Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006976

Physical Location & Seq

Genomic Coordinates Reverse (-)

11259851 .. 11261234

Gene Structure 1384 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G31450.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGCAACCAAAACTTTTCTCTACTGTTCTCTCTTAGCCATCAGCTTCTTCTTTGCTTCCAATTCTTCAGCTAACCGAGAGAACTTAACCGTCGAGCTAATCCACCGTGACTCTCCTCATTCTCCACTCTACAACCCTCACCACACTGTCTCTGACCGTCTCAACGCTGCTTTCCTCCGATCAATCTCACGTTCTCGCCGTTTCACAACCAAAACCGATCTCCAATCCGGTTTAATCTCAAATGGCGGCGAATACTTCATGTCCATCTCAATCGGTACTCCACCGTCGAAAGTTTTCGCCATTGCTGACACGGGAAGTGACCTAACTTGGGTCCAATGTAAGCCATGTCAACAATGTTACAAACAAAACAGTCCACTCTTCGACAAGAAGAAATCTTCCACCTACAAAACAGAATCTTGCGATTCAAAAACCTGTCAAGCCTTGTCCGAACACGAAGAAGGATGCGACGAATCTAAAGACATCTGCAAATACCGTTACTCTTATGGAGATAATTCGTTTACCAAAGGAGATGTTGCGACCGAAACAATCTCCATTGATTCTTCCTCTGGCTCCTCTGTTTCTTTCCCCGGTACTGTCTTTGGTTGCGGCTACAACAACGGTGGTACATTCGAAGAAACCGGATCCGGAATCATCGGACTCGGAGGTGGTCCATTATCGTTAGTTTCCCAGCTTGGTTCTTCCATAGGGAAGAAATTCTCGTATTGCTTGTCACACACGGCAGCTACAACAAACGGCACAAGCGTCATAAACCTAGGAACCAACTCGATACCTTCCAATCCAAGCAAAGACTCCGCTACGCTCACTACACCCTTAATCCAAAAAGACCCCGAGACTTACTATTTCTTGACACTCGAAGCAGTCACCGTCGGCAAAACCAAGCTTCCATACACCGGAGGAGGATACGGATTAAACGGGAAATCATCAAAGAGAACCGGAAACATCATAATCGATTCCGGTACAACCCTTACCCTTCTCGACTCAGGATTTTACGATGACTTTGGTACGGCCGTGGAAGAATCAGTAACCGGAGCAAAGCGTGTGAGTGATCCACAAGGGCTTTTAACACATTGTTTCAAATCCGGAGACAAAGAGATCGGTTTGCCGGCGATAACAATGCATTTCACGAACGCCGACGTGAAGCTGAGTCCGATAAACGCGTTCGTGAAACTAAATGAAGATACAGTGTGCTTGAGTATGATTCCGACAACTGAAGTTGCTATATACGGAAACATGGTTCAAATGGATTTCCTTGTTGGCTATGACTTGGAGACCAAAACGGTATCGTTTCAACGCATGGATTGCTCCGGGAACTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0005575 GO:0005576 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009617 GO:0010310 GO:0010337 GO:0010565 GO:0010817 GO:0016787 GO:0019222 GO:0019538 GO:0030163 GO:0031323 GO:0032350 GO:0042742 GO:0043170 GO:0043207 GO:0044238 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051193 GO:0051704 GO:0051707 GO:0062012 GO:0065007 GO:0065008 GO:0070001 GO:0070011 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000377

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

445

Amino Acids

47.91

Weight (kDa)

5.8

Isoelectric Point (pI)

