Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006976

Physical Location & Seq

Genomic Coordinates Forward (+)

37943733 .. 37946519

Gene Structure 2787 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00245120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1599 bp

ATGGGGAGCATGGAGGCTATAGCGGGTGCGTGCCTTTGTTTGGATTCGACGTCTGGTGGTGATGACTGGGGCGAGGTGGCTATTGATGACGGAGTCGGAAATGGCAGCATGGATGGGCGAGATGGATGTGGAGGTGGTGGTTGGTGCGACGGCAACGCCGTTGTCTCCATTGCTCCACTCAAACTGTGGATGGACTGGGCCACTTGGGCCTTGTACTGCTTTGTGGGCTTTTTTCTTGGGCTAATTGGATTAGGGAGTGGGAATCCATCTTTGTTGTGGGTTAGAATGGAATTGGTCTTTATGACCCACATGATTTCCACTACTACTACTACTGTAACTGCTATCACCGTCGATCTCATCCACCGCGACTGCCCACTCTCTCCCTTCTACGACTCCTCAACTACCCACTTCGATCGTCTCCGCGACTCCTTCCTCCGCTCCATCGCACGTGCCTCGCGCTTCACACGCCCCACCACCAGCTCCCCAATCGAGTCAAAAGTGATCTCGAGCTCAGGAGAGTATCTCATGAACGTCTCCGTCGGAACCCCACAGGTGGAAGTCCTCGGAATCGTTGACACCGGCAGCGACCTCATCTGGACCCAATGCAAGCCATGCAAGCAGTGCTTCAACCAAAACCCTCCCCTCTTCGACCCAGCTCACTCCTCCACCTACAAAACCCTACCTTGCCAGTCCAGCTCATGCTCCGACCTCGATCAAGCCACCTGCGCCACCGCCGCCGAGTCCTCCAGCGGCCAAGACACGTGCCAGTACAGCTACCGTTACGGAGACCGCTCCTACACACGTGGGAGTCTAGCTCTCGAAACCTTCACCCTCGGATCAACCGCCGGCCATAGGGTCTCGCTTAGGAAGATTGTCTTCGGTTGCGGCCACGAAAATGGCGGCACCTTCGACGAGTCAGGGTCCGGTCTGATCGGGCTCGGTGGCGGCCCACTTTCTTTCATTTCTCAGTTATCAAAATCGGTTAACGGAGGGAAGTTCTCCTATTGCTTGGTTCCTACGGCAGCCAAATCCGATGTAGCGAGCAAGATTAGTTTCGGTACAGCTGGCATTGTCTCCGGTGCCGGCGCCGTTTCGACTCCTTTGGTCTCCAAACAGCCCGACACCTTCTATTACCTCACGCTCGAGGCCATTAGCGTCGGAGAAAAGAAGTTACTCTACAAAAGCCTACCAAACAAGGCCGTCGCCGGAACTGAGGGTAACATTATCATTGACTCCGGGACTACGTTGACGCTGCTCCCACCCGGATTCCACGACGAAGTCGTATCGGCTCTGGAGGCAGCTATTAATGCAGAGCGGGTTAGTGATCCTAGAGGCATTCTGAGTCTCTGCTTTAAGAGCAAGAAAGATGATATTGGTGTTCCGGTTATAACGGCGCATTTTAGCGGCGGCGCCGACGTTAAGTTGAACGCTTTGAACACGTTTGCGAGGGTGGAGGATGATATGGTTTGCTTTACCATGATTCCGTCCGATGACGTTGCGATATTTGGGAACCTGGCTCAGATCAACTTCCTGGTGGGCTATGACATAGAAGAGAGGACTGTTTCCTTCAAGCCAACTGATTGCACTAAGCATCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

532

Amino Acids

56.46

Weight (kDa)

5.0

Isoelectric Point (pI)

