Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0013972

Physical Location & Seq

Genomic Coordinates Forward (+)

2713326 .. 2714401

Gene Structure 1076 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1036800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1005 bp

ATGCCCATGCCACCTCCACTCCTCCTTCTCCTCCTCCTACTTCTCTTCCTCTCCCCGGCCACCGCAACCAATGCCGCCGCCACCACCCAACAGTTTAGAGAAGCACCTCAGTTCTATAATTCCCAAGACTGCCCTTCCATCACCACGCTCCCTGACGTTGACGTGGACCCTGACGAATCAGACGACGGCCACATGATTTGCTCTCCTCAAGCAGTCCACGTGGCAATGACTCTCGACACCGCCTACATCCGCGGCTCCATGGCCGCGATCCTCTCCGTCCTCCAACACTCATCCTGTCCCCAAAACGCAGTCTTCCACTTCGTCGCCTCCGCCGCCGCCAACGCTTCACTCCTCCGCCAAACAATCTCCACCTCATTTCCCTACCTGAAATTCCGAATCTACGCCTTCGACGACTCCCACGTCTCCGGCCTCATCTCCACCTCCATCCGCTCCGCCCTCGACTGCCCCCTCAACTACGCCGATCCTACCTCGCCGACCTTCTCCCCCTCTGCGTCCGCCGCCGTTGCCGTCCTCGCCGCCCCGGAGTACTGCAACGCCAACTTCACCTCCTACTTCACCTCCGCCTTCTGGTCGAACCCCTCCCTCTCCCTCACCTTTGCCGACCGCCACGCCTGCTACTTCAACACCGGTGTCATGGTCATCGACCTCGACCGGTGGCGCGGCGACGACTACACGGCAAAGATCGAGGAGTGGATGGAGCTCCAGAAGAGAATGCGGATCTATGAGCTCGGATCCCTCCCGCCGTTTCTTTTGGTGTTCGCAGGGAAAATCGCGCCAGTGGAGCACCGGTGGAACCAGCACGGGCTCGGCGGCGATAACTTCAGGGGGCTTTGTCGGGATCTGCATCCGGGCGCAGTGAGTCTTTTGCATTGGAGCGGGAAGGGGAAGCCGTGGGCCCGGCTGGAGGCCAATCGGCCGTGCCCGCTCGATGCTCTCTGGGCTCCTTACGATCTCTTGGAAACGCCTTTTGTTTTGGACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000271 GO:0003002 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005975 GO:0005976 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009987 GO:0010051 GO:0010383 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0032501 GO:0032502 GO:0032504 GO:0033692 GO:0034637 GO:0034645 GO:0042545 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0045491 GO:0045492 GO:0047262 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0052386 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071704 GO:0071840 GO:0099402 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_8

Protein Analysis

335

Amino Acids

36.81

Weight (kDa)

5.26

Isoelectric Point (pI)

45.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_8	PF01501	180 - 307	1.3e-28	Glycosyl transferase family 8

