AT1G19300

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
6671095 .. 6672777
1683 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G19300.1

Sequence Viewer

Length: 1056 bp
ATGTCCCAACATCTTCTTCTTCTCATTCTCCTCTCGCTACTTCTTCTTCATAAACCCATTTCCGCCACTACAATTATTCAAAAATTCAAAGAAGCCCCACAGTTTTACAATTCTGCAGATTGCCCCTTAATCGATGACTCCGAGTCCGACGATGACGTGGTCGCCAAACCAATCTTCTGCTCACGTCGAGCTGTCCACGTGGCGATGACACTCGACGCCGCCTACATTCGTGGCTCAGTCGCCGCTGTTCTCTCCGTCCTCCAACACTCTTCTTGTCCTGAAAACATTGTTTTCCACTTCGTCGCCTCTGCTTCCGCCGACGCTTCTTCCTTACGAGCCACCATATCCTCCTCTTTCCCTTACCTTGATTTCACCGTCTACGTCTTCAACGTCTCCTCCGTCTCTCGCCTTATCTCCTCCTCTATCCGCTCCGCACTAGACTGTCCTTTAAACTACGCAAGAAGCTACCTCGCCGATCTCCTCCCTCCCTGCGTCCGCCGCGTCGTCTACCTAGACTCCGATCTGATCCTCGTCGACGACATAGCAAAACTCGCCGCCACAGATCTCGGCCGTGATTCAGTCCTCGCCGCGCCGGAATACTGCAACGCCAATTTCACTTCATACTTCACATCAACCTTCTGGTCTAATCCGACTCTCTCTTTAACCTTCGCCGATCGGAAAGCATGCTACTTCAACACTGGAGTCATGGTGATCGATCTTTCCCGGTGGCGCGAAGGCGCGTACACGTCACGCATCGAAGAGTGGATGGCGATGCAAAAGAGAATGAGAATTTACGAGCTTGGTTCGTTACCACCGTTTTTATTGGTTTTTGCCGGTTTGATTAAACCGGTTAATCATCGGTGGAACCAACACGGTTTAGGAGGTGATAATTTCAGAGGACTGTGTAGAGATCTCCATCCTGGTCCGGTGAGTCTGTTGCATTGGAGTGGGAAAGGTAAGCCATGGGCTAGGCTTGATGCTGGTCGGCCTTGTCCTTTAGACGCGCTTTGGGCTCCGTATGATCTTCTTCAAACGCCGTTCGCGTTGGATTCTTGA

Protein Analysis

351

Amino Acids

39.02

Weight (kDa)

6.49

Isoelectric Point (pI)

