGG	3 cut(s)	869, 1134, 1239
BciVI	GTATCC	1 cut(s)	1162
BcnI	CCSGG	1 cut(s)	1391
BcoDI	GTCTC	2 cut(s)	176, 899
BfaI	CTAG	5 cut(s)	399, 467, 839, 1041, 1446
BfmI	CTRYAG	4 cut(s)	579, 756, 1493, 1556
BfuAI	ACCTGC	2 cut(s)	496, 579
BfuI	GTATCC	1 cut(s)	1162
Bme1390I	CCNGG	4 cut(s)	869, 1134, 1239, 1391
Bme18I	GGWCC	1 cut(s)	1321
BmgT120I	GGNCC	3 cut(s)	92, 346, 1321
BmiI	GGNNCC	4 cut(s)	9, 569, 1323, 1685
BmrFI	CCNGG	4 cut(s)	869, 1134, 1239, 1391
BmrI	ACTGGG	1 cut(s)	1401
BmsI	GCATC	5 cut(s)	162, 176, 344, 960, 1128
BmtI	GCTAGC	1 cut(s)	402
BmuI	ACTGGG	1 cut(s)	1401
BpmI	CTGGAG	1 cut(s)	642
Bpu10I	CCTNAGC	1 cut(s)	492
BpuMI	CCSGG	1 cut(s)	1391
Bsa29I	ATCGAT	2 cut(s)	170, 1161
BsaBI	GATNNNNATC	1 cut(s)	963
BsaJI	CCNNGG	8 cut(s)	806, 867, 1133, 1187, 1237, 1317, 1348, 1389
BsaWI	WCCGGW	1 cut(s)	112
BsaXI	ACNNNNNCTCC	2 cut(s)	615, 645
Bsc4I	CCNNNNNNNGG	7 cut(s)	17, 18, 116, 1188, 1193, 1318, 1331
Bse118I	RCCGGY	2 cut(s)	1035, 1331
Bse1I	ACTGG	5 cut(s)	302, 723, 952, 1407, 1414
Bse3DI	GCAATG	2 cut(s)	248, 326
Bse8I	GATNNNNATC	1 cut(s)	963
BseBI	CCWGG	3 cut(s)	869, 1134, 1239
BseCI	ATCGAT	2 cut(s)	170, 1161
BseDI	CCNNGG	8 cut(s)	806, 867, 1133, 1187, 1237, 1317, 1348, 1389
BseGI	GGATG	7 cut(s)	652, 1016, 1021, 1143, 1266, 1313, 1364
BseJI	GATNNNNATC	1 cut(s)	963
BseLI	CCNNNNNNNGG	7 cut(s)	17, 18, 116, 1188, 1193, 1318, 1331
BseMI	GCAATG	2 cut(s)	248, 326
BseMII	CTCAG	6 cut(s)	363, 364, 438, 506, 671, 1310
BseNI	ACTGG	5 cut(s)	302, 723, 952, 1407, 1414
BseRI	GAGGAG	1 cut(s)	1089
BseSI	GKGCMC	1 cut(s)	941
BseYI	CCCAGC	2 cut(s)	89, 1605
BsgI	GTGCAG	1 cut(s)	1274
BshFI	GGCC	6 cut(s)	94, 147, 348, 555, 1039, 1335
BshNI	GGYRCC	1 cut(s)	567
BshVI	ATCGAT	2 cut(s)	170, 1161
BsiHKAI	GWGCWC	1 cut(s)	413
BsiSI	CCGG	5 cut(s)	45, 113, 1036, 1332, 1391
BslFI	GGGAC	2 cut(s)	768, 1307
BslI	CCNNNNNNNGG	7 cut(s)	17, 18, 116, 1188, 1193, 1318, 1331
BsmAI	GTCTC	2 cut(s)	176, 899
BsmFI	GGGAC	2 cut(s)	768, 1307
BsmI	GAATGC	1 cut(s)	744
BsnI	GGCC	6 cut(s)	94, 147, 348, 555, 1039, 1335
Bsp1286I	GDGCHC	3 cut(s)	413, 941, 1480
Bsp143I	GATC	3 cut(s)	453, 964, 1360
Bsp19I	CCATGG	1 cut(s)	1317
BspACI	CCGC	2 cut(s)	752, 1680
BspANI	GGCC	6 cut(s)	94, 147, 348, 555, 1039, 1335
BspCNI	CTCAG	6 cut(s)	363, 364, 439, 505, 670, 1309
BspDI	ATCGAT	2 cut(s)	170, 1161
BspLI	GGNNCC	4 cut(s)	9, 569, 1323, 1685
BspMAI	CTGCAG	3 cut(s)	760, 1497, 1560
