Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0006976

Physical Location & Seq

Genomic Coordinates Reverse (-)

66843375 .. 66844937

Gene Structure 1563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00130610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGGCATTAGCAGCTATTCTTGCATGCTTAAGCTTCATTCTTCTCTCATTTTCGGCAGAGGCTAGCTATGCTGGTTTCACTGTTGATCTTATACAGCGCGACTCACCGCTTTCCCCCTGGTACGACTCATCCACCACCCATTTCGACAGCTTGCACAACGCTTTCTGCCGCTCCATCTCACGTGCACATCGTTTCATCAAGCCAAGCACGAATACAATGCAATCCAAAATGGTCCCAACTGGTGGAGAATACTTGATGAACATCTCCATCGGAACCCCACCGGTTGAGGTTCTCGGAATAGCTGACACAGGCAGTGATCTTATCTGGACCCAATGCAAGCCATGCACGCAATGCTTCAACCAAAACCCACCTCTCTTCGATCCTAAGCGCTCCTCCACGTATCGAACCGTCCCCTGTCAGTCCAACTCATGCTCTAATCTTGAAGAAGCCTCTTGCGGTGCGGACCACGGTGACACTTGTGTGTACAGTTATCGTTATGGAGATCGTTCGTTCACTCGGGGGAATCTAGCTCAGGAGACCTTCACCATCGGCTCCGCTTCCGGTCGGTCGGTTTCCCTTCCGAAAATCATTTTCGGTTGTGGACATGAAAACGGTGGCACATTTGATGAGTCCGGCTCCGGCTTGATAGGTCTTGGCGCTGGTCCACTTTCTTTCATTTCTCAACTAAACGGAGGGAAATTTTCCTATTGCTTGGTACCCACGTCAGCTAAATCCTCCGTTGCAAGCAAAATAAGTTTTGGTACTGCCGGAATAGTCTCAGGCAACGGTGCCGTCTCAACTCCTCTAGTTTCCAAAAAACCCAACACTTTCTATTACCTTACTCTTGAAGCAATTAGCGTTGGAGAAAAGAGACTATCCTACAAGACCAGCCAATCCACTAAGGCTGTTGCTGCCAGTTACGGTAGTGAGGGTAACATAATCATCGACTCCGGGACTACGCTGACCTTGCTTCCACCTGGGTTCTACAACGACGTCGTCTCGGCTTTGGAAGTGGCGATTAATGCAGAGCGTGTAAGTGATCCGAAGGGGGTTCTGAATCTTTGTTTTAGAAGCAAAAGTGATCATGACATTGATGTCCCCATTATCACTGCGCATTTTAGTGGTGCTGATGTGAAGTTGAACGCTTTGAACACGTTTGCTAGGGTGGAGGATGATATGGTTTGCTTTACGATGATTCCGTCTGATGATGTGGCGATCTTCGGAAACTTGGCTCAAATGAACTTCCTGGTGGGTTATGACCTTGAGGAAAGTACTGTGTCCTTTAAGCCAGCTGATTGCACCAAGCACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

436

Amino Acids

46.59

Weight (kDa)

5.51

Isoelectric Point (pI)