29.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	173 - 226	1.4e-06	Eukaryotic aspartyl protease
TAXi_N	PF14543	174 - 353	1.2e-54	Xylanase inhibitor N-terminal
Asp	PF00026	236 - 523	6.6e-10	Eukaryotic aspartyl protease
TAXi_C	PF14541	377 - 524	5.6e-25	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31450 AT2G35615
fragaria_vesca	FvH4_1g21300 FvH4_5g24370
malus_domestica	MD06G1021800.v1.1 MD16G1288400.v1.1
prunus_persica	Prupe.5G017100_v2.0.a1
pyrus_communis	pycom06g01570
rosa_chinensis	RchiOBHm_Chr2g0115131 RchiOBHm_Chr7g0214751
rosa_laevigata	RLG00000002724 RLG00000018161
rosa_roxburghii	Rroxscaffold_2G00130610 Rroxscaffold_3G00245120
rosa_rugosa	Rorug02G0193900
rosa_samantha	Rh2AG252400 Rh2BG261900 Rh2CG256900 Rh2DG260600 Rh7AG283700 Rh7BG274400 Rh7CG303100 Rh7DG287100
rosa_wichuraiana	Rw2G019680 Rw7G024190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1388
AarI	CACCTGC	1 cut(s)	731
AatII	GACGTC	1 cut(s)	53
Acc36I	ACCTGC	1 cut(s)	731
AccB1I	GGYRCC	4 cut(s)	902, 1079, 1085, 1409
AccBSI	CCGCTC	3 cut(s)	438, 792, 1315
AccII	CGCG	3 cut(s)	366, 423, 457
AclWI	GGATC	2 cut(s)	844, 1319
AcoI	YGGCCR	3 cut(s)	751, 847, 886
AcvI	CACGTG	3 cut(s)	449, 762, 803
AcyI	GRCGYC	3 cut(s)	50, 1086, 1410
AfaI	GTAC	3 cut(s)	215, 770, 1060
AfiI	CCNNNNNNNGG	3 cut(s)	40, 553, 852
AflIII	ACRYGT	3 cut(s)	759, 800, 1437
AgsI	TTSAA	4 cut(s)	628, 1426, 1435, 1570
AjnI	CCWGG	2 cut(s)	1512, 1530
AluBI	AGCT	8 cut(s)	480, 510, 656, 696, 774, 815, 1064, 1301
AluI	AGCT	8 cut(s)	480, 510, 656, 696, 774, 815, 1064, 1301
Alw21I	GWGCWC	1 cut(s)	512
Alw26I	GTCTC	8 cut(s)	169, 422, 538, 780, 862, 1078, 1111, 1349
AlwI	GGATC	2 cut(s)	844, 1319
Ama87I	CYCGRG	2 cut(s)	505, 1142
AoxI	GGCC	8 cut(s)	198, 207, 751, 847, 886, 946, 1146, 1197
ApeKI	GCWGC	5 cut(s)	105, 582, 1022, 1252, 1298
AseI	ATTAAT	1 cut(s)	1305
AspLEI	GCGC	5 cut(s)	459, 728, 1088, 1396, 1412
AspS9I	GGNCC	5 cut(s)	198, 207, 597, 921, 947
AsuC2I	CCSGG	2 cut(s)	1237, 1263
AsuHPI	GGTGA	3 cut(s)	71, 337, 820
AvaI	CYCGRG	2 cut(s)	505, 1142
AvaII	GGWCC	2 cut(s)	597, 921
BanI	GGYRCC	4 cut(s)	902, 1079, 1085, 1409
BanII	GRGCYC	2 cut(s)	512, 939
BarI	GAAGNNNNNNTAC	2 cut(s)	1160, 1192
BbrPI	CACGTG	3 cut(s)	449, 762, 803
BbsI	GAAGAC	1 cut(s)	868