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19300
fragaria_vesca	FvH4_2g40370
malus_domestica	MD08G1036800.v1.1
prunus_persica	Prupe.1G384100_v2.0.a1
pyrus_communis	pycom08g02940 pycom15g02880
rosa_chinensis	RchiOBHm_Chr6g0300381
rosa_laevigata	RLG00000011343
rosa_multiflora	Rmu_co8373719.1_g000001 Rmu_sc0001670.1_g000014
rosa_roxburghii	Rroxscaffold_7G00167850
rosa_rugosa	Rorug06G0295500
rosa_samantha	Rh6AG408200 Rh6BG415500 Rh6CG422900 Rh6DG408500
rosa_wichuraiana	Rw6G035700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	419
AccBSI	CCGCTC	3 cut(s)	450, 897, 946
AccII	CGCG	4 cut(s)	252, 266, 681, 794
AclWI	GGATC	6 cut(s)	262, 476, 746, 747, 760, 867
AcoI	YGGCCR	4 cut(s)	57, 187, 261, 935
AcsI	RAATTY	1 cut(s)	389
AcuI	CTGAAG	1 cut(s)	826
AcvI	CACGTG	1 cut(s)	220
AfaI	GTAC	1 cut(s)	548
AfiI	CCNNNNNNNGG	3 cut(s)	55, 588, 925
AgeI	ACCGGT	3 cut(s)	647, 672, 807
AgsI	TTSAA	1 cut(s)	643
AjiI	CACGTC	2 cut(s)	163, 421
AluBI	AGCT	2 cut(s)	721, 748
AluI	AGCT	2 cut(s)	721, 748
Alw21I	GWGCWC	3 cut(s)	723, 750, 807
Alw26I	GTCTC	1 cut(s)	427
AlwI	GGATC	6 cut(s)	262, 476, 746, 747, 760, 867
AoxI	GGCC	7 cut(s)	57, 187, 261, 427, 915, 927, 935
ApaI	GGGCCC	1 cut(s)	919
ApoI	RAATTY	1 cut(s)	389
AsiGI	ACCGGT	3 cut(s)	647, 672, 807
AspLEI	GCGC	3 cut(s)	681, 796, 875
AspS9I	GGNCC	3 cut(s)	166, 915, 916
AsuC2I	CCSGG	4 cut(s)	56, 542, 870, 919
AsuHPI	GGTGA	4 cut(s)	133, 556, 568, 604
AvaII	GGWCC	1 cut(s)	166
BaeGI	GKGCMC	2 cut(s)	919, 944
BamHI	GGATCC	1 cut(s)	752
BanII	GRGCYC	5 cut(s)	723, 750, 828, 919, 964
BbrPI	CACGTG	1 cut(s)	220
BbsI	GAAGAC	1 cut(s)	304
Bbv12I	GWGCWC	3 cut(s)	723, 750, 807
BccI	CCATC	3 cut(s)	146, 452, 709
BceAI	ACGGC	7 cut(s)	202, 506, 512, 711, 748, 895, 922
BcnI	CCSGG	4 cut(s)	56, 542, 870, 919
BcoDI	GTCTC	1 cut(s)	427
BmcAI	AGTACT	1 cut(s)	548
Bme1390I	CCNGG	4 cut(s)	56, 542, 870, 919
Bme18I	GGWCC	1 cut(s)	166
BmgBI	CACGTC	2 cut(s)	163, 421
BmgT120I	GGNCC	3 cut(s)	166, 915, 916
BmiI	GGNNCC	6 cut(s)	168, 256, 754, 815, 917, 963
BmrFI	CCNGG	4 cut(s)	56, 542, 870, 919
BmsI	GCATC	2 cut(s)	874, 940
BpiI	GAAGAC	1 cut(s)	304
BpmI	CTGGAG	2 cut(s)	707, 944
BpuEI	CTTGAG	1 cut(s)	192
BpuMI	CCSGG	4 cut(s)	56, 542, 870, 919
BsaAI	YACGTR	1 cut(s)	220
BsaBI	GATNNNNATC	1 cut(s)	864
BsaJI	CCNNGG	5 cut(s)	54, 250, 258, 540, 911
BsaWI	WCCGGW	3 cut(s)	647, 672, 807
BsaXI	ACNNNNNCTCC	7 cut(s)	33, 551, 563, 581, 593, 794, 824
Bsc4I	CCNNNNNNNGG	3 cut(s)	55, 588, 925
Bse118I	RCCGGY	3 cut(s)	647, 672, 807
Bse1I	ACTGG	1 cut(s)	797
Bse3DI	GCAATG	1 cut(s)	231
Bse8I	GATNNNNATC	1 cut(s)	864