35.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	84 - 139	1.1e-09	Eukaryotic aspartyl protease
TAXi_N	PF14543	85 - 259	2.4e-57	Xylanase inhibitor N-terminal
Asp	PF00026	165 - 436	7.3e-09	Eukaryotic aspartyl protease
TAXi_C	PF14541	287 - 437	8.2e-23	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31450 AT2G35615
fragaria_vesca	FvH4_1g21300 FvH4_5g24370
malus_domestica	MD06G1021800.v1.1 MD16G1288400.v1.1
prunus_persica	Prupe.5G017100_v2.0.a1
pyrus_communis	pycom06g01570
rosa_chinensis	RchiOBHm_Chr2g0115131 RchiOBHm_Chr7g0214751
rosa_laevigata	RLG00000002724 RLG00000018161
rosa_roxburghii	Rroxscaffold_2G00130610 Rroxscaffold_3G00245120
rosa_rugosa	Rorug02G0193900
rosa_samantha	Rh2AG252400 Rh2BG261900 Rh2CG256900 Rh2DG260600 Rh7AG283700 Rh7BG274400 Rh7CG303100 Rh7DG287100
rosa_wichuraiana	Rw2G019680 Rw7G024190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	1178
AccIII	TCCGGA	2 cut(s)	644, 1100
AciI	CCGC	3 cut(s)	246, 606, 813
AclWI	GGATC	3 cut(s)	636, 649, 1061
AcoI	YGGCCR	1 cut(s)	1026
AcsI	RAATTY	1 cut(s)	713
AcuI	CTGAAG	2 cut(s)	51, 1251
AfaI	GTAC	5 cut(s)	277, 592, 625, 979, 1024
AfiI	CCNNNNNNNGG	2 cut(s)	328, 911
AflIII	ACRYGT	1 cut(s)	1176
AgsI	TTSAA	4 cut(s)	426, 1096, 1259, 1310
AjiI	CACGTC	1 cut(s)	1156
AloI	GAACNNNNNNTCC	2 cut(s)	1239, 1271
AluBI	AGCT	7 cut(s)	45, 71, 97, 691, 743, 901, 1162
AluI	AGCT	7 cut(s)	45, 71, 97, 691, 743, 901, 1162
Alw26I	GTCTC	5 cut(s)	154, 164, 845, 1098, 1283
AlwI	GGATC	3 cut(s)	636, 649, 1061
Ama87I	CYCGRG	1 cut(s)	848
Aor13HI	TCCGGA	2 cut(s)	644, 1100
AoxI	GGCC	1 cut(s)	1026
ApeKI	GCWGC	2 cut(s)	167, 740
ApoI	RAATTY	1 cut(s)	713
Asp700I	GAANNNNTTC	2 cut(s)	293, 713
AspA2I	CCTAGG	1 cut(s)	772
AspS9I	GGNCC	2 cut(s)	331, 668
AsuC2I	CCSGG	2 cut(s)	588, 1327
AsuHPI	GGTGA	2 cut(s)	131, 874
AsuII	TTCGAA	1 cut(s)	630
AvaI	CYCGRG	1 cut(s)	848
AvaII	GGWCC	2 cut(s)	331, 668
AvrII	CCTAGG	1 cut(s)	772
BaeI	ACNNNNGTAYC	2 cut(s)	1014, 1047
BamHI	GGATCC	1 cut(s)	641
BbvI	GCAGC	2 cut(s)	154, 752
BccI	CCATC	2 cut(s)	47, 272
BceAI	ACGGC	5 cut(s)	183, 753, 769, 1013, 1041
BcgI	CGANNNNNNTGC	2 cut(s)	1117, 1151
BciVI	GTATCC	1 cut(s)	914
BcnI	CCSGG	2 cut(s)	588, 1327
BcoDI	GTCTC	5 cut(s)	154, 164, 845, 1098, 1283
BfaI	CTAG	1 cut(s)	773
BfuI	GTATCC	1 cut(s)	914
BisI	GCNGC	4 cut(s)	168, 247, 607, 741
BlnI	CCTAGG	1 cut(s)	772
BlsI	GCNGC	4 cut(s)	169, 248, 608, 742
Bme1390I	CCNGG	2 cut(s)	588, 1327
Bme18I	GGWCC	2 cut(s)	331, 668
BmeT110I	CYCGRG	1 cut(s)	848
BmgBI	CACGTC	1 cut(s)	1156
BmgT120I	GGNCC	2 cut(s)	331, 668
