Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0006976

Physical Location & Seq

Genomic Coordinates Reverse (-)

26364866 .. 26366414

Gene Structure 1549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G019680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGGCATTAGCAGCTATTCTTGCATGCTTAAGCTTCATTCTTCTCTCATTTTCGGCAGAGGCTAGCTATGGTGGTTTCACTGTTGATCTTATACAGCGCGACTCACCGCTTTCCCCCTGGTACGACTCATCCACCACCCATTTCGACAGCTTGCACAACGCTTTCCGCCGCTCCATCTCACGTGCACATCGTTTCATCAAGCCAAGCACGAATACAATCGAATCCAAAATAGTCCCAAGTGGTGGAGAATACTTGATGAACATCTCCATGGGAACCCCACCGGTTGAGGTTCTCGGAATAGCTGATACAGGAAGTGATCTTGTCTGGACCCAATGCAAGCCATGCACGCAATGCTTCAACCAAAACCCACCTCTCTTCGATCCTAAGCGCTCCTCCACGTATCGAACCGTCCCCTGTCAGTCCAACTCATGCTCCAATCTTGAAGAAGCCTCTTGCGGTGTGTACGGTGGGGACCACGGTGACACTTGTGTGTACAGTTATCGTTATGGAGATCGTTCGTTCACTCGGGGGAGTCTAGCTCAGGAGACCATCACCATCGGCTCCGCTTCCGGTCGGCCGGTTTCCCTTCCGAAAATCATTTTCGGTTGTGGACATGAAAACGGTGGCACATTTGATGAGTCCGGCTCCGGCTTGATCGGTCTTGGCGCTGGTCCACTTTCTTTCATTTCTCAACTAAACGGAGGGAAATTTTCCTATTGCTTGGTACCCACGTCAGCTAAATCCTCCGTTGCAAGCAAAATAAGTTTTGGTACTGCCGGAATAGTTTCAGGCAACGGTGCCGTCTCAACTCCTCTAGTTTCCAAACAACCCAACACGTTCTATTACCTCACTCTTGAAGCAATTAGCGTTGGAGAAAAGAGACTATCCTACAAGACCAGCCAATCCACTAAGGCTGTTGCTGCCAGTTACGGTAGTGAGGGTAACATAATCATCGACTCCGGGACTAAGCTGACCTTGCTTCCACCTGGGGTCTACAACGACGTCGTCTCGGCTTTGGAAGTGGTGATTAATGCAGAGCGTGTTAGTGATCCGAAGGGGGTTCTGAGTCTTTGTTTTAGAAGCAAAAGTGATCATGACATTGATGTCCCCGTTATCACTGCGCATTTTAGTGGTGCTGATGTGAAGTTGAACGCTTTGAACACGTTTGCTAGGGTGGAGGATGATATGGTTTGCCTTACGATGATTCCGTCTGATGACGTGGCGATCTTCGGAAACTTGGCTCAAATGAACTTCCTGGTGGGTTATGACCTTGAGGAAAGTACTGTGTCCTTTAAGCCAGCTGATTGCACCAAGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004190 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009056 GO:0009057 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0070001 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04071 ko04138 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04138 map04140 map04142 map04210 map04915 map05152

Pfam Domains

Protein Families

TAXi_C TAXi_N

Protein Analysis

439

Amino Acids

46.77

Weight (kDa)

5.52

Isoelectric Point (pI)

