Calcium-binding EF hand family protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21630 AT1G21630 AT1G21630 AT1G21630 |
| fragaria_vesca | FvH4_2g16750 FvH4_2g16750 FvH4_2g16750 |
| malus_domestica | MD04G1035400.v1.1 MD05G1135500.v1.1 MD05G1137000.v1.1 MD10G1140800.v1.1 |
| prunus_persica | Prupe.8G179600_v2.0.a1 Prupe.8G179600_v2.0.a1 Prupe.8G179600_v2.0.a1 |
| pyrus_communis | pycom03g08400 pycom05g13210 pycom05g13310 pycom10g11940 pycom10g11970 |
| rosa_chinensis | RchiOBHm_Chr6g0280871 |
| rosa_laevigata | RLG00000013024 |
| rosa_multiflora | Rmu_co8142976.1_g000001 Rmu_co8285335.1_g000001 Rmu_sc0004772.1_g000002 Rmu_sc0026236.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00187540 |
| rosa_rugosa | Rorug06G0135900 |
| rosa_samantha | Rh6AG248700 Rh6BG250400 Rh6BG250600 Rh6CG251400 Rh6DG243100 |
| rosa_wichuraiana | Rw6G021500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 204 |
| AarI | CACCTGC | 1 cut(s) | 724 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 3071 |
| Acc16I | TGCGCA | 1 cut(s) | 3368 |
| Acc36I | ACCTGC | 2 cut(s) | 724, 1381 |
| AccB1I | GGYRCC | 2 cut(s) | 832, 1561 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1619, 1640 |
| AccBSI | CCGCTC | 1 cut(s) | 194 |
| AccI | GTMKAC | 1 cut(s) | 238 |
| AccII | CGCG | 1 cut(s) | 992 |
| AclWI | GGATC | 7 cut(s) | 39, 124, 836, 849, 1758, 2560, 2751 |
| AcoI | YGGCCR | 3 cut(s) | 187, 1250, 2632 |
| AcsI | RAATTY | 7 cut(s) | 121, 628, 636, 1161, 1348, 2102, 2185 |
| AcuI | CTGAAG | 2 cut(s) | 273, 2779 |
| AcyI | GRCGYC | 1 cut(s) | 3485 |
| AfaI | GTAC | 5 cut(s) | 655, 1928, 2087, 2217, 3262 |
| AfeI | AGCGCT | 1 cut(s) | 2198 |
| AflII | CTTAAG | 2 cut(s) | 1357, 1627 |
| AflIII | ACRYGT | 1 cut(s) | 133 |
| AgeI | ACCGGT | 1 cut(s) | 1923 |
| AhlI | ACTAGT | 1 cut(s) | 443 |
| AjiI | CACGTC | 1 cut(s) | 3165 |
| AleI | CACNNNNGTG | 1 cut(s) | 426 |
| Alw21I | GWGCWC | 5 cut(s) | 768, 2951, 3017, 3083, 3149 |
| Alw26I | GTCTC | 7 cut(s) | 1371, 1683, 2422, 2690, 3191, 3476, 3614 |
| Alw44I | GTGCAC | 1 cut(s) | 764 |
| AlwI | GGATC | 7 cut(s) | 39, 124, 836, 849, 1758, 2560, 2751 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 34, 761, 2456 |
| Ama87I | CYCGRG | 4 cut(s) | 526, 3010, 3076, 3142 |
| Aor51HI | AGCGCT | 1 cut(s) | 2198 |
| ApaI | GGGCCC | 1 cut(s) | 998 |
| ApaLI | GTGCAC | 1 cut(s) | 764 |
| ApeKI | GCWGC | 9 cut(s) | 5, 269, 323, 857, 922, 2199, 2260, 2282, 3369 |