35.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	83 - 136	1.9e-06	Eukaryotic aspartyl protease
TAXi_N	PF14543	84 - 254	1.1e-55	Xylanase inhibitor N-terminal
Asp	PF00026	139 - 429	3.9e-10	Eukaryotic aspartyl protease
TAXi_C	PF14541	278 - 429	4.5e-27	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31450 AT2G35615
fragaria_vesca	FvH4_1g21300 FvH4_5g24370
malus_domestica	MD06G1021800.v1.1 MD16G1288400.v1.1
prunus_persica	Prupe.5G017100_v2.0.a1
pyrus_communis	pycom06g01570
rosa_chinensis	RchiOBHm_Chr2g0115131 RchiOBHm_Chr7g0214751
rosa_laevigata	RLG00000002724 RLG00000018161
rosa_roxburghii	Rroxscaffold_2G00130610 Rroxscaffold_3G00245120
rosa_rugosa	Rorug02G0193900
rosa_samantha	Rh2AG252400 Rh2BG261900 Rh2CG256900 Rh2DG260600 Rh7AG283700 Rh7BG274400 Rh7CG303100 Rh7DG287100
rosa_wichuraiana	Rw2G019680 Rw7G024190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1094
AatII	GACGTC	1 cut(s)	996
Acc16I	TGCGCA	1 cut(s)	1113
Acc65I	GGTACC	1 cut(s)	715
AccB1I	GGYRCC	2 cut(s)	715, 788
AccB7I	CCANNNNNTGG	1 cut(s)	242
AccBSI	CCGCTC	1 cut(s)	171
AccII	CGCG	1 cut(s)	99
AciI	CCGC	5 cut(s)	107, 169, 456, 461, 555
AclWI	GGATC	2 cut(s)	374, 1034
AcsI	RAATTY	1 cut(s)	698
AcvI	CACGTG	1 cut(s)	182
AcyI	GRCGYC	1 cut(s)	993
AfaI	GTAC	5 cut(s)	122, 485, 717, 763, 1273
AfeI	AGCGCT	1 cut(s)	389
AfiI	CCNNNNNNNGG	1 cut(s)	242
AflII	CTTAAG	1 cut(s)	28
AflIII	ACRYGT	1 cut(s)	1152
AgeI	ACCGGT	1 cut(s)	280
AgsI	TTSAA	5 cut(s)	358, 443, 848, 1141, 1150
AjiI	CACGTC	1 cut(s)	723
AjnI	CCWGG	3 cut(s)	116, 976, 1245
AleI	CACNNNNGTG	1 cut(s)	479
AluBI	AGCT	8 cut(s)	14, 33, 66, 150, 302, 530, 728, 1292
AluI	AGCT	8 cut(s)	14, 33, 66, 150, 302, 530, 728, 1292
Alw21I	GWGCWC	1 cut(s)	187
Alw26I	GTCTC	5 cut(s)	530, 781, 799, 865, 1003
Alw44I	GTGCAC	1 cut(s)	183
AlwI	GGATC	2 cut(s)	374, 1034
Ama87I	CYCGRG	1 cut(s)	516
Aor51HI	AGCGCT	1 cut(s)	389
ApaLI	GTGCAC	1 cut(s)	183
ApeKI	GCWGC	2 cut(s)	11, 911
ApoI	RAATTY	1 cut(s)	698
AseI	ATTAAT	1 cut(s)	1020
AsiGI	ACCGGT	1 cut(s)	280
Asp718I	GGTACC	1 cut(s)	715
AspLEI	GCGC	4 cut(s)	99, 390, 659, 1114
AspS9I	GGNCC	4 cut(s)	232, 327, 463, 662
AsuC2I	CCSGG	1 cut(s)	952
AsuHPI	GGTGA	3 cut(s)	96, 482, 535
AsuNHI	GCTAGC	1 cut(s)	62
AvaI	CYCGRG	1 cut(s)	516
AvaII	GGWCC	4 cut(s)	232, 327, 463, 662
BaeGI	GKGCMC	1 cut(s)	187
BaeI	ACNNNNGTAYC	2 cut(s)	707, 740
BanI	GGYRCC	2 cut(s)	715, 788
BbrPI	CACGTG	1 cut(s)	182
Bbv12I	GWGCWC	1 cut(s)	187
BbvI	GCAGC	2 cut(s)	23, 898
BccI	CCATC	3 cut(s)	182, 275, 554
BceAI	ACGGC	1 cut(s)	776