36.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asp	PF00026	83 - 136	8e-06	Eukaryotic aspartyl protease
TAXi_N	PF14543	84 - 257	6.5e-54	Xylanase inhibitor N-terminal
Asp	PF00026	166 - 432	2.7e-09	Eukaryotic aspartyl protease
TAXi_C	PF14541	281 - 432	8.3e-28	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31450 AT2G35615
fragaria_vesca	FvH4_1g21300 FvH4_5g24370
malus_domestica	MD06G1021800.v1.1 MD16G1288400.v1.1
prunus_persica	Prupe.5G017100_v2.0.a1
pyrus_communis	pycom06g01570
rosa_chinensis	RchiOBHm_Chr2g0115131 RchiOBHm_Chr7g0214751
rosa_laevigata	RLG00000002724 RLG00000018161
rosa_roxburghii	Rroxscaffold_2G00130610 Rroxscaffold_3G00245120
rosa_rugosa	Rorug02G0193900
rosa_samantha	Rh2AG252400 Rh2BG261900 Rh2CG256900 Rh2DG260600 Rh7AG283700 Rh7BG274400 Rh7CG303100 Rh7DG287100
rosa_wichuraiana	Rw2G019680 Rw7G024190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1103
AatII	GACGTC	1 cut(s)	1005
Acc16I	TGCGCA	1 cut(s)	1122
Acc65I	GGTACC	1 cut(s)	724
AccB1I	GGYRCC	2 cut(s)	724, 797
AccB7I	CCANNNNNTGG	1 cut(s)	242
AccBSI	CCGCTC	1 cut(s)	171
AccI	GTMKAC	1 cut(s)	993
AccII	CGCG	1 cut(s)	99
AciI	CCGC	5 cut(s)	107, 166, 169, 456, 564
AclWI	GGATC	2 cut(s)	374, 1043
AcoI	YGGCCR	1 cut(s)	575
AcsI	RAATTY	1 cut(s)	707
AcvI	CACGTG	1 cut(s)	182
AcyI	GRCGYC	1 cut(s)	1002
AfaI	GTAC	6 cut(s)	122, 464, 494, 726, 772, 1282
AfeI	AGCGCT	1 cut(s)	389
AfiI	CCNNNNNNNGG	1 cut(s)	242
AflII	CTTAAG	1 cut(s)	28
AflIII	ACRYGT	2 cut(s)	834, 1161
AgeI	ACCGGT	1 cut(s)	280
AgsI	TTSAA	5 cut(s)	358, 443, 857, 1150, 1159
AjiI	CACGTC	2 cut(s)	732, 1219
AjnI	CCWGG	3 cut(s)	116, 985, 1254
AleI	CACNNNNGTG	1 cut(s)	488
AluBI	AGCT	9 cut(s)	14, 33, 66, 150, 302, 539, 737, 970, 1301
AluI	AGCT	9 cut(s)	14, 33, 66, 150, 302, 539, 737, 970, 1301
Alw21I	GWGCWC	1 cut(s)	187
Alw26I	GTCTC	4 cut(s)	539, 808, 874, 1012
Alw44I	GTGCAC	1 cut(s)	183
AlwI	GGATC	2 cut(s)	374, 1043
Ama87I	CYCGRG	1 cut(s)	525
Aor51HI	AGCGCT	1 cut(s)	389
AoxI	GGCC	1 cut(s)	575
ApaLI	GTGCAC	1 cut(s)	183
ApeKI	GCWGC	2 cut(s)	11, 920
ApoI	RAATTY	1 cut(s)	707
AseI	ATTAAT	1 cut(s)	1029
AsiGI	ACCGGT	1 cut(s)	280
Asp700I	GAANNNNTTC	1 cut(s)	784
Asp718I	GGTACC	1 cut(s)	724
AspLEI	GCGC	4 cut(s)	99, 390, 668, 1123
AspS9I	GGNCC	3 cut(s)	327, 472, 671
AsuC2I	CCSGG	1 cut(s)	961
