No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G23270 AT1G31460 |
| fragaria_vesca | FvH4_5g24380 |
| malus_domestica | MD16G1288300.v1.1 |
| prunus_persica | Prupe.5G017000_v2.0.a1 |
| pyrus_communis | pycom16g25600 |
| rosa_chinensis | RchiOBHm_Chr7g0214771 |
| rosa_laevigata | RLG00000002723 RLG00000020760 |
| rosa_multiflora | Rmu_co8342721.1_g000001 Rmu_sc0002308.1_g000045 Rmu_sc0026107.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00245100 |
| rosa_rugosa | Rorug06G0112700 |
| rosa_samantha | Rh7AG283900 Rh7BG274500 Rh7CG303300 Rh7DG287200 |
| rosa_wichuraiana | Rw7G024200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 481 |
| AclI | AACGTT | 1 cut(s) | 270 |
| AcuI | CTGAAG | 1 cut(s) | 390 |
| AdeI | CACNNNGTG | 1 cut(s) | 389 |
| AflIII | ACRYGT | 1 cut(s) | 456 |
| AgeI | ACCGGT | 1 cut(s) | 467 |
| AgsI | TTSAA | 1 cut(s) | 80 |
| AluBI | AGCT | 3 cut(s) | 35, 59, 532 |
| AluI | AGCT | 3 cut(s) | 35, 59, 532 |
| Alw26I | GTCTC | 1 cut(s) | 164 |
| Ama87I | CYCGRG | 2 cut(s) | 481, 492 |
| AsiGI | ACCGGT | 1 cut(s) | 467 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 271, 424 |
| AsuHPI | GGTGA | 2 cut(s) | 103, 236 |
| AvaI | CYCGRG | 2 cut(s) | 481, 492 |
| BauI | CACGAG | 1 cut(s) | 384 |
| BbsI | GAAGAC | 1 cut(s) | 192 |
| BccI | CCATC | 1 cut(s) | 302 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 104, 138 |
| BcoDI | GTCTC | 1 cut(s) | 164 |
| BmeT110I | CYCGRG | 2 cut(s) | 481, 492 |
| BpiI | GAAGAC | 1 cut(s) | 192 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 475, 507 |
| BsaWI | WCCGGW | 2 cut(s) | 172, 467 |
| Bse118I | RCCGGY | 1 cut(s) | 467 |
| Bse1I | ACTGG | 1 cut(s) | 22 |
| BseGI | GGATG | 1 cut(s) | 294 |
| BseMII | CTCAG | 2 cut(s) | 240, 291 |
| BseNI | ACTGG | 1 cut(s) | 22 |
| BshTI | ACCGGT | 1 cut(s) | 467 |
| BsiHKCI | CYCGRG | 2 cut(s) | 481, 492 |
| BsiSI | CCGG | 2 cut(s) | 173, 468 |
| BsmAI | GTCTC | 1 cut(s) | 164 |
| BsmBI | CGTCTC | 1 cut(s) | 164 |
| BsoBI | CYCGRG | 2 cut(s) | 481, 492 |
| Bsp143I | GATC | 1 cut(s) | 64 |
| BspCNI | CTCAG | 2 cut(s) | 241, 290 |
| BspQI | GCTCTTC | 1 cut(s) | 132 |
| BsrFI | RCCGGY | 1 cut(s) | 467 |
| BsrI | ACTGG | 1 cut(s) | 22 |
| BssAI | RCCGGY | 1 cut(s) | 467 |
| BssMI | GATC | 1 cut(s) | 64 |
| BssSI | CACGAG | 1 cut(s) | 384 |
| Bst2BI | CACGAG | 1 cut(s) | 384 |
| Bst4CI | ACNGT | 1 cut(s) | 101 |
| Bst6I | CTCTTC | 2 cut(s) | 132, 174 |
| BstDEI | CTNAG | 3 cut(s) | 249, 277, 414 |
| BstF5I | GGATG | 1 cut(s) | 294 |
| BstKTI | GATC | 1 cut(s) | 67 |
| BstMAI | GTCTC | 1 cut(s) | 164 |
| BstMBI | GATC | 1 cut(s) | 64 |
| BstV2I | GAAGAC | 1 cut(s) | 192 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 235 |
| BtsCI | GGATG | 1 cut(s) | 294 |
| BtsI | GCAGTG | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| Cfr10I | RCCGGY | 1 cut(s) | 467 |
| CspAI | ACCGGT | 1 cut(s) | 467 |
| CviAII | CATG | 2 cut(s) | 235, 537 |
| CviJI | RGCY | 5 cut(s) | 35, 59, 108, 394, 532 |
| CviKI_1 | RGCY | 5 cut(s) | 35, 59, 108, 394, 532 |
| DdeI | CTNAG | 3 cut(s) | 249, 277, 414 |
| DpnI | GATC | 1 cut(s) | 66 |
| DpnII | GATC | 1 cut(s) | 64 |
| DraIII | CACNNNGTG | 1 cut(s) | 389 |