BcgI	CGANNNNNNTGC	2 cut(s)	199, 233
BciT130I	CCWGG	3 cut(s)	118, 978, 1247
BclI	TGATCA	1 cut(s)	1081
BcnI	CCSGG	1 cut(s)	952
BcoDI	GTCTC	5 cut(s)	530, 781, 799, 865, 1003
BfaI	CTAG	5 cut(s)	63, 527, 806, 1161, 1309
BfoI	RGCGCY	2 cut(s)	391, 660
BfrI	CTTAAG	1 cut(s)	28
BisI	GCNGC	3 cut(s)	12, 169, 912
BlsI	GCNGC	3 cut(s)	13, 170, 913
BmcAI	AGTACT	1 cut(s)	1273
Bme1390I	CCNGG	4 cut(s)	118, 952, 978, 1247
Bme18I	GGWCC	4 cut(s)	232, 327, 463, 662
BmeT110I	CYCGRG	1 cut(s)	516
BmgBI	CACGTC	1 cut(s)	723
BmgT120I	GGNCC	4 cut(s)	232, 327, 463, 662
BmiI	GGNNCC	7 cut(s)	234, 274, 329, 553, 637, 717, 790
BmrFI	CCNGG	4 cut(s)	118, 952, 978, 1247
BmtI	GCTAGC	1 cut(s)	66
BplI	GAGNNNNNCTC	2 cut(s)	620, 652
Bpu10I	CCTNAGC	2 cut(s)	384, 531
BpuEI	CTTGAG	1 cut(s)	1283
BpuMI	CCSGG	1 cut(s)	952
BsaAI	YACGTR	2 cut(s)	182, 399
BsaBI	GATNNNNATC	1 cut(s)	260
BsaHI	GRCGYC	1 cut(s)	993
BsaI	GGTCTC	1 cut(s)	530
BsaJI	CCNNGG	3 cut(s)	116, 466, 977
BsaWI	WCCGGW	2 cut(s)	280, 560
Bsc4I	CCNNNNNNNGG	1 cut(s)	242
Bse118I	RCCGGY	1 cut(s)	280
Bse1I	ACTGG	2 cut(s)	244, 915
Bse3DI	GCAATG	1 cut(s)	356
Bse8I	GATNNNNATC	1 cut(s)	260
BseBI	CCWGG	3 cut(s)	118, 978, 1247
BseDI	CCNNGG	3 cut(s)	116, 466, 977
BseGI	GGATG	2 cut(s)	128, 1177
BseJI	GATNNNNATC	1 cut(s)	260
BseLI	CCNNNNNNNGG	1 cut(s)	242
BseMI	GCAATG	1 cut(s)	356
BseMII	CTCAG	2 cut(s)	545, 792
BseNI	ACTGG	2 cut(s)	244, 915
BseRI	GAGGAG	2 cut(s)	382, 792
BseSI	GKGCMC	1 cut(s)	187
BseXI	GCAGC	2 cut(s)	23, 898
Bsh1236I	CGCG	1 cut(s)	99
Bsh1285I	CGRYCG	2 cut(s)	565, 569
BshNI	GGYRCC	2 cut(s)	715, 788
BshTI	ACCGGT	1 cut(s)	280
BsiEI	CGRYCG	2 cut(s)	565, 569
BsiHKAI	GWGCWC	1 cut(s)	187
BsiHKCI	CYCGRG	1 cut(s)	516
BsiSI	CCGG	6 cut(s)	281, 561, 633, 639, 768, 951
BslFI	GGGAC	4 cut(s)	218, 395, 967, 1082
BslI	CCNNNNNNNGG	1 cut(s)	242
BsmAI	GTCTC	5 cut(s)	530, 781, 799, 865, 1003
BsmBI	CGTCTC	2 cut(s)	799, 1003
BsmFI	GGGAC	4 cut(s)	218, 395, 967, 1082
Bso31I	GGTCTC	1 cut(s)	530
BsoBI	CYCGRG	1 cut(s)	516
Bsp1286I	GDGCHC	1 cut(s)	187
Bsp1407I	TGTACA	1 cut(s)	483
Bsp143I	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
BspACI	CCGC	5 cut(s)	107, 169, 456, 461, 555
BspCNI	CTCAG	2 cut(s)	544, 791
BspFNI	CGCG	1 cut(s)	99
BspHI	TCATGA	1 cut(s)	1084
BspLI	GGNNCC	7 cut(s)	234, 274, 329, 553, 637, 717, 790
BspOI	GCTAGC	1 cut(s)	66
BspPI	GGATC	2 cut(s)	374, 1034
BspT107I	GGYRCC	2 cut(s)	715, 788
BspTI	CTTAAG	1 cut(s)	28
BspTNI	GGTCTC	1 cut(s)	530
BsrBI	CCGCTC	1 cut(s)	171
BsrDI	GCAATG	1 cut(s)	356
BsrFI	RCCGGY	1 cut(s)	280
BsrGI	TGTACA	1 cut(s)	483