AsuHPI	GGTGA	4 cut(s)	96, 491, 544, 1036
AsuNHI	GCTAGC	1 cut(s)	62
AvaI	CYCGRG	1 cut(s)	525
AvaII	GGWCC	3 cut(s)	327, 472, 671
BaeGI	GKGCMC	1 cut(s)	187
BaeI	ACNNNNGTAYC	2 cut(s)	716, 749
BanI	GGYRCC	2 cut(s)	724, 797
BbrPI	CACGTG	1 cut(s)	182
Bbv12I	GWGCWC	1 cut(s)	187
BbvI	GCAGC	2 cut(s)	23, 907
BccI	CCATC	3 cut(s)	182, 557, 563
BceAI	ACGGC	1 cut(s)	785
BciT130I	CCWGG	3 cut(s)	118, 987, 1256
BclI	TGATCA	1 cut(s)	1090
BcnI	CCSGG	1 cut(s)	961
BcoDI	GTCTC	4 cut(s)	539, 808, 874, 1012
BfaI	CTAG	4 cut(s)	63, 536, 815, 1170
BfoI	RGCGCY	2 cut(s)	391, 669
BfrI	CTTAAG	1 cut(s)	28
BisI	GCNGC	3 cut(s)	12, 169, 921
BlsI	GCNGC	3 cut(s)	13, 170, 922
BmcAI	AGTACT	1 cut(s)	1282
Bme1390I	CCNGG	4 cut(s)	118, 961, 987, 1256
Bme18I	GGWCC	3 cut(s)	327, 472, 671
BmeT110I	CYCGRG	1 cut(s)	525
BmgBI	CACGTC	2 cut(s)	732, 1219
BmgT120I	GGNCC	3 cut(s)	327, 472, 671
BmiI	GGNNCC	7 cut(s)	274, 329, 473, 562, 646, 726, 799
BmrFI	CCNGG	4 cut(s)	118, 961, 987, 1256
BmtI	GCTAGC	1 cut(s)	66
BplI	GAGNNNNNCTC	4 cut(s)	523, 555, 629, 661
Bpu10I	CCTNAGC	2 cut(s)	384, 540
BpuEI	CTTGAG	1 cut(s)	1292
BpuMI	CCSGG	1 cut(s)	961
BsaAI	YACGTR	2 cut(s)	182, 399
BsaBI	GATNNNNATC	1 cut(s)	260
BsaHI	GRCGYC	1 cut(s)	1002
BsaI	GGTCTC	1 cut(s)	539
BsaJI	CCNNGG	4 cut(s)	116, 267, 475, 986
BsaWI	WCCGGW	2 cut(s)	280, 569
BsaXI	ACNNNNNCTCC	2 cut(s)	416, 446
Bsc4I	CCNNNNNNNGG	1 cut(s)	242
Bse118I	RCCGGY	2 cut(s)	280, 577
Bse1I	ACTGG	1 cut(s)	924
Bse3DI	GCAATG	1 cut(s)	356
Bse8I	GATNNNNATC	1 cut(s)	260
BseBI	CCWGG	3 cut(s)	118, 987, 1256
BseDI	CCNNGG	4 cut(s)	116, 267, 475, 986
BseGI	GGATG	2 cut(s)	128, 1186
BseJI	GATNNNNATC	1 cut(s)	260
BseLI	CCNNNNNNNGG	1 cut(s)	242
BseMI	GCAATG	1 cut(s)	356
BseMII	CTCAG	2 cut(s)	554, 1055
BseNI	ACTGG	1 cut(s)	924
BseRI	GAGGAG	2 cut(s)	382, 801
BseSI	GKGCMC	1 cut(s)	187
BseX3I	CGGCCG	1 cut(s)	575
BseXI	GCAGC	2 cut(s)	23, 907
Bsh1236I	CGCG	1 cut(s)	99
Bsh1285I	CGRYCG	2 cut(s)	574, 578
BshFI	GGCC	1 cut(s)	577
BshNI	GGYRCC	2 cut(s)	724, 797
BshTI	ACCGGT	1 cut(s)	280
BsiEI	CGRYCG	2 cut(s)	574, 578
BsiHKAI	GWGCWC	1 cut(s)	187
BsiHKCI	CYCGRG	1 cut(s)	525
BsiSI	CCGG	7 cut(s)	281, 570, 578, 642, 648, 777, 960
BslFI	GGGAC	5 cut(s)	218, 395, 485, 976, 1091
BslI	CCNNNNNNNGG	1 cut(s)	242
BsmAI	GTCTC	4 cut(s)	539, 808, 874, 1012