BseDI	CCNNGG	5 cut(s)	54, 250, 258, 540, 911
BseGI	GGATG	5 cut(s)	246, 290, 444, 720, 865
BseJI	GATNNNNATC	1 cut(s)	864
BseLI	CCNNNNNNNGG	3 cut(s)	55, 588, 925
BseMI	GCAATG	1 cut(s)	231
BseMII	CTCAG	1 cut(s)	122
BseNI	ACTGG	1 cut(s)	797
BseRI	GAGGAG	6 cut(s)	11, 20, 23, 195, 341, 722
BseSI	GKGCMC	2 cut(s)	919, 944
BseX3I	CGGCCG	1 cut(s)	935
Bsh1236I	CGCG	4 cut(s)	252, 266, 681, 794
Bsh1285I	CGRYCG	3 cut(s)	625, 673, 938
BshFI	GGCC	7 cut(s)	59, 189, 263, 429, 917, 929, 937
BshTI	ACCGGT	3 cut(s)	647, 672, 807
BsiEI	CGRYCG	3 cut(s)	625, 673, 938
BsiHKAI	GWGCWC	3 cut(s)	723, 750, 807
BsiSI	CCGG	8 cut(s)	56, 426, 542, 648, 673, 808, 869, 919
BslFI	GGGAC	1 cut(s)	282
BslI	CCNNNNNNNGG	3 cut(s)	55, 588, 925
BsmAI	GTCTC	1 cut(s)	427
BsmBI	CGTCTC	1 cut(s)	427
BsmFI	GGGAC	1 cut(s)	282
BsmI	GAATGC	1 cut(s)	738
BsnI	GGCC	7 cut(s)	59, 189, 263, 429, 917, 929, 937
Bsp120I	GGGCCC	1 cut(s)	915
Bsp1286I	GDGCHC	7 cut(s)	723, 750, 807, 828, 919, 944, 964
Bsp143I	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
Bsp19I	CCATGG	1 cut(s)	258
BspANI	GGCC	7 cut(s)	59, 189, 263, 429, 917, 929, 937
BspCNI	CTCAG	1 cut(s)	121
BspFNI	CGCG	4 cut(s)	252, 266, 681, 794
BspLI	GGNNCC	6 cut(s)	168, 256, 754, 815, 917, 963
BspPI	GGATC	6 cut(s)	262, 476, 746, 747, 760, 867
BsrBI	CCGCTC	3 cut(s)	450, 897, 946
BsrDI	GCAATG	1 cut(s)	231
BsrFI	RCCGGY	3 cut(s)	647, 672, 807
BsrI	ACTGG	1 cut(s)	797
BssAI	RCCGGY	3 cut(s)	647, 672, 807
BssECI	CCNNGG	5 cut(s)	54, 250, 258, 540, 911
BssMI	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
BssT1I	CCWWGG	1 cut(s)	258
Bst4CI	ACNGT	1 cut(s)	93
Bst6I	CTCTTC	2 cut(s)	50, 722
BstAPI	GCANNNNNTGC	1 cut(s)	71
BstBAI	YACGTR	1 cut(s)	220
BstC8I	GCNNGC	2 cut(s)	634, 944
BstDEI	CTNAG	1 cut(s)	108
BstDSI	CCRYGG	3 cut(s)	250, 258, 911
BstF5I	GGATG	5 cut(s)	246, 290, 444, 720, 865
BstFNI	CGCG	4 cut(s)	252, 266, 681, 794
BstHHI	GCGC	3 cut(s)	681, 796, 875
BstKTI	GATC	7 cut(s)	270, 484, 705, 741, 755, 862, 973
BstMAI	GTCTC	1 cut(s)	427
BstMBI	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
BstMCI	CGRYCG	3 cut(s)	625, 673, 938
BstSCI	CCNGG	4 cut(s)	54, 540, 868, 917
BstSLI	GKGCMC	2 cut(s)	919, 944
BstUI	CGCG	4 cut(s)	252, 266, 681, 794
BstV2I	GAAGAC	1 cut(s)	304
BstX2I	RGATCY	3 cut(s)	738, 752, 859
BstYI	RGATCY	3 cut(s)	738, 752, 859
BstZI	CGGCCG	1 cut(s)	935
BsuRI	GGCC	7 cut(s)	59, 189, 263, 429, 917, 929, 937
BtgI	CCRYGG	3 cut(s)	250, 258, 911
BtrI	CACGTC	2 cut(s)	163, 421
BtsCI	GGATG	5 cut(s)	246, 290, 444, 720, 865
BtsI	GCAGTG	1 cut(s)	882
BtsIMutI	CAGTG	2 cut(s)	804, 882
