Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013972

Physical Location & Seq

Genomic Coordinates Forward (+)

34476932 .. 34478579

Gene Structure 1648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G384100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1122 bp

ATGCCTCTCCCTCAGCCACCACCACTCCTCCCCCTCCTCCTCCTCGTTGCCTTCCTCATCCTTCTACTTCCCGCTCCCTCAGTCTCTGCCGCTACCACAAGCACATCCAATGCCACCACCACCACCACCCAACAATTTAGGGAAGCCCCTCAATTCTACAACTCCCCAGACTGCCCTTCCATCACCCCCCTCCACCACGACGACTTGGACCCCGACGAATCAGACGATGACCACATGATGATCTGCGCCTATCAGGCCGTCCATGTGGCAATGACACTCGACACCGCCTACATCCGCGGCTCCATGGCCGCCATCCTGTCCGTCCTCCAACATTCATCCTGCCCTCAGAACGCCGTCTTCCACTTTGTCGCCTCCGCCACCTCCAACGCCTCCCTACTCCGCGACACAATCTCCTCCTCCTTCCCGTACCTGAAATTCCGAATCTACCCCTTCGACGACTCCCACGTCTCCGGCCTCATCTCCATCTCCATCCGCTCCGCTCTCGACTGCCCCCTCAACTACGCCCGCAGCTACCTCGCCGACCTCCTCCCCCTCTGCGTACGACGCGTCGTCTACCTCGACTCCGACCTCATCCTAGTCGACGACATTGCCAAGCTCGCCGCCACCCCCCTCGGCCCCTCCTCCGTCCTCGCCGCCCCCGAGTACTGCAACGCCAACTTCACTACCTATTTTACCCCTGCCTTCTGGTCCAACCCCTCCCTCTCCCTCACCTTCGCCGACCGCAAGGCCTGCTACTTCAACACCGGCGTTATGGTCATCGACCTCGACCGCTGGAGAGGCGGCGACTACACCACGAAGATCGAGGAGTGGATGGAGCTGCAGAAGCGGATGAGAATCTACGAGCTCGGCTCGCTACCGCCGTTTCTGCTGGTGTTCGCCGGAAACATAGCGCCGGTGGAGCATAGGTGGAACCAGCACGGGCTCGGAGGTGACAACTTCAGAGGGCTTTGCAGAGATCTGCATCCTGGTTCAGTGAGTTTGTTGCATTGGAGCGGGAAGGGAAAGCCATGGGCGAGGCTCGAGGCCAACAGGCCTTGCCCTCTGGATGCTCTCTGGGCTCCTTATGATCTCTTGGTAACGCCATTTGTTTTGGATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0003002 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009987 GO:0010051 GO:0010383 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0032501 GO:0032502 GO:0032504 GO:0033692 GO:0034637 GO:0034645 GO:0042545 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0045491 GO:0045492 GO:0047262 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0052386 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0099402 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

374

Amino Acids

41.34

Weight (kDa)

5.37

Isoelectric Point (pI)