BsmBI	CGTCTC	2 cut(s)	808, 1012
BsmFI	GGGAC	5 cut(s)	218, 395, 485, 976, 1091
BsnI	GGCC	1 cut(s)	577
Bso31I	GGTCTC	1 cut(s)	539
BsoBI	CYCGRG	1 cut(s)	525
Bsp1286I	GDGCHC	1 cut(s)	187
Bsp1407I	TGTACA	1 cut(s)	492
Bsp143I	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
Bsp19I	CCATGG	1 cut(s)	267
BspACI	CCGC	5 cut(s)	107, 166, 169, 456, 564
BspANI	GGCC	1 cut(s)	577
BspCNI	CTCAG	2 cut(s)	553, 1056
BspFNI	CGCG	1 cut(s)	99
BspHI	TCATGA	1 cut(s)	1093
BspLI	GGNNCC	7 cut(s)	274, 329, 473, 562, 646, 726, 799
BspOI	GCTAGC	1 cut(s)	66
BspPI	GGATC	2 cut(s)	374, 1043
BspT107I	GGYRCC	2 cut(s)	724, 797
BspTI	CTTAAG	1 cut(s)	28
BspTNI	GGTCTC	1 cut(s)	539
BsrBI	CCGCTC	1 cut(s)	171
BsrDI	GCAATG	1 cut(s)	356
BsrFI	RCCGGY	2 cut(s)	280, 577
BsrGI	TGTACA	1 cut(s)	492
BsrI	ACTGG	1 cut(s)	924
BssAI	RCCGGY	2 cut(s)	280, 577
BssECI	CCNNGG	4 cut(s)	116, 267, 475, 986
BssMI	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
BssNI	GRCGYC	1 cut(s)	1002
BssT1I	CCWWGG	1 cut(s)	267
Bst2UI	CCWGG	3 cut(s)	118, 987, 1256
Bst4CI	ACNGT	9 cut(s)	82, 409, 467, 479, 497, 623, 797, 932, 1285
Bst6I	CTCTTC	1 cut(s)	380
BstACI	GRCGYC	1 cut(s)	1002
BstAFI	CTTAAG	1 cut(s)	28
BstAPI	GCANNNNNTGC	2 cut(s)	342, 351
BstAUI	TGTACA	1 cut(s)	492
BstBAI	YACGTR	2 cut(s)	182, 399
BstC8I	GCNNGC	7 cut(s)	25, 64, 152, 338, 347, 754, 1299
BstDEI	CTNAG	5 cut(s)	384, 540, 909, 966, 1064
BstDSI	CCRYGG	2 cut(s)	267, 475
BstF5I	GGATG	2 cut(s)	128, 1186
BstFNI	CGCG	1 cut(s)	99
BstH2I	RGCGCY	2 cut(s)	391, 669
BstHHI	GCGC	4 cut(s)	99, 390, 668, 1123
BstKTI	GATC	8 cut(s)	88, 319, 382, 514, 657, 1051, 1093, 1227
BstMAI	GTCTC	4 cut(s)	539, 808, 874, 1012
BstMBI	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
BstMCI	CGRYCG	2 cut(s)	574, 578
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 20, 342, 346, 351, 920, 976
BstNI	CCWGG	3 cut(s)	118, 987, 1256
BstNSI	RCATGY	1 cut(s)	27
BstSCI	CCNGG	4 cut(s)	116, 959, 985, 1254
BstSLI	GKGCMC	1 cut(s)	187
BstUI	CGCG	1 cut(s)	99
BstV1I	GCAGC	2 cut(s)	23, 907
BstZI	CGGCCG	1 cut(s)	575
BsuRI	GGCC	1 cut(s)	577
BtgI	CCRYGG	2 cut(s)	267, 475
BtrI	CACGTC	2 cut(s)	732, 1219
BtsCI	GGATG	2 cut(s)	128, 1186
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	2 cut(s)	78, 1116
Cac8I	GCNNGC	7 cut(s)	25, 64, 152, 338, 347, 754, 1299