| ApoI | RAATTY | 7 cut(s) | 121, 628, 636, 1161, 1348, 2102, 2185 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 875, 907, 2750, 2782 |
| AsiGI | ACCGGT | 1 cut(s) | 1923 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1352, 3056, 3650 |
| AspLEI | GCGC | 5 cut(s) | 10, 760, 2145, 2199, 3369 |
| AsuC2I | CCSGG | 3 cut(s) | 527, 528, 1222 |
| AsuHPI | GGTGA | 6 cut(s) | 1531, 1967, 2444, 2501, 2592, 2657 |
| AvaI | CYCGRG | 4 cut(s) | 526, 3010, 3076, 3142 |
| AvaII | GGWCC | 7 cut(s) | 153, 611, 1133, 1643, 1696, 3007, 3590 |
| AxyI | CCTNAGG | 1 cut(s) | 1117 |
| BaeGI | GKGCMC | 3 cut(s) | 768, 837, 998 |
| BalI | TGGCCA | 2 cut(s) | 1252, 2634 |
| BamHI | GGATCC | 1 cut(s) | 841 |
| BanI | GGYRCC | 2 cut(s) | 832, 1561 |
| BanII | GRGCYC | 2 cut(s) | 998, 2027 |
| BauI | CACGAG | 1 cut(s) | 801 |
| Bbv12I | GWGCWC | 5 cut(s) | 768, 2951, 3017, 3083, 3149 |
| BbvCI | CCTCAGC | 1 cut(s) | 93 |
| BbvI | GCAGC | 9 cut(s) | 17, 256, 310, 844, 934, 2186, 2269, 2272, 3381 |
| BccI | CCATC | 8 cut(s) | 62, 68, 400, 505, 589, 826, 1682, 2636 |
| BceAI | ACGGC | 1 cut(s) | 2746 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1651, 1685, 2516, 2550 |
| BciVI | GTATCC | 1 cut(s) | 483 |
| BclI | TGATCA | 1 cut(s) | 1408 |
| BcnI | CCSGG | 3 cut(s) | 527, 528, 1222 |
| BcoDI | GTCTC | 7 cut(s) | 1371, 1683, 2422, 2690, 3191, 3476, 3614 |
| BcuI | ACTAGT | 1 cut(s) | 443 |
| BfaI | CTAG | 6 cut(s) | 444, 1683, 1979, 2312, 3462, 3655 |
| BfmI | CTRYAG | 4 cut(s) | 717, 1014, 3585, 3612 |
| BfoI | RGCGCY | 3 cut(s) | 11, 761, 2200 |
| BfrI | CTTAAG | 2 cut(s) | 1357, 1627 |
| BfuAI | ACCTGC | 2 cut(s) | 724, 1381 |
| BfuI | GTATCC | 1 cut(s) | 483 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1663 |
| BlpI | GCTNAGC | 1 cut(s) | 593 |
| Bme18I | GGWCC | 7 cut(s) | 153, 611, 1133, 1643, 1696, 3007, 3590 |
| BmeT110I | CYCGRG | 4 cut(s) | 526, 3010, 3076, 3142 |
| BmgBI | CACGTC | 1 cut(s) | 3165 |
| BmrI | ACTGGG | 2 cut(s) | 495, 1493 |
| BmuI | ACTGGG | 2 cut(s) | 495, 1493 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 403, 435 |
| BpmI | CTGGAG | 4 cut(s) | 42, 561, 1248, 2937 |
| Bpu10I | CCTNAGC | 3 cut(s) | 93, 144, 372 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 593 |
| BpuEI | CTTGAG | 2 cut(s) | 1578, 2189 |
| BpuMI | CCSGG | 3 cut(s) | 527, 528, 1222 |
| BsaAI | YACGTR | 2 cut(s) | 45, 2219 |