BmiI	GGNNCC	4 cut(s)	332, 571, 643, 778
BmrFI	CCNGG	2 cut(s)	588, 1327
BmsI	GCATC	1 cut(s)	452
Bpu14I	TTCGAA	1 cut(s)	630
BpuEI	CTTGAG	1 cut(s)	1231
BpuMI	CCSGG	2 cut(s)	588, 1327
Bsa29I	ATCGAT	1 cut(s)	969
BsaI	GGTCTC	1 cut(s)	1283
BsaJI	CCNNGG	3 cut(s)	586, 772, 1029
BsaWI	WCCGGW	8 cut(s)	227, 638, 644, 911, 953, 974, 1046, 1100
Bsc4I	CCNNNNNNNGG	2 cut(s)	328, 911
Bse118I	RCCGGY	1 cut(s)	1123
Bse3DI	GCAATG	1 cut(s)	300
BseAI	TCCGGA	2 cut(s)	644, 1100
BseCI	ATCGAT	1 cut(s)	969
BseDI	CCNNGG	3 cut(s)	586, 772, 1029
BseGI	GGATG	1 cut(s)	467
BseLI	CCNNNNNNNGG	2 cut(s)	328, 911
BseMI	GCAATG	1 cut(s)	300
BseMII	CTCAG	2 cut(s)	1014, 1154
BseRI	GAGGAG	3 cut(s)	105, 562, 930
BseX3I	CGGCCG	1 cut(s)	1026
BseXI	GCAGC	2 cut(s)	154, 752
BseYI	CCCAGC	1 cut(s)	687
Bsh1236I	CGCG	1 cut(s)	1178
Bsh1285I	CGRYCG	2 cut(s)	540, 1029
BshFI	GGCC	1 cut(s)	1028
BshVI	ATCGAT	1 cut(s)	969
BsiEI	CGRYCG	2 cut(s)	540, 1029
BsiHKCI	CYCGRG	1 cut(s)	848
BslI	CCNNNNNNNGG	2 cut(s)	328, 911
BsmAI	GTCTC	5 cut(s)	154, 164, 845, 1098, 1283
BsmBI	CGTCTC	1 cut(s)	164
BsnI	GGCC	1 cut(s)	1028
Bso31I	GGTCTC	1 cut(s)	1283
BsoBI	CYCGRG	1 cut(s)	848
Bsp119I	TTCGAA	1 cut(s)	630
Bsp13I	TCCGGA	2 cut(s)	644, 1100
Bsp143I	GATC	5 cut(s)	179, 217, 641, 1066, 1113
BspACI	CCGC	3 cut(s)	246, 606, 813
BspANI	GGCC	1 cut(s)	1028
BspCNI	CTCAG	2 cut(s)	1013, 1155
BspDI	ATCGAT	1 cut(s)	969
BspEI	TCCGGA	2 cut(s)	644, 1100
BspFNI	CGCG	1 cut(s)	1178
BspLI	GGNNCC	4 cut(s)	332, 571, 643, 778
BspPI	GGATC	3 cut(s)	636, 649, 1061
BspT104I	TTCGAA	1 cut(s)	630
BspTNI	GGTCTC	1 cut(s)	1283
BsrDI	GCAATG	1 cut(s)	300
BsrFI	RCCGGY	1 cut(s)	1123
BssAI	RCCGGY	1 cut(s)	1123
BssECI	CCNNGG	3 cut(s)	586, 772, 1029
BssMI	GATC	5 cut(s)	179, 217, 641, 1066, 1113
BssT1I	CCWWGG	1 cut(s)	772
Bst6I	CTCTTC	1 cut(s)	383
BstAPI	GCANNNNNTGC	1 cut(s)	1320
BstBI	TTCGAA	1 cut(s)	630
BstC8I	GCNNGC	1 cut(s)	1125
BstDEI	CTNAG	3 cut(s)	34, 1000, 1163
BstDSI	CCRYGG	1 cut(s)	1029
BstF5I	GGATG	1 cut(s)	467
BstFNI	CGCG	1 cut(s)	1178
BstKTI	GATC	5 cut(s)	182, 220, 644, 1069, 1116
BstMAI	GTCTC	5 cut(s)	154, 164, 845, 1098, 1283
BstMBI	GATC	5 cut(s)	179, 217, 641, 1066, 1113
BstMCI	CGRYCG	2 cut(s)	540, 1029
BstMWI	GCNNNNNNNGC	1 cut(s)	1320
BstSCI	CCNGG	2 cut(s)	586, 1325
BstUI	CGCG	1 cut(s)	1178
BstV1I	GCAGC	2 cut(s)	154, 752
BstX2I	RGATCY	1 cut(s)	641
BstYI	RGATCY	1 cut(s)	641
BstZI	CGGCCG	1 cut(s)	1026
Bsu15I	ATCGAT	1 cut(s)	969
BsuI	GTATCC	1 cut(s)	914
BsuRI	GGCC	1 cut(s)	1028
BsuTUI	ATCGAT	1 cut(s)	969
BtgI	CCRYGG	1 cut(s)	1029