CciI	TCATGA	1 cut(s)	1093
CfoI	GCGC	4 cut(s)	99, 390, 668, 1123
Cfr10I	RCCGGY	2 cut(s)	280, 577
Cfr13I	GGNCC	3 cut(s)	327, 472, 671
Csp6I	GTAC	6 cut(s)	121, 463, 493, 725, 771, 1281
CspAI	ACCGGT	1 cut(s)	280
CviAII	CATG	6 cut(s)	24, 268, 342, 429, 614, 1094
CviQI	GTAC	6 cut(s)	121, 463, 493, 725, 771, 1281
DdeI	CTNAG	5 cut(s)	384, 540, 909, 966, 1064
DpnI	GATC	8 cut(s)	87, 318, 381, 513, 656, 1050, 1092, 1226
DpnII	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
DrdI	GACNNNNNNGTC	1 cut(s)	1103
DseDI	GACNNNNNNGTC	1 cut(s)	1103
EaeI	YGGCCR	1 cut(s)	575
EagI	CGGCCG	1 cut(s)	575
Eam1104I	CTCTTC	1 cut(s)	380
EarI	CTCTTC	1 cut(s)	380
EciI	GGCGGA	1 cut(s)	155
EclXI	CGGCCG	1 cut(s)	575
Eco130I	CCWWGG	1 cut(s)	267
Eco31I	GGTCTC	1 cut(s)	539
Eco47I	GGWCC	3 cut(s)	327, 472, 671
Eco47III	AGCGCT	1 cut(s)	389
Eco52I	CGGCCG	1 cut(s)	575
Eco72I	CACGTG	1 cut(s)	182
Eco88I	CYCGRG	1 cut(s)	525
EcoRII	CCWGG	3 cut(s)	116, 985, 1254
EcoT14I	CCWWGG	1 cut(s)	267
ErhI	CCWWGG	1 cut(s)	267
Esp3I	CGTCTC	2 cut(s)	808, 1012
FaeI	CATG	6 cut(s)	27, 271, 345, 432, 617, 1097
FalI	AAGNNNNNCTT	2 cut(s)	959, 991
FaqI	GGGAC	5 cut(s)	218, 395, 485, 976, 1091
FatI	CATG	6 cut(s)	23, 267, 341, 428, 613, 1093
FbaI	TGATCA	1 cut(s)	1090
FblI	GTMKAC	1 cut(s)	993
Fnu4HI	GCNGC	3 cut(s)	12, 169, 921
FokI	GGATG	2 cut(s)	115, 1193
Fsp4HI	GCNGC	3 cut(s)	12, 169, 921
FspBI	CTAG	4 cut(s)	63, 536, 815, 1170
FspI	TGCGCA	1 cut(s)	1122
GlaI	GCGC	4 cut(s)	98, 389, 667, 1122
GluI	GCNGC	3 cut(s)	12, 169, 921
HaeII	RGCGCY	2 cut(s)	391, 669
HaeIII	GGCC	1 cut(s)	577
HapII	CCGG	7 cut(s)	281, 570, 578, 642, 648, 777, 960
HhaI	GCGC	4 cut(s)	99, 390, 668, 1123
Hin1I	GRCGYC	1 cut(s)	1002
Hin1II	CATG	6 cut(s)	27, 271, 345, 432, 617, 1097
Hin6I	GCGC	4 cut(s)	97, 388, 666, 1121
HinP1I	GCGC	4 cut(s)	97, 388, 666, 1121
HindIII	AAGCTT	1 cut(s)	31
HinfI	GANTC	8 cut(s)	101, 125, 221, 532, 638, 956, 1066, 1204
HpaII	CCGG	7 cut(s)	281, 570, 578, 642, 648, 777, 960
HphI	GGTGA	4 cut(s)	96, 491, 544, 1036
Hpy166II	GTNNAC	7 cut(s)	185, 463, 493, 522, 611, 674, 994
Hpy188I	TCNGA	6 cut(s)	296, 591, 1053, 1065, 1213, 1232
Hpy188III	TCNNGA	5 cut(s)	325, 440, 542, 854, 1094
Hpy8I	GTNNAC	7 cut(s)	185, 463, 493, 522, 611, 674, 994
Hpy99I	CGWCG	2 cut(s)	1004, 1007