BsrI	ACTGG	2 cut(s)	244, 915
BssAI	RCCGGY	1 cut(s)	280
BssECI	CCNNGG	3 cut(s)	116, 466, 977
BssMI	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
BssNI	GRCGYC	1 cut(s)	993
Bst2UI	CCWGG	3 cut(s)	118, 978, 1247
Bst4CI	ACNGT	8 cut(s)	82, 409, 470, 488, 614, 788, 923, 1276
Bst6I	CTCTTC	1 cut(s)	380
BstACI	GRCGYC	1 cut(s)	993
BstAFI	CTTAAG	1 cut(s)	28
BstAPI	GCANNNNNTGC	2 cut(s)	342, 351
BstAUI	TGTACA	1 cut(s)	483
BstBAI	YACGTR	2 cut(s)	182, 399
BstC8I	GCNNGC	7 cut(s)	25, 64, 152, 338, 347, 745, 1290
BstDEI	CTNAG	4 cut(s)	384, 531, 778, 900
BstDSI	CCRYGG	1 cut(s)	466
BstF5I	GGATG	2 cut(s)	128, 1177
BstFNI	CGCG	1 cut(s)	99
BstH2I	RGCGCY	2 cut(s)	391, 660
BstHHI	GCGC	4 cut(s)	99, 390, 659, 1114
BstKTI	GATC	7 cut(s)	88, 319, 382, 505, 1042, 1084, 1218
BstMAI	GTCTC	5 cut(s)	530, 781, 799, 865, 1003
BstMBI	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
BstMCI	CGRYCG	2 cut(s)	565, 569
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 20, 68, 342, 346, 351, 911, 967, 1022
BstNI	CCWGG	3 cut(s)	118, 978, 1247
BstNSI	RCATGY	1 cut(s)	27
BstSCI	CCNGG	4 cut(s)	116, 950, 976, 1245
BstSLI	GKGCMC	1 cut(s)	187
BstUI	CGCG	1 cut(s)	99
BstV1I	GCAGC	2 cut(s)	23, 898
BtgI	CCRYGG	1 cut(s)	466
BtrI	CACGTC	1 cut(s)	723
BtsCI	GGATG	2 cut(s)	128, 1177
BtsI	GCAGTG	2 cut(s)	319, 1107
BtsIMutI	CAGTG	3 cut(s)	78, 319, 1107
Cac8I	GCNNGC	7 cut(s)	25, 64, 152, 338, 347, 745, 1290
CciI	TCATGA	1 cut(s)	1084
CfoI	GCGC	4 cut(s)	99, 390, 659, 1114
Cfr10I	RCCGGY	1 cut(s)	280
Cfr13I	GGNCC	4 cut(s)	232, 327, 463, 662
Csp6I	GTAC	5 cut(s)	121, 484, 716, 762, 1272
CspAI	ACCGGT	1 cut(s)	280
CviAII	CATG	5 cut(s)	24, 342, 429, 605, 1085
CviQI	GTAC	5 cut(s)	121, 484, 716, 762, 1272
DdeI	CTNAG	4 cut(s)	384, 531, 778, 900
DpnI	GATC	7 cut(s)	87, 318, 381, 504, 1041, 1083, 1217
DpnII	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
DrdI	GACNNNNNNGTC	1 cut(s)	1094
DseDI	GACNNNNNNGTC	1 cut(s)	1094
Eam1104I	CTCTTC	1 cut(s)	380
EarI	CTCTTC	1 cut(s)	380
Eco31I	GGTCTC	1 cut(s)	530
Eco47I	GGWCC	4 cut(s)	232, 327, 463, 662
Eco47III	AGCGCT	1 cut(s)	389
Eco72I	CACGTG	1 cut(s)	182
Eco88I	CYCGRG	1 cut(s)	516
EcoRII	CCWGG	3 cut(s)	116, 976, 1245
Esp3I	CGTCTC	2 cut(s)	799, 1003
FaeI	CATG	5 cut(s)	27, 345, 432, 608, 1088
FaqI	GGGAC	4 cut(s)	218, 395, 967, 1082
FatI	CATG	5 cut(s)	23, 341, 428, 604, 1084
FbaI	TGATCA	1 cut(s)	1081
Fnu4HI	GCNGC	3 cut(s)	12, 169, 912
FokI	GGATG	2 cut(s)	115, 1184
Fsp4HI	GCNGC	3 cut(s)	12, 169, 912
FspBI	CTAG	5 cut(s)	63, 527, 806, 1161, 1309
FspI	TGCGCA	1 cut(s)	1113