| BsaHI | GRCGYC | 1 cut(s) | 3485 |
| BsaWI | WCCGGW | 1 cut(s) | 1923 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 319, 349, 3284, 3314 |
| Bse118I | RCCGGY | 3 cut(s) | 176, 1923, 2887 |
| Bse21I | CCTNAGG | 1 cut(s) | 1117 |
| Bse3DI | GCAATG | 2 cut(s) | 1579, 2023 |
| BseMI | GCAATG | 2 cut(s) | 1579, 2023 |
| BseRI | GAGGAG | 5 cut(s) | 363, 1781, 2009, 2635, 3192 |
| BseSI | GKGCMC | 3 cut(s) | 768, 837, 998 |
| BseXI | GCAGC | 9 cut(s) | 17, 256, 310, 844, 934, 2186, 2269, 2272, 3381 |
| BseYI | CCCAGC | 2 cut(s) | 1080, 1185 |
| BsgI | GTGCAG | 1 cut(s) | 288 |
| Bsh1236I | CGCG | 1 cut(s) | 992 |
| BshNI | GGYRCC | 2 cut(s) | 832, 1561 |
| BshTI | ACCGGT | 1 cut(s) | 1923 |
| BsiHKAI | GWGCWC | 5 cut(s) | 768, 2951, 3017, 3083, 3149 |
| BsiHKCI | CYCGRG | 4 cut(s) | 526, 3010, 3076, 3142 |
| BsiSI | CCGG | 5 cut(s) | 177, 527, 1222, 1924, 2888 |
| BsmAI | GTCTC | 7 cut(s) | 1371, 1683, 2422, 2690, 3191, 3476, 3614 |
| BsmBI | CGTCTC | 2 cut(s) | 1371, 3476 |
| BsmI | GAATGC | 2 cut(s) | 537, 3652 |
| BsoBI | CYCGRG | 4 cut(s) | 526, 3010, 3076, 3142 |
| Bsp120I | GGGCCC | 1 cut(s) | 994 |
| Bsp1286I | GDGCHC | 8 cut(s) | 768, 837, 998, 2027, 2951, 3017, 3083, 3149 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 593 |
| BspFNI | CGCG | 1 cut(s) | 992 |
| BspMAI | CTGCAG | 1 cut(s) | 721 |
| BspMI | ACCTGC | 2 cut(s) | 724, 1381 |
| BspPI | GGATC | 7 cut(s) | 39, 124, 836, 849, 1758, 2560, 2751 |
| BspT107I | GGYRCC | 2 cut(s) | 832, 1561 |
| BspTI | CTTAAG | 2 cut(s) | 1357, 1627 |
| BsrBI | CCGCTC | 1 cut(s) | 194 |
| BsrDI | GCAATG | 2 cut(s) | 1579, 2023 |
| BsrFI | RCCGGY | 3 cut(s) | 176, 1923, 2887 |
| BssAI | RCCGGY | 3 cut(s) | 176, 1923, 2887 |
| BssNI | GRCGYC | 1 cut(s) | 3485 |
| BssSI | CACGAG | 1 cut(s) | 801 |
| BssT1I | CCWWGG | 6 cut(s) | 11, 184, 837, 846, 1247, 1287 |
| Bst2BI | CACGAG | 1 cut(s) | 801 |
| Bst4CI | ACNGT | 8 cut(s) | 226, 436, 988, 1011, 1150, 2674, 2762, 3545 |
| Bst6I | CTCTTC | 2 cut(s) | 2037, 2425 |
| BstACI | GRCGYC | 1 cut(s) | 3485 |
| BstAFI | CTTAAG | 2 cut(s) | 1357, 1627 |
| BstBAI | YACGTR | 2 cut(s) | 45, 2219 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 143 |
| BstFNI | CGCG | 1 cut(s) | 992 |
| BstH2I | RGCGCY | 3 cut(s) | 11, 761, 2200 |
| BstHHI | GCGC | 5 cut(s) | 10, 760, 2145, 2199, 3369 |