HpyAV	CCTTC	2 cut(s)	596, 1048
HpyCH4III	ACNGT	9 cut(s)	82, 409, 467, 479, 497, 623, 797, 932, 1285
HpyCH4IV	ACGT	7 cut(s)	181, 398, 731, 836, 1002, 1163, 1218
HpyCH4V	TGCA	8 cut(s)	23, 154, 185, 336, 345, 752, 1034, 1308
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 20, 342, 346, 351, 920, 976
HpyF3I	CTNAG	5 cut(s)	384, 540, 909, 966, 1064
HpySE526I	ACGT	7 cut(s)	181, 398, 731, 836, 1002, 1163, 1218
Hsp92I	GRCGYC	1 cut(s)	1002
Hsp92II	CATG	6 cut(s)	27, 271, 345, 432, 617, 1097
HspAI	GCGC	4 cut(s)	97, 388, 666, 1121
KpnI	GGTACC	1 cut(s)	728
Ksp22I	TGATCA	1 cut(s)	1090
Kzo9I	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
LmnI	GCTCC	5 cut(s)	176, 395, 437, 566, 650
Lsp1109I	GCAGC	2 cut(s)	23, 907
MaeI	CTAG	4 cut(s)	63, 536, 815, 1170
MaeII	ACGT	7 cut(s)	181, 398, 731, 836, 1002, 1163, 1218
MaeIII	GTNAC	3 cut(s)	479, 926, 941
MalI	GATC	8 cut(s)	87, 318, 381, 513, 656, 1050, 1092, 1226
MbiI	CCGCTC	1 cut(s)	171
MboI	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
MboII	GAAGA	4 cut(s)	32, 367, 455, 1219
MhlI	GDGCHC	1 cut(s)	187
MluCI	AATT	2 cut(s)	707, 861
MlyI	GAGTC	6 cut(s)	95, 119, 541, 647, 950, 1075
MmeI	TCCRAC	2 cut(s)	447, 850
MroXI	GAANNNNTTC	1 cut(s)	784
MseI	TTAA	3 cut(s)	29, 1029, 1293
MslI	CAYNNNNRTG	3 cut(s)	266, 488, 1128
MspA1I	CMGCKG	1 cut(s)	1301
MspCI	CTTAAG	1 cut(s)	28
MspI	CCGG	7 cut(s)	281, 570, 578, 642, 648, 777, 960
MspR9I	CCNGG	4 cut(s)	118, 961, 987, 1256
MvaI	CCWGG	3 cut(s)	118, 987, 1256
MvnI	CGCG	1 cut(s)	99
MwoI	GCNNNNNNNGC	7 cut(s)	11, 20, 342, 346, 351, 920, 976
NciI	CCSGG	1 cut(s)	961
NcoI	CCATGG	1 cut(s)	267
NdeII	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
NheI	GCTAGC	1 cut(s)	62
NlaIII	CATG	6 cut(s)	27, 271, 345, 432, 617, 1097
NlaIV	GGNNCC	7 cut(s)	274, 329, 473, 562, 646, 726, 799
NmeAIII	GCCGAG	1 cut(s)	989
NmuCI	GTSAC	1 cut(s)	479
NsbI	TGCGCA	1 cut(s)	1122
NspI	RCATGY	1 cut(s)	27
OliI	CACNNNNGTG	1 cut(s)	488
PaeI	GCATGC	1 cut(s)	27
PagI	TCATGA	1 cut(s)	1093
PcsI	WCGNNNNNNNCGW	2 cut(s)	187, 1205
PdmI	GAANNNNTTC	1 cut(s)	784
PfeI	GAWTC	2 cut(s)	221, 1204
PflFI	GACNNNGTC	1 cut(s)	1004
PflMI	CCANNNNNTGG	1 cut(s)	242
PfoI	TCCNGGA	1 cut(s)	959
PinAI	ACCGGT	1 cut(s)	280
PkrI	GCNGC	3 cut(s)	13, 170, 922
PleI	GAGTC	6 cut(s)	95, 119, 540, 646, 950, 1074