Bbv12I	GWGCWC	1 cut(s)	512
BbvI	GCAGC	5 cut(s)	117, 594, 1034, 1239, 1310
BccI	CCATC	5 cut(s)	107, 116, 184, 274, 449
BceAI	ACGGC	6 cut(s)	143, 166, 1035, 1073, 1184, 1407
BcgI	CGANNNNNNTGC	4 cut(s)	435, 469, 1478, 1512
BciT130I	CCWGG	2 cut(s)	1514, 1532
BcnI	CCSGG	2 cut(s)	1237, 1263
BcoDI	GTCTC	8 cut(s)	169, 422, 538, 780, 862, 1078, 1111, 1349
BfaI	CTAG	2 cut(s)	812, 1329
BfmI	CTRYAG	1 cut(s)	18
BfoI	RGCGCY	2 cut(s)	1089, 1413
BfuAI	ACCTGC	1 cut(s)	731
BglI	GCCNNNNNGGC	1 cut(s)	206
Bme1390I	CCNGG	4 cut(s)	1237, 1263, 1514, 1532
Bme18I	GGWCC	2 cut(s)	597, 921
BmeT110I	CYCGRG	2 cut(s)	505, 1142
BmgT120I	GGNCC	5 cut(s)	198, 207, 597, 921, 947
BmiI	GGNNCC	9 cut(s)	544, 599, 904, 922, 1014, 1081, 1087, 1411, 1511
BmrFI	CCNGG	4 cut(s)	1237, 1263, 1514, 1532
BmrI	ACTGGG	2 cut(s)	76, 205
BmuI	ACTGGG	2 cut(s)	76, 205
BpiI	GAAGAC	1 cut(s)	868
BplI	GAGNNNNNCTC	4 cut(s)	507, 539, 799, 831
BpmI	CTGGAG	2 cut(s)	730, 1313
Bpu10I	CCTNAGC	2 cut(s)	511, 863
BpuMI	CCSGG	2 cut(s)	1237, 1263
BsaAI	YACGTR	3 cut(s)	449, 762, 803
BsaHI	GRCGYC	3 cut(s)	50, 1086, 1410
BsaI	GGTCTC	3 cut(s)	780, 862, 1111
BsaJI	CCNNGG	2 cut(s)	562, 832
BsaWI	WCCGGW	3 cut(s)	923, 1076, 1381
Bsc4I	CCNNNNNNNGG	3 cut(s)	40, 553, 852
Bse118I	RCCGGY	3 cut(s)	578, 845, 1082
Bse1I	ACTGG	4 cut(s)	71, 200, 688, 766
Bse3DI	GCAATG	1 cut(s)	168
BseBI	CCWGG	2 cut(s)	1514, 1532
BseDI	CCNNGG	2 cut(s)	562, 832
BseGI	GGATG	5 cut(s)	118, 131, 195, 357, 1462
BseLI	CCNNNNNNNGG	3 cut(s)	40, 553, 852
BseMI	GCAATG	1 cut(s)	168
BseMII	CTCAG	5 cut(s)	525, 980, 1203, 1331, 1532
BseNI	ACTGG	4 cut(s)	71, 200, 688, 766
BseRI	GAGGAG	2 cut(s)	385, 652
BseXI	GCAGC	5 cut(s)	117, 594, 1034, 1239, 1310
BseYI	CCCAGC	1 cut(s)	652
Bsh1236I	CGCG	3 cut(s)	366, 423, 457
Bsh1285I	CGRYCG	1 cut(s)	415
BshFI	GGCC	8 cut(s)	200, 209, 753, 849, 888, 948, 1148, 1199
BshNI	GGYRCC	4 cut(s)	902, 1079, 1085, 1409
BsiEI	CGRYCG	1 cut(s)	415
BsiHKAI	GWGCWC	1 cut(s)	512
BsiHKCI	CYCGRG	2 cut(s)	505, 1142
BsiSI	CCGG	9 cut(s)	579, 846, 924, 1077, 1083, 1206, 1236, 1263, 1382
BslFI	GGGAC	1 cut(s)	1252
BslI	CCNNNNNNNGG	3 cut(s)	40, 553, 852
BsmAI	GTCTC	8 cut(s)	169, 422, 538, 780, 862, 1078, 1111, 1349
BsmBI	CGTCTC	2 cut(s)	422, 538
BsmFI	GGGAC	1 cut(s)	1252
BsmI	GAATGC	1 cut(s)	1335