45.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 66 - 324 1.1e-49 Glycosyl transferase family 8
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013972)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19300
fragaria_vesca FvH4_2g40370
malus_domestica MD08G1036800.v1.1
prunus_persica Prupe.1G384100_v2.0.a1
pyrus_communis pycom08g02940 pycom15g02880
rosa_chinensis RchiOBHm_Chr6g0300381
rosa_laevigata RLG00000011343
rosa_multiflora Rmu_co8373719.1_g000001 Rmu_sc0001670.1_g000014
rosa_roxburghii Rroxscaffold_7G00167850
rosa_rugosa Rorug06G0295500
rosa_samantha Rh6AG408200 Rh6BG415500 Rh6CG422900 Rh6DG408500
rosa_wichuraiana Rw6G035700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 429
AccI GTMKAC 3 cut(s) 378, 507, 534
AccII CGCG 6 cut(s) 501, 590, 732, 740, 1004, 1043
AclWI GGATC 1 cut(s) 520
AcoI YGGCCR 1 cut(s) 568
AcsI RAATTY 2 cut(s) 83, 789
AcvI CACGTG 1 cut(s) 199
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 1 cut(s) 743
AflIII ACRYGT 1 cut(s) 744
AgeI ACCGGT 1 cut(s) 847
AgsI TTSAA 5 cut(s) 80, 88, 388, 694, 1031
AhdI GACNNNNNGTC 1 cut(s) 142
AjiI CACGTC 3 cut(s) 157, 185, 747
AjnI CCWGG 1 cut(s) 919
AjuI GAANNNNNNNTTGG 3 cut(s) 32, 158, 190
AluBI AGCT 3 cut(s) 191, 465, 799
AluI AGCT 3 cut(s) 191, 465, 799
Alw26I GTCTC 2 cut(s) 397, 406
AlwI GGATC 1 cut(s) 520
AoxI GGCC 2 cut(s) 568, 986
ApoI RAATTY 2 cut(s) 83, 789
AsiGI ACCGGT 1 cut(s) 847
AspLEI GCGC 4 cut(s) 592, 732, 740, 1006
AspS9I GGNCC 1 cut(s) 923
AsuC2I CCSGG 1 cut(s) 724
AsuHPI GGTGA 4 cut(s) 364, 721, 896, 940
AvaII GGWCC 1 cut(s) 923
BanII GRGCYC 1 cut(s) 1015
BbrPI CACGTG 1 cut(s) 199
BbsI GAAGAC 1 cut(s) 376
BccI CCATC 2 cut(s) 760, 924
BceAI ACGGC 2 cut(s) 555, 1021
BciT130I CCWGG 1 cut(s) 921
BcnI CCSGG 1 cut(s) 724
BcoDI GTCTC 2 cut(s) 397, 406
BfaI CTAG 3 cut(s) 437, 512, 969
BfmI CTRYAG 1 cut(s) 114
BglII AGATCT 2 cut(s) 562, 910
BisI GCNGC 5 cut(s) 219, 243, 499, 555, 588
BlsI GCNGC 5 cut(s) 220, 244, 500, 556, 589
Bme1390I CCNGG 2 cut(s) 724, 921
Bme18I GGWCC 1 cut(s) 923
BmeRI GACNNNNNGTC 1 cut(s) 142
BmgBI CACGTC 3 cut(s) 157, 185, 747
BmgT120I GGNCC 1 cut(s) 923
BmiI GGNNCC 2 cut(s) 866, 1014
BmrFI CCNGG 2 cut(s) 724, 921
BmsI GCATC 3 cut(s) 762, 762, 967
BpiI GAAGAC 1 cut(s) 376
BpmI CTGGAG 1 cut(s) 720
BpuMI CCSGG 1 cut(s) 724
Bsa29I ATCGAT 2 cut(s) 132, 714
BsaAI YACGTR 1 cut(s) 199
BsaBI GATNNNNATC 1 cut(s) 915
BsaHI GRCGYC 1 cut(s) 216
BsaJI CCNNGG 1 cut(s) 962
BsaWI WCCGGW 2 cut(s) 847, 925
BsaXI ACNNNNNCTCC 6 cut(s) 380, 410, 500, 530, 693, 723
Bse118I RCCGGY 2 cut(s) 833, 847
Bse1I ACTGG 1 cut(s) 703
Bse8I GATNNNNATC 1 cut(s) 915
BseBI CCWGG 1 cut(s) 921
BseCI ATCGAT 2 cut(s) 132, 714
BseDI CCNNGG 1 cut(s) 962