BspMI	ACCTGC	2 cut(s)	496, 579
BspOI	GCTAGC	1 cut(s)	402
BspPI	GGATC	3 cut(s)	448, 959, 1355
BspT107I	GGYRCC	1 cut(s)	567
BsrDI	GCAATG	2 cut(s)	248, 326
BsrFI	RCCGGY	2 cut(s)	1035, 1331
BsrI	ACTGG	5 cut(s)	302, 723, 952, 1407, 1414
BssAI	RCCGGY	2 cut(s)	1035, 1331
BssECI	CCNNGG	8 cut(s)	806, 867, 1133, 1187, 1237, 1317, 1348, 1389
BssMI	GATC	3 cut(s)	453, 964, 1360
BssNAI	GTATAC	1 cut(s)	864
BssSI	CACGAG	1 cut(s)	406
BssT1I	CCWWGG	4 cut(s)	806, 1187, 1317, 1348
Bst1107I	GTATAC	1 cut(s)	864
Bst2BI	CACGAG	1 cut(s)	406
Bst2UI	CCWGG	3 cut(s)	869, 1134, 1239
Bst4CI	ACNGT	2 cut(s)	782, 943
Bst6I	CTCTTC	1 cut(s)	906
BstAPI	GCANNNNNTGC	4 cut(s)	764, 1492, 1555, 1626
BstDEI	CTNAG	6 cut(s)	350, 372, 447, 492, 657, 1296
BstDSI	CCRYGG	1 cut(s)	1317
BstEII	GGTNACC	1 cut(s)	1031
BstF5I	GGATG	7 cut(s)	652, 1016, 1021, 1143, 1266, 1313, 1364
BstHHI	GCGC	1 cut(s)	996
BstKTI	GATC	3 cut(s)	456, 967, 1363
BstMAI	GTCTC	2 cut(s)	176, 899
BstMBI	GATC	3 cut(s)	453, 964, 1360
BstNI	CCWGG	3 cut(s)	869, 1134, 1239
BstNSI	RCATGY	6 cut(s)	83, 235, 257, 736, 886, 1270
BstPI	GGTNACC	1 cut(s)	1031
BstSCI	CCNGG	4 cut(s)	867, 1132, 1237, 1389
BstSFI	CTRYAG	4 cut(s)	579, 756, 1493, 1556
BstSLI	GKGCMC	1 cut(s)	941
BstX2I	RGATCY	1 cut(s)	453
BstYI	RGATCY	1 cut(s)	453
BstZ17I	GTATAC	1 cut(s)	864
Bsu15I	ATCGAT	2 cut(s)	170, 1161
BsuI	GTATCC	1 cut(s)	1162
BsuRI	GGCC	6 cut(s)	94, 147, 348, 555, 1039, 1335
BsuTUI	ATCGAT	2 cut(s)	170, 1161
BtgI	CCRYGG	1 cut(s)	1317
BtgZI	GCGATG	1 cut(s)	872
BtsCI	GGATG	7 cut(s)	652, 1016, 1021, 1143, 1266, 1313, 1364
BtsI	GCAGTG	2 cut(s)	995, 1262
BtsIMutI	CAGTG	4 cut(s)	730, 945, 995, 1262
BveI	ACCTGC	2 cut(s)	496, 579
CaiI	CAGNNNCTG	3 cut(s)	947, 1492, 1555
CfoI	GCGC	1 cut(s)	996
Cfr10I	RCCGGY	2 cut(s)	1035, 1331
Cfr13I	GGNCC	3 cut(s)	92, 346, 1321
ClaI	ATCGAT	2 cut(s)	170, 1161
Csp6I	GTAC	6 cut(s)	133, 431, 833, 847, 923, 1353
CspCI	CAANNNNNGTGG	1 cut(s)	1694
CviQI	GTAC	6 cut(s)	133, 431, 833, 847, 923, 1353
DdeI	CTNAG	6 cut(s)	350, 372, 447, 492, 657, 1296
DpnI	GATC	3 cut(s)	455, 966, 1362
DpnII	GATC	3 cut(s)	453, 964, 1360
DrdI	GACNNNNNNGTC	1 cut(s)	913
DseDI	GACNNNNNNGTC	1 cut(s)	913
Eam1104I	CTCTTC	1 cut(s)	906
EarI	CTCTTC	1 cut(s)	906
Eco130I	CCWWGG	4 cut(s)	806, 1187, 1317, 1348
Eco24I	GRGCYC	1 cut(s)	1480
Eco47I	GGWCC	1 cut(s)	1321
Eco57I	CTGAAG	2 cut(s)	930, 986
Eco91I	GGTNACC	1 cut(s)	1031