BsnI	GGCC	8 cut(s)	200, 209, 753, 849, 888, 948, 1148, 1199
Bso31I	GGTCTC	3 cut(s)	780, 862, 1111
BsoBI	CYCGRG	2 cut(s)	505, 1142
Bsp1286I	GDGCHC	2 cut(s)	512, 939
Bsp143I	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
BspANI	GGCC	8 cut(s)	200, 209, 753, 849, 888, 948, 1148, 1199
BspCNI	CTCAG	5 cut(s)	524, 979, 1204, 1332, 1531
BspFNI	CGCG	3 cut(s)	366, 423, 457
BspHI	TCATGA	1 cut(s)	525
BspLI	GGNNCC	9 cut(s)	544, 599, 904, 922, 1014, 1081, 1087, 1411, 1511
BspMI	ACCTGC	1 cut(s)	731
BspPI	GGATC	2 cut(s)	844, 1319
BspT107I	GGYRCC	4 cut(s)	902, 1079, 1085, 1409
BspTNI	GGTCTC	3 cut(s)	780, 862, 1111
BsrBI	CCGCTC	3 cut(s)	438, 792, 1315
BsrDI	GCAATG	1 cut(s)	168
BsrFI	RCCGGY	3 cut(s)	578, 845, 1082
BsrI	ACTGG	4 cut(s)	71, 200, 688, 766
BssAI	RCCGGY	3 cut(s)	578, 845, 1082
BssECI	CCNNGG	2 cut(s)	562, 832
BssMI	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
BssNI	GRCGYC	3 cut(s)	50, 1086, 1410
Bst2UI	CCWGG	2 cut(s)	1514, 1532
Bst4CI	ACNGT	5 cut(s)	186, 334, 349, 779, 1561
Bst6I	CTCTTC	2 cut(s)	650, 1545
BstACI	GRCGYC	3 cut(s)	50, 1086, 1410
BstAPI	GCANNNNNTGC	2 cut(s)	612, 621
BstBAI	YACGTR	3 cut(s)	449, 762, 803
BstC8I	GCNNGC	7 cut(s)	31, 608, 617, 847, 1042, 1066, 1084
BstDEI	CTNAG	7 cut(s)	511, 863, 966, 1212, 1340, 1518, 1587
BstF5I	GGATG	5 cut(s)	118, 131, 195, 357, 1462
BstFNI	CGCG	3 cut(s)	366, 423, 457
BstH2I	RGCGCY	2 cut(s)	1089, 1413
BstHHI	GCGC	5 cut(s)	459, 728, 1088, 1396, 1412
BstKTI	GATC	8 cut(s)	355, 415, 504, 715, 839, 933, 1327, 1524
BstMAI	GTCTC	8 cut(s)	169, 422, 538, 780, 862, 1078, 1111, 1349
BstMBI	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
BstMCI	CGRYCG	1 cut(s)	415
BstNI	CCWGG	2 cut(s)	1514, 1532
BstSCI	CCNGG	4 cut(s)	1235, 1261, 1512, 1530
BstSFI	CTRYAG	1 cut(s)	18
BstUI	CGCG	3 cut(s)	366, 423, 457
BstV1I	GCAGC	5 cut(s)	117, 594, 1034, 1239, 1310
BstV2I	GAAGAC	1 cut(s)	868
BstXI	CCANNNNNNTGG	1 cut(s)	896
BsuRI	GGCC	8 cut(s)	200, 209, 753, 849, 888, 948, 1148, 1199
BtgZI	GCGATG	1 cut(s)	427
BtsCI	GGATG	5 cut(s)	118, 131, 195, 357, 1462
BtsI	GCAGTG	1 cut(s)	626
BtsIMutI	CAGTG	1 cut(s)	626
BveI	ACCTGC	1 cut(s)	731
Cac8I	GCNNGC	7 cut(s)	31, 608, 617, 847, 1042, 1066, 1084
CciI	TCATGA	1 cut(s)	525
CfoI	GCGC	5 cut(s)	459, 728, 1088, 1396, 1412