Cac8I	GCNNGC	2 cut(s)	634, 944
CfoI	GCGC	3 cut(s)	681, 796, 875
Cfr10I	RCCGGY	3 cut(s)	647, 672, 807
Cfr13I	GGNCC	3 cut(s)	166, 915, 916
Cfr42I	CCGCGG	1 cut(s)	253
CseI	GACGC	1 cut(s)	501
Csp6I	GTAC	1 cut(s)	547
CspAI	ACCGGT	3 cut(s)	647, 672, 807
CspCI	CAANNNNNGTGG	2 cut(s)	179, 214
CviAII	CATG	4 cut(s)	7, 193, 259, 655
CviQI	GTAC	1 cut(s)	547
DdeI	CTNAG	1 cut(s)	108
DpnI	GATC	7 cut(s)	269, 483, 704, 740, 754, 861, 972
DpnII	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
DrdI	GACNNNNNNGTC	1 cut(s)	419
DseDI	GACNNNNNNGTC	1 cut(s)	419
EaeI	YGGCCR	4 cut(s)	57, 187, 261, 935
EagI	CGGCCG	1 cut(s)	935
Eam1104I	CTCTTC	2 cut(s)	50, 722
EarI	CTCTTC	2 cut(s)	50, 722
EciI	GGCGGA	5 cut(s)	319, 344, 442, 505, 571
Ecl136II	GAGCTC	2 cut(s)	721, 748
EclXI	CGGCCG	1 cut(s)	935
Eco130I	CCWWGG	1 cut(s)	258
Eco24I	GRGCYC	5 cut(s)	723, 750, 828, 919, 964
Eco47I	GGWCC	1 cut(s)	166
Eco52I	CGGCCG	1 cut(s)	935
Eco53kI	GAGCTC	2 cut(s)	721, 748
Eco57I	CTGAAG	1 cut(s)	826
Eco72I	CACGTG	1 cut(s)	220
EcoICRI	GAGCTC	2 cut(s)	721, 748
EcoT14I	CCWWGG	1 cut(s)	258
EcoT38I	GRGCYC	5 cut(s)	723, 750, 828, 919, 964
ErhI	CCWWGG	1 cut(s)	258
Esp3I	CGTCTC	1 cut(s)	427
FaeI	CATG	4 cut(s)	10, 196, 262, 658
FaiI	YATR	6 cut(s)	8, 117, 194, 260, 656, 744
FaqI	GGGAC	1 cut(s)	282
FatI	CATG	4 cut(s)	6, 192, 258, 654
FauI	CCCGC	3 cut(s)	768, 890, 951
FokI	GGATG	5 cut(s)	233, 277, 431, 727, 852
FriOI	GRGCYC	5 cut(s)	723, 750, 828, 919, 964
GlaI	GCGC	3 cut(s)	680, 795, 874
GsuI	CTGGAG	2 cut(s)	707, 944
HaeIII	GGCC	7 cut(s)	59, 189, 263, 429, 917, 929, 937
HapII	CCGG	8 cut(s)	56, 426, 542, 648, 673, 808, 869, 919
HgaI	GACGC	1 cut(s)	501
HhaI	GCGC	3 cut(s)	681, 796, 875
Hin1II	CATG	4 cut(s)	10, 196, 262, 658
Hin6I	GCGC	3 cut(s)	679, 794, 873
HinP1I	GCGC	3 cut(s)	679, 794, 873
HincII	GTYRAC	1 cut(s)	160
HindII	GTYRAC	1 cut(s)	160
HinfI	GANTC	6 cut(s)	176, 229, 396, 413, 880, 998
HpaII	CCGG	8 cut(s)	56, 426, 542, 648, 673, 808, 869, 919
HphI	GGTGA	4 cut(s)	133, 556, 568, 604
Hpy166II	GTNNAC	3 cut(s)	160, 166, 217
Hpy188I	TCNGA	3 cut(s)	181, 395, 752
Hpy188III	TCNNGA	4 cut(s)	233, 724, 857, 1002
Hpy8I	GTNNAC	3 cut(s)	160, 166, 217
Hpy99I	CGWCG	4 cut(s)	188, 326, 413, 689
HpyAV	CCTTC	6 cut(s)	35, 144, 415, 508, 595, 895
HpyCH4III	ACNGT	1 cut(s)	93
HpyCH4IV	ACGT	4 cut(s)	156, 162, 219, 420
HpyCH4V	TGCA	3 cut(s)	552, 865, 889
HpyF3I	CTNAG	1 cut(s)	108
HpySE526I	ACGT	4 cut(s)	156, 162, 219, 420
Hsp92II	CATG	4 cut(s)	10, 196, 262, 658
HspAI	GCGC	3 cut(s)	679, 794, 873
KspI	CCGCGG	1 cut(s)	253
Kzo9I	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