BseGI GGATG 2 cut(s) 771, 916
BseJI GATNNNNATC 1 cut(s) 915
BseMII CTCAG 1 cut(s) 249
BseNI ACTGG 1 cut(s) 703
BseRI GAGGAG 6 cut(s) 20, 340, 385, 406, 409, 470
BseX3I CGGCCG 1 cut(s) 568
Bsh1236I CGCG 6 cut(s) 501, 590, 732, 740, 1004, 1043
Bsh1285I CGRYCG 2 cut(s) 571, 676
BshFI GGCC 2 cut(s) 570, 988
BshTI ACCGGT 1 cut(s) 847
BshVI ATCGAT 2 cut(s) 132, 714
BsiEI CGRYCG 2 cut(s) 571, 676
BsiSI CCGG 5 cut(s) 593, 724, 834, 848, 926
BsmAI GTCTC 2 cut(s) 397, 406
BsmBI CGTCTC 2 cut(s) 397, 406
BsnI GGCC 2 cut(s) 570, 988
Bsp1286I GDGCHC 1 cut(s) 1015
Bsp143I GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
Bsp19I CCATGG 1 cut(s) 962
BspANI GGCC 2 cut(s) 570, 988
BspCNI CTCAG 1 cut(s) 248
BspDI ATCGAT 2 cut(s) 132, 714
BspFNI CGCG 6 cut(s) 501, 590, 732, 740, 1004, 1043
BspLI GGNNCC 2 cut(s) 866, 1014
BspMAI CTGCAG 1 cut(s) 118
BspPI GGATC 1 cut(s) 520
BsrBI CCGCTC 1 cut(s) 429
BsrFI RCCGGY 2 cut(s) 833, 847
BsrI ACTGG 1 cut(s) 703
BssAI RCCGGY 2 cut(s) 833, 847
BssECI CCNNGG 1 cut(s) 962
BssMI GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
BssNI GRCGYC 1 cut(s) 216
BssT1I CCWWGG 1 cut(s) 962
Bst2UI CCWGG 1 cut(s) 921
Bst4CI ACNGT 6 cut(s) 102, 376, 443, 816, 875, 903
Bst6I CTCTTC 2 cut(s) 274, 753
BstACI GRCGYC 1 cut(s) 216
BstBAI YACGTR 1 cut(s) 199
BstC8I GCNNGC 1 cut(s) 685
BstDEI CTNAG 1 cut(s) 235
BstDSI CCRYGG 1 cut(s) 962
BstF5I GGATG 2 cut(s) 771, 916
BstFNI CGCG 6 cut(s) 501, 590, 732, 740, 1004, 1043
BstHHI GCGC 4 cut(s) 592, 732, 740, 1006
BstKTI GATC 9 cut(s) 478, 523, 528, 565, 676, 714, 718, 913, 1024
BstMAI GTCTC 2 cut(s) 397, 406
BstMBI GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
BstMCI CGRYCG 2 cut(s) 571, 676
BstMWI GCNNNNNNNGC 3 cut(s) 498, 551, 1010
BstNI CCWGG 1 cut(s) 921
BstNSI RCATGY 1 cut(s) 687
BstSCI CCNGG 2 cut(s) 722, 919
BstSFI CTRYAG 1 cut(s) 114
BstUI CGCG 6 cut(s) 501, 590, 732, 740, 1004, 1043
BstV2I GAAGAC 1 cut(s) 376
BstX2I RGATCY 2 cut(s) 562, 910
BstYI RGATCY 2 cut(s) 562, 910
BstZI CGGCCG 1 cut(s) 568
Bsu15I ATCGAT 2 cut(s) 132, 714
BsuRI GGCC 2 cut(s) 570, 988
BsuTUI ATCGAT 2 cut(s) 132, 714
BtgI CCRYGG 1 cut(s) 962
BtgZI GCGATG 2 cut(s) 218, 785
BtrI CACGTC 3 cut(s) 157, 185, 747
BtsCI GGATG 2 cut(s) 771, 916
BtsIMutI CAGTG 1 cut(s) 696
Cac8I GCNNGC 1 cut(s) 685
CfoI GCGC 4 cut(s) 592, 732, 740, 1006
Cfr10I RCCGGY 2 cut(s) 833, 847
Cfr13I GGNCC 1 cut(s) 923
ClaI ATCGAT 2 cut(s) 132, 714
CseI GACGC 5 cut(s) 224, 329, 481, 490, 1010
Csp6I GTAC 1 cut(s) 742
CspAI ACCGGT 1 cut(s) 847
CviAII CATG 3 cut(s) 684, 706, 963
CviQI GTAC 1 cut(s) 742
DdeI CTNAG 1 cut(s) 235
DpnI GATC 9 cut(s) 477, 522, 527, 564, 675, 713, 717, 912, 1023
DpnII GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