| BstMAI | GTCTC | 7 cut(s) | 1371, 1683, 2422, 2690, 3191, 3476, 3614 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 186, 368, 1435, 1663, 1708, 1723, 2022, 3303, 3375 |
| BstNSI | RCATGY | 4 cut(s) | 137, 1064, 1429, 1537 |
| BstSFI | CTRYAG | 4 cut(s) | 717, 1014, 3585, 3612 |
| BstSLI | GKGCMC | 3 cut(s) | 768, 837, 998 |
| BstSNI | TACGTA | 1 cut(s) | 45 |
| BstUI | CGCG | 1 cut(s) | 992 |
| BstV1I | GCAGC | 9 cut(s) | 17, 256, 310, 844, 934, 2186, 2269, 2272, 3381 |
| BstX2I | RGATCY | 3 cut(s) | 31, 841, 2552 |
| BstXI | CCANNNNNNTGG | 8 cut(s) | 485, 588, 829, 853, 1088, 1180, 2236, 2642 |
| BstYI | RGATCY | 3 cut(s) | 31, 841, 2552 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1117 |
| BsuI | GTATCC | 1 cut(s) | 483 |
| BtrI | CACGTC | 1 cut(s) | 3165 |
| BtsI | GCAGTG | 1 cut(s) | 2491 |
| BtsIMutI | CAGTG | 7 cut(s) | 231, 1308, 1506, 1674, 2145, 2491, 2767 |
| BveI | ACCTGC | 2 cut(s) | 724, 1381 |
| CaiI | CAGNNNCTG | 3 cut(s) | 34, 761, 2456 |
| CfoI | GCGC | 5 cut(s) | 10, 760, 2145, 2199, 3369 |
| Cfr10I | RCCGGY | 3 cut(s) | 176, 1923, 2887 |
| Cfr9I | CCCGGG | 1 cut(s) | 526 |
| CseI | GACGC | 4 cut(s) | 1178, 1388, 2704, 3493 |
| Csp6I | GTAC | 5 cut(s) | 654, 1927, 2086, 2216, 3261 |
| CspAI | ACCGGT | 1 cut(s) | 1923 |
| CviQI | GTAC | 5 cut(s) | 654, 1927, 2086, 2216, 3261 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3071 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3071 |
| EaeI | YGGCCR | 3 cut(s) | 187, 1250, 2632 |
| Eam1104I | CTCTTC | 2 cut(s) | 2037, 2425 |
| EarI | CTCTTC | 2 cut(s) | 2037, 2425 |
| EciI | GGCGGA | 1 cut(s) | 1182 |
| Eco105I | TACGTA | 1 cut(s) | 45 |
| Eco130I | CCWWGG | 6 cut(s) | 11, 184, 837, 846, 1247, 1287 |
| Eco147I | AGGCCT | 1 cut(s) | 2166 |
| Eco24I | GRGCYC | 2 cut(s) | 998, 2027 |
| Eco47I | GGWCC | 7 cut(s) | 153, 611, 1133, 1643, 1696, 3007, 3590 |
| Eco47III | AGCGCT | 1 cut(s) | 2198 |
| Eco57I | CTGAAG | 2 cut(s) | 273, 2779 |
| Eco81I | CCTNAGG | 1 cut(s) | 1117 |
| Eco88I | CYCGRG | 4 cut(s) | 526, 3010, 3076, 3142 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 143 |
| EcoO109I | RGGNCCY | 2 cut(s) | 416, 995 |
| EcoRI | GAATTC | 1 cut(s) | 628 |
| EcoT14I | CCWWGG | 6 cut(s) | 11, 184, 837, 846, 1247, 1287 |
| EcoT22I | ATGCAT | 2 cut(s) | 1579, 3478 |
| EcoT38I | GRGCYC | 2 cut(s) | 998, 2027 |
| ErhI | CCWWGG | 6 cut(s) | 11, 184, 837, 846, 1247, 1287 |
| Esp3I | CGTCTC | 2 cut(s) | 1371, 3476 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1366, 1398, 2103, 2135, 3041, 3073 |