LmnI	GCTCC	8 cut(s)	153, 260, 455, 718, 726, 802, 894, 967
LweI	GCATC	2 cut(s)	874, 940
MaeII	ACGT	4 cut(s)	156, 162, 219, 420
MalI	GATC	7 cut(s)	269, 483, 704, 740, 754, 861, 972
MbiI	CCGCTC	3 cut(s)	450, 897, 946
MboI	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
MboII	GAAGA	3 cut(s)	37, 304, 739
MflI	RGATCY	3 cut(s)	738, 752, 859
MhlI	GDGCHC	7 cut(s)	723, 750, 807, 828, 919, 944, 964
MluCI	AATT	2 cut(s)	118, 389
MlyI	GAGTC	4 cut(s)	223, 407, 889, 992
MmeI	TCCRAC	1 cut(s)	307
MspA1I	CMGCKG	1 cut(s)	252
MspI	CCGG	8 cut(s)	56, 426, 542, 648, 673, 808, 869, 919
MspR9I	CCNGG	4 cut(s)	56, 542, 870, 919
Mva1269I	GAATGC	1 cut(s)	738
MvnI	CGCG	4 cut(s)	252, 266, 681, 794
NciI	CCSGG	4 cut(s)	56, 542, 870, 919
NcoI	CCATGG	1 cut(s)	258
NdeII	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
NlaIII	CATG	4 cut(s)	10, 196, 262, 658
NlaIV	GGNNCC	6 cut(s)	168, 256, 754, 815, 917, 963
NmeAIII	GCCGAG	1 cut(s)	807
PcsI	WCGNNNNNNNCGW	3 cut(s)	180, 408, 417
PctI	GAATGC	1 cut(s)	738
PfeI	GAWTC	2 cut(s)	176, 396
PinAI	ACCGGT	3 cut(s)	647, 672, 807
PleI	GAGTC	4 cut(s)	223, 407, 888, 992
PmaCI	CACGTG	1 cut(s)	220
PmlI	CACGTG	1 cut(s)	220
PpsI	GAGTC	4 cut(s)	223, 407, 888, 992
Ppu21I	YACGTR	1 cut(s)	220
Psp124BI	GAGCTC	2 cut(s)	723, 750
PspCI	CACGTG	1 cut(s)	220
PspN4I	GGNNCC	6 cut(s)	168, 256, 754, 815, 917, 963
PspOMI	GGGCCC	1 cut(s)	915
PspPI	GGNCC	3 cut(s)	166, 915, 916
PsuI	RGATCY	3 cut(s)	738, 752, 859
RsaI	GTAC	1 cut(s)	548
RsaNI	GTAC	1 cut(s)	547
SacI	GAGCTC	2 cut(s)	723, 750
SacII	CCGCGG	1 cut(s)	253
Sau3AI	GATC	7 cut(s)	267, 481, 702, 738, 752, 859, 970
Sau96I	GGNCC	3 cut(s)	166, 915, 916
ScaI	AGTACT	1 cut(s)	548
SchI	GAGTC	4 cut(s)	223, 407, 889, 992
ScrFI	CCNGG	4 cut(s)	56, 542, 870, 919
SduI	GDGCHC	7 cut(s)	723, 750, 807, 828, 919, 944, 964
SfaNI	GCATC	2 cut(s)	874, 940
Sfr303I	CCGCGG	1 cut(s)	253
SgrAI	CRCCGGYG	2 cut(s)	647, 807
SgrBI	CCGCGG	1 cut(s)	253
SinI	GGWCC	1 cut(s)	166
SmlI	CTYRAG	1 cut(s)	207
SmoI	CTYRAG	1 cut(s)	207
Sse9I	AATT	2 cut(s)	118, 389
SstI	GAGCTC	2 cut(s)	723, 750
StyD4I	CCNGG	4 cut(s)	54, 540, 868, 917
StyI	CCWWGG	1 cut(s)	258
TaaI	ACNGT	1 cut(s)	93
TaiI	ACGT	4 cut(s)	159, 165, 222, 423
TaqI	TCGA	8 cut(s)	234, 408, 459, 593, 663, 669, 705, 948
TasI	AATT	2 cut(s)	118, 389
TatI	WGTACW	1 cut(s)	546
TfiI	GAWTC	2 cut(s)	176, 396
TscAI	CASTG	2 cut(s)	804, 882
TspGWI	ACGGA	1 cut(s)	265
TspRI	CASTG	2 cut(s)	804, 882
VpaK11BI	GGWCC	1 cut(s)	166
XapI	RAATTY	1 cut(s)	389
ZrmI	AGTACT	1 cut(s)	548

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.