46.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19300
fragaria_vesca	FvH4_2g40370
malus_domestica	MD08G1036800.v1.1
prunus_persica	Prupe.1G384100_v2.0.a1
pyrus_communis	pycom08g02940 pycom15g02880
rosa_chinensis	RchiOBHm_Chr6g0300381
rosa_laevigata	RLG00000011343
rosa_multiflora	Rmu_co8373719.1_g000001 Rmu_sc0001670.1_g000014
rosa_roxburghii	Rroxscaffold_7G00167850
rosa_rugosa	Rorug06G0295500
rosa_samantha	Rh6AG408200 Rh6BG415500 Rh6CG422900 Rh6DG408500
rosa_wichuraiana	Rw6G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	464
AccBSI	CCGCTC	4 cut(s)	74, 495, 500, 1014
AccI	GTMKAC	2 cut(s)	573, 600
AccII	CGCG	3 cut(s)	297, 402, 567
AcoI	YGGCCR	1 cut(s)	306
AcsI	RAATTY	1 cut(s)	434
AcuI	CTGAAG	1 cut(s)	943
AfaI	GTAC	3 cut(s)	428, 561, 665
AflIII	ACRYGT	1 cut(s)	565
AgsI	TTSAA	1 cut(s)	760
AhdI	GACNNNNNGTC	1 cut(s)	569
AjiI	CACGTC	1 cut(s)	466
AjnI	CCWGG	1 cut(s)	985
AluBI	AGCT	4 cut(s)	531, 616, 838, 865
AluI	AGCT	4 cut(s)	531, 616, 838, 865
Alw21I	GWGCWC	1 cut(s)	867
Alw26I	GTCTC	2 cut(s)	88, 472
AlwNI	CAGNNNCTG	1 cut(s)	86
Ama87I	CYCGRG	2 cut(s)	659, 1040
AoxI	GGCC	7 cut(s)	255, 306, 472, 634, 747, 1044, 1052
ApeKI	GCWGC	2 cut(s)	528, 838
ApoI	RAATTY	1 cut(s)	434
AspLEI	GCGC	2 cut(s)	248, 913
AspS9I	GGNCC	3 cut(s)	208, 635, 708
AsuHPI	GGTGA	3 cut(s)	175, 721, 962
AvaI	CYCGRG	2 cut(s)	659, 1040
AvaII	GGWCC	2 cut(s)	208, 708
BanII	GRGCYC	3 cut(s)	867, 945, 1081
BbsI	GAAGAC	1 cut(s)	349
Bbv12I	GWGCWC	1 cut(s)	867
BbvCI	CCTCAGC	1 cut(s)	12
BbvI	GCAGC	2 cut(s)	540, 825
BccI	CCATC	5 cut(s)	188, 320, 491, 497, 826
BceAI	ACGGC	3 cut(s)	242, 338, 865
BcgI	CGANNNNNNTGC	4 cut(s)	517, 551, 590, 624
BciT130I	CCWGG	1 cut(s)	987
BcoDI	GTCTC	2 cut(s)	88, 472
BfaI	CTAG	1 cut(s)	596
BfmI	CTRYAG	1 cut(s)	839
BfoI	RGCGCY	1 cut(s)	914
BglI	GCCNNNNNGGC	1 cut(s)	254
BglII	AGATCT	1 cut(s)	976
BisI	GCNGC	8 cut(s)	90, 298, 309, 529, 621, 654, 802, 839
BlsI	GCNGC	8 cut(s)	91, 299, 310, 530, 622, 655, 803, 840
BmcAI	AGTACT	1 cut(s)	665
Bme1390I	CCNGG	1 cut(s)	987
Bme18I	GGWCC	2 cut(s)	208, 708
BmeRI	GACNNNNNGTC	1 cut(s)	569
BmeT110I	CYCGRG	2 cut(s)	659, 1040
BmgBI	CACGTC	1 cut(s)	466
BmgT120I	GGNCC	3 cut(s)	208, 635, 708
BmiI	GGNNCC	5 cut(s)	210, 301, 637, 932, 1080
BmrFI	CCNGG	1 cut(s)	987
BmsI	GCATC	2 cut(s)	991, 1057
BpiI	GAAGAC	1 cut(s)	349
BplI	GAGNNNNNCTC	2 cut(s)	854, 886
BpmI	CTGGAG	1 cut(s)	814
Bpu10I	CCTNAGC	1 cut(s)	12
BsaBI	GATNNNNATC	2 cut(s)	854, 981
BsaJI	CCNNGG	4 cut(s)	295, 303, 631, 1028
Bse118I	RCCGGY	2 cut(s)	764, 913
Bse3DI	GCAATG	2 cut(s)	276, 606
Bse8I	GATNNNNATC	2 cut(s)	854, 981
BseBI	CCWGG	1 cut(s)	987