| FauI | CCCGC | 5 cut(s) | 985, 1431, 3274, 3311, 3359 |
| FauNDI | CATATG | 1 cut(s) | 658 |
| FbaI | TGATCA | 1 cut(s) | 1408 |
| FblI | GTMKAC | 1 cut(s) | 238 |
| FriOI | GRGCYC | 2 cut(s) | 998, 2027 |
| FspBI | CTAG | 6 cut(s) | 444, 1683, 1979, 2312, 3462, 3655 |
| FspI | TGCGCA | 1 cut(s) | 3368 |
| GlaI | GCGC | 5 cut(s) | 9, 759, 2144, 2198, 3368 |
| GsaI | CCCAGC | 2 cut(s) | 1084, 1189 |
| GsuI | CTGGAG | 4 cut(s) | 42, 561, 1248, 2937 |
| HaeII | RGCGCY | 3 cut(s) | 11, 761, 2200 |
| HapII | CCGG | 5 cut(s) | 177, 527, 1222, 1924, 2888 |
| HgaI | GACGC | 4 cut(s) | 1178, 1388, 2704, 3493 |
| HhaI | GCGC | 5 cut(s) | 10, 760, 2145, 2199, 3369 |
| Hin1I | GRCGYC | 1 cut(s) | 3485 |
| Hin6I | GCGC | 5 cut(s) | 8, 758, 2143, 2197, 3367 |
| HinP1I | GCGC | 5 cut(s) | 8, 758, 2143, 2197, 3367 |
| HincII | GTYRAC | 3 cut(s) | 249, 1306, 2719 |
| HindII | GTYRAC | 3 cut(s) | 249, 1306, 2719 |
| HpaII | CCGG | 5 cut(s) | 177, 527, 1222, 1924, 2888 |
| HphI | GGTGA | 6 cut(s) | 1531, 1967, 2444, 2501, 2592, 2657 |
| Hpy188III | TCNNGA | 9 cut(s) | 52, 864, 1276, 1412, 2558, 2690, 3010, 3076, 3142 |
| Hpy99I | CGWCG | 4 cut(s) | 2696, 2906, 2962, 3566 |
| HpyCH4III | ACNGT | 8 cut(s) | 226, 436, 988, 1011, 1150, 2674, 2762, 3545 |
| HpyCH4IV | ACGT | 6 cut(s) | 44, 624, 1963, 2218, 2904, 3164 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 186, 368, 1435, 1663, 1708, 1723, 2022, 3303, 3375 |
| HpySE526I | ACGT | 6 cut(s) | 44, 624, 1963, 2218, 2904, 3164 |
| Hsp92I | GRCGYC | 1 cut(s) | 3485 |
| HspAI | GCGC | 5 cut(s) | 8, 758, 2143, 2197, 3367 |
| KroI | GCCGGC | 1 cut(s) | 176 |
| KroNI | GCCGGC | 1 cut(s) | 178 |
| Ksp22I | TGATCA | 1 cut(s) | 1408 |
| LmnI | GCTCC | 5 cut(s) | 89, 1468, 1768, 2140, 2341 |
| Lsp1109I | GCAGC | 9 cut(s) | 17, 256, 310, 844, 934, 2186, 2269, 2272, 3381 |
| MaeI | CTAG | 6 cut(s) | 444, 1683, 1979, 2312, 3462, 3655 |
| MaeII | ACGT | 6 cut(s) | 44, 624, 1963, 2218, 2904, 3164 |
| MaeIII | GTNAC | 8 cut(s) | 220, 379, 446, 721, 910, 973, 1472, 1916 |
| MbiI | CCGCTC | 1 cut(s) | 194 |
| MfeI | CAATTG | 2 cut(s) | 827, 3516 |
| MflI | RGATCY | 3 cut(s) | 31, 841, 2552 |
| MhlI | GDGCHC | 8 cut(s) | 768, 837, 998, 2027, 2951, 3017, 3083, 3149 |
| MlsI | TGGCCA | 2 cut(s) | 1252, 2634 |
| MluNI | TGGCCA | 2 cut(s) | 1252, 2634 |
| MmeI | TCCRAC | 4 cut(s) | 1132, 1138, 1343, 1627 |
