Ring finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G24580 AT1G67856 |
| fragaria_vesca | FvH4_4g25700 |
| malus_domestica | MD08G1159300.v1.1 MD13G1099900.v1.1 MD16G1100900.v1.1 |
| prunus_persica | Prupe.1G246100_v2.0.a1 Prupe.1G246100_v2.0.a1 Prupe.1G246100_v2.0.a1 |
| pyrus_communis | pycom13g08730 pycom16g08540 |
| rosa_chinensis | RchiOBHm_Chr4g0433131 |
| rosa_laevigata | RLG00000006782 |
| rosa_multiflora | Rmu_co8009482.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00374610 |
| rosa_rugosa | Rorug04G0265700 |
| rosa_samantha | Rh4BG328000 Rh4CG343400 Rh4DG323200 |
| rosa_wichuraiana | Rw4G027770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 372 |
| AcuI | CTGAAG | 1 cut(s) | 180 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AgsI | TTSAA | 4 cut(s) | 72, 85, 110, 202 |
| AluBI | AGCT | 1 cut(s) | 332 |
| AluI | AGCT | 1 cut(s) | 332 |
| Alw26I | GTCTC | 3 cut(s) | 11, 119, 210 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 332, 364 |
| AspS9I | GGNCC | 1 cut(s) | 384 |
| AsuHPI | GGTGA | 2 cut(s) | 64, 106 |
| AvaII | GGWCC | 1 cut(s) | 384 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 24, 30, 56, 62 |
| BcoDI | GTCTC | 3 cut(s) | 11, 119, 210 |
| BfaI | CTAG | 3 cut(s) | 177, 338, 394 |
| BfuAI | ACCTGC | 1 cut(s) | 372 |
| BmcAI | AGTACT | 1 cut(s) | 39 |
| Bme18I | GGWCC | 1 cut(s) | 384 |
| BmgT120I | GGNCC | 1 cut(s) | 384 |
| BmsI | GCATC | 1 cut(s) | 128 |
| BsaI | GGTCTC | 1 cut(s) | 11 |
| BsaJI | CCNNGG | 1 cut(s) | 138 |
| Bse1I | ACTGG | 1 cut(s) | 350 |
| BseDI | CCNNGG | 1 cut(s) | 138 |
| BseGI | GGATG | 1 cut(s) | 119 |
| BseNI | ACTGG | 1 cut(s) | 350 |
| BsmAI | GTCTC | 3 cut(s) | 11, 119, 210 |
| Bso31I | GGTCTC | 1 cut(s) | 11 |
| Bsp19I | CCATGG | 1 cut(s) | 138 |
| BspMI | ACCTGC | 1 cut(s) | 372 |
| BspTNI | GGTCTC | 1 cut(s) | 11 |
| BsrI | ACTGG | 1 cut(s) | 350 |
| BssECI | CCNNGG | 1 cut(s) | 138 |
| BssT1I | CCWWGG | 1 cut(s) | 138 |
| Bst4CI | ACNGT | 2 cut(s) | 64, 198 |
| Bst6I | CTCTTC | 3 cut(s) | 219, 231, 279 |
| BstC8I | GCNNGC | 1 cut(s) | 314 |
| BstDSI | CCRYGG | 1 cut(s) | 138 |
| BstF5I | GGATG | 1 cut(s) | 119 |
| BstMAI | GTCTC | 3 cut(s) | 11, 119, 210 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 378 |
| BstNSI | RCATGY | 1 cut(s) | 372 |
| BtgI | CCRYGG | 1 cut(s) | 138 |
| BtsCI | GGATG | 1 cut(s) | 119 |
| BveI | ACCTGC | 1 cut(s) | 372 |
| Cac8I | GCNNGC | 1 cut(s) | 314 |
| Cfr13I | GGNCC | 1 cut(s) | 384 |
| CseI | GACGC | 1 cut(s) | 15 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 314, 349 |
| CviAII | CATG | 3 cut(s) | 91, 139, 369 |
| CviJI | RGCY | 2 cut(s) | 157, 332 |