GlaI	GCGC	4 cut(s)	98, 389, 658, 1113
GluI	GCNGC	3 cut(s)	12, 169, 912
HaeII	RGCGCY	2 cut(s)	391, 660
HapII	CCGG	6 cut(s)	281, 561, 633, 639, 768, 951
HhaI	GCGC	4 cut(s)	99, 390, 659, 1114
Hin1I	GRCGYC	1 cut(s)	993
Hin1II	CATG	5 cut(s)	27, 345, 432, 608, 1088
Hin6I	GCGC	4 cut(s)	97, 388, 657, 1112
HinP1I	GCGC	4 cut(s)	97, 388, 657, 1112
HindIII	AAGCTT	1 cut(s)	31
HinfI	GANTC	7 cut(s)	101, 125, 523, 629, 947, 1057, 1195
HpaII	CCGG	6 cut(s)	281, 561, 633, 639, 768, 951
HphI	GGTGA	3 cut(s)	96, 482, 535
Hpy166II	GTNNAC	5 cut(s)	185, 484, 513, 602, 665
Hpy188I	TCNGA	7 cut(s)	272, 296, 582, 1044, 1056, 1204, 1223
Hpy188III	TCNNGA	5 cut(s)	325, 440, 533, 845, 1085
Hpy8I	GTNNAC	5 cut(s)	185, 484, 513, 602, 665
Hpy99I	CGWCG	2 cut(s)	995, 998
HpyAV	CCTTC	3 cut(s)	550, 587, 1039
HpyCH4III	ACNGT	8 cut(s)	82, 409, 470, 488, 614, 788, 923, 1276
HpyCH4IV	ACGT	5 cut(s)	181, 398, 722, 993, 1154
HpyCH4V	TGCA	9 cut(s)	23, 154, 185, 220, 336, 345, 743, 1025, 1299
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 20, 68, 342, 346, 351, 911, 967, 1022
HpyF3I	CTNAG	4 cut(s)	384, 531, 778, 900
HpySE526I	ACGT	5 cut(s)	181, 398, 722, 993, 1154
Hsp92I	GRCGYC	1 cut(s)	993
Hsp92II	CATG	5 cut(s)	27, 345, 432, 608, 1088
HspAI	GCGC	4 cut(s)	97, 388, 657, 1112
KpnI	GGTACC	1 cut(s)	719
Ksp22I	TGATCA	1 cut(s)	1081
Kzo9I	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
LmnI	GCTCC	4 cut(s)	176, 395, 557, 641
Lsp1109I	GCAGC	2 cut(s)	23, 898
MaeI	CTAG	5 cut(s)	63, 527, 806, 1161, 1309
MaeII	ACGT	5 cut(s)	181, 398, 722, 993, 1154
MaeIII	GTNAC	3 cut(s)	470, 917, 932
MalI	GATC	7 cut(s)	87, 318, 381, 504, 1041, 1083, 1217
MbiI	CCGCTC	1 cut(s)	171
MboI	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
MboII	GAAGA	4 cut(s)	32, 367, 455, 1210
MhlI	GDGCHC	1 cut(s)	187
MluCI	AATT	2 cut(s)	698, 852
MlyI	GAGTC	4 cut(s)	95, 119, 638, 941
MmeI	TCCRAC	2 cut(s)	447, 841
MseI	TTAA	3 cut(s)	29, 1020, 1284
MslI	CAYNNNNRTG	2 cut(s)	479, 1119
MspA1I	CMGCKG	1 cut(s)	1292
MspCI	CTTAAG	1 cut(s)	28
MspI	CCGG	6 cut(s)	281, 561, 633, 639, 768, 951
MspR9I	CCNGG	4 cut(s)	118, 952, 978, 1247
MvaI	CCWGG	3 cut(s)	118, 978, 1247
MvnI	CGCG	1 cut(s)	99
MwoI	GCNNNNNNNGC	9 cut(s)	11, 20, 68, 342, 346, 351, 911, 967, 1022
NciI	CCSGG	1 cut(s)	952
NdeII	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
NheI	GCTAGC	1 cut(s)	62
NlaIII	CATG	5 cut(s)	27, 345, 432, 608, 1088
NlaIV	GGNNCC	7 cut(s)	234, 274, 329, 553, 637, 717, 790
NmeAIII	GCCGAG	1 cut(s)	980
NmuCI	GTSAC	1 cut(s)	470