| Mox20I | TGGCCA | 2 cut(s) | 1252, 2634 |
| Mph1103I | ATGCAT | 2 cut(s) | 1579, 3478 |
| MroNI | GCCGGC | 1 cut(s) | 176 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1352, 3056, 3650 |
| MscI | TGGCCA | 2 cut(s) | 1252, 2634 |
| MseI | TTAA | 4 cut(s) | 1358, 1628, 2136, 2802 |
| MslI | CAYNNNNRTG | 5 cut(s) | 84, 426, 1572, 2395, 2640 |
| Msp20I | TGGCCA | 2 cut(s) | 1252, 2634 |
| MspA1I | CMGCKG | 5 cut(s) | 539, 597, 1268, 1640, 1744 |
| MspCI | CTTAAG | 2 cut(s) | 1357, 1627 |
| MspI | CCGG | 5 cut(s) | 177, 527, 1222, 1924, 2888 |
| MunI | CAATTG | 2 cut(s) | 827, 3516 |
| Mva1269I | GAATGC | 2 cut(s) | 537, 3652 |
| MvnI | CGCG | 1 cut(s) | 992 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 186, 368, 1435, 1663, 1708, 1723, 2022, 3303, 3375 |
| NaeI | GCCGGC | 1 cut(s) | 178 |
| NciI | CCSGG | 3 cut(s) | 527, 528, 1222 |
| NdeI | CATATG | 1 cut(s) | 658 |
| NgoMIV | GCCGGC | 1 cut(s) | 176 |
| NmeAIII | GCCGAG | 2 cut(s) | 215, 3136 |
| NmuCI | GTSAC | 1 cut(s) | 1916 |
| NsbI | TGCGCA | 1 cut(s) | 3368 |
| NsiI | ATGCAT | 2 cut(s) | 1579, 3478 |
| NspI | RCATGY | 4 cut(s) | 137, 1064, 1429, 1537 |
| OliI | CACNNNNGTG | 1 cut(s) | 426 |
| PaeI | GCATGC | 2 cut(s) | 1064, 1429 |
| PaqCI | CACCTGC | 1 cut(s) | 724 |
| PasI | CCCWGGG | 1 cut(s) | 1228 |
| PceI | AGGCCT | 1 cut(s) | 2166 |
| PciI | ACATGT | 1 cut(s) | 133 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2615 |
| PctI | GAATGC | 2 cut(s) | 537, 3652 |
| PdiI | GCCGGC | 1 cut(s) | 178 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1352, 3056, 3650 |
| PflFI | GACNNNGTC | 4 cut(s) | 3005, 3071, 3137, 3251 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1619, 1640 |
| PfoI | TCCNGGA | 1 cut(s) | 2271 |
| PinAI | ACCGGT | 1 cut(s) | 1923 |
| Ppu21I | YACGTR | 2 cut(s) | 45, 2219 |
| PscI | ACATGT | 1 cut(s) | 133 |
| PsiI | TTATAA | 1 cut(s) | 204 |
| PspFI | CCCAGC | 2 cut(s) | 1080, 1185 |
| PspOMI | GGGCCC | 1 cut(s) | 994 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 798, 830, 2599, 2631 |
| PstI | CTGCAG | 1 cut(s) | 721 |
| PstNI | CAGNNNCTG | 3 cut(s) | 34, 761, 2456 |
| PsuI | RGATCY | 3 cut(s) | 31, 841, 2552 |
| PsyI | GACNNNGTC | 4 cut(s) | 3005, 3071, 3137, 3251 |
| PvuII | CAGCTG | 3 cut(s) | 539, 1268, 1640 |
| RsaI | GTAC | 5 cut(s) | 655, 1928, 2087, 2217, 3262 |
| RsaNI | GTAC | 5 cut(s) | 654, 1927, 2086, 2216, 3261 |