BseDI	CCNNGG	4 cut(s)	295, 303, 631, 1028
BseJI	GATNNNNATC	2 cut(s)	854, 981
BseMI	GCAATG	2 cut(s)	276, 606
BseMII	CTCAG	3 cut(s)	26, 93, 359
BseRI	GAGGAG	9 cut(s)	17, 26, 29, 32, 403, 406, 536, 631, 839
BseXI	GCAGC	2 cut(s)	540, 825
Bsh1236I	CGCG	3 cut(s)	297, 402, 567
Bsh1285I	CGRYCG	2 cut(s)	742, 790
BshFI	GGCC	7 cut(s)	257, 308, 474, 636, 749, 1046, 1054
BsiEI	CGRYCG	2 cut(s)	742, 790
BsiHKAI	GWGCWC	1 cut(s)	867
BsiHKCI	CYCGRG	2 cut(s)	659, 1040
BsiSI	CCGG	4 cut(s)	471, 765, 900, 914
BsiWI	CGTACG	1 cut(s)	559
BsmAI	GTCTC	2 cut(s)	88, 472
BsmBI	CGTCTC	1 cut(s)	472
BsnI	GGCC	7 cut(s)	257, 308, 474, 636, 749, 1046, 1054
BsoBI	CYCGRG	2 cut(s)	659, 1040
Bsp1286I	GDGCHC	3 cut(s)	867, 945, 1081
Bsp143I	GATC	4 cut(s)	240, 819, 976, 1087
Bsp19I	CCATGG	2 cut(s)	303, 1028
BspANI	GGCC	7 cut(s)	257, 308, 474, 636, 749, 1046, 1054
BspCNI	CTCAG	3 cut(s)	25, 92, 358
BspFNI	CGCG	3 cut(s)	297, 402, 567
BspHI	TCATGA	1 cut(s)	1118
BspLI	GGNNCC	5 cut(s)	210, 301, 637, 932, 1080
BspMAI	CTGCAG	1 cut(s)	843
BsrBI	CCGCTC	4 cut(s)	74, 495, 500, 1014
BsrDI	GCAATG	2 cut(s)	276, 606
BsrFI	RCCGGY	2 cut(s)	764, 913
BssAI	RCCGGY	2 cut(s)	764, 913
BssECI	CCNNGG	4 cut(s)	295, 303, 631, 1028
BssMI	GATC	4 cut(s)	240, 819, 976, 1087
BssT1I	CCWWGG	2 cut(s)	303, 1028
Bst2UI	CCWGG	1 cut(s)	987
BstAPI	GCANNNNNTGC	1 cut(s)	750
BstC8I	GCNNGC	4 cut(s)	526, 618, 751, 872
BstDEI	CTNAG	3 cut(s)	12, 79, 345
BstDSI	CCRYGG	3 cut(s)	295, 303, 1028
BstFNI	CGCG	3 cut(s)	297, 402, 567
BstH2I	RGCGCY	1 cut(s)	914
BstHHI	GCGC	2 cut(s)	248, 913
BstKTI	GATC	4 cut(s)	243, 822, 979, 1090
BstMAI	GTCTC	2 cut(s)	88, 472
BstMBI	GATC	4 cut(s)	240, 819, 976, 1087
BstMCI	CGRYCG	2 cut(s)	742, 790
BstNI	CCWGG	1 cut(s)	987
BstSCI	CCNGG	1 cut(s)	985
BstSFI	CTRYAG	1 cut(s)	839
BstUI	CGCG	3 cut(s)	297, 402, 567
BstV1I	GCAGC	2 cut(s)	540, 825
BstV2I	GAAGAC	1 cut(s)	349
BstX2I	RGATCY	1 cut(s)	976
BstYI	RGATCY	1 cut(s)	976
BsuRI	GGCC	7 cut(s)	257, 308, 474, 636, 749, 1046, 1054
BtgI	CCRYGG	3 cut(s)	295, 303, 1028
BtrI	CACGTC	1 cut(s)	466
BtsIMutI	CAGTG	1 cut(s)	999
Cac8I	GCNNGC	4 cut(s)	526, 618, 751, 872
CaiI	CAGNNNCTG	1 cut(s)	86
CciI	TCATGA	1 cut(s)	1118
CfoI	GCGC	2 cut(s)	248, 913
Cfr10I	RCCGGY	2 cut(s)	764, 913
Cfr13I	GGNCC	3 cut(s)	208, 635, 708
Cfr42I	CCGCGG	1 cut(s)	298
CseI	GACGC	2 cut(s)	556, 573
Csp6I	GTAC	3 cut(s)	427, 560, 664
CviAII	CATG	5 cut(s)	235, 263, 304, 1029, 1119
CviQI	GTAC	3 cut(s)	427, 560, 664
DdeI	CTNAG	3 cut(s)	12, 79, 345
DpnI	GATC	4 cut(s)	242, 821, 978, 1089
DpnII	GATC	4 cut(s)	240, 819, 976, 1087
DrdI	GACNNNNNNGTC	1 cut(s)	464
DriI	GACNNNNNGTC	1 cut(s)	569