EcoO65I	GGTNACC	1 cut(s)	1031
EcoRI	GAATTC	1 cut(s)	1570
EcoRII	CCWGG	3 cut(s)	867, 1132, 1237
EcoT14I	CCWWGG	4 cut(s)	806, 1187, 1317, 1348
EcoT22I	ATGCAT	2 cut(s)	233, 738
EcoT38I	GRGCYC	1 cut(s)	1480
ErhI	CCWWGG	4 cut(s)	806, 1187, 1317, 1348
FaqI	GGGAC	2 cut(s)	768, 1307
FauI	CCCGC	1 cut(s)	1673
FauNDI	CATATG	1 cut(s)	1091
FblI	GTMKAC	2 cut(s)	279, 863
FokI	GGATG	7 cut(s)	659, 1023, 1028, 1150, 1273, 1300, 1351
FriOI	GRGCYC	1 cut(s)	1480
FspBI	CTAG	5 cut(s)	399, 467, 839, 1041, 1446
GlaI	GCGC	1 cut(s)	995
GsaI	CCCAGC	2 cut(s)	93, 1609
GsuI	CTGGAG	1 cut(s)	642
HaeIII	GGCC	6 cut(s)	94, 147, 348, 555, 1039, 1335
HapII	CCGG	5 cut(s)	45, 113, 1036, 1332, 1391
HhaI	GCGC	1 cut(s)	996
Hin6I	GCGC	1 cut(s)	994
HinP1I	GCGC	1 cut(s)	994
HinfI	GANTC	7 cut(s)	292, 612, 626, 888, 914, 1019, 1632
HpaII	CCGG	5 cut(s)	45, 113, 1036, 1332, 1391
HphI	GGTGA	1 cut(s)	1043
Hpy166II	GTNNAC	5 cut(s)	133, 280, 307, 531, 864
Hpy188I	TCNGA	7 cut(s)	70, 340, 353, 823, 893, 1112, 1156
Hpy188III	TCNNGA	5 cut(s)	467, 494, 918, 1174, 1302
Hpy8I	GTNNAC	5 cut(s)	133, 280, 307, 531, 864
HpyAV	CCTTC	2 cut(s)	313, 828
HpyCH4III	ACNGT	2 cut(s)	782, 943
HpyF3I	CTNAG	6 cut(s)	350, 372, 447, 492, 657, 1296
HspAI	GCGC	1 cut(s)	994
Kzo9I	GATC	3 cut(s)	453, 964, 1360
LmnI	GCTCC	4 cut(s)	496, 1435, 1655, 1683
LweI	GCATC	5 cut(s)	162, 176, 344, 960, 1128
MaeI	CTAG	5 cut(s)	399, 467, 839, 1041, 1446
MaeIII	GTNAC	5 cut(s)	244, 943, 1031, 1468, 1535
MalI	GATC	3 cut(s)	455, 966, 1362
MboI	GATC	3 cut(s)	453, 964, 1360
MboII	GAAGA	6 cut(s)	203, 463, 923, 992, 1225, 1566
MflI	RGATCY	1 cut(s)	453
MhlI	GDGCHC	3 cut(s)	413, 941, 1480
MlyI	GAGTC	4 cut(s)	286, 606, 923, 1626
MmeI	TCCRAC	7 cut(s)	97, 322, 566, 988, 1179, 1352, 1660
Mph1103I	ATGCAT	2 cut(s)	233, 738
MroXI	GAANNNNTTC	1 cut(s)	64
MseI	TTAA	1 cut(s)	63
MslI	CAYNNNNRTG	2 cut(s)	84, 522
MspA1I	CMGCKG	5 cut(s)	446, 1028, 1492, 1555, 1680
MspI	CCGG	5 cut(s)	45, 113, 1036, 1332, 1391
MspR9I	CCNGG	4 cut(s)	869, 1134, 1239, 1391
Mva1269I	GAATGC	1 cut(s)	744
MvaI	CCWGG	3 cut(s)	869, 1134, 1239
NciI	CCSGG	1 cut(s)	1391
NcoI	CCATGG	1 cut(s)	1317
NdeI	CATATG	1 cut(s)	1091
NdeII	GATC	3 cut(s)	453, 964, 1360
NheI	GCTAGC	1 cut(s)	398
NlaIV	GGNNCC	4 cut(s)	9, 569, 1323, 1685
NmeAIII	GCCGAG	1 cut(s)	1070
NmuCI	GTSAC	4 cut(s)	244, 943, 1031, 1468
NsiI	ATGCAT	2 cut(s)	233, 738
NspI	RCATGY	6 cut(s)	83, 235, 257, 736, 886, 1270