BtrI	CACGTC	1 cut(s)	1156
BtsCI	GGATG	1 cut(s)	467
BtsIMutI	CAGTG	2 cut(s)	144, 1209
Cac8I	GCNNGC	1 cut(s)	1125
Cfr10I	RCCGGY	1 cut(s)	1123
Cfr13I	GGNCC	2 cut(s)	331, 668
ClaI	ATCGAT	1 cut(s)	969
CseI	GACGC	1 cut(s)	751
Csp6I	GTAC	5 cut(s)	276, 591, 624, 978, 1023
CspCI	CAANNNNNGTGG	2 cut(s)	601, 636
CviAII	CATG	4 cut(s)	259, 345, 1252, 1315
CviQI	GTAC	5 cut(s)	276, 591, 624, 978, 1023
DdeI	CTNAG	3 cut(s)	34, 1000, 1163
DpnI	GATC	5 cut(s)	181, 219, 643, 1068, 1115
DpnII	GATC	5 cut(s)	179, 217, 641, 1066, 1113
EaeI	YGGCCR	1 cut(s)	1026
EagI	CGGCCG	1 cut(s)	1026
Eam1104I	CTCTTC	1 cut(s)	383
EarI	CTCTTC	1 cut(s)	383
EclXI	CGGCCG	1 cut(s)	1026
Eco130I	CCWWGG	1 cut(s)	772
Eco31I	GGTCTC	1 cut(s)	1283
Eco47I	GGWCC	2 cut(s)	331, 668
Eco52I	CGGCCG	1 cut(s)	1026
Eco57I	CTGAAG	2 cut(s)	51, 1251
Eco88I	CYCGRG	1 cut(s)	848
EcoT14I	CCWWGG	1 cut(s)	772
EcoT22I	ATGCAT	1 cut(s)	1140
ErhI	CCWWGG	1 cut(s)	772
Esp3I	CGTCTC	1 cut(s)	164
FaeI	CATG	4 cut(s)	262, 348, 1255, 1318
FatI	CATG	4 cut(s)	258, 344, 1251, 1314
Fnu4HI	GCNGC	4 cut(s)	168, 247, 607, 741
FokI	GGATG	1 cut(s)	474
Fsp4HI	GCNGC	4 cut(s)	168, 247, 607, 741
FspBI	CTAG	1 cut(s)	773
GluI	GCNGC	4 cut(s)	168, 247, 607, 741
GsaI	CCCAGC	1 cut(s)	691
HaeIII	GGCC	1 cut(s)	1028
HgaI	GACGC	1 cut(s)	751
Hin1II	CATG	4 cut(s)	262, 348, 1255, 1318
HincII	GTYRAC	1 cut(s)	350
HindII	GTYRAC	1 cut(s)	350
HindIII	AAGCTT	1 cut(s)	899
HphI	GGTGA	2 cut(s)	131, 874
Hpy166II	GTNNAC	3 cut(s)	350, 374, 519
Hpy188I	TCNGA	7 cut(s)	154, 179, 448, 656, 662, 1170, 1224
Hpy188III	TCNNGA	7 cut(s)	645, 865, 995, 1002, 1101, 1144, 1183
Hpy8I	GTNNAC	3 cut(s)	350, 374, 519
Hpy99I	CGWCG	5 cut(s)	95, 289, 470, 890, 1157
HpyAV	CCTTC	3 cut(s)	452, 801, 1001
HpyCH4IV	ACGT	2 cut(s)	190, 1155
HpyCH4V	TGCA	2 cut(s)	486, 1138
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1320
HpyF3I	CTNAG	3 cut(s)	34, 1000, 1163
HpySE526I	ACGT	2 cut(s)	190, 1155
Hsp92II	CATG	4 cut(s)	262, 348, 1255, 1318
Kpn2I	TCCGGA	2 cut(s)	644, 1100
KroI	GCCGGC	1 cut(s)	1123
KroNI	GCCGGC	1 cut(s)	1125
Kzo9I	GATC	5 cut(s)	179, 217, 641, 1066, 1113
LmnI	GCTCC	3 cut(s)	575, 1049, 1328
Lsp1109I	GCAGC	2 cut(s)	154, 752
LweI	GCATC	1 cut(s)	452
MaeI	CTAG	1 cut(s)	773
MaeII	ACGT	2 cut(s)	190, 1155
MaeIII	GTNAC	7 cut(s)	107, 317, 356, 494, 729, 880, 1042
MalI	GATC	5 cut(s)	181, 219, 643, 1068, 1115
MboI	GATC	5 cut(s)	179, 217, 641, 1066, 1113
MflI	RGATCY	1 cut(s)	641
MluCI	AATT	3 cut(s)	61, 511, 713
MluI	ACGCGT	1 cut(s)	1176
MlyI	GAGTC	5 cut(s)	104, 651, 803, 992, 1174