DseDI	GACNNNNNNGTC	1 cut(s)	464
EaeI	YGGCCR	1 cut(s)	306
Eam1105I	GACNNNNNGTC	1 cut(s)	569
EciI	GGCGGA	1 cut(s)	364
Ecl136II	GAGCTC	1 cut(s)	865
Eco130I	CCWWGG	2 cut(s)	303, 1028
Eco147I	AGGCCT	2 cut(s)	749, 1054
Eco24I	GRGCYC	3 cut(s)	867, 945, 1081
Eco47I	GGWCC	2 cut(s)	208, 708
Eco53kI	GAGCTC	1 cut(s)	865
Eco57I	CTGAAG	1 cut(s)	943
Eco88I	CYCGRG	2 cut(s)	659, 1040
EcoICRI	GAGCTC	1 cut(s)	865
EcoRII	CCWGG	1 cut(s)	985
EcoT14I	CCWWGG	2 cut(s)	303, 1028
EcoT38I	GRGCYC	3 cut(s)	867, 945, 1081
ErhI	CCWWGG	2 cut(s)	303, 1028
Esp3I	CGTCTC	1 cut(s)	472
FaeI	CATG	5 cut(s)	238, 266, 307, 1032, 1122
FaiI	YATR	9 cut(s)	236, 264, 305, 773, 908, 924, 1030, 1086, 1120
FatI	CATG	5 cut(s)	234, 262, 303, 1028, 1118
FauI	CCCGC	3 cut(s)	79, 533, 1007
FblI	GTMKAC	2 cut(s)	573, 600
Fnu4HI	GCNGC	8 cut(s)	90, 298, 309, 529, 621, 654, 802, 839
FriOI	GRGCYC	3 cut(s)	867, 945, 1081
Fsp4HI	GCNGC	8 cut(s)	90, 298, 309, 529, 621, 654, 802, 839
FspBI	CTAG	1 cut(s)	596
GlaI	GCGC	2 cut(s)	247, 912
GluI	GCNGC	8 cut(s)	90, 298, 309, 529, 621, 654, 802, 839
GsuI	CTGGAG	1 cut(s)	814
HaeII	RGCGCY	1 cut(s)	914
HaeIII	GGCC	7 cut(s)	257, 308, 474, 636, 749, 1046, 1054
HapII	CCGG	4 cut(s)	471, 765, 900, 914
HgaI	GACGC	2 cut(s)	556, 573
HhaI	GCGC	2 cut(s)	248, 913
Hin1II	CATG	5 cut(s)	238, 266, 307, 1032, 1122
Hin6I	GCGC	2 cut(s)	246, 911
HinP1I	GCGC	2 cut(s)	246, 911
HincII	GTYRAC	1 cut(s)	601
HindII	GTYRAC	1 cut(s)	601
HinfI	GANTC	6 cut(s)	218, 441, 458, 581, 855, 1115
HpaII	CCGG	4 cut(s)	471, 765, 900, 914
HphI	GGTGA	3 cut(s)	175, 721, 962
Hpy166II	GTNNAC	2 cut(s)	574, 601
Hpy188I	TCNGA	6 cut(s)	223, 348, 440, 586, 947, 962
Hpy188III	TCNNGA	3 cut(s)	503, 1064, 1119
Hpy8I	GTNNAC	2 cut(s)	574, 601
Hpy99I	CGWCG	6 cut(s)	203, 218, 458, 567, 572, 605
HpyAV	CCTTC	8 cut(s)	61, 71, 186, 430, 460, 712, 742, 1012
HpyCH4IV	ACGT	1 cut(s)	465
HpyCH4V	TGCA	5 cut(s)	669, 841, 972, 982, 1006
HpyF3I	CTNAG	3 cut(s)	12, 79, 345
HpySE526I	ACGT	1 cut(s)	465
Hsp92II	CATG	5 cut(s)	238, 266, 307, 1032, 1122
HspAI	GCGC	2 cut(s)	246, 911
KspI	CCGCGG	1 cut(s)	298
Kzo9I	GATC	4 cut(s)	240, 819, 976, 1087
LmnI	GCTCC	7 cut(s)	79, 305, 500, 835, 919, 1011, 1084
Lsp1109I	GCAGC	2 cut(s)	540, 825
LweI	GCATC	2 cut(s)	991, 1057
MaeI	CTAG	1 cut(s)	596
MaeII	ACGT	1 cut(s)	465
MaeIII	GTNAC	2 cut(s)	950, 1096
MalI	GATC	4 cut(s)	242, 821, 978, 1089
MbiI	CCGCTC	4 cut(s)	74, 495, 500, 1014
MboI	GATC	4 cut(s)	240, 819, 976, 1087
MboII	GAAGA	2 cut(s)	349, 829
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	3 cut(s)	867, 945, 1081
MluCI	AATT	3 cut(s)	134, 152, 434
MluI	ACGCGT	1 cut(s)	565