Cfr10I	RCCGGY	3 cut(s)	578, 845, 1082
Cfr13I	GGNCC	5 cut(s)	198, 207, 597, 921, 947
CseI	GACGC	2 cut(s)	1144, 1258
Csp6I	GTAC	3 cut(s)	214, 769, 1059
CviAII	CATG	7 cut(s)	10, 109, 310, 526, 612, 699, 1477
CviQI	GTAC	3 cut(s)	214, 769, 1059
DdeI	CTNAG	7 cut(s)	511, 863, 966, 1212, 1340, 1518, 1587
DinI	GGCGCC	2 cut(s)	1087, 1411
DpnI	GATC	8 cut(s)	354, 414, 503, 714, 838, 932, 1326, 1523
DpnII	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
EaeI	YGGCCR	3 cut(s)	751, 847, 886
Eam1104I	CTCTTC	2 cut(s)	650, 1545
EarI	CTCTTC	2 cut(s)	650, 1545
Ecl136II	GAGCTC	1 cut(s)	510
Eco24I	GRGCYC	2 cut(s)	512, 939
Eco31I	GGTCTC	3 cut(s)	780, 862, 1111
Eco47I	GGWCC	2 cut(s)	597, 921
Eco53kI	GAGCTC	1 cut(s)	510
Eco72I	CACGTG	3 cut(s)	449, 762, 803
Eco88I	CYCGRG	2 cut(s)	505, 1142
EcoICRI	GAGCTC	1 cut(s)	510
EcoRII	CCWGG	2 cut(s)	1512, 1530
EcoT38I	GRGCYC	2 cut(s)	512, 939
EgeI	GGCGCC	2 cut(s)	1087, 1411
EheI	GGCGCC	2 cut(s)	1087, 1411
Esp3I	CGTCTC	2 cut(s)	422, 538
FaeI	CATG	7 cut(s)	13, 112, 313, 529, 615, 702, 1480
FalI	AAGNNNNNCTT	4 cut(s)	608, 640, 860, 892
FaqI	GGGAC	1 cut(s)	1252
FatI	CATG	7 cut(s)	9, 108, 309, 525, 611, 698, 1476
FauI	CCCGC	2 cut(s)	16, 1308
FokI	GGATG	5 cut(s)	125, 138, 202, 344, 1469
FriOI	GRGCYC	2 cut(s)	512, 939
FspBI	CTAG	2 cut(s)	812, 1329
GlaI	GCGC	5 cut(s)	458, 727, 1087, 1395, 1411
GsaI	CCCAGC	1 cut(s)	656
GsuI	CTGGAG	2 cut(s)	730, 1313
HaeII	RGCGCY	2 cut(s)	1089, 1413
HaeIII	GGCC	8 cut(s)	200, 209, 753, 849, 888, 948, 1148, 1199
HapII	CCGG	9 cut(s)	579, 846, 924, 1077, 1083, 1206, 1236, 1263, 1382
HgaI	GACGC	2 cut(s)	1144, 1258
HhaI	GCGC	5 cut(s)	459, 728, 1088, 1396, 1412
Hin1I	GRCGYC	3 cut(s)	50, 1086, 1410
Hin1II	CATG	7 cut(s)	13, 112, 313, 529, 615, 702, 1480
Hin6I	GCGC	5 cut(s)	457, 726, 1086, 1394, 1410
HinP1I	GCGC	5 cut(s)	457, 726, 1086, 1394, 1410
HincII	GTYRAC	3 cut(s)	574, 985, 1248
HindII	GTYRAC	3 cut(s)	574, 985, 1248
HpaI	GTTAAC	1 cut(s)	985
HpaII	CCGG	9 cut(s)	579, 846, 924, 1077, 1083, 1206, 1236, 1263, 1382
HphI	GGTGA	3 cut(s)	71, 337, 820
Hpy166II	GTNNAC	3 cut(s)	574, 985, 1248
Hpy188III	TCNNGA	6 cut(s)	505, 513, 526, 595, 818, 1292
Hpy8I	GTNNAC	3 cut(s)	574, 985, 1248
Hpy99I	CGWCG	9 cut(s)	52, 152, 353, 542, 914, 1160, 1205, 1277, 1418