| Eam1104I | CTCTTC | 2 cut(s) | 132, 174 |
| EarI | CTCTTC | 2 cut(s) | 132, 174 |
| Eco57I | CTGAAG | 1 cut(s) | 390 |
| Eco88I | CYCGRG | 2 cut(s) | 481, 492 |
| Esp3I | CGTCTC | 1 cut(s) | 164 |
| FaeI | CATG | 2 cut(s) | 238, 540 |
| FaiI | YATR | 2 cut(s) | 236, 538 |
| FatI | CATG | 2 cut(s) | 234, 536 |
| FokI | GGATG | 1 cut(s) | 281 |
| HapII | CCGG | 2 cut(s) | 173, 468 |
| Hin1II | CATG | 2 cut(s) | 238, 540 |
| HindIII | AAGCTT | 1 cut(s) | 530 |
| HinfI | GANTC | 4 cut(s) | 29, 188, 323, 401 |
| HpaII | CCGG | 2 cut(s) | 173, 468 |
| HphI | GGTGA | 2 cut(s) | 103, 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 152 |
| Hpy188I | TCNGA | 1 cut(s) | 372 |
| Hpy188III | TCNNGA | 9 cut(s) | 77, 140, 180, 352, 384, 438, 492, 494, 508 |
| Hpy8I | GTNNAC | 1 cut(s) | 152 |
| Hpy99I | CGWCG | 2 cut(s) | 119, 159 |
| HpyAV | CCTTC | 1 cut(s) | 491 |
| HpyCH4III | ACNGT | 1 cut(s) | 101 |
| HpyCH4IV | ACGT | 5 cut(s) | 72, 154, 270, 364, 456 |
| HpyCH4V | TGCA | 1 cut(s) | 515 |
| HpyF3I | CTNAG | 3 cut(s) | 249, 277, 414 |
| HpySE526I | ACGT | 5 cut(s) | 72, 154, 270, 364, 456 |
| Hsp92II | CATG | 2 cut(s) | 238, 540 |
| Kzo9I | GATC | 1 cut(s) | 64 |
| LguI | GCTCTTC | 1 cut(s) | 132 |
| LpnPI | CCDG | 7 cut(s) | 3, 90, 186, 261, 393, 481, 539 |
| MaeII | ACGT | 5 cut(s) | 72, 154, 270, 364, 456 |
| MaeIII | GTNAC | 3 cut(s) | 242, 381, 500 |
| MalI | GATC | 1 cut(s) | 66 |
| MboI | GATC | 1 cut(s) | 64 |
| MboII | GAAGA | 7 cut(s) | 119, 161, 192, 220, 265, 276, 396 |
| MluCI | AATT | 1 cut(s) | 420 |
| MlyI | GAGTC | 1 cut(s) | 182 |
| MmeI | TCCRAC | 1 cut(s) | 283 |
| MnlI | CCTC | 7 cut(s) | 34, 286, 328, 380, 472, 477, 490 |
| MroXI | GAANNNNTTC | 2 cut(s) | 271, 424 |
| MspA1I | CMGCKG | 1 cut(s) | 35 |
| MspI | CCGG | 2 cut(s) | 173, 468 |
| NdeII | GATC | 1 cut(s) | 64 |
| NlaIII | CATG | 2 cut(s) | 238, 540 |
| NmuCI | GTSAC | 2 cut(s) | 242, 381 |
| PaeR7I | CTCGAG | 2 cut(s) | 481, 492 |
| PciSI | GCTCTTC | 1 cut(s) | 132 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 203, 434, 479 |
| PdmI | GAANNNNTTC | 2 cut(s) | 271, 424 |
| PfeI | GAWTC | 3 cut(s) | 29, 323, 401 |
| PinAI | ACCGGT | 1 cut(s) | 467 |
| PleI | GAGTC | 1 cut(s) | 182 |
| PpsI | GAGTC | 1 cut(s) | 182 |
| Psp1406I | AACGTT | 1 cut(s) | 270 |
| PspXI | VCTCGAGB | 1 cut(s) | 481 |
| PvuII | CAGCTG | 1 cut(s) | 35 |
| SapI | GCTCTTC | 1 cut(s) | 132 |
| Sau3AI | GATC | 1 cut(s) | 64 |
| SchI | GAGTC | 1 cut(s) | 182 |
| Sfr274I | CTCGAG | 2 cut(s) | 481, 492 |
| SlaI | CTCGAG | 2 cut(s) | 481, 492 |
| SmlI | CTYRAG | 2 cut(s) | 481, 492 |
| SmoI | CTYRAG | 2 cut(s) | 481, 492 |
| Sse9I | AATT | 1 cut(s) | 420 |
| TaaI | ACNGT | 1 cut(s) | 101 |
| TaiI | ACGT | 5 cut(s) | 75, 157, 273, 367, 459 |
| TaqI | TCGA | 8 cut(s) | 181, 353, 428, 437, 473, 482, 493, 509 |
| TasI | AATT | 1 cut(s) | 420 |
| TfiI | GAWTC | 3 cut(s) | 29, 323, 401 |
| TscAI | CASTG | 1 cut(s) | 127 |
| TseFI | GTSAC | 2 cut(s) | 242, 381 |
| Tsp45I | GTSAC | 2 cut(s) | 242, 381 |
| TspDTI | ATGAA | 2 cut(s) | 315, 423 |
| TspRI | CASTG | 1 cut(s) | 127 |
| XhoI | CTCGAG | 2 cut(s) | 481, 492 |
| XmnI | GAANNNNTTC | 2 cut(s) | 271, 424 |