| CviKI_1 | RGCY | 2 cut(s) | 157, 332 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DraI | TTTAAA | 1 cut(s) | 277 |
| Eam1104I | CTCTTC | 3 cut(s) | 219, 231, 279 |
| EarI | CTCTTC | 3 cut(s) | 219, 231, 279 |
| Eco130I | CCWWGG | 1 cut(s) | 138 |
| Eco31I | GGTCTC | 1 cut(s) | 11 |
| Eco47I | GGWCC | 1 cut(s) | 384 |
| Eco57I | CTGAAG | 1 cut(s) | 180 |
| EcoT14I | CCWWGG | 1 cut(s) | 138 |
| ErhI | CCWWGG | 1 cut(s) | 138 |
| FaeI | CATG | 3 cut(s) | 94, 142, 372 |
| FaiI | YATR | 5 cut(s) | 92, 140, 211, 221, 370 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 305, 337 |
| FatI | CATG | 3 cut(s) | 90, 138, 368 |
| FokI | GGATG | 1 cut(s) | 106 |
| FspBI | CTAG | 3 cut(s) | 177, 338, 394 |
| HgaI | GACGC | 1 cut(s) | 15 |
| Hin1II | CATG | 3 cut(s) | 94, 142, 372 |
| HinfI | GANTC | 2 cut(s) | 131, 183 |
| HphI | GGTGA | 2 cut(s) | 64, 106 |
| Hpy188I | TCNGA | 2 cut(s) | 31, 124 |
| Hpy188III | TCNNGA | 2 cut(s) | 187, 338 |
| Hpy99I | CGWCG | 1 cut(s) | 155 |
| HpyAV | CCTTC | 1 cut(s) | 26 |
| HpyCH4III | ACNGT | 2 cut(s) | 64, 198 |
| HpyCH4V | TGCA | 3 cut(s) | 119, 312, 381 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 378 |
| Hsp92II | CATG | 3 cut(s) | 94, 142, 372 |
| LpnPI | CCDG | 4 cut(s) | 35, 171, 331, 367 |
| LweI | GCATC | 1 cut(s) | 128 |
| MaeI | CTAG | 3 cut(s) | 177, 338, 394 |
| MaeIII | GTNAC | 1 cut(s) | 172 |
| MluCI | AATT | 1 cut(s) | 111 |
| MmeI | TCCRAC | 1 cut(s) | 44 |
| MnlI | CCTC | 5 cut(s) | 90, 220, 274, 280, 384 |
| MseI | TTAA | 1 cut(s) | 276 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 378 |
| NcoI | CCATGG | 1 cut(s) | 138 |
| NlaIII | CATG | 3 cut(s) | 94, 142, 372 |
| NspI | RCATGY | 1 cut(s) | 372 |
| PfeI | GAWTC | 2 cut(s) | 131, 183 |
| PspPI | GGNCC | 1 cut(s) | 384 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| SaqAI | TTAA | 1 cut(s) | 276 |
| Sau96I | GGNCC | 1 cut(s) | 384 |
| ScaI | AGTACT | 1 cut(s) | 39 |
| SetI | ASST | 4 cut(s) | 101, 247, 334, 386 |
| SfaNI | GCATC | 1 cut(s) | 128 |
| SinI | GGWCC | 1 cut(s) | 384 |
| Sse9I | AATT | 1 cut(s) | 111 |
| SspMI | CTAG | 3 cut(s) | 177, 338, 394 |
| StyI | CCWWGG | 1 cut(s) | 138 |
| TaaI | ACNGT | 2 cut(s) | 64, 198 |
| TaqI | TCGA | 1 cut(s) | 188 |
| TasI | AATT | 1 cut(s) | 111 |
| TatI | WGTACW | 1 cut(s) | 37 |
| TfiI | GAWTC | 2 cut(s) | 131, 183 |
| Tru1I | TTAA | 1 cut(s) | 276 |
| Tru9I | TTAA | 1 cut(s) | 276 |
| TspDTI | ATGAA | 1 cut(s) | 71 |
| VpaK11BI | GGWCC | 1 cut(s) | 384 |
| XbaI | TCTAGA | 1 cut(s) | 337 |
| XceI | RCATGY | 1 cut(s) | 372 |
| XspI | CTAG | 3 cut(s) | 177, 338, 394 |
| ZrmI | AGTACT | 1 cut(s) | 39 |