NsbI	TGCGCA	1 cut(s)	1113
NspI	RCATGY	1 cut(s)	27
OliI	CACNNNNGTG	1 cut(s)	479
PaeI	GCATGC	1 cut(s)	27
PagI	TCATGA	1 cut(s)	1084
PcsI	WCGNNNNNNNCGW	2 cut(s)	187, 1196
PfeI	GAWTC	3 cut(s)	523, 1057, 1195
PflFI	GACNNNGTC	1 cut(s)	995
PflMI	CCANNNNNTGG	1 cut(s)	242
PfoI	TCCNGGA	1 cut(s)	950
PinAI	ACCGGT	1 cut(s)	280
PkrI	GCNGC	3 cut(s)	13, 170, 913
PleI	GAGTC	4 cut(s)	95, 119, 637, 941
PmaCI	CACGTG	1 cut(s)	182
PmlI	CACGTG	1 cut(s)	182
PpsI	GAGTC	4 cut(s)	95, 119, 637, 941
Ppu21I	YACGTR	2 cut(s)	182, 399
PshBI	ATTAAT	1 cut(s)	1020
Psp6I	CCWGG	3 cut(s)	116, 976, 1245
PspCI	CACGTG	1 cut(s)	182
PspGI	CCWGG	3 cut(s)	116, 976, 1245
PspN4I	GGNNCC	7 cut(s)	234, 274, 329, 553, 637, 717, 790
PspPI	GGNCC	4 cut(s)	232, 327, 463, 662
PsyI	GACNNNGTC	1 cut(s)	995
PvuII	CAGCTG	1 cut(s)	1292
RsaI	GTAC	5 cut(s)	122, 485, 717, 763, 1273
RsaNI	GTAC	5 cut(s)	121, 484, 716, 762, 1272
RseI	CAYNNNNRTG	2 cut(s)	479, 1119
SaqAI	TTAA	3 cut(s)	29, 1020, 1284
SatI	GCNGC	3 cut(s)	12, 169, 912
Sau3AI	GATC	7 cut(s)	85, 316, 379, 502, 1039, 1081, 1215
Sau96I	GGNCC	4 cut(s)	232, 327, 463, 662
ScaI	AGTACT	1 cut(s)	1273
SchI	GAGTC	4 cut(s)	95, 119, 638, 941
ScrFI	CCNGG	4 cut(s)	118, 952, 978, 1247
SduI	GDGCHC	1 cut(s)	187
SinI	GGWCC	4 cut(s)	232, 327, 463, 662
SmiMI	CAYNNNNRTG	2 cut(s)	479, 1119
SmlI	CTYRAG	2 cut(s)	28, 1262
SmoI	CTYRAG	2 cut(s)	28, 1262
SphI	GCATGC	1 cut(s)	27
Sse9I	AATT	2 cut(s)	698, 852
SsiI	CCGC	5 cut(s)	107, 169, 456, 461, 555
SspMI	CTAG	5 cut(s)	63, 527, 806, 1161, 1309
StyD4I	CCNGG	4 cut(s)	116, 950, 976, 1245
TaaI	ACNGT	8 cut(s)	82, 409, 470, 488, 614, 788, 923, 1276
TaiI	ACGT	5 cut(s)	184, 401, 725, 996, 1157
TaqI	TCGA	4 cut(s)	144, 378, 403, 945
TaqII	GACCGA	1 cut(s)	555
TasI	AATT	2 cut(s)	698, 852
TatI	WGTACW	2 cut(s)	483, 1271
TauI	GCSGC	1 cut(s)	171
TfiI	GAWTC	3 cut(s)	523, 1057, 1195
Tru1I	TTAA	3 cut(s)	29, 1020, 1284
Tru9I	TTAA	3 cut(s)	29, 1020, 1284
TscAI	CASTG	3 cut(s)	85, 319, 1114
TseFI	GTSAC	1 cut(s)	470
TseI	GCWGC	2 cut(s)	11, 911
Tsp45I	GTSAC	1 cut(s)	470
TspDTI	ATGAA	6 cut(s)	25, 184, 272, 621, 664, 1253
TspGWI	ACGGA	3 cut(s)	705, 727, 1188
TspRI	CASTG	3 cut(s)	85, 319, 1114
Tth111I	GACNNNGTC	1 cut(s)	995
Van91I	CCANNNNNTGG	1 cut(s)	242
Vha464I	CTTAAG	1 cut(s)	28
VneI	GTGCAC	1 cut(s)	183
VpaK11BI	GGWCC	4 cut(s)	232, 327, 463, 662
VspI	ATTAAT	1 cut(s)	1020
XapI	RAATTY	1 cut(s)	698
XceI	RCATGY	1 cut(s)	27
XspI	CTAG	5 cut(s)	63, 527, 806, 1161, 1309
ZraI	GACGTC	1 cut(s)	994
ZrmI	AGTACT	1 cut(s)	1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.