PaeI	GCATGC	5 cut(s)	83, 235, 257, 736, 886
PaqCI	CACCTGC	2 cut(s)	496, 579
PcsI	WCGNNNNNNNCGW	1 cut(s)	1226
PctI	GAATGC	1 cut(s)	744
PdmI	GAANNNNTTC	1 cut(s)	64
PfeI	GAWTC	3 cut(s)	626, 888, 1019
PflMI	CCANNNNNTGG	1 cut(s)	1188
PleI	GAGTC	4 cut(s)	286, 606, 922, 1626
PpsI	GAGTC	4 cut(s)	286, 606, 922, 1626
PshBI	ATTAAT	1 cut(s)	63
PsiI	TTATAA	2 cut(s)	641, 1076
Psp6I	CCWGG	3 cut(s)	867, 1132, 1237
PspEI	GGTNACC	1 cut(s)	1031
PspFI	CCCAGC	2 cut(s)	89, 1605
PspGI	CCWGG	3 cut(s)	867, 1132, 1237
PspN4I	GGNNCC	4 cut(s)	9, 569, 1323, 1685
PspPI	GGNCC	3 cut(s)	92, 346, 1321
PstI	CTGCAG	3 cut(s)	760, 1497, 1560
PstNI	CAGNNNCTG	3 cut(s)	947, 1492, 1555
PsuI	RGATCY	1 cut(s)	453
PvuII	CAGCTG	4 cut(s)	446, 1028, 1492, 1555
RsaI	GTAC	6 cut(s)	134, 432, 834, 848, 924, 1354
RsaNI	GTAC	6 cut(s)	133, 431, 833, 847, 923, 1353
RseI	CAYNNNNRTG	2 cut(s)	84, 522
SaqAI	TTAA	1 cut(s)	63
Sau3AI	GATC	3 cut(s)	453, 964, 1360
Sau96I	GGNCC	3 cut(s)	92, 346, 1321
SchI	GAGTC	4 cut(s)	286, 606, 923, 1626
ScrFI	CCNGG	4 cut(s)	869, 1134, 1239, 1391
SduI	GDGCHC	3 cut(s)	413, 941, 1480
SfaNI	GCATC	5 cut(s)	162, 176, 344, 960, 1128
SfcI	CTRYAG	4 cut(s)	579, 756, 1493, 1556
SinI	GGWCC	1 cut(s)	1321
SmiMI	CAYNNNNRTG	2 cut(s)	84, 522
SphI	GCATGC	5 cut(s)	83, 235, 257, 736, 886
SsiI	CCGC	2 cut(s)	752, 1680
SspMI	CTAG	5 cut(s)	399, 467, 839, 1041, 1446
StyD4I	CCNGG	4 cut(s)	867, 1132, 1237, 1389
StyI	CCWWGG	4 cut(s)	806, 1187, 1317, 1348
TaaI	ACNGT	2 cut(s)	782, 943
TaqI	TCGA	5 cut(s)	170, 550, 963, 973, 1161
TatI	WGTACW	2 cut(s)	132, 846
TauI	GCSGC	1 cut(s)	755
TfiI	GAWTC	3 cut(s)	626, 888, 1019
Tru1I	TTAA	1 cut(s)	63
Tru9I	TTAA	1 cut(s)	63
TscAI	CASTG	4 cut(s)	730, 952, 995, 1262
TseFI	GTSAC	4 cut(s)	244, 943, 1031, 1468
Tsp45I	GTSAC	4 cut(s)	244, 943, 1031, 1468
TspDTI	ATGAA	8 cut(s)	17, 181, 663, 1032, 1215, 1226, 1277, 1532
TspGWI	ACGGA	1 cut(s)	204
TspRI	CASTG	4 cut(s)	730, 952, 995, 1262
Van91I	CCANNNNNTGG	1 cut(s)	1188
VpaK11BI	GGWCC	1 cut(s)	1321
VspI	ATTAAT	1 cut(s)	63
XapI	RAATTY	4 cut(s)	31, 824, 1202, 1570
XbaI	TCTAGA	1 cut(s)	466
XceI	RCATGY	6 cut(s)	83, 235, 257, 736, 886, 1270
XcmI	CCANNNNNNNNNTGG	2 cut(s)	875, 1470
XmiI	GTMKAC	2 cut(s)	279, 863
XmnI	GAANNNNTTC	1 cut(s)	64
XspI	CTAG	5 cut(s)	399, 467, 839, 1041, 1446
Zsp2I	ATGCAT	2 cut(s)	233, 738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.