MmeI	TCCRAC	1 cut(s)	1247
MnlI	CCTC	8 cut(s)	126, 147, 185, 574, 583, 656, 908, 911
Mph1103I	ATGCAT	1 cut(s)	1140
MroI	TCCGGA	2 cut(s)	644, 1100
MroNI	GCCGGC	1 cut(s)	1123
MroXI	GAANNNNTTC	2 cut(s)	293, 713
MseI	TTAA	5 cut(s)	86, 233, 833, 929, 1082
MspR9I	CCNGG	2 cut(s)	588, 1327
MvnI	CGCG	1 cut(s)	1178
MwoI	GCNNNNNNNGC	1 cut(s)	1320
NaeI	GCCGGC	1 cut(s)	1125
NciI	CCSGG	2 cut(s)	588, 1327
NdeII	GATC	5 cut(s)	179, 217, 641, 1066, 1113
NgoMIV	GCCGGC	1 cut(s)	1123
NlaIII	CATG	4 cut(s)	262, 348, 1255, 1318
NlaIV	GGNNCC	4 cut(s)	332, 571, 643, 778
NmuCI	GTSAC	4 cut(s)	107, 317, 729, 880
NsiI	ATGCAT	1 cut(s)	1140
NspV	TTCGAA	1 cut(s)	630
PcsI	WCGNNNNNNNCGW	2 cut(s)	196, 759
PdiI	GCCGGC	1 cut(s)	1125
PdmI	GAANNNNTTC	2 cut(s)	293, 713
PfeI	GAWTC	8 cut(s)	413, 422, 470, 557, 648, 971, 1037, 1219
PfoI	TCCNGGA	1 cut(s)	1325
PkrI	GCNGC	4 cut(s)	169, 248, 608, 742
PleI	GAGTC	5 cut(s)	104, 651, 803, 992, 1173
PpsI	GAGTC	5 cut(s)	104, 651, 803, 992, 1173
PspFI	CCCAGC	1 cut(s)	687
PspN4I	GGNNCC	4 cut(s)	332, 571, 643, 778
PspPI	GGNCC	2 cut(s)	331, 668
PsuI	RGATCY	1 cut(s)	641
RsaI	GTAC	5 cut(s)	277, 592, 625, 979, 1024
RsaNI	GTAC	5 cut(s)	276, 591, 624, 978, 1023
SaqAI	TTAA	5 cut(s)	86, 233, 833, 929, 1082
SatI	GCNGC	4 cut(s)	168, 247, 607, 741
Sau3AI	GATC	5 cut(s)	179, 217, 641, 1066, 1113
Sau96I	GGNCC	2 cut(s)	331, 668
SchI	GAGTC	5 cut(s)	104, 651, 803, 992, 1174
ScrFI	CCNGG	2 cut(s)	588, 1327
SfaNI	GCATC	1 cut(s)	452
SfuI	TTCGAA	1 cut(s)	630
SinI	GGWCC	2 cut(s)	331, 668
SmlI	CTYRAG	1 cut(s)	1210
SmoI	CTYRAG	1 cut(s)	1210
Sse9I	AATT	3 cut(s)	61, 511, 713
SsiI	CCGC	3 cut(s)	246, 606, 813
SspMI	CTAG	1 cut(s)	773
StyD4I	CCNGG	2 cut(s)	586, 1325
StyI	CCWWGG	1 cut(s)	772
TaiI	ACGT	2 cut(s)	193, 1158
TaqI	TCGA	8 cut(s)	93, 287, 381, 630, 785, 873, 969, 996
TaqII	GACCGA	1 cut(s)	554
TasI	AATT	3 cut(s)	61, 511, 713
TauI	GCSGC	2 cut(s)	249, 609
TfiI	GAWTC	8 cut(s)	413, 422, 470, 557, 648, 971, 1037, 1219
Tru1I	TTAA	5 cut(s)	86, 233, 833, 929, 1082
Tru9I	TTAA	5 cut(s)	86, 233, 833, 929, 1082
TscAI	CASTG	2 cut(s)	151, 1209
TseFI	GTSAC	4 cut(s)	107, 317, 729, 880
TseI	GCWGC	2 cut(s)	167, 740
Tsp45I	GTSAC	4 cut(s)	107, 317, 729, 880
TspDTI	ATGAA	2 cut(s)	247, 1209
TspGWI	ACGGA	2 cut(s)	939, 1260
TspRI	CASTG	2 cut(s)	151, 1209
VpaK11BI	GGWCC	2 cut(s)	331, 668
XapI	RAATTY	1 cut(s)	713
XmaJI	CCTAGG	1 cut(s)	772
XmnI	GAANNNNTTC	2 cut(s)	293, 713
XspI	CTAG	1 cut(s)	773
Zsp2I	ATGCAT	1 cut(s)	1140

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.