| RseI | CAYNNNNRTG | 5 cut(s) | 84, 426, 1572, 2395, 2640 |
| SaqAI | TTAA | 4 cut(s) | 1358, 1628, 2136, 2802 |
| SduI | GDGCHC | 8 cut(s) | 768, 837, 998, 2027, 2951, 3017, 3083, 3149 |
| SfcI | CTRYAG | 4 cut(s) | 717, 1014, 3585, 3612 |
| SinI | GGWCC | 7 cut(s) | 153, 611, 1133, 1643, 1696, 3007, 3590 |
| SmaI | CCCGGG | 1 cut(s) | 528 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 84, 426, 1572, 2395, 2640 |
| SmlI | CTYRAG | 4 cut(s) | 1357, 1593, 1627, 2168 |
| SmoI | CTYRAG | 4 cut(s) | 1357, 1593, 1627, 2168 |
| SnaBI | TACGTA | 1 cut(s) | 45 |
| SpeI | ACTAGT | 1 cut(s) | 443 |
| SphI | GCATGC | 2 cut(s) | 1064, 1429 |
| SseBI | AGGCCT | 1 cut(s) | 2166 |
| SspMI | CTAG | 6 cut(s) | 444, 1683, 1979, 2312, 3462, 3655 |
| StuI | AGGCCT | 1 cut(s) | 2166 |
| StyI | CCWWGG | 6 cut(s) | 11, 184, 837, 846, 1247, 1287 |
| TaaI | ACNGT | 8 cut(s) | 226, 436, 988, 1011, 1150, 2674, 2762, 3545 |
| TaiI | ACGT | 6 cut(s) | 47, 627, 1966, 2221, 2907, 3167 |
| TaqII | GACCGA | 1 cut(s) | 2995 |
| TatI | WGTACW | 2 cut(s) | 653, 3260 |
| TauI | GCSGC | 4 cut(s) | 404, 600, 1127, 3272 |
| Tru1I | TTAA | 4 cut(s) | 1358, 1628, 2136, 2802 |
| Tru9I | TTAA | 4 cut(s) | 1358, 1628, 2136, 2802 |
| TscAI | CASTG | 7 cut(s) | 231, 1315, 1506, 1674, 2152, 2491, 2767 |
| TseFI | GTSAC | 1 cut(s) | 1916 |
| TseI | GCWGC | 9 cut(s) | 5, 269, 323, 857, 922, 2199, 2260, 2282, 3369 |
| Tsp45I | GTSAC | 1 cut(s) | 1916 |
| TspDTI | ATGAA | 5 cut(s) | 1038, 1842, 2310, 2433, 3303 |
| TspGWI | ACGGA | 5 cut(s) | 1335, 1865, 2045, 2565, 2863 |
| TspMI | CCCGGG | 1 cut(s) | 526 |
| TspRI | CASTG | 7 cut(s) | 231, 1315, 1506, 1674, 2152, 2491, 2767 |
| Tth111I | GACNNNGTC | 4 cut(s) | 3005, 3071, 3137, 3251 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1619, 1640 |
| Vha464I | CTTAAG | 2 cut(s) | 1357, 1627 |
| VneI | GTGCAC | 1 cut(s) | 764 |
| VpaK11BI | GGWCC | 7 cut(s) | 153, 611, 1133, 1643, 1696, 3007, 3590 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 143 |
| XapI | RAATTY | 7 cut(s) | 121, 628, 636, 1161, 1348, 2102, 2185 |
| XceI | RCATGY | 4 cut(s) | 137, 1064, 1429, 1537 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1064 |
| XmaI | CCCGGG | 1 cut(s) | 526 |
| XmiI | GTMKAC | 1 cut(s) | 238 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1352, 3056, 3650 |
| XspI | CTAG | 6 cut(s) | 444, 1683, 1979, 2312, 3462, 3655 |
| Zsp2I | ATGCAT | 2 cut(s) | 1579, 3478 |