DraI TTTAAA 1 cut(s) 450
DriI GACNNNNNGTC 1 cut(s) 142
EaeI YGGCCR 1 cut(s) 568
EagI CGGCCG 1 cut(s) 568
Eam1104I CTCTTC 2 cut(s) 274, 753
Eam1105I GACNNNNNGTC 1 cut(s) 142
EarI CTCTTC 2 cut(s) 274, 753
EciI GGCGGA 3 cut(s) 52, 304, 485
EclXI CGGCCG 1 cut(s) 568
Eco130I CCWWGG 1 cut(s) 962
Eco24I GRGCYC 1 cut(s) 1015
Eco47I GGWCC 1 cut(s) 923
Eco52I CGGCCG 1 cut(s) 568
Eco72I CACGTG 1 cut(s) 199
EcoRII CCWGG 1 cut(s) 919
EcoT14I CCWWGG 1 cut(s) 962
EcoT38I GRGCYC 1 cut(s) 1015
ErhI CCWWGG 1 cut(s) 962
Esp3I CGTCTC 2 cut(s) 397, 406
FaeI CATG 3 cut(s) 687, 709, 966
FaiI YATR 8 cut(s) 51, 344, 542, 622, 685, 707, 964, 1020
FatI CATG 3 cut(s) 683, 705, 962
FblI GTMKAC 3 cut(s) 378, 507, 534
Fnu4HI GCNGC 5 cut(s) 219, 243, 499, 555, 588
FokI GGATG 2 cut(s) 778, 903
FriOI GRGCYC 1 cut(s) 1015
Fsp4HI GCNGC 5 cut(s) 219, 243, 499, 555, 588
FspBI CTAG 3 cut(s) 437, 512, 969
GlaI GCGC 4 cut(s) 591, 731, 739, 1005
GluI GCNGC 5 cut(s) 219, 243, 499, 555, 588
GsuI CTGGAG 1 cut(s) 720
HaeIII GGCC 2 cut(s) 570, 988
HapII CCGG 5 cut(s) 593, 724, 834, 848, 926
HgaI GACGC 5 cut(s) 224, 329, 481, 490, 1010
HhaI GCGC 4 cut(s) 592, 732, 740, 1006
Hin1I GRCGYC 1 cut(s) 216
Hin1II CATG 3 cut(s) 687, 709, 966
Hin6I GCGC 4 cut(s) 590, 730, 738, 1004
HinP1I GCGC 4 cut(s) 590, 730, 738, 1004
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HinfI GANTC 8 cut(s) 137, 143, 515, 575, 652, 702, 931, 1049
HpaII CCGG 5 cut(s) 593, 724, 834, 848, 926
HphI GGTGA 4 cut(s) 364, 721, 896, 940
Hpy166II GTNNAC 5 cut(s) 196, 379, 508, 535, 744
Hpy188I TCNGA 7 cut(s) 142, 148, 520, 525, 651, 678, 896
Hpy188III TCNNGA 2 cut(s) 278, 1053
Hpy8I GTNNAC 5 cut(s) 196, 379, 508, 535, 744
Hpy99I CGWCG 8 cut(s) 152, 189, 218, 305, 323, 506, 536, 539
HpyAV CCTTC 3 cut(s) 646, 676, 728
HpyCH4III ACNGT 6 cut(s) 102, 376, 443, 816, 875, 903
HpyCH4IV ACGT 6 cut(s) 156, 184, 198, 381, 390, 746
HpyCH4V TGCA 4 cut(s) 116, 603, 775, 940
HpyF10VI GCNNNNNNNGC 3 cut(s) 498, 551, 1010
HpyF3I CTNAG 1 cut(s) 235
HpySE526I ACGT 6 cut(s) 156, 184, 198, 381, 390, 746
Hsp92I GRCGYC 1 cut(s) 216
Hsp92II CATG 3 cut(s) 687, 709, 966
HspAI GCGC 4 cut(s) 590, 730, 738, 1004
Kzo9I GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
LmnI GCTCC 2 cut(s) 434, 1018
LweI GCATC 3 cut(s) 762, 762, 967
MaeI CTAG 3 cut(s) 437, 512, 969
MaeII ACGT 6 cut(s) 156, 184, 198, 381, 390, 746
MaeIII GTNAC 2 cut(s) 747, 807
MalI GATC 9 cut(s) 477, 522, 527, 564, 675, 713, 717, 912, 1023
MbiI CCGCTC 1 cut(s) 429
MboI GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
MflI RGATCY 2 cut(s) 562, 910
MhlI GDGCHC 1 cut(s) 1015
MluCI AATT 6 cut(s) 72, 83, 109, 610, 789, 889
MlyI GAGTC 6 cut(s) 131, 152, 509, 646, 711, 940