HpyAV	CCTTC	6 cut(s)	394, 439, 835, 916, 1135, 1576
HpyCH4III	ACNGT	5 cut(s)	186, 334, 349, 779, 1561
HpyCH4IV	ACGT	9 cut(s)	50, 448, 531, 761, 802, 1244, 1416, 1439, 1494
HpyCH4V	TGCA	4 cut(s)	606, 615, 1310, 1584
HpyF3I	CTNAG	7 cut(s)	511, 863, 966, 1212, 1340, 1518, 1587
HpySE526I	ACGT	9 cut(s)	50, 448, 531, 761, 802, 1244, 1416, 1439, 1494
Hsp92I	GRCGYC	3 cut(s)	50, 1086, 1410
Hsp92II	CATG	7 cut(s)	13, 112, 313, 529, 615, 702, 1480
HspAI	GCGC	5 cut(s)	457, 726, 1086, 1394, 1410
KasI	GGCGCC	2 cut(s)	1085, 1409
KroI	GCCGGC	2 cut(s)	845, 1082
KroNI	GCCGGC	2 cut(s)	847, 1084
KspAI	GTTAAC	1 cut(s)	985
Kzo9I	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
LmnI	GCTCC	7 cut(s)	6, 178, 443, 485, 707, 797, 1260
Lsp1109I	GCAGC	5 cut(s)	117, 594, 1034, 1239, 1310
MaeI	CTAG	2 cut(s)	812, 1329
MaeII	ACGT	9 cut(s)	50, 448, 531, 761, 802, 1244, 1416, 1439, 1494
MaeIII	GTNAC	4 cut(s)	334, 779, 1170, 1217
MalI	GATC	8 cut(s)	354, 414, 503, 714, 838, 932, 1326, 1523
MbiI	CCGCTC	3 cut(s)	438, 792, 1315
MboI	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
MboII	GAAGA	4 cut(s)	637, 868, 880, 1562
MhlI	GDGCHC	2 cut(s)	512, 939
MluCI	AATT	2 cut(s)	243, 290
Mly113I	GGCGCC	2 cut(s)	1086, 1410
MmeI	TCCRAC	4 cut(s)	76, 520, 729, 1138
MroNI	GCCGGC	2 cut(s)	845, 1082
MseI	TTAA	4 cut(s)	984, 1305, 1353, 1419
MslI	CAYNNNNRTG	1 cut(s)	894
MspA1I	CMGCKG	2 cut(s)	750, 1064
MspI	CCGG	9 cut(s)	579, 846, 924, 1077, 1083, 1206, 1236, 1263, 1382
MspR9I	CCNGG	4 cut(s)	1237, 1263, 1514, 1532
Mva1269I	GAATGC	1 cut(s)	1335
MvaI	CCWGG	2 cut(s)	1514, 1532
MvnI	CGCG	3 cut(s)	366, 423, 457
NaeI	GCCGGC	2 cut(s)	847, 1084
NarI	GGCGCC	2 cut(s)	1086, 1410
NciI	CCSGG	2 cut(s)	1237, 1263
NdeII	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
NgoMIV	GCCGGC	2 cut(s)	845, 1082
NlaIII	CATG	7 cut(s)	13, 112, 313, 529, 615, 702, 1480
NlaIV	GGNNCC	9 cut(s)	544, 599, 904, 922, 1014, 1081, 1087, 1411, 1511
NmeAIII	GCCGAG	1 cut(s)	763
PaeR7I	CTCGAG	2 cut(s)	505, 1142
PagI	TCATGA	1 cut(s)	525
PaqCI	CACCTGC	1 cut(s)	731
PcsI	WCGNNNNNNNCGW	2 cut(s)	156, 1278
PctI	GAATGC	1 cut(s)	1335
PdiI	GCCGGC	2 cut(s)	847, 1084
PfeI	GAWTC	5 cut(s)	44, 262, 567, 1266, 1480
PflFI	GACNNNGTC	2 cut(s)	92, 1277