MlyI	GAGTC	2 cut(s)	452, 575
MmeI	TCCRAC	4 cut(s)	352, 408, 609, 735
MspA1I	CMGCKG	2 cut(s)	297, 792
MspI	CCGG	4 cut(s)	471, 765, 900, 914
MspR9I	CCNGG	1 cut(s)	987
MvaI	CCWGG	1 cut(s)	987
MvnI	CGCG	3 cut(s)	297, 402, 567
NcoI	CCATGG	2 cut(s)	303, 1028
NdeII	GATC	4 cut(s)	240, 819, 976, 1087
NlaIII	CATG	5 cut(s)	238, 266, 307, 1032, 1122
NlaIV	GGNNCC	5 cut(s)	210, 301, 637, 932, 1080
NmeAIII	GCCGAG	2 cut(s)	612, 846
NmuCI	GTSAC	1 cut(s)	950
PaeR7I	CTCGAG	1 cut(s)	1040
PagI	TCATGA	1 cut(s)	1118
PceI	AGGCCT	2 cut(s)	749, 1054
PcsI	WCGNNNNNNNCGW	5 cut(s)	222, 462, 576, 657, 878
PfeI	GAWTC	4 cut(s)	218, 441, 855, 1115
Pfl23II	CGTACG	1 cut(s)	559
PkrI	GCNGC	8 cut(s)	91, 299, 310, 530, 622, 655, 803, 840
PleI	GAGTC	2 cut(s)	452, 575
PpsI	GAGTC	2 cut(s)	452, 575
Psp124BI	GAGCTC	1 cut(s)	867
Psp6I	CCWGG	1 cut(s)	985
PspGI	CCWGG	1 cut(s)	985
PspLI	CGTACG	1 cut(s)	559
PspN4I	GGNNCC	5 cut(s)	210, 301, 637, 932, 1080
PspPI	GGNCC	3 cut(s)	208, 635, 708
PspXI	VCTCGAGB	1 cut(s)	1040
PstI	CTGCAG	1 cut(s)	843
PstNI	CAGNNNCTG	1 cut(s)	86
PsuI	RGATCY	1 cut(s)	976
RsaI	GTAC	3 cut(s)	428, 561, 665
RsaNI	GTAC	3 cut(s)	427, 560, 664
SacI	GAGCTC	1 cut(s)	867
SacII	CCGCGG	1 cut(s)	298
SalI	GTCGAC	1 cut(s)	599
SatI	GCNGC	8 cut(s)	90, 298, 309, 529, 621, 654, 802, 839
Sau3AI	GATC	4 cut(s)	240, 819, 976, 1087
Sau96I	GGNCC	3 cut(s)	208, 635, 708
ScaI	AGTACT	1 cut(s)	665
SchI	GAGTC	2 cut(s)	452, 575
ScrFI	CCNGG	1 cut(s)	987
SduI	GDGCHC	3 cut(s)	867, 945, 1081
SfaNI	GCATC	2 cut(s)	991, 1057
SfcI	CTRYAG	1 cut(s)	839
Sfr274I	CTCGAG	1 cut(s)	1040
Sfr303I	CCGCGG	1 cut(s)	298
SgrAI	CRCCGGYG	2 cut(s)	764, 913
SgrBI	CCGCGG	1 cut(s)	298
SinI	GGWCC	2 cut(s)	208, 708
SlaI	CTCGAG	1 cut(s)	1040
SmlI	CTYRAG	1 cut(s)	1040
SmoI	CTYRAG	1 cut(s)	1040
Sse9I	AATT	3 cut(s)	134, 152, 434
SseBI	AGGCCT	2 cut(s)	749, 1054
SspMI	CTAG	1 cut(s)	596
SstI	GAGCTC	1 cut(s)	867
StuI	AGGCCT	2 cut(s)	749, 1054
StyD4I	CCNGG	1 cut(s)	985
StyI	CCWWGG	2 cut(s)	303, 1028
TaiI	ACGT	1 cut(s)	468
TaqI	TCGA	9 cut(s)	279, 453, 504, 579, 600, 780, 786, 822, 1041
TasI	AATT	3 cut(s)	134, 152, 434
TatI	WGTACW	1 cut(s)	663
TauI	GCSGC	6 cut(s)	92, 300, 311, 623, 656, 804
TfiI	GAWTC	4 cut(s)	218, 441, 855, 1115
TscAI	CASTG	1 cut(s)	999
TseFI	GTSAC	1 cut(s)	950
TseI	GCWGC	2 cut(s)	528, 838
Tsp45I	GTSAC	1 cut(s)	950
TspDTI	ATGAA	2 cut(s)	324, 1107
TspGWI	ACGGA	2 cut(s)	310, 634
TspRI	CASTG	1 cut(s)	999
VpaK11BI	GGWCC	2 cut(s)	208, 708
XapI	RAATTY	1 cut(s)	434
XhoI	CTCGAG	1 cut(s)	1040
XmiI	GTMKAC	2 cut(s)	573, 600
XspI	CTAG	1 cut(s)	596
ZrmI	AGTACT	1 cut(s)	665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.