MmeI TCCRAC 4 cut(s) 171, 286, 674, 1026
MseI TTAA 5 cut(s) 128, 449, 662, 843, 852
MslI CAYNNNNRTG 1 cut(s) 945
MspA1I CMGCKG 1 cut(s) 245
MspI CCGG 5 cut(s) 593, 724, 834, 848, 926
MspR9I CCNGG 2 cut(s) 724, 921
MvaI CCWGG 1 cut(s) 921
MvnI CGCG 6 cut(s) 501, 590, 732, 740, 1004, 1043
MwoI GCNNNNNNNGC 3 cut(s) 498, 551, 1010
NciI CCSGG 1 cut(s) 724
NcoI CCATGG 1 cut(s) 962
NdeII GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
NlaIII CATG 3 cut(s) 687, 709, 966
NlaIV GGNNCC 2 cut(s) 866, 1014
NmeAIII GCCGAG 1 cut(s) 546
NmuCI GTSAC 1 cut(s) 747
NspI RCATGY 1 cut(s) 687
PaeI GCATGC 1 cut(s) 687
PcsI WCGNNNNNNNCGW 5 cut(s) 138, 387, 396, 812, 1040
PfeI GAWTC 2 cut(s) 575, 1049
PflFI GACNNNGTC 1 cut(s) 158
PinAI ACCGGT 1 cut(s) 847
PkrI GCNGC 5 cut(s) 220, 244, 500, 556, 589
Ple19I CGATCG 1 cut(s) 676
PleI GAGTC 6 cut(s) 131, 151, 509, 646, 710, 939
PmaCI CACGTG 1 cut(s) 199
PmlI CACGTG 1 cut(s) 199
PpsI GAGTC 6 cut(s) 131, 151, 509, 646, 710, 939
Ppu21I YACGTR 1 cut(s) 199
Psp6I CCWGG 1 cut(s) 919
PspCI CACGTG 1 cut(s) 199
PspGI CCWGG 1 cut(s) 919
PspN4I GGNNCC 2 cut(s) 866, 1014
PspPI GGNCC 1 cut(s) 923
PstI CTGCAG 1 cut(s) 118
PsuI RGATCY 2 cut(s) 562, 910
PsyI GACNNNGTC 1 cut(s) 158
PvuI CGATCG 1 cut(s) 676
RsaI GTAC 1 cut(s) 743
RsaNI GTAC 1 cut(s) 742
RseI CAYNNNNRTG 1 cut(s) 945
SalI GTCGAC 1 cut(s) 533
SaqAI TTAA 5 cut(s) 128, 449, 662, 843, 852
SatI GCNGC 5 cut(s) 219, 243, 499, 555, 588
Sau3AI GATC 9 cut(s) 475, 520, 525, 562, 673, 711, 715, 910, 1021
Sau96I GGNCC 1 cut(s) 923
SchI GAGTC 6 cut(s) 131, 152, 509, 646, 711, 940
ScrFI CCNGG 2 cut(s) 724, 921
SduI GDGCHC 1 cut(s) 1015
SfaNI GCATC 3 cut(s) 762, 762, 967
SfcI CTRYAG 1 cut(s) 114
SgrDI CGTCGACG 1 cut(s) 533
SinI GGWCC 1 cut(s) 923
SmiMI CAYNNNNRTG 1 cut(s) 945
SphI GCATGC 1 cut(s) 687
Sse9I AATT 6 cut(s) 72, 83, 109, 610, 789, 889
SspMI CTAG 3 cut(s) 437, 512, 969
StyD4I CCNGG 2 cut(s) 722, 919
StyI CCWWGG 1 cut(s) 962
TaaI ACNGT 6 cut(s) 102, 376, 443, 816, 875, 903
TaiI ACGT 6 cut(s) 159, 187, 201, 384, 393, 749
TaqI TCGA 6 cut(s) 132, 187, 213, 534, 714, 756
TasI AATT 6 cut(s) 72, 83, 109, 610, 789, 889
TauI GCSGC 5 cut(s) 221, 245, 501, 557, 590
TfiI GAWTC 2 cut(s) 575, 1049
Tru1I TTAA 5 cut(s) 128, 449, 662, 843, 852
Tru9I TTAA 5 cut(s) 128, 449, 662, 843, 852
TscAI CASTG 1 cut(s) 703
TseFI GTSAC 1 cut(s) 747
Tsp45I GTSAC 1 cut(s) 747
TspDTI ATGAA 2 cut(s) 38, 609
TspGWI ACGGA 3 cut(s) 244, 388, 1005
TspRI CASTG 1 cut(s) 703
Tth111I GACNNNGTC 1 cut(s) 158
VpaK11BI GGWCC 1 cut(s) 923
XapI RAATTY 2 cut(s) 83, 789
XceI RCATGY 1 cut(s) 687
XmiI GTMKAC 3 cut(s) 378, 507, 534
XspI CTAG 3 cut(s) 437, 512, 969
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.