PfoI	TCCNGGA	1 cut(s)	1235
Ple19I	CGATCG	1 cut(s)	415
PluTI	GGCGCC	2 cut(s)	1089, 1413
PmaCI	CACGTG	3 cut(s)	449, 762, 803
PmlI	CACGTG	3 cut(s)	449, 762, 803
Ppu21I	YACGTR	3 cut(s)	449, 762, 803
PshBI	ATTAAT	1 cut(s)	1305
PsiI	TTATAA	1 cut(s)	1388
Psp124BI	GAGCTC	1 cut(s)	512
Psp6I	CCWGG	2 cut(s)	1512, 1530
PspCI	CACGTG	3 cut(s)	449, 762, 803
PspFI	CCCAGC	1 cut(s)	652
PspGI	CCWGG	2 cut(s)	1512, 1530
PspN4I	GGNNCC	9 cut(s)	544, 599, 904, 922, 1014, 1081, 1087, 1411, 1511
PspPI	GGNCC	5 cut(s)	198, 207, 597, 921, 947
PspXI	VCTCGAGB	1 cut(s)	1142
PsyI	GACNNNGTC	2 cut(s)	92, 1277
PvuI	CGATCG	1 cut(s)	415
PvuII	CAGCTG	1 cut(s)	1064
RsaI	GTAC	3 cut(s)	215, 770, 1060
RsaNI	GTAC	3 cut(s)	214, 769, 1059
RseI	CAYNNNNRTG	1 cut(s)	894
SacI	GAGCTC	1 cut(s)	512
SaqAI	TTAA	4 cut(s)	984, 1305, 1353, 1419
Sau3AI	GATC	8 cut(s)	352, 412, 501, 712, 836, 930, 1324, 1521
Sau96I	GGNCC	5 cut(s)	198, 207, 597, 921, 947
ScrFI	CCNGG	4 cut(s)	1237, 1263, 1514, 1532
SduI	GDGCHC	2 cut(s)	512, 939
SfcI	CTRYAG	1 cut(s)	18
SfiI	GGCCNNNNNGGCC	1 cut(s)	206
SfoI	GGCGCC	2 cut(s)	1087, 1411
Sfr274I	CTCGAG	2 cut(s)	505, 1142
SinI	GGWCC	2 cut(s)	597, 921
SlaI	CTCGAG	2 cut(s)	505, 1142
SmiMI	CAYNNNNRTG	1 cut(s)	894
SmlI	CTYRAG	2 cut(s)	505, 1142
SmoI	CTYRAG	2 cut(s)	505, 1142
Sse9I	AATT	2 cut(s)	243, 290
SspDI	GGCGCC	2 cut(s)	1085, 1409
SspMI	CTAG	2 cut(s)	812, 1329
SstI	GAGCTC	1 cut(s)	512
StyD4I	CCNGG	4 cut(s)	1235, 1261, 1512, 1530
TaaI	ACNGT	5 cut(s)	186, 334, 349, 779, 1561
TaiI	ACGT	9 cut(s)	53, 451, 534, 764, 805, 1247, 1419, 1442, 1497
TasI	AATT	2 cut(s)	243, 290
TatI	WGTACW	2 cut(s)	213, 768
TauI	GCSGC	7 cut(s)	737, 753, 888, 903, 948, 1407, 1410
TfiI	GAWTC	5 cut(s)	44, 262, 567, 1266, 1480
Tru1I	TTAA	4 cut(s)	984, 1305, 1353, 1419
Tru9I	TTAA	4 cut(s)	984, 1305, 1353, 1419
TscAI	CASTG	1 cut(s)	626
TseI	GCWGC	5 cut(s)	105, 582, 1022, 1252, 1298
TspDTI	ATGAA	2 cut(s)	542, 949
TspGWI	ACGGA	5 cut(s)	105, 526, 798, 1002, 1473
TspRI	CASTG	1 cut(s)	626
Tth111I	GACNNNGTC	2 cut(s)	92, 1277
VpaK11BI	GGWCC	2 cut(s)	597, 921
VspI	ATTAAT	1 cut(s)	1305
XcmI	CCANNNNNNNNNTGG	2 cut(s)	183, 273
XhoI	CTCGAG	2 cut(s)	505, 1142
XspI	CTAG	2 cut(s)	812, 1329
ZraI	GACGTC	1 cut(s)	51

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.