PmaCI	CACGTG	1 cut(s)	182
PmlI	CACGTG	1 cut(s)	182
PpsI	GAGTC	6 cut(s)	95, 119, 540, 646, 950, 1074
Ppu21I	YACGTR	2 cut(s)	182, 399
PshBI	ATTAAT	1 cut(s)	1029
Psp6I	CCWGG	3 cut(s)	116, 985, 1254
PspCI	CACGTG	1 cut(s)	182
PspGI	CCWGG	3 cut(s)	116, 985, 1254
PspN4I	GGNNCC	7 cut(s)	274, 329, 473, 562, 646, 726, 799
PspPI	GGNCC	3 cut(s)	327, 472, 671
PsyI	GACNNNGTC	1 cut(s)	1004
PvuII	CAGCTG	1 cut(s)	1301
RsaI	GTAC	6 cut(s)	122, 464, 494, 726, 772, 1282
RsaNI	GTAC	6 cut(s)	121, 463, 493, 725, 771, 1281
RseI	CAYNNNNRTG	3 cut(s)	266, 488, 1128
SaqAI	TTAA	3 cut(s)	29, 1029, 1293
SatI	GCNGC	3 cut(s)	12, 169, 921
Sau3AI	GATC	8 cut(s)	85, 316, 379, 511, 654, 1048, 1090, 1224
Sau96I	GGNCC	3 cut(s)	327, 472, 671
ScaI	AGTACT	1 cut(s)	1282
SchI	GAGTC	6 cut(s)	95, 119, 541, 647, 950, 1075
ScrFI	CCNGG	4 cut(s)	118, 961, 987, 1256
SduI	GDGCHC	1 cut(s)	187
SinI	GGWCC	3 cut(s)	327, 472, 671
SmiMI	CAYNNNNRTG	3 cut(s)	266, 488, 1128
SmlI	CTYRAG	2 cut(s)	28, 1271
SmoI	CTYRAG	2 cut(s)	28, 1271
SphI	GCATGC	1 cut(s)	27
Sse9I	AATT	2 cut(s)	707, 861
SsiI	CCGC	5 cut(s)	107, 166, 169, 456, 564
SspMI	CTAG	4 cut(s)	63, 536, 815, 1170
StyD4I	CCNGG	4 cut(s)	116, 959, 985, 1254
StyI	CCWWGG	1 cut(s)	267
TaaI	ACNGT	9 cut(s)	82, 409, 467, 479, 497, 623, 797, 932, 1285
TaiI	ACGT	7 cut(s)	184, 401, 734, 839, 1005, 1166, 1221
TaqI	TCGA	5 cut(s)	144, 219, 378, 403, 954
TaqII	GACCGA	1 cut(s)	647
TasI	AATT	2 cut(s)	707, 861
TatI	WGTACW	2 cut(s)	492, 1280
TauI	GCSGC	1 cut(s)	171
TfiI	GAWTC	2 cut(s)	221, 1204
Tru1I	TTAA	3 cut(s)	29, 1029, 1293
Tru9I	TTAA	3 cut(s)	29, 1029, 1293
TscAI	CASTG	2 cut(s)	85, 1123
TseFI	GTSAC	1 cut(s)	479
TseI	GCWGC	2 cut(s)	11, 920
Tsp45I	GTSAC	1 cut(s)	479
TspDTI	ATGAA	6 cut(s)	25, 184, 272, 630, 673, 1262
TspGWI	ACGGA	3 cut(s)	714, 736, 1197
TspRI	CASTG	2 cut(s)	85, 1123
Tth111I	GACNNNGTC	1 cut(s)	1004
Van91I	CCANNNNNTGG	1 cut(s)	242
Vha464I	CTTAAG	1 cut(s)	28
VneI	GTGCAC	1 cut(s)	183
VpaK11BI	GGWCC	3 cut(s)	327, 472, 671
VspI	ATTAAT	1 cut(s)	1029
XapI	RAATTY	1 cut(s)	707
XceI	RCATGY	1 cut(s)	27
XmiI	GTMKAC	1 cut(s)	993
XmnI	GAANNNNTTC	1 cut(s)	784
XspI	CTAG	4 cut(s)	63, 536, 815, 1170
ZraI	GACGTC	1 cut(s)	1003
ZrmI	AGTACT	1 cut(s)	1282

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.